PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: nicotinamide adenine dinucleotide metabolic pathway
Accession: PW:0002580
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Definition: Those metabolic reactions involved in the synthesis and utilization of nicotinamide adenine dinucleotide (NAD). There are several routes leading to NAD biosynthesis from various sources. NAD, in addition to its well known role as a cofactor in redox reactions, also serves as a substrate for several classes of enzymes.
Synonyms: exact_synonym: NAD metabolic pathway
related_synonym: SMP:00124; SMP:00129
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G
Gapdh
glyceraldehyde-3-phosphate dehydrogenase
ISO
SMPDB
SMP:00124
NCBI chr 4:159,648,592...159,653,436
Ensembl chr 4:157,962,343...157,966,235
G
Got1
glutamic-oxaloacetic transaminase 1
ISO
RGD
PMID:18020963 PMID:16368075
RGD:5129954 , RGD:11251688
NCBI chr 1:252,306,541...252,337,622
Ensembl chr 1:242,357,306...242,380,633
G
Got2
glutamic-oxaloacetic transaminase 2
ISO
SMPDB RGD
PMID:18020963 PMID:16368075
SMP:00129, RGD:5129954 , RGD:11251688
NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994
G
Gpd1
glycerol-3-phosphate dehydrogenase 1
ISO
SMPDB RGD
PMID:18020963 PMID:16368075
SMP:00124, RGD:5129954 , RGD:11251688
NCBI chr 7:132,722,982...132,730,373
Ensembl chr 7:130,844,138...130,851,529
G
Gpd2
glycerol-3-phosphate dehydrogenase 2
ISO
SMPDB RGD
PMID:18020963 PMID:16368075
SMP:00124, RGD:5129954 , RGD:11251688
NCBI chr 3:62,209,432...62,346,590
Ensembl chr 3:41,801,930...41,936,901
G
Mdh1
malate dehydrogenase 1
ISO
RGD
PMID:18020963 PMID:16368075
RGD:5129954 , RGD:11251688
NCBI chr14:99,831,934...99,847,227
Ensembl chr14:95,630,306...95,645,925
G
Mdh2
malate dehydrogenase 2
ISO
SMPDB RGD
PMID:18020963 PMID:16368075
SMP:00129, RGD:5129954 , RGD:11251688
NCBI chr12:26,530,886...26,543,841
Ensembl chr12:20,894,262...20,907,271
G
Nadk
NAD kinase
ISO
RGD
PMID:25641397
RGD:11250407
NCBI chr 5:171,427,973...171,458,586
Ensembl chr 5:166,145,481...166,176,322
G
Nadk2
NAD kinase 2, mitochondrial
ISO
RGD
PMID:25641397
RGD:11250407
NCBI chr 2:59,844,854...59,886,989
Ensembl chr 2:58,117,674...58,159,808
G
Nnt
nicotinamide nucleotide transhydrogenase
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr 2:51,411,413...51,505,125
Ensembl chr 2:51,411,413...51,504,823
G
Slc1a3
solute carrier family 1 member 3
ISO
RGD
PMID:18020963 PMID:16368075
RGD:5129954 , RGD:11251688
NCBI chr 2:59,482,707...59,557,808
Ensembl chr 2:57,755,497...57,830,605
G
Slc22a13
solute carrier family 22 member 13
ISO
RGD
PMID:25837229
RGD:11251687
NCBI chr 8:127,800,097...127,811,750
Ensembl chr 8:118,922,367...118,953,635
G
Slc25a11
solute carrier family 25 member 11
ISO
SMPDB
SMP:00129
NCBI chr10:55,856,209...55,859,060
Ensembl chr10:55,357,597...55,360,410
G
Slc25a12
solute carrier family 25 member 12
ISO
SMPDB RGD
PMID:18020963 PMID:16368075
SMP:00129, RGD:5129954 , RGD:11251688
NCBI chr 3:76,504,868...76,599,536
Ensembl chr 3:56,097,269...56,192,100
G
Slc25a13
solute carrier family 25 member 13
ISO
RGD
PMID:16368075
RGD:11251688
NCBI chr 4:35,145,721...35,328,403
Ensembl chr 4:34,179,224...34,361,902
G
Slc36a4
solute carrier family 36 member 4
ISO
RGD
PMID:25837229
RGD:11251687
NCBI chr 8:20,801,256...20,834,046
Ensembl chr 8:12,519,943...12,552,031
G
Slc5a8
solute carrier family 5 member 8
ISO
RGD
PMID:25837229
RGD:11251687
NCBI chr 7:25,160,280...25,201,185
Ensembl chr 7:23,272,427...23,314,642
G
Slc7a5
solute carrier family 7 member 5
ISO
RGD
PMID:25837229
RGD:11251687
NCBI chr19:66,843,808...66,872,412
