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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:S-adenosylmethionine homeostasis pathway
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Accession:PW:0001693 term browser browse the term
Definition:Those pathways that involve the balanced generation and utilization of S-adenosylmethionine (AdoMet or SAM). SAM is a universal methyl donor and at the cross roads of metabolism, gene expression regulation and cellular signaling.
Synonyms:related_synonym: AdoMet homeostasis pathway;   SAM homeostasis pathway


show annotations for term's descendants           Sort by:
altered DNA modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase ISO in silico assessment of loss of DNA-protein interactions and observed enhancement of DNA repair capacity (DRC) in the context of nucleotide excision repair (NER) pathway for SNP RGD PMID:24004570 RGD:9588971 NCBI chr 4:148,893,049...148,904,833
Ensembl chr 4:148,894,280...148,904,982 		JBrowse link
altered folate cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465 		JBrowse link
G Dhfr dihydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
G Folr1 folate receptor alpha ISO RGD PMID:22108709 RGD:7242557 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22108709 PMID:22108709 RGD:7242557, RGD:7242557 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425 		JBrowse link
G Slc46a1 solute carrier family 46 member 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr10:63,361,504...63,367,940
Ensembl chr10:63,361,486...63,368,848 		JBrowse link
altered folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:22353665 RGD:7242562 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22353665 RGD:7242562 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
DNA modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxxc1 CXXC finger protein 1 ISO RGD PMID:23697932 RGD:9479164 NCBI chr18:67,813,185...67,818,556
Ensembl chr18:67,813,206...67,818,551 		JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 3:142,130,588...142,169,128
Ensembl chr 3:142,130,592...142,169,124 		JBrowse link
G Ebf1 EBF transcription factor 1 ISO RGD PMID:24825349 RGD:8695944 NCBI chr10:29,095,858...29,489,142
Ensembl chr10:29,099,933...29,487,665 		JBrowse link
G Kdm2a lysine demethylase 2A ISO RGD PMID:23697932 RGD:9479164 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Kdm2b lysine demethylase 2B ISO RGD PMID:23697932 RGD:9479164 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
G Kmt2a lysine methyltransferase 2A ISO RGD PMID:23697932 RGD:9479164 NCBI chr 8:45,116,763...45,193,320
Ensembl chr 8:45,118,814...45,193,181 		JBrowse link
G Kmt2c lysine methyltransferase 2C ISO RGD PMID:23697932 RGD:9479164 NCBI chr 4:9,620,638...9,834,787
Ensembl chr 4:9,609,627...9,833,539 		JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 ISO RGD PMID:23324617 RGD:8695954 NCBI chr18:67,869,870...67,884,501
Ensembl chr18:67,869,992...67,886,554 		JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chr18:64,174,002...64,240,795
Ensembl chr18:64,174,002...64,240,794 		JBrowse link
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase ISO RGD PMID:23324617 RGD:8695954 NCBI chr 4:148,893,049...148,904,833
Ensembl chr 4:148,894,280...148,904,982 		JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Nanog Nanog homeobox ISO RGD PMID:24825349 RGD:8695944 NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:24825349 RGD:8695944 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISO RGD PMID:24825349 RGD:8695944 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Prdm14 PR/SET domain 14 ISO RGD PMID:24825349 RGD:8695944 NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712 		JBrowse link
G Sin3a SIN3 transcription regulator family member A ISO RGD PMID:24825349 RGD:8695944 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192 		JBrowse link
G Spi1 Spi-1 proto-oncogene ISO RGD PMID:24825349 RGD:8695944 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393 		JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 ISO RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr20:25,761,042...25,840,926
Ensembl chr20:25,768,120...25,833,052 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 ISO RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 2:221,988,645...222,072,813
Ensembl chr 2:221,988,645...222,072,534 		JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 ISO RGD PMID:22770212 PMID:23697932 PMID:24825349 RGD:8695943, RGD:9479164, RGD:8695944 NCBI chr 4:115,867,412...115,964,433
Ensembl chr 4:115,871,265...115,964,193 		JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 ISO RGD PMID:23324617 RGD:8695954 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631 		JBrowse link
G Uhrf2 ubiquitin like with PHD and ring finger domains 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chr 1:227,814,639...227,877,907
Ensembl chr 1:227,814,963...227,877,904 		JBrowse link
G Zbtb33 zinc finger and BTB domain containing 33 ISO RGD PMID:23324617 RGD:8695954 NCBI chr  X:116,963,337...116,970,547
Ensembl chr  X:116,963,347...116,971,023 		JBrowse link
G Zbtb38 zinc finger and BTB domain containing 38 ISO RGD PMID:23324617 RGD:8695954 NCBI chr 8:97,284,617...97,288,518
Ensembl chr 8:97,280,993...97,485,625 		JBrowse link
G Zbtb4 zinc finger and BTB domain containing 4 ISO RGD PMID:23324617 RGD:8695954 NCBI chr10:54,480,698...54,501,492
Ensembl chr10:54,485,071...54,501,492 		JBrowse link
G Zfp57 zinc finger protein 57 ISO RGD PMID:23324617 RGD:8695954 NCBI chr20:1,521,323...1,534,884
Ensembl chr20:1,521,323...1,529,846 		JBrowse link
folate cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465 		JBrowse link
G Amt aminomethyltransferase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 8:108,981,620...108,988,127
Ensembl chr 8:108,976,472...108,988,126 		JBrowse link
G Dhfr dihydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
G Dld dihydrolipoamide dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 6:47,904,153...47,924,814
Ensembl chr 6:47,903,914...47,924,795 		JBrowse link
G Dmgdh dimethylglycine dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 2:24,912,600...24,987,533
Ensembl chr 2:24,912,578...24,987,528 		JBrowse link
G Folh1 folate hydrolase 1 ISO RGD PMID:20814827 PMID:16859665 RGD:7242426, RGD:7242559 NCBI chr 1:140,428,101...140,501,563
Ensembl chr 1:140,428,101...140,501,379 		JBrowse link
G Folr1 folate receptor alpha ISO RGD PMID:22108709 RGD:7242557 NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667 		JBrowse link
G Folr2 folate receptor beta ISO RGD PMID:22108709 RGD:7242557 NCBI chr 1:156,200,044...156,218,380
Ensembl chr 1:156,200,060...156,205,724 		JBrowse link
G Fpgs folylpolyglutamate synthase ISO RGD PMID:16859665 RGD:7242559 NCBI chr 3:15,972,800...15,993,592
Ensembl chr 3:15,972,800...15,993,563 		JBrowse link
G Gcsh glycine cleavage system protein H ISO RGD PMID:20645850 RGD:7242560 NCBI chr19:45,036,013...45,046,770
Ensembl chr19:45,036,011...45,046,792 		JBrowse link
G Ggh gamma-glutamyl hydrolase TAS RGD PMID:16859665 RGD:7242559 NCBI chr 5:33,529,880...33,552,790
Ensembl chr 5:33,529,880...33,552,787 		JBrowse link
G Gldc glycine decarboxylase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 1:227,883,249...227,962,119
Ensembl chr 1:227,883,249...227,962,097 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like ISO RGD PMID:22108709 RGD:7242557 NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905 		JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO RGD PMID:20645850 PMID:22108709 RGD:7242560, RGD:7242557 NCBI chr 4:115,811,135...115,822,663
Ensembl chr 4:115,811,139...115,822,608 		JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like ISO RGD PMID:22108709 RGD:7242557 NCBI chr14:17,089,947...17,170,036
Ensembl chr14:17,089,952...17,170,112 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22108709 RGD:7242557 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425 		JBrowse link
G Sardh sarcosine dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 3:10,510,553...10,575,342
