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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:S-adenosylmethionine homeostasis pathway
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Accession:PW:0001693 term browser browse the term
Definition:Those pathways that involve the balanced generation and utilization of S-adenosylmethionine (AdoMet or SAM). SAM is a universal methyl donor and at the cross roads of metabolism, gene expression regulation and cellular signaling.
Synonyms:related_synonym: AdoMet homeostasis pathway;   SAM homeostasis pathway


show annotations for term's descendants           Sort by:
altered DNA modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MBD4 methyl-CpG binding domain 4, DNA glycosylase IMP in silico assessment of loss of DNA-protein interactions and observed enhancement of DNA repair capacity (DRC) in the context of nucleotide excision repair (NER) pathway for SNP RGD PMID:24004570 RGD:9588971 NCBI chr 3:129,430,947...129,439,948
Ensembl chr 3:129,430,947...129,440,179 		JBrowse link
altered folate cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 TAS RGD PMID:22353665 RGD:7242562 NCBI chr 3:126,103,570...126,197,945
Ensembl chr 3:126,103,562...126,197,994 		JBrowse link
G DHFR dihydrofolate reductase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983 		JBrowse link
G FOLR1 folate receptor alpha TAS RGD PMID:22108709 RGD:7242557 NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 TAS RGD PMID:22108709 RGD:7242557 NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025 		JBrowse link
G SLC46A1 solute carrier family 46 member 1 TAS RGD PMID:22108709 RGD:7242557 NCBI chr17:28,394,642...28,406,592
Ensembl chr17:28,394,642...28,407,197 		JBrowse link
altered folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 TAS RGD PMID:22353665 RGD:7242562 NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase TAS RGD PMID:22353665 RGD:7242562 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase TAS RGD PMID:22353665 RGD:7242562 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278 		JBrowse link
DNA modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXXC1 CXXC finger protein 1 TAS RGD PMID:23697932 RGD:9479164 NCBI chr18:50,282,347...50,287,692
Ensembl chr18:50,282,343...50,287,839 		JBrowse link
G DNMT1 DNA methyltransferase 1 TAS RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr19:10,133,346...10,194,953
Ensembl chr19:10,133,342...10,231,286 		JBrowse link
G DNMT3A DNA methyltransferase 3 alpha TAS RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 2:25,227,874...25,342,590
Ensembl chr 2:25,227,855...25,342,590 		JBrowse link
G DNMT3B DNA methyltransferase 3 beta TAS RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr20:32,762,385...32,809,356
Ensembl chr20:32,762,385...32,809,359 		JBrowse link
G EBF1 EBF transcription factor 1 TAS RGD PMID:24825349 RGD:8695944 NCBI chr 5:158,695,920...159,099,916
Ensembl chr 5:158,695,920...159,099,916 		JBrowse link
G KDM2A lysine demethylase 2A TAS RGD PMID:23697932 RGD:9479164 NCBI chr11:67,119,263...67,258,082
Ensembl chr11:67,119,263...67,258,082 		JBrowse link
G KDM2B lysine demethylase 2B TAS RGD PMID:23697932 RGD:9479164 NCBI chr12:121,408,461...121,582,279
Ensembl chr12:121,429,096...121,581,023 		JBrowse link
G KMT2A lysine methyltransferase 2A TAS RGD PMID:23697932 RGD:9479164 NCBI chr11:118,436,492...118,526,832
Ensembl chr11:118,436,456...118,526,832 		JBrowse link
G KMT2C lysine methyltransferase 2C TAS RGD PMID:23697932 RGD:9479164 NCBI chr 7:152,134,925...152,436,003
Ensembl chr 7:152,134,922...152,436,644 		JBrowse link
G MBD1 methyl-CpG binding domain protein 1 TAS RGD PMID:23324617 RGD:8695954 NCBI chr18:50,266,885...50,281,767
Ensembl chr18:50,266,882...50,281,774 		JBrowse link
G MBD2 methyl-CpG binding domain protein 2 TAS RGD PMID:23324617 RGD:8695954 NCBI chr18:54,151,606...54,224,669
Ensembl chr18:54,151,606...54,224,669 		JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase TAS RGD PMID:23324617 RGD:8695954 NCBI chr 3:129,430,947...129,439,948
Ensembl chr 3:129,430,947...129,440,179 		JBrowse link
G MECP2 methyl-CpG binding protein 2 TAS RGD PMID:23324617 RGD:8695954 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103 		JBrowse link
G NANOG Nanog homeobox TAS RGD PMID:24825349 RGD:8695944 NCBI chr12:7,789,402...7,799,146
Ensembl chr12:7,787,794...7,799,146 		JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase TAS RGD PMID:24825349 RGD:8695944 NCBI chr  X:71,533,104...71,575,892
Ensembl chr  X:71,533,087...71,575,892 		JBrowse link
G PPARG peroxisome proliferator activated receptor gamma TAS RGD PMID:24825349 RGD:8695944 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356 		JBrowse link
G PRDM14 PR/SET domain 14 TAS RGD PMID:24825349 RGD:8695944 NCBI chr 8:70,051,651...70,071,252
Ensembl chr 8:70,051,651...70,071,693 		JBrowse link
G SIN3A SIN3 transcription regulator family member A TAS RGD PMID:24825349 RGD:8695944 NCBI chr15:75,369,379...75,455,815
Ensembl chr15:75,369,379...75,455,842 		JBrowse link
G SPI1 Spi-1 proto-oncogene TAS RGD PMID:24825349 RGD:8695944 NCBI chr11:47,354,860...47,378,547
Ensembl chr11:47,354,860...47,409,369 		JBrowse link
G TET1 tet methylcytosine dioxygenase 1 TAS RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr10:68,560,337...68,694,487
Ensembl chr10:68,560,337...68,694,487 		JBrowse link
G TET2 tet methylcytosine dioxygenase 2 TAS RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 4:105,145,875...105,279,803
Ensembl chr 4:105,145,875...105,279,816 		JBrowse link
G TET3 tet methylcytosine dioxygenase 3 TAS RGD PMID:22770212 PMID:23697932 PMID:24825349 RGD:8695943, RGD:9479164, RGD:8695944 NCBI chr 2:73,983,631...74,135,498
Ensembl chr 2:73,984,910...74,108,176 		JBrowse link
G UHRF1 ubiquitin like with PHD and ring finger domains 1 TAS RGD PMID:23324617 RGD:8695954 NCBI chr19:4,903,080...4,962,154
Ensembl chr19:4,903,080...4,962,154 		JBrowse link
G UHRF2 ubiquitin like with PHD and ring finger domains 2 TAS RGD PMID:23324617 RGD:8695954 NCBI chr 9:6,413,199...6,507,054
Ensembl chr 9:6,413,151...6,507,054 		JBrowse link
G ZBTB33 zinc finger and BTB domain containing 33 TAS RGD PMID:23324617 RGD:8695954 NCBI chr  X:120,250,812...120,258,398
Ensembl chr  X:120,250,752...120,258,398 		JBrowse link
G ZBTB38 zinc finger and BTB domain containing 38 TAS RGD PMID:23324617 RGD:8695954 NCBI chr 3:141,324,186...141,449,792
Ensembl chr 3:141,324,213...141,449,792 		JBrowse link
G ZBTB4 zinc finger and BTB domain containing 4 TAS RGD PMID:23324617 RGD:8695954 NCBI chr17:7,459,378...7,484,249
Ensembl chr17:7,459,366...7,484,263 		JBrowse link
G ZFP57 ZFP57 zinc finger protein TAS RGD PMID:23324617 RGD:8695954 NCBI chr 6:29,672,392...29,681,152
Ensembl chr 6:29,672,483...29,681,155 		JBrowse link
folate cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 TAS RGD PMID:22353665 RGD:7242562 NCBI chr 3:126,103,570...126,197,945
Ensembl chr 3:126,103,562...126,197,994 		JBrowse link
G AMT aminomethyltransferase TAS RGD PMID:20645850 RGD:7242560 NCBI chr 3:49,416,778...49,422,473
Ensembl chr 3:49,416,778...49,422,685 		JBrowse link
G DHFR dihydrofolate reductase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983 		JBrowse link
G DLD dihydrolipoamide dehydrogenase TAS RGD PMID:20645850 RGD:7242560 NCBI chr 7:107,891,107...107,921,198
Ensembl chr 7:107,891,162...107,931,730 		JBrowse link
G DMGDH dimethylglycine dehydrogenase TAS RGD PMID:20645850 RGD:7242560 NCBI chr 5:78,997,564...79,069,674
Ensembl chr 5:78,997,564...79,236,038 		JBrowse link
G FOLH1 folate hydrolase 1 TAS RGD PMID:20814827 PMID:16859665 RGD:7242426, RGD:7242559 NCBI chr11:49,145,092...49,208,602
Ensembl chr11:49,145,092...49,208,638 		JBrowse link
G FOLR1 folate receptor alpha TAS RGD PMID:22108709 RGD:7242557 NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323 		JBrowse link
G FOLR2 folate receptor beta TAS RGD PMID:22108709 RGD:7242557 NCBI chr11:72,216,794...72,221,950
Ensembl chr11:72,216,601...72,221,950 		JBrowse link
G FPGS folylpolyglutamate synthase TAS RGD PMID:16859665 RGD:7242559 NCBI chr 9:127,802,858...127,814,506
Ensembl chr 9:127,794,597...127,814,327 		JBrowse link
G GCSH glycine cleavage system protein H TAS RGD PMID:20645850 RGD:7242560 NCBI chr16:81,081,945...81,096,395
Ensembl chr16:81,081,945...81,096,395 		JBrowse link
G GGH gamma-glutamyl hydrolase TAS RGD PMID:16859665 RGD:7242559 NCBI chr 8:63,015,079...63,038,806
Ensembl chr 8:63,014,881...63,039,407 		JBrowse link
