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RAT STRAINS - ANNOTATIONS
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The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (
https://rgd.mcw.edu/rgdweb/contact/contactus.html
).
Term:
chromosome 9 congenic
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Accession:
RS:0002316
browse the term
show annotations for term's descendants Sort by:
symbol
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evidence
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Rat (77 )
Mouse (0 )
Human (0 )
Chinchilla (0 )
Bonobo (0 )
Dog (0 )
Squirrel (0 )
Pig (0 )
Green Monkey (0)
Naked Mole-rat (0 )
All
QTL (11)
Strains (66)
SS.SHR-(D9Mco110-D9Got111)/Bj
Symbol
Object Name
Evidence
rsID
P Value
LOD Score
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
Q
Bp394
Blood pressure QTL 394
IEA
RGD
PMID:27113531
RGD:11353859
NCBI chr 9:44,649,921...89,649,921
Q
Pur33
Proteinuria QTL 33
IEA
RGD
PMID:27113531
RGD:11353859
NCBI chr 9:44,649,921...89,649,921
SS.SHR-(D9Mco113-D9Mco124)/Bj
Symbol
Object Name
Evidence
rsID
P Value
LOD Score
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
Q
Bmd92
Bone mineral density QTL 92
IEA
0.01
RGD
PMID:27113531
RGD:11353859
NCBI chr 9:46,114,199...91,114,199
SS.SHR-(D9Mco72-D9Mco105)/Mco
Symbol
Object Name
Evidence
rsID
P Value
LOD Score
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
Q
Bp356
Blood pressure QTL 356
IEA
0.001
RGD
PMID:21814219
RGD:6903249
NCBI chr 9:47,902,208...52,283,252
Q
Bp392
Blood pressure QTL 392
IEA
RGD
PMID:27113531
RGD:11353859
NCBI chr 9:7,283,252...52,283,252
SS.SHR-(D9Rat7-D9Mco93)/Mco
Symbol
Object Name
Evidence
rsID
P Value
LOD Score
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
Q
Bp334
Blood pressure QTL 334
IEA
0.01
3.7
RGD
PMID:18854752
RGD:2302803
NCBI chr 9:79,271,511...91,616,855
SS.SHR-(D9Rat7-D9Rat84)/Mco
Symbol
Object Name
Evidence
rsID
P Value
LOD Score
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
Q
Bp393
Blood pressure QTL 393
IEA
RGD
PMID:27113531
RGD:11353859
NCBI chr 9:40,194,188...85,194,188
Q
Pur31
Proteinuria QTL 31
IEA
0.036
RGD
PMID:21814219
RGD:6903249
NCBI chr 9:40,194,188...85,194,188
SS.SHR-(D9Wox16-D9Mco85)/Mco
Symbol
Object Name
Evidence
rsID
P Value
LOD Score
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
Q
Bp333
Blood pressure QTL 333
IEA
0.001
RGD
PMID:18854752
RGD:2302803
NCBI chr 9:56,627,713...78,595,166
SS.SHR-(D9Wox16-D9Rat64)/Mco
Symbol
Object Name
Evidence
rsID
P Value
LOD Score
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
Q
Uae34
Urinary albumin excretion QTL 34
IEA
RGD
PMID:16534143
RGD:1578520
NCBI chr 9:62,072,275...96,470,995
SS.SR-(D9Mco95-Resp18)/Mco
Symbol
Object Name
Evidence
rsID
P Value
LOD Score
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
Q
Bp284
Blood pressure QTL 284
IEA
RGD
PMID:15655120
RGD:1334447
NCBI chr 9:76,650,629...76,771,824
SS.SR-(D9Rat69-D9Mco14)/Mco
Symbol
Object Name
Evidence
rsID
P Value
LOD Score
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
Q
Bp284
Blood pressure QTL 284
IEA
RGD
PMID:15655120
RGD:1334447
NCBI chr 9:76,650,629...76,771,824
Term paths to the root
one shortest
all shortest
one longest
all longest
one shortest and longest
all
Path 1
Term
Annotations
rat strain
6770
chromosome altered
2410
chromosome 9
96
chromosome 9 congenic
77
BN.LEW-(D9Got8-D9Got200)/Rj
1
DA.PVG.1AV1-(D9Wox24-D9Rat44)/Kini
1
DA/ZtmKini.BN/Rj (chr 9)
+
8
F344.OLETF (chr 9)
+
3
FHH.PCK-(D9Rat35-D9Rat70)/Mcwi
1
LEW/Rj.BN/Rj (chr 9)
+
2
OLETF.F344-(D9Mgh8-D9Mit2)/Tj
1
SD.Gunn-Ugt1a1j/Aon
1
SHRSP/IzmTkyo.WKY/Izm (chr 9)
+
1
SHRSP/Tkyo.WKY/Tkyo (chr 9)
+
1
SS/Jr.SHR/NHsd (chr 9)
+
34
SS/Jr.SR/Jr (chr 9)
+
19
TM.KDP-Cblb(D9Rat13-D9Rat4)(D12Rat5-D12Rat45)(D18Mit9-D18Rat44)/Nyo
1
W.Gunn-Ugt1a1j/Aon
1
WKY/Izm.SHRSP/Izm (chr 9)
+
2