Ensembl chr 3:10,510,553...10,573,874 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 ISO RGD PMID:20645850 PMID:22108709 RGD:7242560, RGD:7242557 NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236 		JBrowse link
G Slc19a1 solute carrier family 19 member 1 ISO RGD PMID:22108709 PMID:20814827 RGD:7242557, RGD:7242426 NCBI chr20:11,584,410...11,602,429
Ensembl chr20:11,584,411...11,601,972 		JBrowse link
G Slc25a32 solute carrier family 25 member 32 ISO RGD PMID:22332074 RGD:7242561 NCBI chr 7:70,142,958...70,160,726
Ensembl chr 7:70,142,964...70,160,770 		JBrowse link
G Slc46a1 solute carrier family 46 member 1 ISO RGD PMID:22108709 PMID:20814827 RGD:7242557, RGD:7242426 NCBI chr10:63,361,504...63,367,940
Ensembl chr10:63,361,486...63,368,848 		JBrowse link
folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 IEA
TAS		 KEGG
RGD		 PMID:14729668 rno:00670, RGD:1547843 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465 		JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 IEA KEGG rno:00670 NCBI chr 7:20,254,246...20,305,793
Ensembl chr 7:20,254,233...20,305,776 		JBrowse link
G Amt aminomethyltransferase IEA KEGG rno:00670 NCBI chr 8:108,981,620...108,988,127
Ensembl chr 8:108,976,472...108,988,126 		JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IEA
ISO
IDA		 KEGG
RGD		 PMID:22332074 PMID:9332377 rno:00670, RGD:7242561, RGD:70804 NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889 		JBrowse link
G Dhfr dihydrofolate reductase IDA
ISO
IEA		 KEGG
RGD		 PMID:11502523 PMID:22332074 rno:00670, RGD:1298877, RGD:7242561 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
G Dmgdh dimethylglycine dehydrogenase TAS RGD PMID:15358367 RGD:1547831 NCBI chr 2:24,912,600...24,987,533
Ensembl chr 2:24,912,578...24,987,528 		JBrowse link
G Folh1 folate hydrolase 1 TAS RGD PMID:9501243 RGD:728645 NCBI chr 1:140,428,101...140,501,563
Ensembl chr 1:140,428,101...140,501,379 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase IEA KEGG rno:00670 NCBI chr20:12,055,203...12,068,717
Ensembl chr20:12,055,208...12,068,735 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO
IEA		 KEGG
RGD		 PMID:12450384 PMID:22332074 rno:00670, RGD:1547842, RGD:7242561 NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125 		JBrowse link
G Gnmt glycine N-methyltransferase TAS RGD PMID:8278367 RGD:1545057 NCBI chr 9:14,254,675...14,258,028
Ensembl chr 9:14,254,675...14,258,434 		JBrowse link
G Mtfmt mitochondrial methionyl-tRNA formyltransferase IEA KEGG rno:00670 NCBI chr 8:65,953,787...65,971,841
Ensembl chr 8:65,953,767...65,971,841 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 IEA
ISO
TAS		 KEGG
RGD		 PMID:22332074 PMID:2186031 rno:00670, RGD:7242561, RGD:1299513 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like IEA KEGG rno:00670 NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905 		JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO
IEA		 KEGG
RGD		 PMID:9454603 rno:00670, RGD:1540378 NCBI chr 4:115,811,135...115,822,663
Ensembl chr 4:115,811,139...115,822,608 		JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like IEA KEGG rno:00670 NCBI chr14:17,089,947...17,170,036
Ensembl chr14:17,089,952...17,170,112 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO
IEA		 KEGG
RGD		 PMID:11933257 PMID:22332074 rno:00670, RGD:1535021, RGD:7242561 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Mthfs methenyltetrahydrofolate synthetase IEA KEGG rno:00670 NCBI chr 8:89,729,498...89,801,998
Ensembl chr 8:89,729,508...89,799,089 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IEA
ISO
IDA		 KEGG
RGD		 PMID:20814827 PMID:15845641 rno:00670, RGD:7242426, RGD:1359026 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 TAS
ISO
IEA
IDA		 KEGG
RGD		 PMID:15671219 PMID:22332074 PMID:3110140 rno:00670, RGD:1359815, RGD:7242561, RGD:2300383 NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 TAS
ISO
IEA
IDA		 KEGG
RGD		 PMID:15671219 PMID:22332074 PMID:3110140 rno:00670, RGD:1359815, RGD:7242561, RGD:2300383 NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236 		JBrowse link
G Tyms thymidylate synthetase IEA
ISO
IDA		 KEGG
RGD		 PMID:22332074 PMID:9894005 rno:00670, RGD:7242561, RGD:1545055 NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536 		JBrowse link
folate metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akp3 alkaline phosphatase 3, intestine, not Mn requiring IEA KEGG rno:00790 NCBI chr 9:87,804,680...87,808,715
Ensembl chr 9:87,804,749...87,807,913 		JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 TAS
ISO		 SMPDB
RGD		 PMID:14729668 SMP:00053, RGD:1547843 NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465 		JBrowse link
G Alpi alkaline phosphatase, intestinal IEA KEGG rno:00790 NCBI chr 9:87,773,411...87,776,877
Ensembl chr 9:87,773,411...87,776,877 		JBrowse link
G Alpl alkaline phosphatase, biomineralization associated IEA KEGG rno:00790 NCBI chr 5:149,951,397...150,006,424
Ensembl chr 5:149,951,409...150,006,446 		JBrowse link
G Dhfr dihydrofolate reductase IDA
ISO
IEA		 SMPDB
KEGG
RGD		 PMID:11502523 SMP:00053 rno:00790, RGD:1298877 NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713 		JBrowse link
G Dmgdh dimethylglycine dehydrogenase TAS RGD PMID:15358367 RGD:1547831 NCBI chr 2:24,912,600...24,987,533
Ensembl chr 2:24,912,578...24,987,528 		JBrowse link
G Folh1 folate hydrolase 1 ISO RGD PMID:9816319 RGD:151347637 NCBI chr 1:140,428,101...140,501,563
Ensembl chr 1:140,428,101...140,501,379 		JBrowse link
G Folr2 folate receptor beta ISO RGD PMID:8445646 RGD:1540379 NCBI chr 1:156,200,044...156,218,380
Ensembl chr 1:156,200,060...156,205,724 		JBrowse link
G Fpgs folylpolyglutamate synthase IEA
ISO		 KEGG
SMPDB		 SMP:00053 rno:00790 NCBI chr 3:15,972,800...15,993,592
Ensembl chr 3:15,972,800...15,993,563 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase ISO SMPDB SMP:00053 NCBI chr20:12,055,203...12,068,717
Ensembl chr20:12,055,208...12,068,735 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:12450384 RGD:1547842 NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125 		JBrowse link
G Gch1 GTP cyclohydrolase 1 IEA KEGG rno:00790 NCBI chr15:20,404,267...20,437,727
Ensembl chr15:20,402,527...20,437,698 		JBrowse link
G Ggh gamma-glutamyl hydrolase IEA
ISO		 KEGG
SMPDB		 SMP:00053 rno:00790 NCBI chr 5:33,529,880...33,552,790
Ensembl chr 5:33,529,880...33,552,787 		JBrowse link
G Gnmt glycine N-methyltransferase TAS RGD PMID:15347642 RGD:1359070 NCBI chr 9:14,254,675...14,258,028
Ensembl chr 9:14,254,675...14,258,434 		JBrowse link
G Mocs1 molybdenum cofactor synthesis 1 IEA KEGG rno:00790 NCBI chr 9:11,547,533...11,573,935
Ensembl chr 9:11,547,531...11,567,790 		JBrowse link
G Mocs2 molybdenum cofactor synthesis 2 IEA KEGG rno:00790 NCBI chr 2:46,504,588...46,516,327
Ensembl chr 2:46,504,588...46,516,324 		JBrowse link
G Mtfmt mitochondrial methionyl-tRNA formyltransferase ISO SMPDB SMP:00053 NCBI chr 8:65,953,787...65,971,841
Ensembl chr 8:65,953,767...65,971,841 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 TAS
ISO		 SMPDB
RGD		 PMID:2186031 SMP:00053, RGD:1299513 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like ISO SMPDB SMP:00053 NCBI chr 1:40,443,926...40,632,911
Ensembl chr 1:40,444,008...40,632,905 		JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO SMPDB
RGD		 PMID:9454603 SMP:00053, RGD:1540378 NCBI chr 4:115,811,135...115,822,663
Ensembl chr 4:115,811,139...115,822,608 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO SMPDB
RGD		 PMID:11933257 SMP:00053, RGD:1535021 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Mthfs methenyltetrahydrofolate synthetase ISO SMPDB SMP:00053 NCBI chr 8:89,729,498...89,801,998
Ensembl chr 8:89,729,508...89,799,089 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IDA RGD PMID:15845641 RGD:1359026 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:15979034 RGD:1359037 NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425 		JBrowse link
G Pts 6-pyruvoyl-tetrahydropterin synthase IEA KEGG rno:00790 NCBI chr 8:50,870,838...50,877,869
Ensembl chr 8:50,870,841...50,877,869 		JBrowse link