G GLDC glycine decarboxylase TAS RGD PMID:20645850 RGD:7242560 NCBI chr 9:6,532,467...6,645,729
Ensembl chr 9:6,532,467...6,645,729 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 TAS RGD PMID:22108709 RGD:7242557 NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like TAS RGD PMID:22108709 RGD:7242557 NCBI chr 6:150,865,702...151,101,887
Ensembl chr 6:150,865,679...151,101,887 		JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase TAS RGD PMID:20645850 PMID:22108709 RGD:7242560, RGD:7242557 NCBI chr 2:74,198,615...74,217,565
Ensembl chr 2:74,186,172...74,217,565 		JBrowse link
G MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like TAS RGD PMID:22108709 RGD:7242557 NCBI chr 4:74,114,560...74,303,099
Ensembl chr 4:74,114,174...74,303,099 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025 		JBrowse link
G SARDH sarcosine dehydrogenase TAS RGD PMID:20645850 RGD:7242560 NCBI chr 9:133,659,418...133,739,955
Ensembl chr 9:133,663,560...133,739,955 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 TAS RGD PMID:22108709 RGD:7242557 NCBI chr17:18,327,873...18,363,550
Ensembl chr17:18,327,873...18,363,550 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 TAS RGD PMID:20645850 PMID:22108709 RGD:7242560, RGD:7242557 NCBI chr12:57,229,711...57,234,935
Ensembl chr12:57,229,573...57,234,935 		JBrowse link
G SLC19A1 solute carrier family 19 member 1 TAS RGD PMID:22108709 PMID:20814827 RGD:7242557, RGD:7242426 NCBI chr21:45,502,517...45,563,025
Ensembl chr21:45,493,572...45,573,365 		JBrowse link
G SLC25A32 solute carrier family 25 member 32 TAS RGD PMID:22332074 RGD:7242561 NCBI chr 8:103,398,638...103,415,107
Ensembl chr 8:103,398,635...103,415,189 		JBrowse link
G SLC46A1 solute carrier family 46 member 1 TAS RGD PMID:22108709 PMID:20814827 RGD:7242557, RGD:7242426 NCBI chr17:28,394,642...28,406,592
Ensembl chr17:28,394,642...28,407,197 		JBrowse link
folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 IEA KEGG hsa:00670 NCBI chr 3:126,103,570...126,197,945
Ensembl chr 3:126,103,562...126,197,994 		JBrowse link
G ALDH1L2 aldehyde dehydrogenase 1 family member L2 IEA KEGG hsa:00670 NCBI chr12:105,019,790...105,084,458
Ensembl chr12:105,019,784...105,107,643 		JBrowse link
G AMT aminomethyltransferase IEA KEGG hsa:00670 NCBI chr 3:49,416,778...49,422,473
Ensembl chr 3:49,416,778...49,422,685 		JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IEA
ISO
TAS		 KEGG
RGD		 PMID:9332377 PMID:22332074 hsa:00670, RGD:70804, RGD:7242561 NCBI chr 2:215,312,059...215,368,592
Ensembl chr 2:215,311,956...215,349,773 		JBrowse link
G DHFR dihydrofolate reductase ISS
TAS
IEA		 KEGG
RGD		 PMID:11502523 PMID:22332074 hsa:00670, RGD:1298877, RGD:7242561 NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983 		JBrowse link
G DMGDH dimethylglycine dehydrogenase ISS RGD PMID:15358367 RGD:1547831 NCBI chr 5:78,997,564...79,069,674
Ensembl chr 5:78,997,564...79,236,038 		JBrowse link
G FOLH1 folate hydrolase 1 ISS RGD PMID:9501243 RGD:728645 NCBI chr11:49,145,092...49,208,602
Ensembl chr11:49,145,092...49,208,638 		JBrowse link
G FTCD formimidoyltransferase cyclodeaminase IEA KEGG hsa:00670 NCBI chr21:46,136,262...46,155,579
Ensembl chr21:46,136,160...46,155,579 		JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IDA
TAS
IEA		 KEGG
RGD		 PMID:12450384 PMID:22332074 hsa:00670, RGD:1547842, RGD:7242561 NCBI chr21:33,503,931...33,542,893
Ensembl chr21:33,503,931...33,543,491 		JBrowse link
G GNMT glycine N-methyltransferase ISO RGD PMID:8278367 RGD:1545057 NCBI chr 6:42,960,754...42,963,880
Ensembl chr 6:42,960,754...42,963,880 		JBrowse link
G MTFMT mitochondrial methionyl-tRNA formyltransferase IEA KEGG hsa:00670 NCBI chr15:65,001,512...65,029,639
Ensembl chr15:65,001,512...65,029,639 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 IEA
TAS
ISS		 KEGG
RGD		 PMID:22332074 PMID:2186031 hsa:00670, RGD:7242561, RGD:1299513 NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like IEA KEGG hsa:00670 NCBI chr 6:150,865,702...151,101,887
Ensembl chr 6:150,865,679...151,101,887 		JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase TAS
IEA		 KEGG
RGD		 PMID:9454603 hsa:00670, RGD:1540378 NCBI chr 2:74,198,615...74,217,565
Ensembl chr 2:74,186,172...74,217,565 		JBrowse link
G MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like IEA KEGG hsa:00670 NCBI chr 4:74,114,560...74,303,099
Ensembl chr 4:74,114,174...74,303,099 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase TAS
IEA		 KEGG
RGD		 PMID:11933257 PMID:22332074 hsa:00670, RGD:1535021, RGD:7242561 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455 		JBrowse link
G MTHFS methenyltetrahydrofolate synthetase IEA KEGG hsa:00670 NCBI chr15:79,843,547...79,897,285
Ensembl chr15:79,833,585...79,897,379 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase IEA
TAS
ISS		 KEGG
RGD		 PMID:20814827 PMID:15845641 hsa:00670, RGD:7242426, RGD:1359026 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase TAS RGD PMID:20814827 RGD:7242426 NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 TAS
IEA
ISO		 KEGG
RGD		 PMID:15671219 PMID:22332074 PMID:3110140 hsa:00670, RGD:1359815, RGD:7242561, RGD:2300383 NCBI chr17:18,327,873...18,363,550
Ensembl chr17:18,327,873...18,363,550 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 TAS
IEA
ISO		 KEGG
RGD		 PMID:15671219 PMID:22332074 PMID:3110140 hsa:00670, RGD:1359815, RGD:7242561, RGD:2300383 NCBI chr12:57,229,711...57,234,935
Ensembl chr12:57,229,573...57,234,935 		JBrowse link
G TYMS thymidylate synthetase IEA
TAS
ISS		 KEGG
RGD		 PMID:22332074 PMID:9894005 hsa:00670, RGD:7242561, RGD:1545055 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578 		JBrowse link
folate metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 EXP SMPDB SMP:00053 NCBI chr 3:126,103,570...126,197,945
Ensembl chr 3:126,103,562...126,197,994 		JBrowse link
G ALPG alkaline phosphatase, germ cell IEA KEGG hsa:00790 NCBI chr 2:232,406,844...232,410,714
Ensembl chr 2:232,406,844...232,410,714 		JBrowse link
G ALPI alkaline phosphatase, intestinal IEA KEGG hsa:00790 NCBI chr 2:232,456,153...232,460,753
Ensembl chr 2:232,456,125...232,460,753 		JBrowse link
G ALPL alkaline phosphatase, biomineralization associated IEA KEGG hsa:00790 NCBI chr 1:21,508,984...21,578,410
Ensembl chr 1:21,509,397...21,578,410 		JBrowse link
G ALPP alkaline phosphatase, placental IEA KEGG hsa:00790 NCBI chr 2:232,378,751...232,382,889
Ensembl chr 2:232,378,724...232,382,889 		JBrowse link
G DHFR dihydrofolate reductase ISS
EXP
IEA		 SMPDB
KEGG
RGD		 PMID:11502523 SMP:00053 hsa:00790, RGD:1298877 NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983 		JBrowse link
G DMGDH dimethylglycine dehydrogenase ISS RGD PMID:15358367 RGD:1547831 NCBI chr 5:78,997,564...79,069,674
Ensembl chr 5:78,997,564...79,236,038 		JBrowse link
G FOLH1 folate hydrolase 1 IDA RGD PMID:9816319 RGD:151347637 NCBI chr11:49,145,092...49,208,602
Ensembl chr11:49,145,092...49,208,638 		JBrowse link
G FOLR2 folate receptor beta TAS RGD PMID:8445646 RGD:1540379 NCBI chr11:72,216,794...72,221,950
Ensembl chr11:72,216,601...72,221,950 		JBrowse link
G FPGS folylpolyglutamate synthase IEA
EXP		 KEGG
SMPDB		 SMP:00053 hsa:00790 NCBI chr 9:127,802,858...127,814,506
Ensembl chr 9:127,794,597...127,814,327 		JBrowse link
G FTCD formimidoyltransferase cyclodeaminase EXP SMPDB SMP:00053 NCBI chr21:46,136,262...46,155,579
Ensembl chr21:46,136,160...46,155,579 		JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IDA RGD PMID:12450384 RGD:1547842 NCBI chr21:33,503,931...33,542,893
Ensembl chr21:33,503,931...33,543,491 		JBrowse link
G GCH1 GTP cyclohydrolase 1 IEA KEGG hsa:00790 NCBI chr14:54,842,017...54,902,826
Ensembl chr14:54,842,008...54,902,826 		JBrowse link
G GGH gamma-glutamyl hydrolase IEA
EXP		 KEGG
SMPDB		 SMP:00053 hsa:00790 NCBI chr 8:63,015,079...63,038,806
Ensembl chr 8:63,014,881...63,039,407 		JBrowse link
G GNMT glycine N-methyltransferase ISO RGD PMID:15347642 RGD:1359070 NCBI chr 6:42,960,754...42,963,880
Ensembl chr 6:42,960,754...42,963,880 		JBrowse link
G MOCS1 molybdenum cofactor synthesis 1 IEA KEGG hsa:00790 NCBI chr 6:39,904,170...39,934,462
Ensembl chr 6:39,899,578...39,934,551 		JBrowse link
G MOCS2 molybdenum cofactor synthesis 2 IEA KEGG hsa:00790 NCBI chr 5:53,095,679...53,109,757
Ensembl chr 5:53,095,679...53,110,063 		JBrowse link
G MTFMT mitochondrial methionyl-tRNA formyltransferase EXP SMPDB SMP:00053 NCBI chr15:65,001,512...65,029,639
Ensembl chr15:65,001,512...65,029,639 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISS
EXP		 SMPDB
