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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:chromosome 3 mutant
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Accession:RS:0002742 term browser browse the term


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F344-AcoxlTn(sb-T2/Bart3)2.342Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-AcoxlTn(sb-T2/Bart3)2.342Mcwi IEA RGD NCBI chr 3:120,414,311...120,724,809 JBrowse link
F344-AdaTn(sb-T2/Bart3)2.237Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-AdaTn(sb-T2/Bart3)2.237Mcwi IEA RGD NCBI chr 3:160,115,840...160,139,947 JBrowse link
F344-Ano3Tn(sb-T2/Bart3)2.307Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Ano3Tn(sb-T2/Bart3)2.307Mcwi IEA RGD NCBI chr 3:101,843,516...102,203,368 JBrowse link
F344-AsipATyrCKitH/Kyo term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-AsipATyrCKitH/Kyo IEA RGD NCBI chr14:35,072,131...35,149,638
NCBI chr 3:150,492,010...150,579,870
NCBI chr 1:151,012,598...151,106,802
JBrowse link
F344-AW915325Tn(sb-T2/Bart3)2.319Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-AW915325Tn(sb-T2/Bart3)2.319Mcwi IEA RGD
F344-AW921689Tn(sb-T2/Bart3)2.209Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-AW921689Tn(sb-T2/Bart3)2.209Mcwi IEA RGD
F344-BE329202Tn(sb-T2/Bart3)2.198Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-BE329202Tn(sb-T2/Bart3)2.198Mcwi IEA RGD
F344-BF522453Tn(sb-T2/Bart3)2.166Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-BF522453Tn(sb-T2/Bart3)2.166Mcwi IEA RGD
F344-BI284934Tn(sb-T2/Bart3)2.185Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-BI284934Tn(sb-T2/Bart3)2.185Mcwi IEA RGD
F344-BI284938Tn(sb-T2/Bart3)2.155Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-BI284938Tn(sb-T2/Bart3)2.155Mcwi IEA RGD
F344-BI284938Tn(sb-T2/Bart3)2.187Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-BI284938Tn(sb-T2/Bart3)2.187Mcwi IEA RGD
F344-BI285110Tn(sb-T2/Bart3)2.167Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-BI285110Tn(sb-T2/Bart3)2.167Mcwi IEA RGD
F344-BI285226Tn(sb-T2/Bart3)2.193Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-BI285226Tn(sb-T2/Bart3)2.193Mcwi IEA RGD
F344-BI285226Tn(sb-T2/Bart3)2.194Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-BI285226Tn(sb-T2/Bart3)2.194Mcwi IEA RGD
F344-BQ195794Tn(sb-T2/Bart3)2.182Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-BQ195794Tn(sb-T2/Bart3)2.182Mcwi IEA RGD
F344-CA338503Tn(sb-T2/Bart3)2.168Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-CA338503Tn(sb-T2/Bart3)2.168Mcwi IEA RGD
F344-CA338503Tn(sb-T2/Bart3)2.175Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-CA338503Tn(sb-T2/Bart3)2.175Mcwi IEA RGD
F344-CA338503Tn(sb-T2/Bart3)2.196Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-CA338503Tn(sb-T2/Bart3)2.196Mcwi IEA RGD
F344-CB706876Tn(sb-T2/Bart3)2.181Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-CB706876Tn(sb-T2/Bart3)2.181Mcwi IEA RGD
F344-Cst3Tn(sb-T2/Bart3)2.172Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Cst3Tn(sb-T2/Bart3)2.172Mcwi IEA RGD NCBI chr 3:143,219,671...143,223,544 JBrowse link
F344-CyssTn(sb-T2/Bart3)2.173Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-CyssTn(sb-T2/Bart3)2.173Mcwi IEA RGD NCBI chr 3:144,427,430...144,431,768 JBrowse link
F344-Dpp4DPPIV-/DchcHsdRrrc term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Dpp4DPPIV-/DchcHsdRrrc IEA RGD NCBI chr 3:48,291,055...48,372,672 JBrowse link
F344-Entpd6Tn(sb-T2/Bart3)2.174Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Entpd6Tn(sb-T2/Bart3)2.174Mcwi IEA RGD NCBI chr 3:146,546,424...146,568,828 JBrowse link
F344-Immp1lTn(sb-T2/Bart3)2.246Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Immp1lTn(sb-T2/Bart3)2.246Mcwi IEA RGD NCBI chr 3:95,955,126...96,024,316 JBrowse link
F344-Kcnh7Tn(sb-T2/Bart3)2.295Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Kcnh7Tn(sb-T2/Bart3)2.295Mcwi IEA RGD NCBI chr 3:48,662,450...49,168,716 JBrowse link
F344-Kif16bTn(sb-T2/Bart3)2.200Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Kif16bTn(sb-T2/Bart3)2.200Mcwi IEA RGD NCBI chr 3:136,596,621...136,936,809 JBrowse link
F344-LOC681893Tn(sb-T2/Bart3)2.159Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-LOC681893Tn(sb-T2/Bart3)2.159Mcwi IEA RGD