G Qdpr quinoid dihydropteridine reductase IEA KEGG rno:00790 NCBI chr14:65,670,251...65,683,853
Ensembl chr14:65,670,131...65,683,854 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 TAS RGD PMID:15671219 RGD:1359815 NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 TAS RGD PMID:15671219 RGD:1359815 NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236 		JBrowse link
G Slc19a1 solute carrier family 19 member 1 TAS RGD PMID:11600421 RGD:735239 NCBI chr20:11,584,410...11,602,429
Ensembl chr20:11,584,411...11,601,972 		JBrowse link
G Slc46a1 solute carrier family 46 member 1 ISO SMPDB SMP:00053 NCBI chr10:63,361,504...63,367,940
Ensembl chr10:63,361,486...63,368,848 		JBrowse link
G Spr sepiapterin reductase IEA KEGG rno:00790 NCBI chr 4:117,671,948...117,676,292
Ensembl chr 4:117,671,949...117,675,678 		JBrowse link
G Tyms thymidylate synthetase IDA RGD PMID:9894005 RGD:1545055 NCBI chr 9:113,313,454...113,329,551
Ensembl chr 9:113,313,452...113,329,536 		JBrowse link
histone modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aebp2 AE binding protein 2 ISO RGD PMID:24148750 RGD:9479059 NCBI chr 4:173,527,881...173,566,033
Ensembl chr 4:173,528,344...173,593,100 		JBrowse link
G Aplf aprataxin and PNKP like factor ISO RGD PMID:23288364 RGD:9068945 NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633 		JBrowse link
G Asf1a anti-silencing function 1A histone chaperone ISO RGD PMID:23288364 RGD:9068945 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808 		JBrowse link
G Asf1b anti-silencing function 1B histone chaperone ISO RGD PMID:23288364 RGD:9068945 NCBI chr19:24,181,024...24,195,604
Ensembl chr19:24,181,028...24,195,549 		JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chr 2:174,346,267...174,483,057
Ensembl chr 2:174,346,150...174,483,055 		JBrowse link
G Ash2l ASH2 like histone lysine methyltransferase complex subunit ISO RGD PMID:22663077 RGD:9479053 NCBI chr16:66,242,205...66,264,064
Ensembl chr16:66,242,212...66,264,061 		JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 ISO RGD PMID:24647359 RGD:9479061 NCBI chr16:6,446,709...6,455,535
Ensembl chr16:6,446,709...6,455,535 		JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 ISO RGD PMID:23642229 RGD:9479074 NCBI chr10:103,072,530...103,081,382
Ensembl chr10:103,073,408...103,081,380 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690 		JBrowse link
G Bptf bromodomain PHD finger transcription factor ISO RGD PMID:24686119 PMID:23642229 RGD:9479075, RGD:9479074 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 ISO RGD PMID:24647359 RGD:9479061 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080 		JBrowse link
G Brd1 bromodomain containing 1 ISO RGD PMID:24686119 RGD:9479075 NCBI chr 7:119,774,187...119,822,032
Ensembl chr 7:119,774,188...119,822,031 		JBrowse link
G Brd2 bromodomain containing 2 ISO RGD PMID:24686119 RGD:9479075 NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388 		JBrowse link
G Brd3 bromodomain containing 3 ISO RGD PMID:24686119 RGD:9479075 NCBI chr 3:10,773,163...10,829,675
Ensembl chr 3:10,775,272...10,829,577 		JBrowse link
G Brd4 bromodomain containing 4 ISO RGD PMID:24686119 RGD:9479075 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539 		JBrowse link
G Brd7 bromodomain containing 7 ISO RGD PMID:24686119 RGD:9479075 NCBI chr19:18,708,792...18,737,497
Ensembl chr19:18,709,022...18,737,494 		JBrowse link
G Brdt bromodomain testis associated ISO RGD PMID:24686119 RGD:9479075 NCBI chr14:2,387,372...2,445,857
Ensembl chr14:2,387,796...2,445,842 		JBrowse link
G Brf1 BRF1, RNA polymerase III transcription initiation factor subunit ISO RGD PMID:23642229 RGD:9479074 NCBI chr 6:132,034,378...132,081,313
Ensembl chr 6:132,037,272...132,081,278 		JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 ISO RGD PMID:24583552 RGD:9479047 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689 		JBrowse link
G Cbx2 chromobox 2 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr10:104,278,517...104,287,384
Ensembl chr10:104,278,549...104,287,383 		JBrowse link
G Cbx4 chromobox 4 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr10:104,337,140...104,343,210
Ensembl chr10:104,336,876...104,356,706 		JBrowse link
G Cbx5 chromobox 5 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 7:134,333,165...134,376,102
Ensembl chr 7:134,331,335...134,375,022 		JBrowse link
G Cbx6 chromobox 6 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 7:111,372,979...111,383,026
Ensembl chr 7:111,372,980...111,383,091 		JBrowse link
G Cbx7 chromobox 7 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 7:111,460,656...111,479,231
Ensembl chr 7:111,460,656...111,477,973 		JBrowse link
G Cbx8 chromobox 8 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr10:104,294,518...104,296,956
Ensembl chr10:104,294,518...104,297,024 		JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A ISO RGD PMID:23288364 RGD:9068945 NCBI chr 9:873,953...900,701
Ensembl chr 9:874,051...900,654 		JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B ISO RGD PMID:23288364 RGD:9068945 NCBI chr11:33,200,894...33,221,076
Ensembl chr11:33,200,981...33,221,070 		JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 1:56,661,743...56,729,119
Ensembl chr 1:56,664,054...56,728,125 		JBrowse link
G Crebbp CREB binding protein ISO RGD PMID:21151613 PMID:24686119 RGD:9104959, RGD:9479075 NCBI chr10:11,335,551...11,461,888
Ensembl chr10:11,335,953...11,461,888 		JBrowse link
G Cxxc1 CXXC finger protein 1 ISO RGD PMID:22663077 RGD:9479053 NCBI chr18:67,813,185...67,818,556
Ensembl chr18:67,813,206...67,818,551 		JBrowse link
G Daxx death-domain associated protein ISO RGD PMID:23288364 RGD:9068945 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843 		JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chr 7:8,918,764...8,959,474
Ensembl chr 7:8,917,786...8,956,475 		JBrowse link
G Dpf3 double PHD fingers 3 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 6:102,841,403...103,125,558
Ensembl chr 6:102,846,029...103,125,493 		JBrowse link
G Dpy30 dpy-30 histone methyltransferase complex regulatory subunit ISO RGD PMID:22663077 RGD:9479053 NCBI chr 6:21,120,947...21,141,720
Ensembl chr 6:21,120,947...21,141,432 		JBrowse link
G Eed embryonic ectoderm development ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr 1:143,867,875...143,895,008
Ensembl chr 1:143,867,875...143,894,974 		JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 3:7,580,680...7,729,046
Ensembl chr 3:7,580,683...7,729,007 		JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 ISO RGD PMID:23200123 PMID:23642229 RGD:7242632, RGD:9479074 NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547 		JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO RGD PMID:23200123 PMID:24148750 PMID:23473600 RGD:7242632, RGD:9479059, RGD:9479058 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362 		JBrowse link
G H2ax H2A.X variant histone ISO RGD PMID:24614311 RGD:9075965 NCBI chr 8:44,671,907...44,673,262
Ensembl chr 8:44,671,786...44,673,239 		JBrowse link
G H2az1 H2A.Z variant histone 1 ISO RGD PMID:24696452 RGD:9074213 NCBI chr 2:226,355,668...226,357,984
Ensembl chr 2:226,355,708...226,358,485 		JBrowse link
G H3f3a H3.3 histone A ISO RGD PMID:24614311 RGD:9075965 NCBI chr13:92,533,289...92,544,902
Ensembl chr13:92,533,298...92,544,908 		JBrowse link
G H3f3b H3.3 histone B ISO RGD PMID:24614311 RGD:9075965 NCBI chr10:101,256,484...101,258,716
Ensembl chr10:101,256,480...101,258,709 		JBrowse link
G Hat1 histone acetyltransferase 1 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 3:56,217,344...56,265,021
Ensembl chr 3:56,217,342...56,275,517 		JBrowse link
G Hcfc1 host cell factor C1 ISO RGD PMID:22663077 RGD:9479053 NCBI chr  X:151,687,779...151,712,688
Ensembl chr  X:151,687,779...151,712,638 		JBrowse link
G Hdac1 histone deacetylase 1 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111 		JBrowse link
G Hdac10 histone deacetylase 10 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 7:120,199,126...120,205,850
Ensembl chr 7:120,199,129...120,204,228 		JBrowse link
G Hdac11 histone deacetylase 11 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 4:123,645,873...123,667,407