RGD		 PMID:2186031 SMP:00053, RGD:1299513 NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like EXP SMPDB SMP:00053 NCBI chr 6:150,865,702...151,101,887
Ensembl chr 6:150,865,679...151,101,887 		JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase TAS
EXP		 SMPDB
RGD		 PMID:9454603 SMP:00053, RGD:1540378 NCBI chr 2:74,198,615...74,217,565
Ensembl chr 2:74,186,172...74,217,565 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase TAS
EXP		 SMPDB
RGD		 PMID:11933257 SMP:00053, RGD:1535021 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455 		JBrowse link
G MTHFS methenyltetrahydrofolate synthetase EXP SMPDB SMP:00053 NCBI chr15:79,843,547...79,897,285
Ensembl chr15:79,833,585...79,897,379 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISS RGD PMID:15845641 RGD:1359026 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase TAS RGD PMID:15979034 RGD:1359037 NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025 		JBrowse link
G PTS 6-pyruvoyltetrahydropterin synthase IEA KEGG hsa:00790 NCBI chr11:112,226,428...112,233,973
Ensembl chr11:112,226,367...112,269,955 		JBrowse link
G QDPR quinoid dihydropteridine reductase IEA KEGG hsa:00790 NCBI chr 4:17,486,395...17,512,090
Ensembl chr 4:17,460,261...17,512,206 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 TAS RGD PMID:15671219 RGD:1359815 NCBI chr17:18,327,873...18,363,550
Ensembl chr17:18,327,873...18,363,550 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 TAS RGD PMID:15671219 RGD:1359815 NCBI chr12:57,229,711...57,234,935
Ensembl chr12:57,229,573...57,234,935 		JBrowse link
G SLC19A1 solute carrier family 19 member 1 ISS RGD PMID:11600421 RGD:735239 NCBI chr21:45,502,517...45,563,025
Ensembl chr21:45,493,572...45,573,365 		JBrowse link
G SLC46A1 solute carrier family 46 member 1 EXP SMPDB SMP:00053 NCBI chr17:28,394,642...28,406,592
Ensembl chr17:28,394,642...28,407,197 		JBrowse link
G SPR sepiapterin reductase IEA KEGG hsa:00790 NCBI chr 2:72,887,408...72,892,158
Ensembl chr 2:72,887,382...72,892,158 		JBrowse link
G TYMS thymidylate synthetase ISS RGD PMID:9894005 RGD:1545055 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578 		JBrowse link
histone modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AEBP2 AE binding protein 2 TAS RGD PMID:24148750 RGD:9479059 NCBI chr12:19,404,072...19,522,227
Ensembl chr12:19,404,045...19,720,801 		JBrowse link
G APLF aprataxin and PNKP like factor TAS RGD PMID:23288364 RGD:9068945 NCBI chr 2:68,467,585...68,580,162
Ensembl chr 2:68,467,572...68,655,862 		JBrowse link
G ASF1A anti-silencing function 1A histone chaperone TAS RGD PMID:23288364 RGD:9068945 NCBI chr 6:118,894,152...118,909,171
Ensembl chr 6:118,894,152...118,909,171 		JBrowse link
G ASF1B anti-silencing function 1B histone chaperone TAS RGD PMID:23288364 RGD:9068945 NCBI chr19:14,119,512...14,136,589
Ensembl chr19:14,119,512...14,136,613 		JBrowse link
G ASH1L ASH1 like histone lysine methyltransferase TAS RGD PMID:23200123 RGD:7242632 NCBI chr 1:155,335,268...155,563,202
Ensembl chr 1:155,335,268...155,563,162 		JBrowse link
G ASH2L ASH2 like, histone lysine methyltransferase complex subunit TAS RGD PMID:22663077 RGD:9479053 NCBI chr 8:38,105,493...38,140,080
Ensembl chr 8:38,105,493...38,144,076 		JBrowse link
G BAP1 BRCA1 associated deubiquitinase 1 TAS RGD PMID:24647359 RGD:9479061 NCBI chr 3:52,401,008...52,410,008
Ensembl chr 3:52,401,008...52,410,008 		JBrowse link
G BIRC5 baculoviral IAP repeat containing 5 TAS RGD PMID:23642229 RGD:9479074 NCBI chr17:78,214,253...78,225,635
Ensembl chr17:78,214,186...78,225,636 		JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr10:22,321,099...22,331,706
Ensembl chr10:22,321,099...22,331,484 		JBrowse link
G BPTF bromodomain PHD finger transcription factor TAS RGD PMID:24686119 PMID:23642229 RGD:9479075, RGD:9479074 NCBI chr17:67,825,503...67,984,378
Ensembl chr17:67,825,503...67,984,378 		JBrowse link
G BRCC3 BRCA1/BRCA2-containing complex subunit 3 TAS RGD PMID:24647359 RGD:9479061 NCBI chr  X:155,071,508...155,123,077
Ensembl chr  X:155,071,420...155,123,077 		JBrowse link
G BRD1 bromodomain containing 1 TAS RGD PMID:24686119 RGD:9479075 NCBI chr22:49,773,278...49,827,873
Ensembl chr22:49,773,283...49,827,873 		JBrowse link
G BRD2 bromodomain containing 2 TAS RGD PMID:24686119 RGD:9479075 NCBI chr 6:32,968,594...32,981,505
Ensembl chr 6:32,968,594...32,981,505 		JBrowse link
G BRD3 bromodomain containing 3 TAS RGD PMID:24686119 RGD:9479075 NCBI chr 9:134,030,305...134,068,548
Ensembl chr 9:134,030,305...134,068,535 		JBrowse link
G BRD4 bromodomain containing 4 TAS RGD PMID:24686119 RGD:9479075 NCBI chr19:15,235,519...15,332,539
Ensembl chr19:15,235,519...15,332,545 		JBrowse link
G BRD7 bromodomain containing 7 TAS RGD PMID:24686119 RGD:9479075 NCBI chr16:50,315,957...50,368,988
Ensembl chr16:50,313,487...50,368,988 		JBrowse link
G BRDT bromodomain testis associated TAS RGD PMID:24686119 RGD:9479075 NCBI chr 1:91,949,371...92,014,428
Ensembl chr 1:91,949,343...92,014,426 		JBrowse link
G BRF1 BRF1 RNA polymerase III transcription initiation factor subunit TAS RGD PMID:23642229 RGD:9479074 NCBI chr14:105,209,286...105,315,589
Ensembl chr14:105,209,286...105,315,589 		JBrowse link
G CARM1 coactivator associated arginine methyltransferase 1 TAS RGD PMID:24583552 RGD:9479047 NCBI chr19:10,871,553...10,923,075
Ensembl chr19:10,871,553...10,923,075 		JBrowse link
G CBX2 chromobox 2 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr17:79,777,311...79,787,983
Ensembl chr17:79,778,148...79,787,983 		JBrowse link
G CBX4 chromobox 4 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr17:79,833,156...79,839,440
Ensembl chr17:79,833,156...79,839,440 		JBrowse link
G CBX5 chromobox 5 TAS RGD PMID:23642229 RGD:9479074 NCBI chr12:54,230,942...54,280,122
Ensembl chr12:54,230,942...54,280,133 		JBrowse link
G CBX6 chromobox 6 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr22:38,861,422...38,872,216
Ensembl chr22:38,861,422...38,872,249 		JBrowse link
G CBX7 chromobox 7 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr22:39,130,772...39,152,680
Ensembl chr22:39,120,167...39,152,680 		JBrowse link
G CBX8 chromobox 8 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr17:79,792,132...79,797,077
Ensembl chr17:79,792,132...79,801,683 		JBrowse link
G CHAF1A chromatin assembly factor 1 subunit A TAS RGD PMID:23288364 RGD:9068945 NCBI chr19:4,402,640...4,450,830
Ensembl chr19:4,402,640...4,445,018 		JBrowse link
G CHAF1B chromatin assembly factor 1 subunit B TAS RGD PMID:23288364 RGD:9068945 NCBI chr21:36,385,392...36,419,015
Ensembl chr21:36,385,392...36,419,015 		JBrowse link
G CHD1 chromodomain helicase DNA binding protein 1 TAS RGD PMID:23642229 RGD:9479074 NCBI chr 5:98,853,985...98,929,007
Ensembl chr 5:98,853,985...98,929,007 		JBrowse link
G CREBBP CREB binding protein TAS RGD PMID:21151613 PMID:24686119 RGD:9104959, RGD:9479075 NCBI chr16:3,725,054...3,880,713
Ensembl chr16:3,725,054...3,880,713 		JBrowse link
G CXXC1 CXXC finger protein 1 TAS RGD PMID:22663077 RGD:9479053 NCBI chr18:50,282,347...50,287,692
Ensembl chr18:50,282,343...50,287,839 		JBrowse link
G DAXX death domain associated protein TAS RGD PMID:23288364 RGD:9068945 NCBI chr 6:33,318,558...33,322,959
Ensembl chr 6:33,318,558...33,323,016 		JBrowse link
G DOT1L DOT1 like histone lysine methyltransferase TAS RGD PMID:23200123 RGD:7242632 NCBI chr19:2,163,933...2,232,578
Ensembl chr19:2,163,933...2,232,578 		JBrowse link
G DPF3 double PHD fingers 3 TAS RGD PMID:23642229 RGD:9479074 NCBI chr14:72,609,034...72,894,101
Ensembl chr14:72,609,034...72,894,101 		JBrowse link
G DPY30 dpy-30 histone methyltransferase complex regulatory subunit TAS RGD PMID:22663077 RGD:9479053 NCBI chr 2:32,011,649...32,039,835
Ensembl chr 2:31,867,809...32,039,805 		JBrowse link
G EHMT1 euchromatic histone lysine methyltransferase 1 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 9:137,619,005...137,836,127
Ensembl chr 9:137,618,992...137,870,016 		JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 TAS RGD PMID:23200123 PMID:23642229 RGD:7242632, RGD:9479074 NCBI chr 6:31,879,759...31,897,698
Ensembl chr 6:31,879,759...31,897,698 		JBrowse link
G EP300 E1A binding protein p300 TAS RGD PMID:21151613 RGD:9104959 NCBI chr22:41,092,592...41,180,077
Ensembl chr22:41,092,510...41,180,077 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit TAS RGD PMID:23200123 RGD:7242632 NCBI chr 7:148,807,383...148,884,291
Ensembl chr 7:148,807,257...148,884,321 		JBrowse link
G H2AX H2A.X variant histone TAS RGD PMID:24614311 RGD:9075965 NCBI chr11:119,093,874...119,095,465
