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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:organic chemical homeostasis pathway
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Accession:PW:0001691 term browser browse the term
Definition:Those pathways involved in the proper balance of organic chemical levels, uptake and transport, utilization and storage, as demanded by the needs of cells tissues and organs. Disruption of organic chemical homeostasis can have harmful consequences. Collectively they represent a broad class of substances containing carbon.

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altered DNA modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mbd4 methyl-CpG binding domain 4, DNA glycosylase ISO in silico assessment of loss of DNA-protein interactions and observed enhancement of DNA repair capacity (DRC) in the context of nucleotide excision repair (NER) pathway for SNP RGD PMID:24004570 RGD:9588971 NCBI chrNW_004936602:968,159...980,452
Ensembl chrNW_004936602:956,784...967,884 		JBrowse link
altered folate cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:22353665 RGD:7242562 NCBI chrNW_004936898:456,299...484,681
Ensembl chrNW_004936898:456,521...484,282 		JBrowse link
G Dhfr dihydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936469:67,962...83,116 JBrowse link
G Folr1 folate receptor alpha ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936498:1,489,916...1,497,200
Ensembl chrNW_004936498:1,491,547...1,497,226 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936495:8,100,977...8,170,244
Ensembl chrNW_004936495:8,100,912...8,171,800 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936474:623,438...637,849
Ensembl chrNW_004936474:623,291...638,193 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936484:16,087,924...16,180,089
Ensembl chrNW_004936484:16,087,923...16,180,148 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936643:379,790...410,034
Ensembl chrNW_004936643:380,968...409,464 		JBrowse link
G Slc46a1 solute carrier family 46 member 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936538:4,549,032...4,642,870
Ensembl chrNW_004936538:4,549,599...4,555,415 		JBrowse link
altered folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22353665 RGD:7242562 NCBI chrNW_004936495:8,100,977...8,170,244
Ensembl chrNW_004936495:8,100,912...8,171,800 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:22353665 RGD:7242562 NCBI chrNW_004936474:623,438...637,849
Ensembl chrNW_004936474:623,291...638,193 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22353665 RGD:7242562 NCBI chrNW_004936484:16,087,924...16,180,089
Ensembl chrNW_004936484:16,087,923...16,180,148 		JBrowse link
altered retinoid cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936537:4,969,456...5,326,682
Ensembl chrNW_004936537:5,202,093...5,323,527 		JBrowse link
G Lrat lecithin retinol acyltransferase ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936576:1,491,480...1,498,568
Ensembl chrNW_004936576:1,492,297...1,501,917 		JBrowse link
G Rbp3 retinol binding protein 3 ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936554:7,329,155...7,340,434
Ensembl chrNW_004936554:7,329,028...7,338,074 		JBrowse link
G Rdh12 retinol dehydrogenase 12 ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936495:11,111,247...11,121,976
Ensembl chrNW_004936495:11,111,105...11,121,341 		JBrowse link
G Rlbp1 retinaldehyde binding protein 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936483:15,086,485...15,097,980
Ensembl chrNW_004936483:15,084,756...15,096,072 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936591:3,347,346...3,368,062
Ensembl chrNW_004936591:3,347,272...3,368,015 		JBrowse link
altered visual phototransduction pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936482:14,091,343...14,107,793
Ensembl chrNW_004936482:14,091,913...14,107,787 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936475:9,844,438...9,908,009 JBrowse link
G Guca1b guanylate cyclase activator 1B ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936476:17,679,505...17,688,970
Ensembl chrNW_004936476:17,679,500...17,691,037 		JBrowse link
G Pde6a phosphodiesterase 6A ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936504:5,018,171...5,088,333
Ensembl chrNW_004936504:5,018,064...5,092,024 		JBrowse link
G Pde6b phosphodiesterase 6B ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936477:22,418,037...22,472,251
