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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:GABA aminotransferase deficiency pathway
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Accession:PW:0002095 term browser browse the term
Definition:A condition caused by alterations in gamma aminobutyric acid metabolism due to defects in the 4-aminobutyrate aminotransferase enzyme.
Synonyms:exact_synonym: gamma aminobutyric acid transaminase deficiency pathway
 related_synonym: GABA transaminase deficiency pathway;   SMP:00351


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GABA aminotransferase deficiency pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO SMPDB SMP:00351 NCBI chr 3:33,913,068...33,960,804
Ensembl chr 3:33,908,965...34,015,469
JBrowse link
G ALDH2 aldehyde dehydrogenase 2 family member ISO SMPDB SMP:00351 NCBI chr14:39,902,317...39,933,113
Ensembl chr14:39,896,565...39,933,124
JBrowse link
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 ISO SMPDB SMP:00351 NCBI chr 7:97,360,583...97,381,885
Ensembl chr 7:97,357,952...97,381,841
JBrowse link
G CNDP1 carnosine dipeptidase 1 ISO SMPDB SMP:00351 NCBI chr 1:149,523,983...149,564,728
Ensembl chr 1:149,521,510...149,562,528
JBrowse link
G DPYD dihydropyrimidine dehydrogenase ISO SMPDB SMP:00351 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,458...120,712,462
JBrowse link
G DPYS dihydropyrimidinase ISO SMPDB SMP:00351 NCBI chr 4:32,791,152...32,879,489
Ensembl chr 4:32,789,460...32,879,489
JBrowse link
G GAD1 glutamate decarboxylase 1 ISO SMPDB SMP:00351 NCBI chr15:76,991,863...77,034,819
Ensembl chr15:76,991,928...77,034,817
JBrowse link
G LOC110256000 membrane primary amine oxidase-like ISO SMPDB SMP:00351 NCBI chr12:19,996,324...20,007,006 JBrowse link
G UPB1 beta-ureidopropionase 1 ISO SMPDB SMP:00351 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,226...49,565,100
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 4028
    disease pathway 711
      congenital disease pathway 519
        inborn genetic disease pathway 519
          inborn error of metabolism pathway 519
            inborn error of amino acid metabolism pathway 227
              GABA aminotransferase deficiency pathway 9
paths to the root