Ensembl chr11:119,093,874...119,095,465 		JBrowse link
G H2AZ1 H2A.Z variant histone 1 TAS RGD PMID:24696452 RGD:9074213 NCBI chr 4:99,948,088...99,950,275
Ensembl chr 4:99,948,086...99,950,355 		JBrowse link
G H3-3A H3.3 histone A TAS RGD PMID:24614311 RGD:9075965 NCBI chr 1:226,061,831...226,072,019
Ensembl chr 1:226,061,851...226,072,019 		JBrowse link
G H3-3B H3.3 histone B TAS RGD PMID:24614311 RGD:9075965 NCBI chr17:75,776,434...75,779,779
Ensembl chr17:75,776,434...75,785,893 		JBrowse link
G HAT1 histone acetyltransferase 1 TAS RGD PMID:21151613 RGD:9104959 NCBI chr 2:171,922,461...171,983,686
Ensembl chr 2:171,922,448...171,983,686 		JBrowse link
G HCFC1 host cell factor C1 TAS RGD PMID:22663077 RGD:9479053 NCBI chr  X:153,947,557...153,971,818
Ensembl chr  X:153,947,557...153,971,818 		JBrowse link
G HDAC1 histone deacetylase 1 TAS RGD PMID:21151613 RGD:9104959 NCBI chr 1:32,292,083...32,333,626
Ensembl chr 1:32,292,083...32,333,635 		JBrowse link
G HDAC10 histone deacetylase 10 TAS RGD PMID:21151613 RGD:9104959 NCBI chr22:50,245,183...50,251,265
Ensembl chr22:50,245,183...50,251,405 		JBrowse link
G HDAC11 histone deacetylase 11 TAS RGD PMID:21151613 RGD:9104959 NCBI chr 3:13,480,306...13,506,416
Ensembl chr 3:13,479,724...13,506,424 		JBrowse link
G HDAC2 histone deacetylase 2 TAS RGD PMID:21151613 RGD:9104959 NCBI chr 6:113,933,028...113,971,148
Ensembl chr 6:113,933,028...114,011,308 		JBrowse link
G HDAC3 histone deacetylase 3 TAS RGD PMID:21151613 RGD:9104959 NCBI chr 5:141,620,881...141,636,849
Ensembl chr 5:141,620,876...141,636,849 		JBrowse link
G HDAC4 histone deacetylase 4 TAS RGD PMID:21151613 RGD:9104959 NCBI chr 2:239,048,168...239,401,649
Ensembl chr 2:239,048,168...239,401,654 		JBrowse link
G HDAC5 histone deacetylase 5 TAS RGD PMID:21151613 RGD:9104959 NCBI chr17:44,076,753...44,123,641
Ensembl chr17:44,076,746...44,123,702 		JBrowse link
G HDAC6 histone deacetylase 6 TAS RGD PMID:21151613 RGD:9104959 NCBI chr  X:48,801,398...48,824,982
Ensembl chr  X:48,801,377...48,824,982 		JBrowse link
G HDAC7 histone deacetylase 7 TAS RGD PMID:21151613 RGD:9104959 NCBI chr12:47,782,722...47,821,344
Ensembl chr12:47,782,722...47,833,132 		JBrowse link
G HDAC8 histone deacetylase 8 TAS RGD PMID:21151613 RGD:9104959 NCBI chr  X:72,329,516...72,572,843
Ensembl chr  X:72,329,516...72,573,101 		JBrowse link
G HDAC9 histone deacetylase 9 TAS RGD PMID:21151613 RGD:9104959 NCBI chr 7:18,086,825...19,002,416
Ensembl chr 7:18,086,949...19,002,416 		JBrowse link
G HIRA histone cell cycle regulator TAS RGD PMID:23288364 RGD:9068945 NCBI chr22:19,330,698...19,431,733
Ensembl chr22:19,330,698...19,447,450 		JBrowse link
G HJURP Holliday junction recognition protein TAS RGD PMID:23288364 RGD:9068945 NCBI chr 2:233,836,702...233,854,535
Ensembl chr 2:233,833,416...233,854,566 		JBrowse link
G ING2 inhibitor of growth family member 2 TAS RGD PMID:23642229 RGD:9479074 NCBI chr 4:183,505,058...183,512,429
Ensembl chr 4:183,505,058...183,512,429 		JBrowse link
G JMJD1C jumonji domain containing 1C TAS RGD PMID:23200123 RGD:7242632 NCBI chr10:63,167,225...63,521,890
Ensembl chr10:63,167,221...63,521,850 		JBrowse link
G KAT2A lysine acetyltransferase 2A TAS RGD PMID:21151613 PMID:23642229 RGD:9104959, RGD:9479074 NCBI chr17:42,113,111...42,121,367
Ensembl chr17:42,113,111...42,121,367 		JBrowse link
G KAT2B lysine acetyltransferase 2B TAS RGD PMID:21151613 RGD:9104959 NCBI chr 3:20,040,446...20,154,404
Ensembl chr 3:20,040,446...20,154,404 		JBrowse link
G KAT5 lysine acetyltransferase 5 TAS RGD PMID:21151613 RGD:9104959 NCBI chr11:65,712,018...65,719,604
Ensembl chr11:65,711,996...65,719,604 		JBrowse link
G KAT6A lysine acetyltransferase 6A TAS RGD PMID:21151613 RGD:9104959 NCBI chr 8:41,929,479...42,051,987
Ensembl chr 8:41,929,479...42,051,994 		JBrowse link
G KAT6B lysine acetyltransferase 6B TAS RGD PMID:21151613 RGD:9104959 NCBI chr10:74,824,936...75,032,624
Ensembl chr10:74,824,927...75,032,624 		JBrowse link
G KAT7 lysine acetyltransferase 7 TAS RGD PMID:21151613 RGD:9104959 NCBI chr17:49,788,681...49,835,026
Ensembl chr17:49,788,624...49,835,026 		JBrowse link
G KAT8 lysine acetyltransferase 8 TAS RGD PMID:21151613 RGD:9104959 NCBI chr16:31,117,664...31,131,393
Ensembl chr16:31,114,489...31,131,393 		JBrowse link
G KDM1A lysine demethylase 1A TAS RGD PMID:23200123 RGD:7242632 NCBI chr 1:23,019,468...23,083,689
Ensembl chr 1:23,019,443...23,083,689 		JBrowse link
G KDM1B lysine demethylase 1B TAS RGD PMID:23200123 RGD:7242632 NCBI chr 6:18,155,422...18,223,854
Ensembl chr 6:18,155,329...18,223,854 		JBrowse link
G KDM2A lysine demethylase 2A TAS RGD PMID:23200123 RGD:7242632 NCBI chr11:67,119,263...67,258,082
Ensembl chr11:67,119,263...67,258,082 		JBrowse link
G KDM2B lysine demethylase 2B TAS RGD PMID:23200123 RGD:7242632 NCBI chr12:121,408,461...121,582,279
Ensembl chr12:121,429,096...121,581,023 		JBrowse link
G KDM3A lysine demethylase 3A TAS RGD PMID:23200123 RGD:7242632 NCBI chr 2:86,437,044...86,492,716
Ensembl chr 2:86,440,647...86,492,716 		JBrowse link
G KDM3B lysine demethylase 3B TAS RGD PMID:23200123 RGD:7242632 NCBI chr 5:138,352,685...138,437,027
Ensembl chr 5:138,352,685...138,437,028 		JBrowse link
G KDM4A lysine demethylase 4A TAS RGD PMID:23200123 PMID:23642229 PMID:24035451 RGD:7242632, RGD:9479074, RGD:9479148 NCBI chr 1:43,650,149...43,705,518
Ensembl chr 1:43,650,149...43,705,518 		JBrowse link
G KDM4B lysine demethylase 4B TAS RGD PMID:23200123 RGD:7242632 NCBI chr19:4,969,113...5,153,598
Ensembl chr19:4,969,113...5,153,598 		JBrowse link
G KDM4C lysine demethylase 4C TAS RGD PMID:23200123 RGD:7242632 NCBI chr 9:6,720,863...7,175,648
Ensembl chr 9:6,720,863...7,175,648 		JBrowse link
G KDM4D lysine demethylase 4D TAS RGD PMID:23200123 RGD:7242632 NCBI chr11:94,973,709...94,999,519
Ensembl chr11:94,973,709...94,999,519 		JBrowse link
G KDM5A lysine demethylase 5A TAS RGD PMID:23200123 RGD:7242632 NCBI chr12:280,057...389,320
Ensembl chr12:280,057...389,320 		JBrowse link
G KDM5B lysine demethylase 5B TAS RGD PMID:23200123 RGD:7242632 NCBI chr 1:202,724,495...202,808,421
Ensembl chr 1:202,724,495...202,808,487 		JBrowse link
G KDM5C lysine demethylase 5C TAS RGD PMID:23200123 RGD:7242632 NCBI chr  X:53,176,277...53,225,207
Ensembl chr  X:53,176,283...53,225,422 		JBrowse link
G KDM5D lysine demethylase 5D TAS RGD PMID:23200123 RGD:7242632 NCBI chr  Y:19,703,865...19,744,726
Ensembl chr  Y:19,703,865...19,744,939 		JBrowse link
G KDM6A lysine demethylase 6A TAS RGD PMID:22663077 PMID:23200123 RGD:9479053, RGD:7242632 NCBI chr  X:44,873,188...45,112,779
Ensembl chr  X:44,873,188...45,112,779 		JBrowse link
G KDM6B lysine demethylase 6B TAS RGD PMID:23200123 RGD:7242632 NCBI chr17:7,834,217...7,854,796
Ensembl chr17:7,834,217...7,854,796 		JBrowse link
G KDM7A lysine demethylase 7A TAS RGD PMID:23200123 RGD:7242632 NCBI chr 7:140,084,746...140,176,983
Ensembl chr 7:140,084,746...140,176,983 		JBrowse link
G KDM8 lysine demethylase 8 TAS RGD PMID:23200123 RGD:7242632 NCBI chr16:27,203,526...27,221,768
Ensembl chr16:27,203,508...27,221,768 		JBrowse link
G KMT2A lysine methyltransferase 2A TAS RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr11:118,436,492...118,526,832
Ensembl chr11:118,436,456...118,526,832 		JBrowse link
G KMT2B lysine methyltransferase 2B TAS RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr19:35,718,003...35,738,878
Ensembl chr19:35,717,973...35,738,880 		JBrowse link
G KMT2C lysine methyltransferase 2C TAS RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr 7:152,134,925...152,436,003
Ensembl chr 7:152,134,922...152,436,644 		JBrowse link
G KMT2D lysine methyltransferase 2D TAS RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr12:49,018,978...49,060,794
Ensembl chr12:49,018,975...49,060,794 		JBrowse link
G KMT2E lysine methyltransferase 2E (inactive) TAS RGD PMID:23200123 RGD:7242632 NCBI chr 7:105,014,205...105,115,019
Ensembl chr 7:104,940,943...105,115,019 		JBrowse link
G KMT5A lysine methyltransferase 5A TAS RGD PMID:23200123 RGD:7242632 NCBI chr12:123,384,132...123,409,353
Ensembl chr12:123,384,132...123,409,353 		JBrowse link
G KMT5B lysine methyltransferase 5B TAS RGD PMID:23200123 RGD:7242632 NCBI chr11:68,154,863...68,213,648
Ensembl chr11:68,154,863...68,213,852 		JBrowse link
G KMT5C lysine methyltransferase 5C TAS RGD PMID:23200123 RGD:7242632 NCBI chr19:55,339,876...55,348,121
Ensembl chr19:55,339,853...55,348,121 		JBrowse link
G L3MBTL1 L3MBTL histone methyl-lysine binding protein 1 TAS RGD PMID:23642229 RGD:9479074 NCBI chr20:43,507,697...43,550,954
