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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:consomic strain
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Accession:RS:0000460 term browser browse the term
Definition:Consomic strains are produced by repeated backcrossing of a whole chromosome onto an inbred (background) strain. \ninbred strain


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FHH-Chr 1BN/Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf55 Renal function QTL 55 IEA RGD PMID:16303858 RGD:1579884 NCBI chr 1:238,824,734...279,986,079 JBrowse link
MWF-Chr 6SHR/Rkb term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Uae37 Urinary albumin excretion QTL 37 IEA RGD PMID:17953514 RGD:1642911 NCBI chr 6:68,781,170...147,991,367 JBrowse link
SS.BN-(2340-RN34_13048990782)/Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp396 Blood pressure QTL 396 IEA RGD PMID:23460292 RGD:12802369 NCBI chr13:51,080,989...96,080,989 JBrowse link
SS.BN-(D13Hmgc64-RN34_13048990782)/Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp328 Blood pressure QTL 328 IEA RGD PMID:17566075 RGD:1625678 NCBI chr13:46,444,570...50,799,665 JBrowse link
Q Mcs27 Mammary carcinoma susceptibility QTL 27 IEA RGD PMID:20737482 RGD:4143380 NCBI chr13:48,776,655...53,264,877 JBrowse link
SS.BN-(D13Rat111-D13Got22)/Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp327 Blood pressure QTL 327 IEA RGD PMID:17566075 RGD:1625678 NCBI chr13:35,301,263...46,444,796 JBrowse link
SS.BN-(D13Rat111-D13Hmgc85)/Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp401 Blood pressure QTL 401 IEA RGD PMID:21257920 RGD:12798539 NCBI chr13:42,155,543...44,588,509 JBrowse link
SS.BN-(D13Rat124-D13Rat101)/Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp399 Blood pressure QTL 399 IEA RGD PMID:23817491 RGD:12802368 NCBI chr13:50,609,228...53,264,877 JBrowse link
SS.BN-(D13Rat151-D13Rat197)/Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp329 Blood pressure QTL 329 IEA RGD PMID:17566075 RGD:1625678 NCBI chr13:63,611,283...79,034,003 JBrowse link
Q Bp400 Blood pressure QTL 400 IEA RGD PMID:20009007 RGD:9831392 NCBI chr13:66,971,778...111,971,778 JBrowse link
SS.BN-(D13Rat20-D13Got22)/Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp401 Blood pressure QTL 401 IEA RGD PMID:21257920 RGD:12798539 NCBI chr13:42,155,543...44,588,509 JBrowse link
SS.BN-(D13Rat25-RN34_13048990782)/Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp395 Blood pressure QTL 395 IEA RGD PMID:23460292 RGD:12802369 NCBI chr13:49,994,708...51,081,193 JBrowse link
SS.BN-(D13Rat25-rs106935835)/Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp398 Blood pressure QTL 398 IEA RGD PMID:23817491 RGD:12802368 NCBI chr13:50,896,091...50,918,009 JBrowse link
SS.BN-(D13Rat25-rs198199323)/Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp397 Blood pressure QTL 397 IEA RGD PMID:23817491 RGD:12802368 NCBI chr13:50,260,357...50,897,964 JBrowse link
SS.BN-(D13Rat7-D13Rat60)/Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp326 Blood pressure QTL 326 IEA RGD PMID:17566075 RGD:1625678 NCBI chr13:14,279,081...26,919,398 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6179
    consomic strain 177
      BN-LH/Mav Consomics + 3
      BN-SS/Mcwi Consomics + 2
      CDS-Chr 4CDR/Ygl 1
      COP-Chr 16DA/McoRrrc 1
      F344-Chr 15OLETF/Tj 1
      F344-Chr 3SDT/Nyo 1
      FHH-BN/Mcwi Consomics + 23
      LEW-Chr YF344-Tg(Cyp1a1-Ren2)10/Jmul 1
      LH-Chr 13BN/Mav + 2
      LH-Chr 17BN/Mav + 2
      LH-Chr 17LN/Aek + 5
      MWF-SHR/Rkb Consomics + 4
      OLETF-Chr 14F344/Tj 1
      SBH-SBN Consomics + 5
      SBN-SBH Consomics + 2
      SHR-Chr YBN/Cub 1
      SHR-Chr YW/K 1
      SHR-Chr YWKY/Akr 1
      SHR-MWF Consomics + 2
      SHR/Tkyo-WKY/Tkyo Consomics + 6
      SHRSP-Chr 1F344/Rkb 1
      SHRSP/Tkyo-WKY/Tkyo Consomics + 6
      SS-Chr 19SHR/Rkb 1
      SS-Chr BN/Mcwi Consomics + 104
      WKY-Chr YSHR/Akr 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.