Ensembl chrNW_004936477:22,417,453...22,472,185 		JBrowse link
G Pde6g phosphodiesterase 6G ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936594:5,263,345...5,267,240
Ensembl chrNW_004936594:5,263,333...5,267,476 		JBrowse link
G Rho rhodopsin ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936602:896,730...901,480
Ensembl chrNW_004936602:894,617...901,664 		JBrowse link
G Sag S-antigen visual arrestin ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004936525:3,932,118...3,965,651
Ensembl chrNW_004936525:3,931,933...3,964,834 		JBrowse link
DNA modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxxc1 CXXC finger protein 1 ISO RGD PMID:23697932 RGD:9479164 NCBI chrNW_004936497:12,842,569...12,847,952
Ensembl chrNW_004936497:12,842,564...12,847,997 		JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:22770212 PMID:24825349 RGD:8695943 RGD:8695944 NCBI chrNW_004936659:520,181...565,496
Ensembl chrNW_004936659:520,493...565,416 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:22770212 PMID:24825349 RGD:8695943 RGD:8695944 NCBI chrNW_004936493:6,963,406...7,013,256
Ensembl chrNW_004936493:6,935,386...7,007,610 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:22770212 PMID:24825349 RGD:8695943 RGD:8695944 NCBI chrNW_004936485:19,547,836...19,570,716 JBrowse link
G Ebf1 EBF transcription factor 1 ISO RGD PMID:24825349 RGD:8695944 NCBI chrNW_004936515:4,266,419...4,643,702 JBrowse link
G Kdm2a lysine demethylase 2A ISO RGD PMID:23697932 RGD:9479164 NCBI chrNW_004936599:2,466,427...2,576,623
Ensembl chrNW_004936599:2,466,214...2,576,623 		JBrowse link
G Kdm2b lysine demethylase 2B ISO RGD PMID:23697932 RGD:9479164 NCBI chrNW_004936558:2,771,420...2,897,694
Ensembl chrNW_004936558:2,771,420...2,897,292 		JBrowse link
G Kmt2a lysine methyltransferase 2A ISO RGD PMID:23697932 RGD:9479164 NCBI chrNW_004936542:3,480,071...3,566,823
Ensembl chrNW_004936542:3,391,774...3,562,147 		JBrowse link
G Kmt2c lysine methyltransferase 2C ISO RGD PMID:23697932 RGD:9479164 NCBI chrNW_004936527:7,310,885...7,508,032
Ensembl chrNW_004936527:7,312,721...7,506,365 		JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 ISO RGD PMID:23324617 RGD:8695954 NCBI chrNW_004936497:12,848,918...12,868,504
Ensembl chrNW_004936497:12,848,874...12,871,639 		JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chrNW_004936497:9,512,350...9,619,250
Ensembl chrNW_004936497:9,545,907...9,619,267 		JBrowse link
G Mbd4 methyl-CpG binding domain 4, DNA glycosylase ISO RGD PMID:23324617 RGD:8695954 NCBI chrNW_004936602:968,159...980,452
Ensembl chrNW_004936602:956,784...967,884 		JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chrNW_004936809:902,938...967,771
Ensembl chrNW_004936809:911,764...966,839 		JBrowse link
G Nanog Nanog homeobox ISO RGD PMID:24825349 RGD:8695944 NCBI chrNW_004936892:181,834...187,691 JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:24825349 RGD:8695944 NCBI chrNW_004936762:99,335...137,833
Ensembl chrNW_004936762:99,293...137,874 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO RGD PMID:24825349 RGD:8695944 NCBI chrNW_004936602:1,230,907...1,368,588
Ensembl chrNW_004936602:1,230,907...1,304,743 		JBrowse link
G Prdm14 PR/SET domain 14 ISO RGD PMID:24825349 RGD:8695944 NCBI chrNW_004936496:14,789,443...14,820,967
Ensembl chrNW_004936496:14,806,928...14,820,967 		JBrowse link
G Sin3a SIN3 transcription regulator family member A ISO RGD PMID:24825349 RGD:8695944 NCBI chrNW_004936471:34,206,084...34,260,538
Ensembl chrNW_004936471:34,204,524...34,260,564 		JBrowse link
G Spi1 Spi-1 proto-oncogene ISO RGD PMID:24825349 RGD:8695944 NCBI chrNW_004936562:1,852,759...1,870,647
Ensembl chrNW_004936562:1,852,740...1,870,472 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 ISO RGD PMID:22770212 PMID:24825349 RGD:8695943 RGD:8695944 NCBI chrNW_004936752:440,137...577,339
Ensembl chrNW_004936752:440,136...577,615 		JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 ISO RGD PMID:22770212 PMID:23697932 PMID:24825349 RGD:8695943 RGD:8695944 RGD:9479164 NCBI chrNW_004936556:292,551...391,644
Ensembl chrNW_004936556:292,586...385,741 		JBrowse link
G Uhrf1 ubiquitin like with PHD and ring finger domains 1 ISO RGD PMID:23324617 RGD:8695954 NCBI chrNW_004936588:2,863,651...2,890,116
Ensembl chrNW_004936588:2,862,367...2,888,946 		JBrowse link
G Uhrf2 ubiquitin like with PHD and ring finger domains 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chrNW_004936539:910,191...990,258