Ensembl chr20:43,489,442...43,550,954 		JBrowse link
G LBR lamin B receptor TAS RGD PMID:24035451 RGD:9479148 NCBI chr 1:225,401,502...225,428,821
Ensembl chr 1:225,401,502...225,428,925 		JBrowse link
G MACROH2A1 macroH2A.1 histone TAS RGD PMID:24696452 RGD:9074213 NCBI chr 5:135,334,381...135,399,887
Ensembl chr 5:135,334,381...135,399,914 		JBrowse link
G MACROH2A2 macroH2A.2 histone TAS RGD PMID:24696452 RGD:9074213 NCBI chr10:70,052,846...70,112,282
Ensembl chr10:70,052,544...70,112,282 		JBrowse link
G MCPH1 microcephalin 1 TAS RGD PMID:23642229 RGD:9479074 NCBI chr 8:6,406,627...6,648,508
Ensembl chr 8:6,406,592...6,648,508 		JBrowse link
G MDC1 mediator of DNA damage checkpoint 1 TAS RGD PMID:23642229 RGD:9479074 NCBI chr 6:30,699,807...30,717,281
Ensembl chr 6:30,699,807...30,717,447 		JBrowse link
G MEN1 menin 1 TAS RGD PMID:22663077 RGD:9479053 NCBI chr11:64,803,516...64,811,294
Ensembl chr11:64,803,510...64,811,294 		JBrowse link
G MYSM1 Myb like, SWIRM and MPN domains 1 TAS RGD PMID:24647359 RGD:9479061 NCBI chr 1:58,654,743...58,700,062
Ensembl chr 1:58,643,440...58,700,090 		JBrowse link
G NAP1L1 nucleosome assembly protein 1 like 1 TAS RGD PMID:23288364 RGD:9068945 NCBI chr12:76,036,585...76,084,685
Ensembl chr12:76,036,585...76,084,735 		JBrowse link
G NASP nuclear autoantigenic sperm protein TAS RGD PMID:23288364 RGD:9068945 NCBI chr 1:45,584,041...45,618,893
Ensembl chr 1:45,583,846...45,618,904 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 TAS RGD PMID:22663077 RGD:9479053 NCBI chr20:34,714,774...34,825,651
Ensembl chr20:34,689,097...34,825,651 		JBrowse link
G NSD1 nuclear receptor binding SET domain protein 1 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 5:177,131,798...177,300,213
Ensembl chr 5:177,131,830...177,300,213 		JBrowse link
G NSD3 nuclear receptor binding SET domain protein 3 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 8:38,269,704...38,382,271
Ensembl chr 8:38,269,704...38,382,272 		JBrowse link
G ORC1 origin recognition complex subunit 1 TAS RGD PMID:23642229 RGD:9479074 NCBI chr 1:52,372,829...52,409,503
Ensembl chr 1:52,372,829...52,404,423 		JBrowse link
G PAGR1 PAXIP1 associated glutamate rich protein 1 TAS RGD PMID:22663077 RGD:9479053 NCBI chr16:29,816,152...29,822,489
Ensembl chr16:29,816,152...29,822,489 		JBrowse link
G PAXIP1 PAX interacting protein 1 TAS RGD PMID:22663077 RGD:9479053 NCBI chr 7:154,943,690...155,003,411
Ensembl chr 7:154,943,687...155,003,124 		JBrowse link
G PBRM1 polybromo 1 TAS RGD PMID:24686119 RGD:9479075 NCBI chr 3:52,545,367...52,685,913
Ensembl chr 3:52,545,352...52,685,917 		JBrowse link
G PCGF1 polycomb group ring finger 1 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 2:74,505,043...74,507,695
Ensembl chr 2:74,505,043...74,507,695 		JBrowse link
G PCGF2 polycomb group ring finger 2 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr17:38,733,898...38,749,792
Ensembl chr17:38,733,898...38,749,817 		JBrowse link
G PCGF3 polycomb group ring finger 3 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 4:705,832...770,089
Ensembl chr 4:705,748...770,089 		JBrowse link
G PCGF5 polycomb group ring finger 5 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr10:91,156,219...91,284,337
Ensembl chr10:91,163,012...91,284,337 		JBrowse link
G PCGF6 polycomb group ring finger 6 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr10:103,302,796...103,351,140
Ensembl chr10:103,302,796...103,351,144 		JBrowse link
G PHC1 polyhomeotic homolog 1 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr12:8,913,843...8,941,467
Ensembl chr12:8,913,896...8,941,467 		JBrowse link
G PHC2 polyhomeotic homolog 2 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 1:33,323,626...33,431,095
Ensembl chr 1:33,323,623...33,431,095 		JBrowse link
G PHC3 polyhomeotic homolog 3 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 3:170,087,584...170,181,733
Ensembl chr 3:170,086,732...170,181,749 		JBrowse link
G PHF1 PHD finger protein 1 TAS RGD PMID:24035451 PMID:23642229 RGD:9479148, RGD:9479074 NCBI chr 6:33,410,412...33,416,439
Ensembl chr 6:33,410,399...33,416,453 		JBrowse link
G PHF19 PHD finger protein 19 TAS RGD PMID:24035451 PMID:23642229 RGD:9479148, RGD:9479074 NCBI chr 9:120,855,651...120,904,128
Ensembl chr 9:120,855,651...120,894,896 		JBrowse link
G PHF2 PHD finger protein 2 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 9:93,576,584...93,679,587
Ensembl chr 9:93,576,584...93,679,587 		JBrowse link
G PHF8 PHD finger protein 8 TAS RGD PMID:23200123 RGD:7242632 NCBI chr  X:53,936,680...54,048,936
Ensembl chr  X:53,936,676...54,048,958 		JBrowse link
G PRDM16 PR/SET domain 16 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 1:3,069,203...3,438,621
Ensembl chr 1:3,069,168...3,438,621 		JBrowse link
G PRDM2 PR/SET domain 2 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 1:13,700,188...13,825,079
Ensembl chr 1:13,700,188...13,825,079 		JBrowse link
G PRDM6 PR/SET domain 6 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 5:123,089,241...123,194,266
Ensembl chr 5:123,089,241...123,194,266 		JBrowse link
G PRDM8 PR/SET domain 8 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 4:80,185,270...80,204,329
Ensembl chr 4:80,183,879...80,204,329 		JBrowse link
G PRDM9 PR/SET domain 9 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 5:23,507,155...23,528,093
Ensembl chr 5:23,443,586...23,528,093 		JBrowse link
G PRMT1 protein arginine methyltransferase 1 TAS RGD PMID:24583552 RGD:9479047 NCBI chr19:49,676,153...49,688,447
Ensembl chr19:49,675,786...49,689,029 		JBrowse link
G PRMT2 protein arginine methyltransferase 2 TAS RGD PMID:24583552 RGD:9479047 NCBI chr21:46,635,674...46,665,124
Ensembl chr21:46,635,595...46,665,124 		JBrowse link
G PRMT5 protein arginine methyltransferase 5 TAS RGD PMID:24583552 RGD:9479047 NCBI chr14:22,920,529...22,929,376
Ensembl chr14:22,920,525...22,929,408 		JBrowse link
G PRMT6 protein arginine methyltransferase 6 TAS RGD PMID:24583552 RGD:9479047 NCBI chr 1:107,056,674...107,059,294
Ensembl chr 1:107,056,674...107,067,636 		JBrowse link
G PRMT7 protein arginine methyltransferase 7 TAS RGD PMID:24583552 RGD:9479047 NCBI chr16:68,311,019...68,360,870
Ensembl chr16:68,310,951...68,360,852 		JBrowse link
G RAG2 recombination activating 2 TAS RGD PMID:23642229 RGD:9479074 NCBI chr11:36,590,996...36,598,236
Ensembl chr11:36,575,574...36,598,279 		JBrowse link
G RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit TAS RGD PMID:22663077 RGD:9479053 NCBI chr 1:205,086,142...205,121,978
Ensembl chr 1:205,086,142...205,122,015 		JBrowse link
G RING1 ring finger protein 1 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 6:33,208,500...33,212,716
Ensembl chr 6:33,208,500...33,212,722 		JBrowse link
G RNF2 ring finger protein 2 TAS RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 1:185,045,558...185,102,603
Ensembl chr 1:185,045,497...185,102,603 		JBrowse link
G SETD1A SET domain containing 1A, histone lysine methyltransferase TAS RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr16:30,957,754...30,984,664
Ensembl chr16:30,957,294...30,984,664 		JBrowse link
G SETD1B SET domain containing 1B, histone lysine methyltransferase TAS RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr12:121,790,155...121,832,656
Ensembl chr12:121,804,009...121,832,656 		JBrowse link
G SETD2 SET domain containing 2, histone lysine methyltransferase TAS RGD PMID:23200123 RGD:7242632 NCBI chr 3:47,016,436...47,164,840
Ensembl chr 3:47,016,428...47,164,113 		JBrowse link
G SETD7 SET domain containing 7, histone lysine methyltransferase TAS RGD PMID:23200123 RGD:7242632 NCBI chr 4:139,492,974...139,556,219
Ensembl chr 4:139,495,941...139,606,699 		JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 1:150,926,263...150,964,737
Ensembl chr 1:150,926,263...150,964,744 		JBrowse link
G SGF29 SAGA complex associated factor 29 TAS RGD PMID:24035451 PMID:23642229 RGD:9479148, RGD:9479074 NCBI chr16:28,553,920...28,591,790
Ensembl chr16:28,553,915...28,591,790 		JBrowse link
G SIRT1 sirtuin 1 TAS RGD PMID:21151613 RGD:9104959 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390 		JBrowse link
G SIRT2 sirtuin 2 TAS RGD PMID:21151613 RGD:9104959 NCBI chr19:38,878,555...38,899,618
Ensembl chr19:38,878,555...38,899,862 		JBrowse link
G SIRT3 sirtuin 3 TAS RGD PMID:21151613 RGD:9104959 NCBI chr11:215,030...236,931
Ensembl chr11:215,030...236,931 		JBrowse link
G SIRT4 sirtuin 4 TAS RGD PMID:21151613 RGD:9104959 NCBI chr12:120,291,780...120,313,249