Ensembl chr 4:123,650,157...123,667,405 		JBrowse link
G Hdac2 histone deacetylase 2 ISO RGD PMID:21151613 RGD:9104959 NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609 		JBrowse link
G Hdac3 histone deacetylase 3 ISO RGD PMID:21151613 RGD:9104959 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856 		JBrowse link
G Hdac4 histone deacetylase 4 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164 		JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:21151613 RGD:9104959 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235 		JBrowse link
G Hdac6 histone deacetylase 6 ISO RGD PMID:21151613 RGD:9104959 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441 		JBrowse link
G Hdac7 histone deacetylase 7 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 7:128,923,918...128,961,926
Ensembl chr 7:128,923,920...128,962,072 		JBrowse link
G Hdac8 histone deacetylase 8 ISO RGD PMID:21151613 RGD:9104959 NCBI chr  X:67,385,288...67,593,014
Ensembl chr  X:67,385,289...67,592,923 		JBrowse link
G Hdac9 histone deacetylase 9 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333 		JBrowse link
G Hira histone cell cycle regulator ISO RGD PMID:23288364 RGD:9068945 NCBI chr11:82,024,469...82,133,212
Ensembl chr11:82,024,469...82,133,529 		JBrowse link
G Hjurp Holliday junction recognition protein ISO RGD PMID:23288364 RGD:9068945 NCBI chr 9:88,853,379...88,867,730
Ensembl chr 9:88,853,386...88,867,728 		JBrowse link
G Ing2 inhibitor of growth family, member 2 ISO RGD PMID:23642229 RGD:9479074 NCBI chr16:44,573,592...44,584,180
Ensembl chr16:44,575,597...44,583,482 		JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690 		JBrowse link
G Jmjd1c jumonji domain containing 1C ISO RGD PMID:23200123 RGD:7242632 NCBI chr20:21,332,147...21,494,220
Ensembl chr20:21,332,147...21,463,122 		JBrowse link
G Kat2a lysine acetyltransferase 2A ISO RGD PMID:21151613 PMID:23642229 RGD:9104959, RGD:9479074 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Kat2b lysine acetyltransferase 2B ISO RGD PMID:21151613 RGD:9104959 NCBI chr 9:6,562,525...6,667,064
Ensembl chr 9:6,562,288...6,667,064 		JBrowse link
G Kat5 lysine acetyltransferase 5 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458 		JBrowse link
G Kat6a lysine acetyltransferase 6A ISO RGD PMID:21151613 RGD:9104959 NCBI chr16:69,084,914...69,165,923
Ensembl chr16:69,084,914...69,163,606 		JBrowse link
G Kat6b lysine acetyltransferase 6B ISO RGD PMID:21151613 RGD:9104959 NCBI chr15:2,638,885...2,811,977
Ensembl chr15:2,639,200...2,812,316 		JBrowse link
G Kat7 lysine acetyltransferase 7 ISO RGD PMID:21151613 RGD:9104959 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567 		JBrowse link
G Kat8 lysine acetyltransferase 8 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633 		JBrowse link
G Kdm1a lysine demethylase 1A ISO RGD PMID:23200123 RGD:7242632 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319 		JBrowse link
G Kdm1b lysine demethylase 1B ISO RGD PMID:23200123 RGD:7242632 NCBI chr17:17,602,961...17,643,865
Ensembl chr17:17,602,961...17,643,800 		JBrowse link
G Kdm2a lysine demethylase 2A ISO RGD PMID:23200123 RGD:7242632 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Kdm2b lysine demethylase 2B ISO RGD PMID:23200123 RGD:7242632 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
G Kdm3a lysine demethylase 3A ISO RGD PMID:23200123 RGD:7242632 NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073 		JBrowse link
G Kdm3b lysine demethylase 3B ISO RGD PMID:23200123 RGD:7242632 NCBI chr18:26,380,859...26,436,701
Ensembl chr18:26,380,964...26,436,628 		JBrowse link
G Kdm4a lysine demethylase 4A ISO RGD PMID:23200123 PMID:23642229 PMID:24035451 RGD:7242632, RGD:9479074, RGD:9479148 NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501 		JBrowse link
G Kdm4b lysine demethylase 4B ISO RGD PMID:23200123 RGD:7242632 NCBI chr 9:1,158,737...1,237,233
Ensembl chr 9:1,158,752...1,236,543 		JBrowse link
G Kdm4c lysine demethylase 4C ISO RGD PMID:23200123 RGD:7242632 NCBI chr 5:88,100,710...88,306,821
Ensembl chr 5:88,100,733...88,306,818 		JBrowse link
G Kdm4d lysine demethylase 4D ISO RGD PMID:23200123 RGD:7242632 NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290 		JBrowse link
G Kdm5a lysine demethylase 5A ISO RGD PMID:23200123 RGD:7242632 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422 		JBrowse link
G Kdm5b lysine demethylase 5B ISO RGD PMID:23200123 RGD:7242632 NCBI chr13:46,001,589...46,073,868
Ensembl chr13:46,002,542...46,073,872 		JBrowse link
G Kdm5c lysine demethylase 5C ISO RGD PMID:23200123 RGD:7242632 NCBI chr  X:21,345,459...21,387,045
Ensembl chr  X:21,345,481...21,381,870 		JBrowse link
G Kdm5d lysine demethylase 5D ISO RGD PMID:23200123 RGD:7242632 NCBI chr  Y:527,069...624,019
Ensembl chr  Y:530,401...624,018 		JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:22663077 PMID:23200123 RGD:7242632 RGD:9479053 NCBI chr  X:4,337,466...4,477,100
Ensembl chr  X:4,337,750...4,477,062 		JBrowse link
G Kdm6b lysine demethylase 6B ISO RGD PMID:23200123 RGD:7242632 NCBI chr10:54,120,716...54,142,212
Ensembl chr10:54,121,848...54,130,794 		JBrowse link
G Kdm7a lysine demethylase 7A ISO RGD PMID:23200123 RGD:7242632 NCBI chr 4:67,899,407...67,974,264
Ensembl chr 4:67,904,307...67,966,998 		JBrowse link
G Kdm8 lysine demethylase 8 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 1:180,013,969...180,028,829
Ensembl chr 1:180,020,656...180,028,841 		JBrowse link
G Kmt2a lysine methyltransferase 2A ISO RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr 8:45,116,763...45,193,320
Ensembl chr 8:45,118,814...45,193,181 		JBrowse link
G Kmt2b lysine methyltransferase 2B ISO RGD PMID:23200123 RGD:7242632 NCBI chr 1:85,821,700...85,840,987
Ensembl chr 1:85,821,753...85,841,326 		JBrowse link
G Kmt2c lysine methyltransferase 2C ISO RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr 4:9,620,638...9,834,787
Ensembl chr 4:9,609,627...9,833,539 		JBrowse link
G Kmt2d lysine methyltransferase 2D ISO RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr 7:129,980,744...130,022,088
Ensembl chr 7:129,962,887...130,020,325 		JBrowse link
G Kmt2e lysine methyltransferase 2E ISO RGD PMID:23200123 RGD:7242632 NCBI chr 4:11,658,218...11,727,373
Ensembl chr 4:11,658,979...11,727,373 		JBrowse link
G Kmt5a lysine methyltransferase 5A ISO RGD PMID:23200123 RGD:7242632 NCBI chr12:32,139,353...32,167,777
Ensembl chr12:32,139,178...32,162,711 		JBrowse link
G Kmt5al1 lysine methyltransferase 5A like 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 2:142,289,672...142,292,195 JBrowse link
G Kmt5b lysine methyltransferase 5B ISO RGD PMID:23200123 RGD:7242632 NCBI chr 1:201,000,444...201,049,819
Ensembl chr 1:201,000,444...201,049,819 		JBrowse link
G Kmt5c lysine methyltransferase 5C ISO RGD PMID:23200123 RGD:7242632 NCBI chr 1:69,099,531...69,107,145
Ensembl chr 1:69,099,539...69,107,145 		JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 3:151,597,903...151,633,657
Ensembl chr 3:151,602,980...151,631,233 		JBrowse link
G Lbr lamin B receptor ISO RGD PMID:24035451 RGD:9479148 NCBI chr13:93,539,386...93,564,026
Ensembl chr13:93,538,920...93,564,017 		JBrowse link
G LOC100911617 protein arginine N-methyltransferase 6-like ISO RGD PMID:24583552 RGD:9479047
G Macroh2a1 macroH2A.1 histone ISO RGD PMID:24696452 RGD:9074213 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072 		JBrowse link
G Macroh2a2 macroH2A.2 histone ISO RGD PMID:24696452 RGD:9074213 NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891 		JBrowse link
G Mcph1 microcephalin 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chr16:71,021,855...71,224,067
Ensembl chr16:71,024,588...71,224,122 		JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chr20:2,893,693...2,912,394
Ensembl chr20:2,895,505...2,910,240 		JBrowse link
G Men1 menin 1 ISO RGD PMID:22663077 RGD:9479053 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Mtf2 metal response element binding transcription factor 2 ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr14:1,639,256...1,683,513