Ensembl chr19:49,935,220...49,963,823
G
Bst1
bone marrow stromal cell antigen 1
ISO
RGD
PMID:23576305
RGD:11250406
NCBI chr14:71,466,179...71,482,671
Ensembl chr14:67,252,998...67,270,180
G
Cd38
CD38 molecule
ISO
RGD
PMID:23576305
RGD:11250406
NCBI chr14:71,384,532...71,424,794
Ensembl chr14:67,172,063...67,211,986
G
Aplf
aprataxin and PNKP like factor
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 4:121,627,800...121,679,980
Ensembl chr 4:120,070,471...120,122,633
G
Chfr
checkpoint with forkhead and ring finger domains
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr12:52,164,214...52,197,860
Ensembl chr12:46,504,497...46,538,014
G
Macrod1
mono-ADP ribosylhydrolase 1
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 1:213,675,413...213,831,571
Ensembl chr 1:204,246,166...204,389,716
G
Macrod2
mono-ADP ribosylhydrolase 2
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 3:148,173,821...150,191,077
Ensembl chr 3:127,720,181...129,734,492
G
Oard1
O-acyl-ADP-ribose deacylase 1
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 9:20,074,507...20,084,946
Ensembl chr 9:12,578,970...12,587,249
G
Parg
poly (ADP-ribose) glycohydrolase
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr16:7,442,696...7,550,585
Ensembl chr16:7,436,476...7,544,273
G
Parp1
poly (ADP-ribose) polymerase 1
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr13:94,839,484...94,871,295
Ensembl chr13:92,307,586...92,339,404
G
Parp10
poly (ADP-ribose) polymerase family, member 10
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 7:109,829,721...109,839,054
Ensembl chr 7:107,949,043...107,958,304
G
Parp11
poly (ADP-ribose) polymerase family, member 11
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 4:160,298,040...160,344,369
Ensembl chr 4:160,304,905...160,341,946
G
Parp12
poly (ADP-ribose) polymerase family, member 12
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 4:68,793,411...68,851,214
Ensembl chr 4:67,839,237...67,883,685
G
Parp14
poly (ADP-ribose) polymerase family, member 14
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr11:78,408,134...78,440,201
Ensembl chr11:64,902,785...64,934,916
G
Parp16
poly (ADP-ribose) polymerase family, member 16
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 8:74,626,399...74,644,610
Ensembl chr 8:65,727,706...65,749,433
G
Parp2
poly (ADP-ribose) polymerase 2
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr15:26,494,722...26,517,893
Ensembl chr15:24,034,106...24,044,338
G
Parp3
poly (ADP-ribose) polymerase family, member 3
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 8:107,111,010...107,117,073
Ensembl chr 8:107,111,012...107,116,782
G
Parp4
poly (ADP-ribose) polymerase family, member 4
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr15:30,690,503...30,792,868
Ensembl chr15:30,686,613...30,828,810
G
Parp6
poly (ADP-ribose) polymerase family, member 6
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 8:68,912,393...68,944,904
Ensembl chr 8:60,016,877...60,049,108
G
Parp8
poly (ADP-ribose) polymerase family, member 8
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 2:48,679,405...48,848,700
Ensembl chr 2:48,679,436...48,849,253
G
Parp9
poly (ADP-ribose) polymerase family, member 9
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr11:78,286,282...78,320,409
Ensembl chr11:64,780,981...64,815,455
G
Rnf146
ring finger protein 146
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 1:30,286,680...30,304,367
Ensembl chr 1:28,458,887...28,475,923
G
Tiparp
TCDD-inducible poly(ADP-ribose) polymerase
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 2:152,063,769...152,090,414