Ensembl chr12:120,302,316...120,313,249 		JBrowse link
G SIRT5 sirtuin 5 TAS RGD PMID:21151613 RGD:9104959 NCBI chr 6:13,574,274...13,615,158
Ensembl chr 6:13,574,227...13,615,158 		JBrowse link
G SIRT6 sirtuin 6 TAS RGD PMID:21151613 RGD:9104959 NCBI chr19:4,174,109...4,182,563
Ensembl chr19:4,174,109...4,182,566 		JBrowse link
G SIRT7 sirtuin 7 TAS RGD PMID:21151613 RGD:9104959 NCBI chr17:81,911,939...81,918,176
Ensembl chr17:81,911,939...81,921,323 		JBrowse link
G SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 TAS RGD PMID:24686119 RGD:9479075 NCBI chr 9:2,015,347...2,193,620
Ensembl chr 9:1,980,290...2,193,624 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 TAS RGD PMID:24686119 RGD:9479075 NCBI chr19:10,961,030...11,062,273
Ensembl chr19:10,960,932...11,079,426 		JBrowse link
G SMYD1 SET and MYND domain containing 1 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 2:88,067,825...88,113,384
Ensembl chr 2:88,067,825...88,113,384 		JBrowse link
G SMYD2 SET and MYND domain containing 2 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 1:214,281,159...214,337,131
Ensembl chr 1:214,281,102...214,337,131 		JBrowse link
G SMYD3 SET and MYND domain containing 3 TAS RGD PMID:23200123 RGD:7242632 NCBI chr 1:245,749,347...246,507,279
Ensembl chr 1:245,749,342...246,507,312 		JBrowse link
G SPIN1 spindlin 1 TAS RGD PMID:24035451 RGD:9479148 NCBI chr 9:88,388,444...88,478,694
Ensembl chr 9:88,388,430...88,478,694 		JBrowse link
G SSRP1 structure specific recognition protein 1 TAS RGD PMID:23288364 RGD:9068945 NCBI chr11:57,325,988...57,335,892
Ensembl chr11:57,325,986...57,335,892 		JBrowse link
G SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit TAS RGD PMID:23288364 RGD:9068945 NCBI chr14:21,351,476...21,384,019
Ensembl chr14:21,351,476...21,384,019 		JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase TAS RGD PMID:23200123 RGD:7242632 NCBI chr  X:48,695,554...48,709,016
Ensembl chr  X:48,695,554...48,709,016 		JBrowse link
G SUV39H2 SUV39H2 histone lysine methyltransferase TAS RGD PMID:23200123 RGD:7242632 NCBI chr10:14,878,866...14,904,315
Ensembl chr10:14,878,820...14,904,315 		JBrowse link
G TAF1 TATA-box binding protein associated factor 1 TAS RGD PMID:23642229 PMID:24686119 RGD:9479074, RGD:9479075 NCBI chr  X:71,366,357...71,530,525
Ensembl chr  X:71,366,136...71,532,374 		JBrowse link
G TDRD3 tudor domain containing 3 TAS RGD PMID:24035451 PMID:23211769 RGD:9479148, RGD:9479163 NCBI chr13:60,395,533...60,573,879
Ensembl chr13:60,396,457...60,573,878 		JBrowse link
G TP53BP1 tumor protein p53 binding protein 1 TAS RGD PMID:24035451 PMID:23642229 RGD:9479148, RGD:9479074 NCBI chr15:43,403,061...43,510,640
Ensembl chr15:43,403,061...43,510,728 		JBrowse link
G TRIM24 tripartite motif containing 24 TAS RGD PMID:23642229 RGD:9479074 NCBI chr 7:138,460,259...138,589,996
Ensembl chr 7:138,460,259...138,589,996 		JBrowse link
G TRIM33 tripartite motif containing 33 TAS RGD PMID:23642229 PMID:24686119 RGD:9479074, RGD:9479075 NCBI chr 1:114,392,790...114,511,203
Ensembl chr 1:114,392,790...114,511,203 		JBrowse link
G UHRF1 ubiquitin like with PHD and ring finger domains 1 TAS RGD PMID:24035451 PMID:23642229 RGD:9479148, RGD:9479074 NCBI chr19:4,903,080...4,962,154
Ensembl chr19:4,903,080...4,962,154 		JBrowse link
G USP12 ubiquitin specific peptidase 12 TAS RGD PMID:24647359 RGD:9479061 NCBI chr13:27,066,156...27,171,811
Ensembl chr13:27,066,156...27,171,811 		JBrowse link
G USP16 ubiquitin specific peptidase 16 TAS RGD PMID:24647359 RGD:9479061 NCBI chr21:29,024,668...29,054,488
Ensembl chr21:29,024,629...29,054,488 		JBrowse link
G USP21 ubiquitin specific peptidase 21 TAS RGD PMID:24647359 RGD:9479061 NCBI chr 1:161,159,500...161,165,723
Ensembl chr 1:161,159,450...161,165,723 		JBrowse link
G USP22 ubiquitin specific peptidase 22 TAS RGD PMID:24647359 RGD:9479061 NCBI chr17:20,999,596...21,043,419
Ensembl chr17:20,999,596...21,043,760 		JBrowse link
G USP3 ubiquitin specific peptidase 3 TAS RGD PMID:24647359 RGD:9479061 NCBI chr15:63,504,593...63,594,633
Ensembl chr15:63,504,511...63,594,640 		JBrowse link
G USP44 ubiquitin specific peptidase 44 TAS RGD PMID:24647359 RGD:9479061 NCBI chr12:95,516,560...95,551,681
Ensembl chr12:95,516,560...95,551,476 		JBrowse link
G WDR5 WD repeat domain 5 TAS RGD PMID:22663077 PMID:23642229 RGD:9479053, RGD:9479074 NCBI chr 9:134,135,199...134,159,968
Ensembl chr 9:134,135,365...134,159,968 		JBrowse link
G WDR82 WD repeat domain 82 TAS RGD PMID:22663077 RGD:9479053 NCBI chr 3:52,254,434...52,278,649
Ensembl chr 3:52,254,434...52,288,020 		JBrowse link
G YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta TAS RGD PMID:23642229 RGD:9479074 NCBI chr 8:100,916,523...100,953,382
Ensembl chr 8:100,916,523...100,953,388 		JBrowse link
homocysteine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase ISS
TAS		 RGD PMID:11741948 PMID:20814827 RGD:730275, RGD:7242426 NCBI chr20:34,231,981...34,311,836
Ensembl chr20:34,280,268...34,311,802 		JBrowse link
G AS3MT arsenite methyltransferase ISO RGD PMID:11790780 RGD:625365 NCBI chr10:102,869,470...102,901,899
Ensembl chr10:102,869,470...102,901,899 		JBrowse link
G CARM1 coactivator associated arginine methyltransferase 1 TAS RGD PMID:15866169 RGD:1359044 NCBI chr19:10,871,553...10,923,075
Ensembl chr19:10,871,553...10,923,075 		JBrowse link
G COMT catechol-O-methyltransferase ISS RGD PMID:12584150 RGD:1359089 NCBI chr22:19,941,772...19,969,975
Ensembl chr22:19,941,371...19,969,975 		JBrowse link
G DNMT1 DNA methyltransferase 1 ISO RGD PMID:12473678 RGD:1359078 NCBI chr19:10,133,346...10,194,953
Ensembl chr19:10,133,342...10,231,286 		JBrowse link
G DOT1L DOT1 like histone lysine methyltransferase NAS RGD PMID:12628190 RGD:1359080 NCBI chr19:2,163,933...2,232,578
Ensembl chr19:2,163,933...2,232,578 		JBrowse link
G GAMT guanidinoacetate N-methyltransferase ISS RGD PMID:15533043 RGD:1359081 NCBI chr19:1,397,026...1,401,542
Ensembl chr19:1,397,026...1,401,570 		JBrowse link
G GNMT glycine N-methyltransferase ISO RGD PMID:15347642 RGD:1359070 NCBI chr 6:42,960,754...42,963,880
Ensembl chr 6:42,960,754...42,963,880 		JBrowse link
G HNMT histamine N-methyltransferase TAS RGD PMID:11566133 RGD:1359041 NCBI chr 2:137,964,473...138,016,364
Ensembl chr 2:137,964,020...138,016,364 		JBrowse link
G MRM2 mitochondrial rRNA methyltransferase 2 NAS RGD PMID:11827451 RGD:1359074 NCBI chr 7:2,234,195...2,242,205
Ensembl chr 7:2,234,195...2,242,205 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase TAS RGD PMID:20814827 RGD:7242426 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455 		JBrowse link
G NNMT nicotinamide N-methyltransferase TAS RGD PMID:15922112 RGD:1359084 NCBI chr11:114,257,806...114,313,536
Ensembl chr11:114,257,787...114,313,536 		JBrowse link
G PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ISS RGD PMID:8263531 RGD:729481 NCBI chr 6:149,749,695...149,811,421
Ensembl chr 6:149,749,444...149,811,420 		JBrowse link
G PEMT phosphatidylethanolamine N-methyltransferase ISS RGD PMID:8344945 RGD:729486 NCBI chr17:17,505,563...17,592,142
Ensembl chr17:17,505,563...17,591,708 		JBrowse link
G PNMT phenylethanolamine N-methyltransferase ISS RGD PMID:12438084 RGD:1359087 NCBI chr17:39,668,019...39,670,475
Ensembl chr17:39,667,981...39,670,475 		JBrowse link
G PRMT1 protein arginine methyltransferase 1 TAS RGD PMID:15866169 RGD:1359044 NCBI chr19:49,676,153...49,688,447
Ensembl chr19:49,675,786...49,689,029 		JBrowse link
G PRMT5 protein arginine methyltransferase 5 TAS RGD PMID:15866169 RGD:1359044 NCBI chr14:22,920,529...22,929,376
Ensembl chr14:22,920,525...22,929,408 		JBrowse link
G PRMT6 protein arginine methyltransferase 6 TAS RGD PMID:15866169 RGD:1359044 NCBI chr 1:107,056,674...107,059,294
Ensembl chr 1:107,056,674...107,067,636 		JBrowse link
G RNMT RNA guanine-7 methyltransferase TAS RGD PMID:11472630 RGD:1359071 NCBI chr18:13,726,673...13,764,556
Ensembl chr18:13,726,660...13,764,556 		JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 TAS RGD PMID:11959841 RGD:1359072 NCBI chr 1:150,926,263...150,964,737
Ensembl chr 1:150,926,263...150,964,744 		JBrowse link
G SUV39H2 SUV39H2 histone lysine methyltransferase ISS RGD PMID:11094092 RGD:1359810 NCBI chr10:14,878,866...14,904,315
Ensembl chr10:14,878,820...14,904,315 		JBrowse link
methionine cycle/metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase ISS
EXP
ISO
TAS		 SMPDB
RGD		 PMID:11741948 PMID:2292587 PMID:23073625 SMP:00033, RGD:730275, RGD:7242932, RGD:7242425 NCBI chr20:34,231,981...34,311,836