Ensembl chr14:1,640,746...1,683,524 		JBrowse link
G Mysm1 myb-like, SWIRM and MPN domains 1 ISO RGD PMID:24647359 RGD:9479061 NCBI chr 5:109,761,345...109,826,652
Ensembl chr 5:109,776,286...109,819,967 		JBrowse link
G Nap1l1 nucleosome assembly protein 1-like 1 ISO RGD PMID:23288364 RGD:9068945 NCBI chr 7:46,933,278...46,957,853
Ensembl chr 7:46,933,356...46,956,593 		JBrowse link
G Nasp nuclear autoantigenic sperm protein ISO RGD PMID:23288364 RGD:9068945 NCBI chr 5:130,057,363...130,083,003
Ensembl chr 5:130,057,363...130,082,928 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 ISO RGD PMID:22663077 RGD:9479053 NCBI chr 3:143,890,896...143,961,916
Ensembl chr 3:143,890,896...143,952,268 		JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chr17:9,311,963...9,426,373
Ensembl chr17:9,315,237...9,425,358 		JBrowse link
G Nsd3 nuclear receptor binding SET domain protein 3 ISO RGD PMID:23200123 RGD:7242632 NCBI chr16:66,354,030...66,466,202
Ensembl chr16:66,358,973...66,465,423 		JBrowse link
G Orc1 origin recognition complex, subunit 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 5:123,324,273...123,348,375
Ensembl chr 5:123,324,315...123,348,375 		JBrowse link
G Pagr1 Paxip1-associated glutamate-rich protein 1 ISO RGD PMID:22663077 RGD:9479053 NCBI chr 1:181,622,698...181,625,024 JBrowse link
G Paxip1 PAX interacting protein 1 ISO RGD PMID:22663077 RGD:9479053 NCBI chr 4:7,525,132...7,576,659
Ensembl chr 4:7,525,004...7,576,548 		JBrowse link
G Pbrm1 polybromo 1 ISO RGD PMID:24686119 RGD:9479075 NCBI chr16:6,213,507...6,312,895
Ensembl chr16:6,213,300...6,311,780 		JBrowse link
G Pcgf1 polycomb group ring finger 1 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 4:115,576,165...115,587,019
Ensembl chr 4:115,583,867...115,587,008 		JBrowse link
G Pcgf2 polycomb group ring finger 2 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chr10:82,682,563...82,694,563
Ensembl chr10:82,683,553...82,693,406 		JBrowse link
G Pcgf3 polycomb group ring finger 3 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr14:1,237,594...1,291,717
Ensembl chr14:1,233,947...1,291,793 		JBrowse link
G Pcgf5 polycomb group ring finger 5 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 1:234,063,854...234,180,022
Ensembl chr 1:234,063,892...234,175,315 		JBrowse link
G Pcgf6 polycomb group ring finger 6 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 1:245,925,354...245,944,964
Ensembl chr 1:245,925,360...245,944,914 		JBrowse link
G Phc1 polyhomeotic homolog 1 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 4:155,510,274...155,532,636
Ensembl chr 4:155,510,274...155,533,959 		JBrowse link
G Phc2 polyhomeotic homolog 2 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 5:141,000,604...141,099,268
Ensembl chr 5:141,050,842...141,099,268 		JBrowse link
G Phc3 polyhomeotic homolog 3 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 2:112,408,709...112,483,719
Ensembl chr 2:112,408,531...112,476,540 		JBrowse link
G Phf1 PHD finger protein 1 ISO RGD PMID:23473600 PMID:23642229 PMID:24035451 PMID:24148750 RGD:9479058, RGD:9479074, RGD:9479148, RGD:9479059 NCBI chr20:5,017,765...5,022,872
Ensembl chr20:5,017,893...5,022,871 		JBrowse link
G Phf19 PHD finger protein 19 ISO RGD PMID:23473600 PMID:23642229 PMID:24035451 PMID:24148750 RGD:9479058, RGD:9479074, RGD:9479148, RGD:9479059 NCBI chr 3:18,175,281...18,197,289
Ensembl chr 3:18,175,282...18,196,405 		JBrowse link
G Phf2 PHD finger protein 2 ISO RGD PMID:23200123 RGD:7242632 NCBI chr17:15,783,221...15,851,209
Ensembl chr17:15,781,864...15,851,208 		JBrowse link
G Phf8 PHD finger protein 8 ISO RGD PMID:23200123 RGD:7242632 NCBI chr  X:20,524,103...20,623,459
Ensembl chr  X:20,524,558...20,623,410 		JBrowse link
G Prdm16 PR/SET domain 16 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 5:164,879,864...165,203,986
Ensembl chr 5:164,880,587...165,203,601 		JBrowse link
G Prdm2 PR/SET domain 2 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 5:155,421,066...155,531,884
Ensembl chr 5:155,422,134...155,531,825 		JBrowse link
G Prdm6 PR/SET domain 6 ISO RGD PMID:23200123 RGD:7242632 NCBI chr18:46,904,115...47,008,482
Ensembl chr18:46,904,127...47,007,823 		JBrowse link
G Prdm8 PR/SET domain 8 ISO RGD PMID:23200123 RGD:7242632 NCBI chr14:11,403,202...11,424,059
Ensembl chr14:11,404,407...11,410,993 		JBrowse link
G Prdm9 PR/SET domain 9 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 ISO RGD PMID:24583552 RGD:9479047 NCBI chr 1:95,458,853...95,468,176
Ensembl chr 1:95,458,850...95,468,345 		JBrowse link
G Prmt2 protein arginine methyltransferase 2 ISO RGD PMID:24583552 RGD:9479047 NCBI chr20:12,394,748...12,420,643
Ensembl chr20:12,394,798...12,420,643 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 ISO RGD PMID:24583552 RGD:9479047 NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 ISO RGD PMID:24583552 RGD:9479047 NCBI chr 2:197,927,750...197,932,760
Ensembl chr 2:197,927,220...197,933,648 		JBrowse link
G Prmt7 protein arginine methyltransferase 7 ISO RGD PMID:24583552 RGD:9479047 NCBI chr19:34,110,724...34,161,531
Ensembl chr19:34,110,747...34,162,577 		JBrowse link
G Rag2 recombination activating 2 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066 		JBrowse link
G Rbbp4 RB binding protein 4, chromatin remodeling factor ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr 5:141,655,863...141,675,157
Ensembl chr 5:141,638,421...141,675,284 		JBrowse link
G Rbbp5 RB binding protein 5, histone lysine methyltransferase complex subunit ISO RGD PMID:22663077 RGD:9479053 NCBI chr13:43,912,254...43,939,107
Ensembl chr13:43,912,254...43,939,107 		JBrowse link
G Rbbp7 RB binding protein 7, chromatin remodeling factor ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr  X:31,913,080...31,931,245
Ensembl chr  X:31,913,081...31,931,226 		JBrowse link
G Ring1 ring finger protein 1 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr20:4,830,120...4,833,623
Ensembl chr20:4,830,053...4,833,620 		JBrowse link
G Rnf2 ring finger protein 2 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr13:63,553,964...63,584,047
Ensembl chr13:63,554,862...63,583,099 		JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase ISO RGD PMID:22663077 PMID:23200123 RGD:7242632 RGD:9479053 NCBI chr 1:182,386,197...182,411,695
Ensembl chr 1:182,388,060...182,411,090 		JBrowse link
G Setd1b SET domain containing 1B, histone lysine methyltransferase ISO RGD PMID:22663077 PMID:23200123 RGD:7242632 RGD:9479053 NCBI chr12:33,395,963...33,421,671
Ensembl chr12:33,396,120...33,426,934 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chr 2:135,562,683...135,605,468
Ensembl chr 2:135,562,683...135,605,468 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 2:182,898,738...182,930,283
Ensembl chr 2:182,898,738...182,930,506 		JBrowse link
G Sgf29 SAGA complex associated factor 29 ISO RGD PMID:24035451 PMID:23642229 RGD:9479148, RGD:9479074 NCBI chr 1:181,238,458...181,271,931
Ensembl chr 1:181,238,468...181,274,781 		JBrowse link
G Sirt1 sirtuin 1 ISO RGD PMID:21151613 RGD:9104959 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Sirt2 sirtuin 2 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975 		JBrowse link
G Sirt3 sirtuin 3 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 1:195,942,066...195,964,472
Ensembl chr 1:195,942,073...195,964,808 		JBrowse link
G Sirt4 sirtuin 4 ISO RGD PMID:21151613 RGD:9104959 NCBI chr12:41,125,533...41,139,440
Ensembl chr12:41,131,262...41,139,439 		JBrowse link
G Sirt5 sirtuin 5 ISO RGD PMID:21151613 RGD:9104959 NCBI chr17:21,310,028...21,337,137
Ensembl chr17:21,310,028...21,337,101 		JBrowse link
G Sirt6 sirtuin 6 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Sirt7 sirtuin 7 ISO RGD PMID:21151613 RGD:9104959 NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172 		JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 ISO RGD PMID:24686119 RGD:9479075 NCBI chr 1:224,191,125...224,358,640
Ensembl chr 1:224,191,125...224,358,684 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO RGD PMID:24686119 RGD:9479075 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Smyd1 SET and MYND domain containing 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 4:103,195,330...103,252,989