Ensembl chr 2:149,753,682...149,780,327
G
Tnks
tankyrase
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr16:63,922,969...64,073,972
Ensembl chr16:57,225,094...57,366,260
G
Tnks2
tankyrase 2
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 1:243,980,432...244,033,629
Ensembl chr 1:234,567,858...234,621,079
G
Zc3hav1
zinc finger CCCH-type containing, antiviral 1
ISO
RGD
PMID:26091342
RGD:11100038
NCBI chr 4:67,979,055...68,029,353
Ensembl chr 4:67,012,185...67,062,428
G
Nadsyn1
NAD synthetase 1
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr 1:208,410,914...208,439,242
Ensembl chr 1:198,981,604...199,009,869
G
Nmnat1
nicotinamide nucleotide adenylyltransferase 1
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr 5:165,193,301...165,211,213
Ensembl chr 5:159,910,242...159,928,180
G
Nmnat2
nicotinamide nucleotide adenylyltransferase 2
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr13:67,655,794...67,831,609
Ensembl chr13:65,105,950...65,278,484
G
Nmnat3
nicotinamide nucleotide adenylyltransferase 3
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr 8:107,771,124...107,888,528
Ensembl chr 8:98,873,398...99,020,645
G
Qprt
quinolinate phosphoribosyltransferase
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr 1:181,718,189...181,733,486
Ensembl chr 1:181,718,190...181,733,486
G
Nadsyn1
NAD synthetase 1
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr 1:208,410,914...208,439,242
Ensembl chr 1:198,981,604...199,009,869
G
Nampt
nicotinamide phosphoribosyltransferase
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr 6:55,152,756...55,189,547
Ensembl chr 6:49,424,332...49,462,100
G
Naprt
nicotinate phosphoribosyltransferase
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr 7:107,576,645...107,580,102
Ensembl chr 7:107,576,627...107,580,102
G
Nmnat1
nicotinamide nucleotide adenylyltransferase 1
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr 5:165,193,301...165,211,213
Ensembl chr 5:159,910,242...159,928,180
G
Nmnat2
nicotinamide nucleotide adenylyltransferase 2
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr13:67,655,794...67,831,609
Ensembl chr13:65,105,950...65,278,484
G
Nmnat3
nicotinamide nucleotide adenylyltransferase 3
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr 8:107,771,124...107,888,528
Ensembl chr 8:98,873,398...99,020,645
G
Nmrk1
nicotinamide riboside kinase 1
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr 1:216,049,350...216,076,792
Ensembl chr 1:216,049,437...216,076,791
G
Nmrk2
nicotinamide riboside kinase 2
ISO
RGD
PMID:20007326
RGD:11099972
NCBI chr 7:8,514,855...8,517,916
Ensembl chr 7:8,514,927...8,517,922
G
Sirt1
sirtuin 1
ISO
RGD
PMID:26785480
RGD:11100032
NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260
G
Sirt2
sirtuin 2
ISO
RGD
PMID:26785480
RGD:11100032
NCBI chr 1:93,181,472...93,204,499
Ensembl chr 1:84,052,903...84,076,975
G
Sirt3
sirtuin 3
ISO
RGD
PMID:26785480
RGD:11100032
NCBI chr 1:205,371,703...205,394,145
Ensembl chr 1:195,942,073...195,964,808
G
Sirt4
sirtuin 4
ISO
RGD
PMID:26785480
RGD:11100032
NCBI chr12:46,785,852...46,800,179
Ensembl chr12:41,131,262...41,139,439
G
Sirt5
sirtuin 5
ISO
RGD
PMID:26785480
RGD:11100032
NCBI chr17:21,310,028...21,337,137
Ensembl chr17:21,310,028...21,337,101
G
Sirt6
sirtuin 6
ISO
RGD
PMID:26785480
RGD:11100032
NCBI chr 7:8,733,056...8,738,543
Ensembl chr 7:8,082,364...8,098,914
G
Sirt7
sirtuin 7
ISO
RGD
PMID:26785480
RGD:11100032
NCBI chr10:106,394,802...106,401,627
Ensembl chr10:105,896,476...105,903,172
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