Ensembl chr20:34,280,268...34,311,802 		JBrowse link
G AMD1 adenosylmethionine decarboxylase 1 TAS
EXP
ISO		 SMPDB
RGD		 PMID:23073625 PMID:2292587 SMP:00033, RGD:7242425, RGD:7242932 NCBI chr 6:110,814,617...110,895,713
Ensembl chr 6:110,874,770...110,898,879 		JBrowse link
G AS3MT arsenite methyltransferase ISO RGD PMID:11790780 RGD:625365 NCBI chr10:102,869,470...102,901,899
Ensembl chr10:102,869,470...102,901,899 		JBrowse link
G ASMT acetylserotonin O-methyltransferase ISO RGD PMID:12198599 RGD:1359073 NCBI chr  X:1,615,059...1,643,081
NCBI chr  Y:1,615,059...1,643,081
Ensembl chr  Y:1,615,059...1,643,081
Ensembl chr  X:1,615,059...1,643,081 		JBrowse link
G BHMT betaine--homocysteine S-methyltransferase TAS
EXP		 SMPDB
RGD		 PMID:23073625 SMP:00033, RGD:7242425 NCBI chr 5:79,111,809...79,132,288
Ensembl chr 5:79,111,809...79,132,288 		JBrowse link
G CARM1 coactivator associated arginine methyltransferase 1 TAS RGD PMID:15866169 PMID:21074527 RGD:1359044, RGD:7242552 NCBI chr19:10,871,553...10,923,075
Ensembl chr19:10,871,553...10,923,075 		JBrowse link
G CBS cystathionine beta-synthase EXP SMPDB SMP:00033 NCBI chr21:43,053,191...43,076,873
Ensembl chr21:43,053,191...43,076,943 		JBrowse link
G CHDH choline dehydrogenase EXP SMPDB SMP:00033 NCBI chr 3:53,812,335...53,846,419
Ensembl chr 3:53,812,335...53,846,419 		JBrowse link
G COMT catechol-O-methyltransferase ISS RGD PMID:12584150 RGD:1359089 NCBI chr22:19,941,772...19,969,975
Ensembl chr22:19,941,371...19,969,975 		JBrowse link
G CTH cystathionine gamma-lyase EXP SMPDB SMP:00033 NCBI chr 1:70,411,268...70,439,851
Ensembl chr 1:70,411,218...70,439,851 		JBrowse link
G DNMT1 DNA methyltransferase 1 TAS
EXP		 SMPDB
RGD		 PMID:22342103 SMP:00033, RGD:7242551 NCBI chr19:10,133,346...10,194,953
Ensembl chr19:10,133,342...10,231,286 		JBrowse link
G DNMT3A DNA methyltransferase 3 alpha TAS RGD PMID:22342103 RGD:7242551 NCBI chr 2:25,227,874...25,342,590
Ensembl chr 2:25,227,855...25,342,590 		JBrowse link
G DNMT3B DNA methyltransferase 3 beta TAS RGD PMID:22342103 RGD:7242551 NCBI chr20:32,762,385...32,809,356
Ensembl chr20:32,762,385...32,809,359 		JBrowse link
G DOT1L DOT1 like histone lysine methyltransferase TAS RGD PMID:12628190 PMID:22194015 RGD:1359080, RGD:7242554 NCBI chr19:2,163,933...2,232,578
Ensembl chr19:2,163,933...2,232,578 		JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit TAS RGD PMID:22194015 RGD:7242554 NCBI chr 7:148,807,383...148,884,291
Ensembl chr 7:148,807,257...148,884,321 		JBrowse link
G GAMT guanidinoacetate N-methyltransferase ISS RGD PMID:15533043 RGD:1359081 NCBI chr19:1,397,026...1,401,542
Ensembl chr19:1,397,026...1,401,570 		JBrowse link
G GNMT glycine N-methyltransferase TAS RGD PMID:23073625 PMID:22342103 RGD:7242425, RGD:7242551 NCBI chr 6:42,960,754...42,963,880
Ensembl chr 6:42,960,754...42,963,880 		JBrowse link
G HNMT histamine N-methyltransferase TAS RGD PMID:11566133 RGD:1359041 NCBI chr 2:137,964,473...138,016,364
Ensembl chr 2:137,964,020...138,016,364 		JBrowse link
G IL4I1 interleukin 4 induced 1 EXP SMPDB SMP:00033 NCBI chr19:49,889,654...49,929,504
Ensembl chr19:49,889,654...49,929,539 		JBrowse link
G KMT5A lysine methyltransferase 5A TAS RGD PMID:22194015 RGD:7242554 NCBI chr12:123,384,132...123,409,353
Ensembl chr12:123,384,132...123,409,353 		JBrowse link
G MARS1 methionyl-tRNA synthetase 1 EXP SMPDB SMP:00033 NCBI chr12:57,488,068...57,516,652
Ensembl chr12:57,475,445...57,517,569 		JBrowse link
G MAT1A methionine adenosyltransferase 1A ISS
ISO
TAS		 RGD PMID:9202427 PMID:2292587 PMID:23073625 RGD:1359039, RGD:7242932, RGD:7242425 NCBI chr10:80,271,820...80,289,658
Ensembl chr10:80,271,820...80,289,658 		JBrowse link
G MAT2A methionine adenosyltransferase 2A ISS
EXP
TAS		 SMPDB
RGD		 PMID:11099469 PMID:23073625 SMP:00033, RGD:1359040, RGD:7242425 NCBI chr 2:85,539,168...85,545,281
Ensembl chr 2:85,539,168...85,545,281 		JBrowse link
G MAT2B methionine adenosyltransferase 2 non-catalytic beta subunit TAS
EXP		 SMPDB
RGD		 PMID:23073625 SMP:00033, RGD:7242425 NCBI chr 5:163,503,064...163,519,354
Ensembl chr 5:163,503,114...163,519,558 		JBrowse link
G MRM2 mitochondrial rRNA methyltransferase 2 TAS RGD PMID:11827451 RGD:1359074 NCBI chr 7:2,234,195...2,242,205
Ensembl chr 7:2,234,195...2,242,205 		JBrowse link
G MSRB2 methionine sulfoxide reductase B2 EXP SMPDB SMP:00033 NCBI chr10:23,095,579...23,122,013
Ensembl chr10:23,095,579...23,122,013 		JBrowse link
G MSRB3 methionine sulfoxide reductase B3 EXP SMPDB SMP:00033 NCBI chr12:65,278,683...65,466,907
Ensembl chr12:65,278,643...65,491,430 		JBrowse link
G MTAP methylthioadenosine phosphorylase ISO
EXP		 SMPDB
RGD		 PMID:2292587 SMP:00033, RGD:7242932 NCBI chr 9:21,802,636...21,941,115
Ensembl chr 9:21,802,636...21,937,651 		JBrowse link
G MTFMT mitochondrial methionyl-tRNA formyltransferase EXP SMPDB SMP:00033 NCBI chr15:65,001,512...65,029,639
Ensembl chr15:65,001,512...65,029,639 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase TAS
EXP		 SMPDB
RGD		 PMID:11933257 SMP:00033, RGD:1535021 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISS
EXP
TAS		 SMPDB
RGD		 PMID:15845641 PMID:20814827 PMID:23073625 SMP:00033, RGD:1359026, RGD:7242426, RGD:7242425 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase TAS RGD PMID:15979034 PMID:20814827 RGD:1359037, RGD:7242426 NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025 		JBrowse link
G NNMT nicotinamide N-methyltransferase TAS RGD PMID:15922112 RGD:1359084 NCBI chr11:114,257,806...114,313,536
Ensembl chr11:114,257,787...114,313,536 		JBrowse link
G PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ISS RGD PMID:8263531 RGD:729481 NCBI chr 6:149,749,695...149,811,421
Ensembl chr 6:149,749,444...149,811,420 		JBrowse link
G PEMT phosphatidylethanolamine N-methyltransferase ISS RGD PMID:8344945 RGD:729486 NCBI chr17:17,505,563...17,592,142
Ensembl chr17:17,505,563...17,591,708 		JBrowse link
G PNMT phenylethanolamine N-methyltransferase ISS RGD PMID:12438084 RGD:1359087 NCBI chr17:39,668,019...39,670,475
Ensembl chr17:39,667,981...39,670,475 		JBrowse link
G PRMT1 protein arginine methyltransferase 1 TAS RGD PMID:15866169 PMID:21074527 RGD:1359044, RGD:7242552 NCBI chr19:49,676,153...49,688,447
Ensembl chr19:49,675,786...49,689,029 		JBrowse link
G PRMT2 protein arginine methyltransferase 2 TAS RGD PMID:21074527 RGD:7242552 NCBI chr21:46,635,674...46,665,124
Ensembl chr21:46,635,595...46,665,124 		JBrowse link
G PRMT3 protein arginine methyltransferase 3 TAS RGD PMID:21074527 RGD:7242552 NCBI chr11:20,387,716...20,509,338
Ensembl chr11:20,387,558...20,509,338 		JBrowse link
G PRMT5 protein arginine methyltransferase 5 TAS RGD PMID:15866169 PMID:21074527 RGD:1359044, RGD:7242552 NCBI chr14:22,920,529...22,929,376
Ensembl chr14:22,920,525...22,929,408 		JBrowse link
G PRMT6 protein arginine methyltransferase 6 TAS RGD PMID:15866169 PMID:21074527 RGD:1359044, RGD:7242552 NCBI chr 1:107,056,674...107,059,294
Ensembl chr 1:107,056,674...107,067,636 		JBrowse link
G PRMT7 protein arginine methyltransferase 7 TAS RGD PMID:21074527 RGD:7242552 NCBI chr16:68,311,019...68,360,870
Ensembl chr16:68,310,951...68,360,852 		JBrowse link
G RNMT RNA guanine-7 methyltransferase TAS RGD PMID:11472630 RGD:1359071 NCBI chr18:13,726,673...13,764,556
Ensembl chr18:13,726,660...13,764,556 		JBrowse link
G SETD7 SET domain containing 7, histone lysine methyltransferase TAS RGD PMID:22194015 RGD:7242554 NCBI chr 4:139,492,974...139,556,219
Ensembl chr 4:139,495,941...139,606,699 		JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 TAS RGD PMID:11959841 RGD:1359072 NCBI chr 1:150,926,263...150,964,737
Ensembl chr 1:150,926,263...150,964,744 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 EXP SMPDB SMP:00033 NCBI chr17:18,327,873...18,363,550
Ensembl chr17:18,327,873...18,363,550 		JBrowse link
G SMS spermine synthase TAS RGD PMID:23073625 RGD:7242425 NCBI chr  X:21,940,709...21,994,837
Ensembl chr  X:21,940,709...21,994,837 		JBrowse link
G SMYD2 SET and MYND domain containing 2 TAS RGD PMID:22194015 RGD:7242554 NCBI chr 1:214,281,159...214,337,131
Ensembl chr 1:214,281,102...214,337,131 		JBrowse link
G SRM spermidine synthase TAS
EXP		 SMPDB
RGD		 PMID:23073625 SMP:00033, RGD:7242425 NCBI chr 1:11,054,589...11,060,018
Ensembl chr 1:11,054,584...11,060,020 		JBrowse link
G SUV39H1 SUV39H1 histone lysine methyltransferase TAS RGD PMID:22194015 RGD:7242554 NCBI chr  X:48,695,554...48,709,016
Ensembl chr  X:48,695,554...48,709,016 		JBrowse link
G SUV39H2 SUV39H2 histone lysine methyltransferase ISS