Ensembl chr 4:103,200,322...103,311,766 		JBrowse link
G Smyd2 SET and MYND domain containing 2 ISO RGD PMID:23200123 RGD:7242632 NCBI chr13:101,425,270...101,466,576
Ensembl chr13:101,425,273...101,466,576 		JBrowse link
G Smyd3 SET and MYND domain containing 3 ISO RGD PMID:23200123 RGD:7242632 NCBI chr13:90,709,263...91,266,209
Ensembl chr13:90,709,270...91,266,253 		JBrowse link
G Spin1 spindlin 1 ISO RGD PMID:24035451 RGD:9479148 NCBI chr17:14,055,685...14,105,366
Ensembl chr17:14,055,689...14,105,411 		JBrowse link
G Ssrp1 structure specific recognition protein 1 ISO RGD PMID:23288364 RGD:9068945 NCBI chr 3:70,124,371...70,134,481
Ensembl chr 3:70,118,655...70,134,482 		JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit ISO RGD PMID:23288364 RGD:9068945 NCBI chr15:24,867,697...24,904,818
Ensembl chr15:24,866,489...24,904,846 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chr  X:14,421,028...14,433,993
Ensembl chr  X:14,421,109...14,433,982 		JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chr  X:141,792,589...141,795,257 JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO RGD PMID:23642229 PMID:24686119 RGD:9479074, RGD:9479075 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543 		JBrowse link
G Tdrd3 tudor domain containing 3 ISO RGD PMID:24035451 PMID:23211769 RGD:9479148, RGD:9479163 NCBI chr15:63,340,531...63,497,208
Ensembl chr15:63,341,235...63,476,110 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO RGD PMID:24035451 PMID:23642229 RGD:9479148, RGD:9479074 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Trim24 tripartite motif-containing 24 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 4:66,567,342...66,692,029
Ensembl chr 4:66,566,686...66,717,241 		JBrowse link
G Trim33 tripartite motif-containing 33 ISO RGD PMID:23642229 PMID:24686119 RGD:9479074, RGD:9479075 NCBI chr 2:190,812,329...190,892,663
Ensembl chr 2:190,807,243...190,888,814 		JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 ISO RGD PMID:24035451 PMID:23642229 RGD:9479148, RGD:9479074 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631 		JBrowse link
G Usp12 ubiquitin specific peptidase 12 ISO RGD PMID:24647359 RGD:9479061 NCBI chr12:8,309,845...8,363,686
Ensembl chr12:8,309,750...8,363,656 		JBrowse link
G Usp16 ubiquitin specific peptidase 16 ISO RGD PMID:24647359 RGD:9479061 NCBI chr11:26,681,359...26,711,313
Ensembl chr11:26,681,414...26,710,539 		JBrowse link
G Usp21 ubiquitin specific peptidase 21 ISO RGD PMID:24647359 RGD:9479061 NCBI chr13:83,702,672...83,709,215
Ensembl chr13:83,702,631...83,708,717 		JBrowse link
G Usp22 ubiquitin specific peptidase 22 ISO RGD PMID:24647359 RGD:9479061 NCBI chr10:45,828,619...45,855,468
Ensembl chr10:45,828,622...45,855,497 		JBrowse link
G Usp3 ubiquitin specific peptidase 3 ISO RGD PMID:24647359 RGD:9479061 NCBI chr 8:67,078,249...67,154,109
Ensembl chr 8:67,079,927...67,154,111 		JBrowse link
G Usp44 ubiquitin specific peptidase 44 ISO RGD PMID:24647359 RGD:9479061 NCBI chr 7:28,364,169...28,412,039
Ensembl chr 7:28,364,033...28,410,053 		JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked ISO RGD PMID:22663077 PMID:23200123 RGD:9479053, RGD:7242632 NCBI chr  Y:942,838...1,105,313
Ensembl chr  Y:924,168...1,103,422 		JBrowse link
G Wdr5 WD repeat domain 5 ISO RGD PMID:22663077 PMID:23642229 RGD:9479053, RGD:9479074 NCBI chr 3:10,836,964...10,856,682
Ensembl chr 3:10,837,025...10,856,671 		JBrowse link
G Wdr82 WD repeat domain 82 ISO RGD PMID:22663077 RGD:9479053 NCBI chr 8:106,814,569...106,834,535
Ensembl chr 8:106,814,569...106,834,438 		JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta ISO RGD PMID:23642229 RGD:9479074 NCBI chr 7:67,941,353...67,963,651
Ensembl chr 7:67,940,017...67,963,668 		JBrowse link
homocysteine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase TAS
ISO		 RGD PMID:11741948 PMID:20814827 RGD:730275, RGD:7242426 NCBI chr 3:143,569,134...143,584,359
Ensembl chr 3:143,569,094...143,584,393 		JBrowse link
G As3mt arsenite methyltransferase TAS RGD PMID:11790780 RGD:625365 NCBI chr 1:245,595,939...245,628,921
Ensembl chr 1:245,596,108...245,627,872 		JBrowse link
G Asmt acetylserotonin O-methyltransferase NAS RGD PMID:12198599 RGD:1359073 NCBI chr12:16,304,719...16,309,568
Ensembl chr12:16,304,719...16,309,568 		JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 ISO RGD PMID:15866169 RGD:1359044 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689 		JBrowse link
G Comt catechol-O-methyltransferase TAS RGD PMID:12584150 RGD:1359089 NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Dnmt1 DNA methyltransferase 1 TAS RGD PMID:12473678 RGD:1359078 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659 		JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase ISO RGD PMID:12628190 RGD:1359080 NCBI chr 7:8,918,764...8,959,474
Ensembl chr 7:8,917,786...8,956,475 		JBrowse link
G Gamt guanidinoacetate N-methyltransferase IDA RGD PMID:15533043 RGD:1359081 NCBI chr 7:9,448,590...9,451,413
Ensembl chr 7:9,448,628...9,451,778 		JBrowse link
G Gnmt glycine N-methyltransferase IDA RGD PMID:15347642 RGD:1359070 NCBI chr 9:14,254,675...14,258,028
Ensembl chr 9:14,254,675...14,258,434 		JBrowse link
G Hnmt histamine N-methyltransferase ISS RGD PMID:11566133 RGD:1359041 NCBI chr 3:6,591,804...6,623,821
Ensembl chr 3:6,591,463...6,624,012 		JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase ISS RGD PMID:15625008 RGD:1359083 NCBI chr 5:162,804,368...162,811,129
Ensembl chr 5:162,804,368...162,811,128 		JBrowse link
G Mrm2 mitochondrial rRNA methyltransferase 2 ISO RGD PMID:11827451 RGD:1359074 NCBI chr12:14,309,556...14,314,759
Ensembl chr12:14,251,941...14,314,118 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Nnmt nicotinamide N-methyltransferase ISO RGD PMID:15922112 RGD:1359084 NCBI chr 8:48,928,663...48,947,734
Ensembl chr 8:48,933,598...48,946,655 		JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IDA RGD PMID:8263531 RGD:729481 NCBI chr 1:2,111,756...2,160,354
Ensembl chr 1:2,111,763...2,159,201 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase IDA RGD PMID:8344945 RGD:729486 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
G Pnmt phenylethanolamine-N-methyltransferase TAS RGD PMID:12438084 RGD:1359087 NCBI chr10:83,383,019...83,386,557
Ensembl chr10:83,384,923...83,386,556 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 ISS RGD PMID:15866169 RGD:1359044 NCBI chr 1:95,458,853...95,468,176
Ensembl chr 1:95,458,850...95,468,345 		JBrowse link
G Prmt3 protein arginine methyltransferase 3 ISS RGD PMID:15866169 RGD:1359044 NCBI chr 1:99,492,712...99,581,774
Ensembl chr 1:99,492,724...99,579,435 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 ISO RGD PMID:15866169 RGD:1359044 NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 ISO RGD PMID:15866169 RGD:1359044 NCBI chr 2:197,927,750...197,932,760
Ensembl chr 2:197,927,220...197,933,648 		JBrowse link
G Rnmt RNA (guanine-7-) methyltransferase ISO RGD PMID:11472630 RGD:1359071 NCBI chr18:61,886,230...61,909,775
Ensembl chr18:61,886,292...61,909,775 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ISO RGD PMID:11959841 RGD:1359072 NCBI chr 2:182,898,738...182,930,283
Ensembl chr 2:182,898,738...182,930,506 		JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase ISO RGD PMID:11094092 RGD:1359810 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332 		JBrowse link
G Trdmt1 tRNA aspartic acid methyltransferase 1 ISO RGD PMID:12794065 RGD:1359088 NCBI chr17:76,601,966...76,646,104
Ensembl chr17:76,610,543...76,645,439 		JBrowse link
methionine cycle/metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase TAS
ISO
IMP		 SMPDB
RGD		 PMID:11741948 PMID:2292587 PMID:23073625 SMP:00033, RGD:730275, RGD:7242932, RGD:7242425 NCBI chr 3:143,569,134...143,584,359
Ensembl chr 3:143,569,094...143,584,393 		JBrowse link
G Amd1 adenosylmethionine decarboxylase 1 ISO
IMP		 SMPDB
RGD		 PMID:23073625 PMID:2292587 SMP:00033, RGD:7242425, RGD:7242932 NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476 		JBrowse link