F344-LOC681893Tn(sb-T2/Bart3)2.161Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-LOC681893Tn(sb-T2/Bart3)2.161Mcwi IEA RGD
F344-Lrrc4cTn(sb-T2/Bart3)2.224Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Lrrc4cTn(sb-T2/Bart3)2.224Mcwi IEA RGD NCBI chr 3:85,421,169...86,821,783 JBrowse link
F344-Lrrc4cTn(sb-T2/Bart3)2.254Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Lrrc4cTn(sb-T2/Bart3)2.254Mcwi IEA RGD NCBI chr 3:85,421,169...86,821,783 JBrowse link
F344-NapbTn(sb-T2/Bart3)2.162Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-NapbTn(sb-T2/Bart3)2.162Mcwi IEA RGD NCBI chr 3:143,017,571...143,063,904 JBrowse link
F344-Nfe2l2em1Kyo term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Nfe2l2em1Kyo IEA RGD NCBI chr 3:62,497,568...62,525,146 JBrowse link
F344-Nfe2l2em2Kyo term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Nfe2l2em2Kyo IEA RGD NCBI chr 3:62,497,568...62,525,146 JBrowse link
F344-Prr5lTn(sb-T2/Bart3)2.228Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Prr5lTn(sb-T2/Bart3)2.228Mcwi IEA RGD NCBI chr 3:91,290,207...91,461,208 JBrowse link
F344-PtpraTn(sb-T2/Bart3)2.261Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-PtpraTn(sb-T2/Bart3)2.261Mcwi IEA RGD NCBI chr 3:122,976,066...123,084,585 JBrowse link
F344-Rapgef4Tn(sb-T2/Bart3)2.314Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Rapgef4Tn(sb-T2/Bart3)2.314Mcwi IEA RGD NCBI chr 3:58,632,338...58,925,127 JBrowse link
F344-RGD1311344Tn(sb-T2/Bart3)2.164Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Dzank1Tn(sb-T2/Bart3)2.164Mcwi IEA RGD NCBI chr 3:138,624,517...138,684,530 JBrowse link
F344-RGD1564304Tn(sb-T2/Bart3)2.201Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-RGD1564304Tn(sb-T2/Bart3)2.201Mcwi IEA RGD
F344-Scn1am1Kyo term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Scn1am1Kyo IEA RGD NCBI chr 3:52,388,811...52,533,365 JBrowse link
F344-Scn1am1Kyo.GRY-Cacna1agry/Okym term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Cacna1agryScn1am1Kyo/Okym IEA RGD NCBI chr19:25,453,236...25,749,550
NCBI chr 3:52,388,811...52,533,365
JBrowse link
F344-Scn1am2Kyo term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Scn1am2Kyo IEA RGD NCBI chr 3:52,388,811...52,533,365 JBrowse link
F344-Slc24a3Tn(sb-T2/Bart3)2.178Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Slc24a3Tn(sb-T2/Bart3)2.178Mcwi IEA RGD NCBI chr 3:139,333,942...139,835,728 JBrowse link
F344-Slc24a3Tn(sb-T2/Bart3)2.188Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Slc24a3Tn(sb-T2/Bart3)2.188Mcwi IEA RGD NCBI chr 3:139,333,942...139,835,728 JBrowse link
F344-SnphTn(sb-T2/Bart3)2.214Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-SnphTn(sb-T2/Bart3)2.214Mcwi IEA RGD NCBI chr 3:147,102,394...147,143,576 JBrowse link
F344-Sptlc3Tn(sb-T2/Bart3)2.147Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Sptlc3Tn(sb-T2/Bart3)2.147Mcwi IEA RGD NCBI chr 3:132,560,437...132,689,313 JBrowse link
F344-Syndig1Tn(sb-T2/Bart3)2.171Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Syndig1Tn(sb-T2/Bart3)2.171Mcwi IEA RGD NCBI chr 3:145,031,427...145,199,273 JBrowse link
F344-Tasp1Tn(sb-T2/Bart3)2.219Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Tasp1Tn(sb-T2/Bart3)2.219Mcwi IEA RGD NCBI chr 3:132,888,785...133,131,213 JBrowse link
F344-Zeb2em1Kyo term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S F344-Zeb2em1Kyo IEA RGD
FHH-Chr 3BN-Helz2em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S FHH-Chr 3BN-Helz2em3Mcwi IEA RGD NCBI chr 3:176,730,024...176,744,382 JBrowse link
FHH-Chr 3BN-Helz2em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S FHH-Chr 3BN-Helz2em4Mcwi IEA RGD NCBI chr 3:176,730,024...176,744,382 JBrowse link
FHH-Maddm1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S FHH-Maddm1Mcwi IEA RGD NCBI chr 3:79,960,301...80,003,023 JBrowse link
LEW-Rag1em1Ztm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S LEW-Rag1em1Ztm IEA RGD NCBI chr 3:91,206,394...91,217,491 JBrowse link
SD-Nfe2l2em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nfe2l2em1Mcwi IEA RGD NCBI chr 3:62,497,568...62,525,146 JBrowse link