TAS		 RGD PMID:11094092 PMID:22194015 RGD:1359810, RGD:7242554 NCBI chr10:14,878,866...14,904,315
Ensembl chr10:14,878,820...14,904,315 		JBrowse link
polyamine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMD1 adenosylmethionine decarboxylase 1 TAS RGD PMID:13678416 RGD:7244193 NCBI chr 6:110,814,617...110,895,713
Ensembl chr 6:110,874,770...110,898,879 		JBrowse link
G AZIN1 antizyme inhibitor 1 TAS RGD PMID:21849468 RGD:7244195 NCBI chr 8:102,826,302...102,864,200
Ensembl chr 8:102,826,111...102,893,864 		JBrowse link
G OAZ1 ornithine decarboxylase antizyme 1 TAS RGD PMID:21849468 RGD:7244195 NCBI chr19:2,269,486...2,273,488
Ensembl chr19:2,269,509...2,273,490 		JBrowse link
G OAZ2 ornithine decarboxylase antizyme 2 TAS RGD PMID:21849468 RGD:7244195 NCBI chr15:64,687,574...64,703,281
Ensembl chr15:64,687,573...64,703,281 		JBrowse link
G OAZ3 ornithine decarboxylase antizyme 3 TAS RGD PMID:21849468 RGD:7244195 NCBI chr 1:151,762,969...151,771,330
Ensembl chr 1:151,762,899...151,771,334 		JBrowse link
G ODC1 ornithine decarboxylase 1 TAS RGD PMID:13678416 RGD:7244193 NCBI chr 2:10,439,968...10,448,327
Ensembl chr 2:10,439,968...10,448,327 		JBrowse link
G PAOX polyamine oxidase ISO
TAS		 RGD PMID:15541750 PMID:13678416 RGD:7244190, RGD:7244193 NCBI chr10:133,379,262...133,391,694
Ensembl chr10:133,379,261...133,391,694 		JBrowse link
G SAT1 spermidine/spermine N1-acetyltransferase 1 ISO RGD PMID:15541750 RGD:7244190 NCBI chr  X:23,783,173...23,786,210
Ensembl chr  X:23,783,173...23,786,210 		JBrowse link
G SMOX spermine oxidase ISO
TAS		 RGD PMID:15541750 PMID:13678416 RGD:7244190, RGD:7244193 NCBI chr20:4,148,828...4,187,727
Ensembl chr20:4,120,980...4,187,747 		JBrowse link
G SMS spermine synthase TAS RGD PMID:13678416 RGD:7244193 NCBI chr  X:21,940,709...21,994,837
Ensembl chr  X:21,940,709...21,994,837 		JBrowse link
G SRM spermidine synthase TAS RGD PMID:13678416 RGD:7244193 NCBI chr 1:11,054,589...11,060,018
Ensembl chr 1:11,054,584...11,060,020 		JBrowse link
putrescine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMD1 adenosylmethionine decarboxylase 1 ISS RGD PMID:10430362 RGD:1578320 NCBI chr 6:110,814,617...110,895,713
Ensembl chr 6:110,874,770...110,898,879 		JBrowse link
G ODC1 ornithine decarboxylase 1 ISS RGD PMID:10430362 RGD:1578320 NCBI chr 2:10,439,968...10,448,327
Ensembl chr 2:10,439,968...10,448,327 		JBrowse link
remethylation pathway of homocysteine metabolism - cobalamin dependent term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFR methylenetetrahydrofolate reductase TAS RGD PMID:20814827 RGD:7242426 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISS
TAS		 RGD PMID:15845641 PMID:20814827 RGD:1359026, RGD:7242426 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase TAS RGD PMID:15979034 PMID:20814827 RGD:1359037, RGD:7242426 NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025 		JBrowse link
remethylation pathway of homocysteine metabolism - cobalamin independent, betaine dependent term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase EXP SMPDB SMP:00123 NCBI chr20:34,231,981...34,311,836
Ensembl chr20:34,280,268...34,311,802 		JBrowse link
G ALDH7A1 aldehyde dehydrogenase 7 family member A1 EXP SMPDB SMP:00123 NCBI chr 5:126,541,841...126,595,219
Ensembl chr 5:126,531,200...126,595,362 		JBrowse link
G BHMT betaine--homocysteine S-methyltransferase TAS
EXP		 SMPDB
RGD		 PMID:20814827 PMID:20346934 SMP:00123, RGD:7242426, RGD:7242428 NCBI chr 5:79,111,809...79,132,288
Ensembl chr 5:79,111,809...79,132,288 		JBrowse link
G CHDH choline dehydrogenase EXP SMPDB SMP:00123 NCBI chr 3:53,812,335...53,846,419
Ensembl chr 3:53,812,335...53,846,419 		JBrowse link
G MAT2A methionine adenosyltransferase 2A EXP SMPDB SMP:00123 NCBI chr 2:85,539,168...85,545,281
Ensembl chr 2:85,539,168...85,545,281 		JBrowse link
G MAT2B methionine adenosyltransferase 2 non-catalytic beta subunit EXP SMPDB SMP:00123 NCBI chr 5:163,503,064...163,519,354
Ensembl chr 5:163,503,114...163,519,558 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase EXP SMPDB SMP:00123 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278 		JBrowse link
G PEMT phosphatidylethanolamine N-methyltransferase EXP SMPDB SMP:00123 NCBI chr17:17,505,563...17,592,142
Ensembl chr17:17,505,563...17,591,708 		JBrowse link
spermidine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMD1 adenosylmethionine decarboxylase 1 ISS
EXP
ISO		 SMPDB
RGD		 PMID:10430362 PMID:1415709 PMID:10712236 SMP:00445, RGD:1578320, RGD:7242912, RGD:7242911 NCBI chr 6:110,814,617...110,895,713
Ensembl chr 6:110,874,770...110,898,879 		JBrowse link
G MAT2A methionine adenosyltransferase 2A EXP SMPDB SMP:00445 NCBI chr 2:85,539,168...85,545,281
Ensembl chr 2:85,539,168...85,545,281 		JBrowse link
G MAT2B methionine adenosyltransferase 2 non-catalytic beta subunit EXP SMPDB SMP:00445 NCBI chr 5:163,503,064...163,519,354
Ensembl chr 5:163,503,114...163,519,558 		JBrowse link
G ODC1 ornithine decarboxylase 1 ISS
EXP
ISO		 SMPDB
RGD		 PMID:10430362 PMID:2292587 PMID:1415709 SMP:00445, RGD:1578320, RGD:7242932, RGD:7242912 NCBI chr 2:10,439,968...10,448,327
Ensembl chr 2:10,439,968...10,448,327 		JBrowse link
G SAT1 spermidine/spermine N1-acetyltransferase 1 ISO RGD PMID:2292587 RGD:7242932 NCBI chr  X:23,783,173...23,786,210
Ensembl chr  X:23,783,173...23,786,210 		JBrowse link
G SMS spermine synthase EXP SMPDB SMP:00445 NCBI chr  X:21,940,709...21,994,837
Ensembl chr  X:21,940,709...21,994,837 		JBrowse link
G SRM spermidine synthase TAS
EXP
ISO		 SMPDB
RGD		 PMID:23073625 PMID:2292587 PMID:16931179 SMP:00445, RGD:7242425, RGD:7242932, RGD:7242920 NCBI chr 1:11,054,589...11,060,018
Ensembl chr 1:11,054,584...11,060,020 		JBrowse link
spermine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMD1 adenosylmethionine decarboxylase 1 ISS
EXP
ISO		 SMPDB
RGD		 PMID:10430362 PMID:1415709 PMID:10712236 SMP:00445, RGD:1578320, RGD:7242912, RGD:7242911 NCBI chr 6:110,814,617...110,895,713
Ensembl chr 6:110,874,770...110,898,879 		JBrowse link
G MAT2A methionine adenosyltransferase 2A EXP SMPDB SMP:00445 NCBI chr 2:85,539,168...85,545,281
Ensembl chr 2:85,539,168...85,545,281 		JBrowse link
G MAT2B methionine adenosyltransferase 2 non-catalytic beta subunit EXP SMPDB SMP:00445 NCBI chr 5:163,503,064...163,519,354
Ensembl chr 5:163,503,114...163,519,558 		JBrowse link
G ODC1 ornithine decarboxylase 1 ISS
EXP
ISO		 SMPDB
RGD		 PMID:10430362 PMID:2292587 PMID:1415709 SMP:00445, RGD:1578320, RGD:7242932, RGD:7242912 NCBI chr 2:10,439,968...10,448,327
Ensembl chr 2:10,439,968...10,448,327 		JBrowse link
G SAT1 spermidine/spermine N1-acetyltransferase 1 ISO RGD PMID:2292587 RGD:7242932 NCBI chr  X:23,783,173...23,786,210
Ensembl chr  X:23,783,173...23,786,210 		JBrowse link
G SMS spermine synthase TAS
EXP
ISO		 SMPDB
RGD		 PMID:23073625 PMID:2292587 SMP:00445, RGD:7242425, RGD:7242932 NCBI chr  X:21,940,709...21,994,837
Ensembl chr  X:21,940,709...21,994,837 		JBrowse link
G SRM spermidine synthase EXP SMPDB SMP:00445 NCBI chr 1:11,054,589...11,060,018
Ensembl chr 1:11,054,584...11,060,020 		JBrowse link
transsulfuration pathway of homocysteine metabolism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBS cystathionine beta-synthase TAS
EXP		 SMPDB
RGD		 PMID:20162368 SMP:00455, RGD:7242427 NCBI chr21:43,053,191...43,076,873
Ensembl chr21:43,053,191...43,076,943 		JBrowse link
G CDO1 cysteine dioxygenase type 1 TAS RGD PMID:20162368 RGD:7242427 NCBI chr 5:115,804,733...115,816,659
Ensembl chr 5:115,804,733...115,816,659 		JBrowse link
G CSAD cysteine sulfinic acid decarboxylase TAS RGD PMID:20162368 RGD:7242427 NCBI chr12:53,157,663...53,181,351
Ensembl chr12:53,157,663...53,180,925 		JBrowse link
G CTH cystathionine gamma-lyase TAS
EXP		 SMPDB
RGD		 PMID:20162368 SMP:00455, RGD:7242427 NCBI chr 1:70,411,268...70,439,851
Ensembl chr 1:70,411,218...70,439,851 		JBrowse link
Term paths to the root
Path 1
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  pathway 5957
    regulatory pathway 3600
      homeostasis pathway 1667
        organic chemical homeostasis pathway 429
          S-adenosylmethionine homeostasis pathway 277
            DNA modification pathway + 28
            folate metabolic pathway + 43
            histone modification pathway + 173
            homocysteine metabolic pathway + 32
            methionine cycle/metabolic pathway + 51
            polyamine metabolic pathway + 13
            radical SAM enzyme mediated metabolic pathway + 0
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