G As3mt arsenite methyltransferase TAS RGD PMID:11790780 RGD:625365 NCBI chr 1:245,595,939...245,628,921
Ensembl chr 1:245,596,108...245,627,872 		JBrowse link
G Asmt acetylserotonin O-methyltransferase IDA RGD PMID:12198599 RGD:1359073 NCBI chr12:16,304,719...16,309,568
Ensembl chr12:16,304,719...16,309,568 		JBrowse link
G Bhmt betaine-homocysteine S-methyltransferase IDA
ISO		 SMPDB
RGD		 PMID:15845641 PMID:23073625 SMP:00033, RGD:1359026, RGD:7242425 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742 		JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 ISO RGD PMID:15866169 PMID:21074527 RGD:1359044, RGD:7242552 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689 		JBrowse link
G Cbs cystathionine beta synthase ISO SMPDB SMP:00033 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Chdh choline dehydrogenase ISO SMPDB SMP:00033 NCBI chr16:5,194,269...5,225,541
Ensembl chr16:5,194,269...5,225,537 		JBrowse link
G Comt catechol-O-methyltransferase TAS RGD PMID:12584150 RGD:1359089 NCBI chr11:82,568,052...82,587,642
Ensembl chr11:82,568,025...82,587,642 		JBrowse link
G Cth cystathionine gamma-lyase ISO SMPDB SMP:00033 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234 		JBrowse link
G Dnmt1 DNA methyltransferase 1 TAS
ISO		 SMPDB
RGD		 PMID:12473678 PMID:22342103 SMP:00033, RGD:1359078, RGD:7242551 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:22342103 RGD:7242551 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:22342103 RGD:7242551 NCBI chr 3:142,130,588...142,169,128
Ensembl chr 3:142,130,592...142,169,124 		JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase ISO RGD PMID:12628190 PMID:22194015 RGD:1359080, RGD:7242554 NCBI chr 7:8,918,764...8,959,474
Ensembl chr 7:8,917,786...8,956,475 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO RGD PMID:22194015 RGD:7242554 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362 		JBrowse link
G Gamt guanidinoacetate N-methyltransferase IDA RGD PMID:15533043 RGD:1359081 NCBI chr 7:9,448,590...9,451,413
Ensembl chr 7:9,448,628...9,451,778 		JBrowse link
G Gnmt glycine N-methyltransferase IDA
ISO		 RGD PMID:15347642 PMID:22342103 PMID:23073625 RGD:1359070, RGD:7242551, RGD:7242425 NCBI chr 9:14,254,675...14,258,028
Ensembl chr 9:14,254,675...14,258,434 		JBrowse link
G Hnmt histamine N-methyltransferase ISS RGD PMID:11566133 RGD:1359041 NCBI chr 3:6,591,804...6,623,821
Ensembl chr 3:6,591,463...6,624,012 		JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase ISS RGD PMID:15625008 RGD:1359083 NCBI chr 5:162,804,368...162,811,129
Ensembl chr 5:162,804,368...162,811,128 		JBrowse link
G Il4i1 interleukin 4 induced 1 ISO SMPDB SMP:00033 NCBI chr 1:95,299,457...95,324,564
Ensembl chr 1:95,295,601...95,324,562 		JBrowse link
G Kmt5a lysine methyltransferase 5A ISO RGD PMID:22194015 RGD:7242554 NCBI chr12:32,139,353...32,167,777
Ensembl chr12:32,139,178...32,162,711 		JBrowse link
G Mars1 methionyl-tRNA synthetase 1 ISO SMPDB SMP:00033 NCBI chr 7:63,121,142...63,138,550
Ensembl chr 7:63,121,142...63,138,495 		JBrowse link
G Mat1a methionine adenosyltransferase 1A IDA
IMP
ISO		 RGD PMID:9202427 PMID:2292587 PMID:23073625 RGD:1359039, RGD:7242932, RGD:7242425 NCBI chr16:16,983,084...17,001,284
Ensembl chr16:16,983,022...17,001,274 		JBrowse link
G Mat2a methionine adenosyltransferase 2A TAS
ISO		 SMPDB
RGD		 PMID:11099469 PMID:23073625 SMP:00033, RGD:1359040, RGD:7242425 NCBI chr 4:104,489,877...104,495,447
Ensembl chr 4:104,488,466...104,495,493 		JBrowse link
G Mat2b methionine adenosyltransferase 2 non-catalytic beta subunit ISO SMPDB
RGD		 PMID:23073625 SMP:00033, RGD:7242425 NCBI chr10:25,106,928...25,122,982
Ensembl chr10:25,106,930...25,122,777 		JBrowse link
G Mrm2 mitochondrial rRNA methyltransferase 2 ISO RGD PMID:11827451 RGD:1359074 NCBI chr12:14,309,556...14,314,759
Ensembl chr12:14,251,941...14,314,118 		JBrowse link
G Msrb2 methionine sulfoxide reductase B2 ISO SMPDB SMP:00033 NCBI chr17:81,974,378...82,000,044
Ensembl chr17:81,974,196...82,000,043 		JBrowse link
G Msrb3 methionine sulfoxide reductase B3 ISO SMPDB SMP:00033 NCBI chr 7:56,260,985...56,426,004
Ensembl chr 7:56,303,308...56,425,496 		JBrowse link
G Mtap methylthioadenosine phosphorylase ISO
IMP		 SMPDB
RGD		 PMID:23073625 PMID:2292587 SMP:00033, RGD:7242425, RGD:7242932 NCBI chr 5:103,874,460...103,920,684
Ensembl chr 5:103,873,020...103,939,406 		JBrowse link
G Mtfmt mitochondrial methionyl-tRNA formyltransferase ISO SMPDB SMP:00033 NCBI chr 8:65,953,787...65,971,841
Ensembl chr 8:65,953,767...65,971,841 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO SMPDB
RGD		 PMID:11933257 SMP:00033, RGD:1535021 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IDA
ISO		 SMPDB
RGD		 PMID:15845641 PMID:20814827 PMID:23073625 SMP:00033, RGD:1359026, RGD:7242426, RGD:7242425 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:15979034 PMID:20814827 RGD:1359037, RGD:7242426 NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425 		JBrowse link
G Nnmt nicotinamide N-methyltransferase ISO RGD PMID:15922112 RGD:1359084 NCBI chr 8:48,928,663...48,947,734
Ensembl chr 8:48,933,598...48,946,655 		JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IDA RGD PMID:8263531 RGD:729481 NCBI chr 1:2,111,756...2,160,354
Ensembl chr 1:2,111,763...2,159,201 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase IDA RGD PMID:8344945 RGD:729486 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
G Pnmt phenylethanolamine-N-methyltransferase TAS RGD PMID:12438084 RGD:1359087 NCBI chr10:83,383,019...83,386,557
Ensembl chr10:83,384,923...83,386,556 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 ISS
ISO		 RGD PMID:15866169 PMID:21074527 RGD:1359044, RGD:7242552 NCBI chr 1:95,458,853...95,468,176
Ensembl chr 1:95,458,850...95,468,345 		JBrowse link
G Prmt2 protein arginine methyltransferase 2 ISO RGD PMID:21074527 RGD:7242552 NCBI chr20:12,394,748...12,420,643
Ensembl chr20:12,394,798...12,420,643 		JBrowse link
G Prmt3 protein arginine methyltransferase 3 ISS
ISO		 RGD PMID:15866169 PMID:21074527 RGD:1359044, RGD:7242552 NCBI chr 1:99,492,712...99,581,774
Ensembl chr 1:99,492,724...99,579,435 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 ISO RGD PMID:15866169 PMID:21074527 RGD:1359044, RGD:7242552 NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 ISO RGD PMID:15866169 PMID:21074527 RGD:1359044, RGD:7242552 NCBI chr 2:197,927,750...197,932,760
Ensembl chr 2:197,927,220...197,933,648 		JBrowse link
G Prmt7 protein arginine methyltransferase 7 ISO RGD PMID:21074527 RGD:7242552 NCBI chr19:34,110,724...34,161,531
Ensembl chr19:34,110,747...34,162,577 		JBrowse link
G Rnmt RNA (guanine-7-) methyltransferase ISO RGD PMID:11472630 RGD:1359071 NCBI chr18:61,886,230...61,909,775
Ensembl chr18:61,886,292...61,909,775 		JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase ISO RGD PMID:22194015 RGD:7242554 NCBI chr 2:135,562,683...135,605,468
Ensembl chr 2:135,562,683...135,605,468 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ISO RGD PMID:11959841 RGD:1359072 NCBI chr 2:182,898,738...182,930,283
Ensembl chr 2:182,898,738...182,930,506 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 ISO SMPDB SMP:00033 NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820 		JBrowse link
G Sms spermine synthase ISO RGD PMID:23073625 RGD:7242425 NCBI chr  X:37,516,949...37,572,657
Ensembl chr  X:37,516,931...37,570,822 		JBrowse link
G Smyd2 SET and MYND domain containing 2 ISO RGD PMID:22194015 RGD:7242554 NCBI chr13:101,425,270...101,466,576
Ensembl chr13:101,425,273...101,466,576 		JBrowse link
G Srm spermidine synthase ISO SMPDB
RGD		 PMID:23073625 SMP:00033, RGD:7242425 NCBI chr 5:159,025,875...159,029,076
Ensembl chr 5:159,025,873...159,029,405 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase ISO RGD PMID:22194015 RGD:7242554 NCBI chr  X:14,421,028...14,433,993
Ensembl chr  X:14,421,109...14,433,982 		JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 ISO RGD PMID:22194015 RGD:7242554 NCBI chr  X:141,792,589...141,795,257 JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase ISO RGD PMID:11094092 PMID:22194015 RGD:1359810, RGD:7242554 NCBI chr17:74,756,290...74,775,332
