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The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (

Term:GABA aminotransferase deficiency pathway
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Accession:PW:0002095 term browser browse the term
Definition:A condition caused by alterations in gamma aminobutyric acid metabolism due to defects in the 4-aminobutyrate aminotransferase enzyme.
Synonyms:exact_synonym: gamma aminobutyric acid transaminase deficiency pathway
 related_synonym: GABA transaminase deficiency pathway;   SMP:00351

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GABA aminotransferase deficiency pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO SMPDB SMP:00351 NCBI chr16:8,513,429...8,621,568
Ensembl chr16:8,513,429...8,621,568
JBrowse link
G Aldh2 aldehyde dehydrogenase 2, mitochondrial ISO SMPDB SMP:00351 NCBI chr 5:121,566,027...121,593,824
Ensembl chr 5:121,566,027...121,593,824
JBrowse link
G Aldh6a1 aldehyde dehydrogenase family 6, subfamily A1 ISO SMPDB SMP:00351 NCBI chr12:84,430,717...84,451,024
Ensembl chr12:84,430,717...84,451,004
JBrowse link
G Aoc3 amine oxidase, copper containing 3 ISO SMPDB SMP:00351 NCBI chr11:101,330,606...101,339,430
Ensembl chr11:101,330,605...101,341,938
JBrowse link
G Cndp1 carnosine dipeptidase 1 (metallopeptidase M20 family) ISO SMPDB SMP:00351 NCBI chr18:84,610,384...84,650,234
Ensembl chr18:84,610,509...84,650,095
JBrowse link
G Dpyd dihydropyrimidine dehydrogenase ISO SMPDB SMP:00351 NCBI chr 3:118,562,109...119,432,924
Ensembl chr 3:118,562,129...119,432,924
JBrowse link
G Dpys dihydropyrimidinase ISO SMPDB SMP:00351 NCBI chr15:39,768,485...39,857,470
Ensembl chr15:39,768,487...39,857,470
JBrowse link
G Gad1 glutamate decarboxylase 1 ISO SMPDB SMP:00351 NCBI chr 2:70,561,303...70,602,014
Ensembl chr 2:70,553,072...70,602,014
JBrowse link
G Upb1 ureidopropionase, beta ISO SMPDB SMP:00351 NCBI chr10:75,406,911...75,441,679
Ensembl chr10:75,401,115...75,441,679
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6067
    disease pathway 2094
      congenital disease pathway 529
        inborn genetic disease pathway 529
          inborn error of metabolism pathway 529
            inborn error of amino acid metabolism pathway 229
              GABA aminotransferase deficiency pathway 9
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