SD-Nfe2l2em1Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nfe2l2em1Mcwi+/+ SD-Nfe2l2em1Mcwi+/Nfe2l2em1Mcwi+ IEA RGD
SD-Nfe2l2em1Mcwi+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nfe2l2em1Mcwi+/- SD-Nfe2l2em1Mcwi+/Nfe2l2em1Mcwi- IEA RGD
SD-Nfe2l2em1Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nfe2l2em1Mcwi-/- SD-Nfe2l2em1Mcwi-/Nfe2l2em1Mcwi- IEA RGD NCBI chr 3:62,497,568...62,525,146 JBrowse link
SD-Pax6Sey2Mce term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Pax6Sey2/Mce IEA RGD NCBI chr 3:95,700,241...95,728,682 JBrowse link
SD-Pax6SeyMce term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Pax6Sey/Mce IEA RGD NCBI chr 3:95,700,241...95,728,682 JBrowse link
SD-Rag1em1Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag1em1Ang IEA RGD NCBI chr 3:91,206,394...91,217,491 JBrowse link
SS-Cst3em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Cst3em1Mcwi IEA RGD NCBI chr 3:143,219,671...143,223,544 JBrowse link
SS-Cst3em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Cst3em3Mcwi IEA RGD NCBI chr 3:143,219,671...143,223,544 JBrowse link
SS-Mmp9em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Mmp9em4Mcwi IEA RGD NCBI chr 3:161,413,410...161,421,473 JBrowse link
SS-Mmp9em6Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Mmp9em6Mcwi IEA RGD NCBI chr 3:161,413,410...161,421,473 JBrowse link
SS-Prex1em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Prex1em2Mcwi IEA RGD NCBI chr 3:163,329,580...163,477,822 JBrowse link
SS-Prex1em2Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Prex1em2Mcwi-/- SS-Prex1em2Mcwi-/Prex1em2Mcwi- IEA RGD
SS-Rag1em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Rag1em1Mcwi IEA RGD NCBI chr 3:91,206,394...91,217,491 JBrowse link
SS-Rag1em1Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Rag1em1Mcwi+/+ SS-Rag1em1Mcwi+/Rag1em1Mcwi+ IEA RGD
SS-Rag1em1Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Rag1em1Mcwi-/- SS-Rag1em1Mcwi-/Rag1em1Mcwi- IEA RGD
SS-Rag1em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Rag1em2Mcwi IEA RGD NCBI chr 3:91,206,394...91,217,491 JBrowse link
SS-Rag1em2Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Rag1em2Mcwi+/+ SS-Rag1em2Mcwi+/Rag1em2Mcwi+ IEA RGD
SS-Rag1em2Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Rag1em2Mcwi-/- SS-Rag1em2Mcwi-/Rag1em2Mcwi- IEA RGD
SS-Stk39em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Stk39em2Mcwi IEA RGD NCBI chr 3:54,359,449...54,625,702 JBrowse link
SS-Stk39em2Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Stk39em2Mcwi+/+ SS-Stk39em2Mcwi+/Stk39em2Mcwi+ IEA RGD
SS-Stk39em2Mcwi-/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Stk39em2Mcwi-/+ SS-Stk39em2Mcwi-/Stk39em2Mcwi+ IEA RGD NCBI chr 3:54,359,449...54,625,702 JBrowse link
SS-Stk39em2Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Stk39em2Mcwi-/- SS-Stk39em2Mcwi-/Stk39em2Mcwi- IEA RGD NCBI chr 3:54,359,449...54,625,702 JBrowse link
SS-Stk39em5Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Stk39em5Mcwi IEA RGD NCBI chr 3:54,359,449...54,625,702 JBrowse link
SS-Stk39em6Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Stk39em6Mcwi IEA RGD NCBI chr 3:54,359,449...54,625,702 JBrowse link
SS-Thbdm1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Thbdm1Mcwi IEA RGD NCBI chr 3:142,748,673...142,752,325 JBrowse link
ZI/Kyo term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S ZI/Kyo IEA RGD NCBI chr 3:123,434,409...123,567,922 JBrowse link
ZIMY/Kyo term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S ZIMY/Kyo Zitter Masao Yamada IEA RGD NCBI chr 3:123,434,409...123,567,922 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6335
    chromosome altered 2392
      chromosome 3 187
        chromosome 3 mutant 80
          Crl:SD (TALEN) mutants (chr 3) + 4
          F344 mutants (chr 3) + 48
          FHH-Chr 3BN/Mcwi (CRISPR/Cas9) mutants (chr 3) + 2
          FHH/EurMcwi (ENU) mutants (chr 3) + 1
          LEW-Rag1em1Ztm 1
          LEW/Crl (CRISPR/Cas9) mutants (chr 3) 0
          SD-Pax6Sey2Mce 1
          SD-Pax6SeyMce 1
          SD-Rag1em1Ang 1
          SS/JrHsdMcwi (CRISPR/Cas9) mutants (chr 3) + 4
          SS/JrHsdMcwi (ENU) mutants (chr 3) + 1
          SS/JrHsdMcwi (ZFN) mutants (chr 3) + 14
          ZI/Kyo + 2
paths to the root