Ensembl chr17:74,756,306...74,775,332 		JBrowse link
G Trdmt1 tRNA aspartic acid methyltransferase 1 ISO RGD PMID:12794065 RGD:1359088 NCBI chr17:76,601,966...76,646,104
Ensembl chr17:76,610,543...76,645,439 		JBrowse link
polyamine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 IDA
ISO		 RGD PMID:10430362 PMID:13678416 RGD:1578320, RGD:7244193 NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476 		JBrowse link
G Azin1 antizyme inhibitor 1 ISO RGD PMID:21849468 RGD:7244195 NCBI chr 7:69,654,773...69,681,578
Ensembl chr 7:69,654,663...69,681,578 		JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 ISO RGD PMID:21849468 RGD:7244195 NCBI chr 7:8,883,855...8,886,315
Ensembl chr 7:8,883,851...8,886,310 		JBrowse link
G Oaz2 ornithine decarboxylase antizyme 2 ISO RGD PMID:21849468 RGD:7244195 NCBI chr 8:66,199,694...66,213,513
Ensembl chr 8:66,199,706...66,231,453 		JBrowse link
G Oaz3 ornithine decarboxylase antizyme 3 ISO RGD PMID:21849468 RGD:7244195 NCBI chr 2:182,073,212...182,076,147
Ensembl chr 2:182,073,215...182,082,399 		JBrowse link
G Odc1 ornithine decarboxylase 1 IDA
ISO		 RGD PMID:10430362 PMID:13678416 RGD:1578320, RGD:7244193 NCBI chr 6:40,329,831...40,336,444
Ensembl chr 6:40,329,964...40,336,440 		JBrowse link
G Paox polyamine oxidase IDA
ISO		 RGD PMID:15541750 PMID:13678416 RGD:7244190, RGD:7244193 NCBI chr 1:194,919,655...194,928,498
Ensembl chr 1:194,903,273...194,928,504 		JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 IDA
ISO
TAS		 RGD PMID:15541750 PMID:13678416 PMID:13678416 RGD:7244190, RGD:7244193, RGD:7244193 NCBI chr  X:40,158,354...40,161,641
Ensembl chr  X:40,157,046...40,196,813 		JBrowse link
G Smox spermine oxidase IDA
ISO		 RGD PMID:15541750 PMID:13678416 RGD:7244190, RGD:7244193 NCBI chr 3:118,731,814...118,767,242
Ensembl chr 3:118,731,900...118,765,710 		JBrowse link
G Sms spermine synthase ISO RGD PMID:13678416 RGD:7244193 NCBI chr  X:37,516,949...37,572,657
Ensembl chr  X:37,516,931...37,570,822 		JBrowse link
G Srm spermidine synthase ISO RGD PMID:13678416 RGD:7244193 NCBI chr 5:159,025,875...159,029,076
Ensembl chr 5:159,025,873...159,029,405 		JBrowse link
putrescine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 IDA RGD PMID:10430362 RGD:1578320 NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476 		JBrowse link
G Odc1 ornithine decarboxylase 1 IDA RGD PMID:10430362 RGD:1578320 NCBI chr 6:40,329,831...40,336,444
Ensembl chr 6:40,329,964...40,336,440 		JBrowse link
remethylation pathway of homocysteine metabolism - cobalamin dependent term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IDA
ISO		 RGD PMID:15845641 PMID:20814827 RGD:1359026, RGD:7242426 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:15979034 PMID:20814827 RGD:1359037, RGD:7242426 NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425 		JBrowse link
remethylation pathway of homocysteine metabolism - cobalamin independent, betaine dependent term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase ISO SMPDB SMP:00123 NCBI chr 3:143,569,134...143,584,359
Ensembl chr 3:143,569,094...143,584,393 		JBrowse link
G Aldh7a1 aldehyde dehydrogenase 7 family, member A1 ISO SMPDB SMP:00123 NCBI chr18:50,003,242...50,042,193
Ensembl chr18:50,009,934...50,042,193 		JBrowse link
G Bhmt betaine-homocysteine S-methyltransferase IDA
ISO		 SMPDB
RGD		 PMID:15845641 PMID:20346934 PMID:20814827 SMP:00123, RGD:1359026, RGD:7242428, RGD:7242426 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742 		JBrowse link
G Chdh choline dehydrogenase ISO SMPDB SMP:00123 NCBI chr16:5,194,269...5,225,541
Ensembl chr16:5,194,269...5,225,537 		JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO SMPDB SMP:00123 NCBI chr 4:104,489,877...104,495,447
Ensembl chr 4:104,488,466...104,495,493 		JBrowse link
G Mat2b methionine adenosyltransferase 2 non-catalytic beta subunit ISO SMPDB SMP:00123 NCBI chr10:25,106,928...25,122,982
Ensembl chr10:25,106,930...25,122,777 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO SMPDB SMP:00123 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase ISO SMPDB SMP:00123 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
spermidine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 IDA
IMP
ISO		 SMPDB
RGD		 PMID:10430362 PMID:10712236 PMID:1415709 SMP:00445, RGD:1578320, RGD:7242911, RGD:7242912 NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476 		JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO SMPDB SMP:00445 NCBI chr 4:104,489,877...104,495,447
Ensembl chr 4:104,488,466...104,495,493 		JBrowse link
G Mat2b methionine adenosyltransferase 2 non-catalytic beta subunit ISO SMPDB SMP:00445 NCBI chr10:25,106,928...25,122,982
Ensembl chr10:25,106,930...25,122,777 		JBrowse link
G Odc1 ornithine decarboxylase 1 IDA
ISO
IMP		 SMPDB
RGD		 PMID:10430362 PMID:2292587 PMID:1415709 SMP:00445, RGD:1578320, RGD:7242932, RGD:7242912 NCBI chr 6:40,329,831...40,336,444
Ensembl chr 6:40,329,964...40,336,440 		JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 IMP RGD PMID:2292587 RGD:7242932 NCBI chr  X:40,158,354...40,161,641
Ensembl chr  X:40,157,046...40,196,813 		JBrowse link
G Sms spermine synthase ISO SMPDB SMP:00445 NCBI chr  X:37,516,949...37,572,657
Ensembl chr  X:37,516,931...37,570,822 		JBrowse link
G Srm spermidine synthase ISO
IMP
IDA		 SMPDB
RGD		 PMID:23073625 PMID:2292587 PMID:16931179 SMP:00445, RGD:7242425, RGD:7242932, RGD:7242920 NCBI chr 5:159,025,875...159,029,076
Ensembl chr 5:159,025,873...159,029,405 		JBrowse link
spermine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 IDA
ISO
IMP		 SMPDB
RGD		 PMID:10430362 PMID:1415709 PMID:10712236 SMP:00445, RGD:1578320, RGD:7242912, RGD:7242911 NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476 		JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO SMPDB SMP:00445 NCBI chr 4:104,489,877...104,495,447
Ensembl chr 4:104,488,466...104,495,493 		JBrowse link
G Mat2b methionine adenosyltransferase 2 non-catalytic beta subunit ISO SMPDB SMP:00445 NCBI chr10:25,106,928...25,122,982
Ensembl chr10:25,106,930...25,122,777 		JBrowse link
G Odc1 ornithine decarboxylase 1 IDA
ISO
IMP		 SMPDB
RGD		 PMID:10430362 PMID:2292587 PMID:1415709 SMP:00445, RGD:1578320, RGD:7242932, RGD:7242912 NCBI chr 6:40,329,831...40,336,444
Ensembl chr 6:40,329,964...40,336,440 		JBrowse link
G Sat1 spermidine/spermine N1-acetyl transferase 1 IMP RGD PMID:2292587 RGD:7242932 NCBI chr  X:40,158,354...40,161,641
Ensembl chr  X:40,157,046...40,196,813 		JBrowse link
G Sms spermine synthase ISO
IMP		 SMPDB
RGD		 PMID:23073625 PMID:2292587 SMP:00445, RGD:7242425, RGD:7242932 NCBI chr  X:37,516,949...37,572,657
Ensembl chr  X:37,516,931...37,570,822 		JBrowse link
G Srm spermidine synthase ISO SMPDB SMP:00445 NCBI chr 5:159,025,875...159,029,076
Ensembl chr 5:159,025,873...159,029,405 		JBrowse link
transsulfuration pathway of homocysteine metabolism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase ISO SMPDB
RGD		 PMID:20162368 SMP:00455, RGD:7242427 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Cdo1 cysteine dioxygenase type 1 ISO RGD PMID:20162368 RGD:7242427 NCBI chr18:39,432,473...39,447,253
Ensembl chr18:39,432,474...39,447,296 		JBrowse link
G Csad cysteine sulfinic acid decarboxylase ISO RGD PMID:20162368 RGD:7242427 NCBI chr 7:133,308,571...133,337,914
Ensembl chr 7:133,308,574...133,337,615 		JBrowse link
G Cth cystathionine gamma-lyase ISO SMPDB
RGD		 PMID:20162368 SMP:00455, RGD:7242427 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6092
    regulatory pathway 3867
      homeostasis pathway 1773
        organic chemical homeostasis pathway 438
          S-adenosylmethionine homeostasis pathway 289
            DNA modification pathway + 28
            folate metabolic pathway + 42
            histone modification pathway + 184
            homocysteine metabolic pathway + 36
            methionine cycle/metabolic pathway + 54
            polyamine metabolic pathway + 13
            radical SAM enzyme mediated metabolic pathway + 0
paths to the root