Ensembl chrNW_004936539:910,172...992,983 		JBrowse link
G Zbtb33 zinc finger and BTB domain containing 33 ISO RGD PMID:23324617 RGD:8695954 NCBI chrNW_004936479:9,781,923...9,791,000
Ensembl chrNW_004936479:9,781,952...9,790,821 		JBrowse link
G Zbtb38 zinc finger and BTB domain containing 38 ISO RGD PMID:23324617 RGD:8695954 NCBI chrNW_004936540:3,207,044...3,263,373
Ensembl chrNW_004936540:3,198,254...3,262,475 		JBrowse link
G Zbtb4 zinc finger and BTB domain containing 4 ISO RGD PMID:23324617 RGD:8695954 NCBI chrNW_004936595:736,873...753,386 JBrowse link
G Zfp57 ZFP57 zinc finger protein ISO RGD PMID:23324617 RGD:8695954 NCBI chrNW_004936723:1,063,969...1,069,986 JBrowse link
folate cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:22353665 RGD:7242562 NCBI chrNW_004936898:456,299...484,681
Ensembl chrNW_004936898:456,521...484,282 		JBrowse link
G Amt aminomethyltransferase ISO RGD PMID:20645850 RGD:7242560 NCBI chrNW_004936529:1,049,364...1,054,458 JBrowse link
G Dhfr dihydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936469:67,962...83,116 JBrowse link
G Dld dihydrolipoamide dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chrNW_004936479:16,247,230...16,271,597
Ensembl chrNW_004936479:16,243,829...16,271,616 		JBrowse link
G Dmgdh dimethylglycine dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chrNW_004936549:6,838,773...6,899,961
Ensembl chrNW_004936549:6,839,295...6,899,911 		JBrowse link
G Folr1 folate receptor alpha ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936498:1,489,916...1,497,200
Ensembl chrNW_004936498:1,491,547...1,497,226 		JBrowse link
G Folr2 folate receptor beta ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936498:1,516,719...1,522,187
Ensembl chrNW_004936498:1,516,710...1,522,347 		JBrowse link
G Fpgs folylpolyglutamate synthase ISO RGD PMID:16859665 RGD:7242559 NCBI chrNW_004936487:15,453,010...15,466,591
Ensembl chrNW_004936487:15,453,032...15,468,985 		JBrowse link
G Gcsh glycine cleavage system protein H ISO RGD PMID:20645850 RGD:7242560 NCBI chrNW_004936475:28,749,545...28,760,242
Ensembl chrNW_004936475:28,749,580...28,760,230 		JBrowse link
G Ggh gamma-glutamyl hydrolase ISO RGD PMID:16859665 RGD:7242559 NCBI chrNW_004936496:10,485,528...10,505,506
Ensembl chrNW_004936496:10,485,504...10,505,842 		JBrowse link
G Gldc glycine decarboxylase ISO RGD PMID:20645850 RGD:7242560 NCBI chrNW_004936539:1,008,340...1,095,044
Ensembl chrNW_004936539:1,007,820...1,095,054 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936495:8,100,977...8,170,244
Ensembl chrNW_004936495:8,100,912...8,171,800 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936489:3,877,423...4,060,129
Ensembl chrNW_004936489:3,876,680...4,051,933 		JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO RGD PMID:20645850 PMID:22108709 RGD:7242557 RGD:7242560 NCBI chrNW_004936556:462,998...475,092
Ensembl chrNW_004936556:462,974...475,159 		JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936598:1,401,392...1,514,314
Ensembl chrNW_004936598:1,401,402...1,514,357 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936474:623,438...637,849
Ensembl chrNW_004936474:623,291...638,193 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936484:16,087,924...16,180,089
Ensembl chrNW_004936484:16,087,923...16,180,148 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936643:379,790...410,034
Ensembl chrNW_004936643:380,968...409,464 		JBrowse link
G Sardh sarcosine dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chrNW_004936669:3,244,302...3,297,906
Ensembl chrNW_004936669:3,243,762...3,297,905 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chrNW_004936741:1,849,239...1,877,724
Ensembl chrNW_004936741:1,849,609...1,877,727 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 ISO RGD PMID:20645850 PMID:22108709 RGD:7242557 RGD:7242560 NCBI chrNW_004936646:1,422,844...1,427,929
Ensembl chrNW_004936646:1,422,817...1,429,037 		JBrowse link
G Slc19a1 solute carrier family 19 member 1 ISO RGD PMID:20814827 PMID:22108709 RGD:7242426 RGD:7242557 NCBI chrNW_004936778:823,376...846,843
Ensembl chrNW_004936778:829,550...848,833 		JBrowse link
G Slc25a32 solute carrier family 25 member 32 ISO RGD PMID:22332074 RGD:7242561 NCBI chrNW_004936470:40,357,066...40,370,514
Ensembl chrNW_004936470:40,357,446...40,370,514 		JBrowse link
G Slc46a1 solute carrier family 46 member 1 ISO RGD PMID:20814827 PMID:22108709 RGD:7242426 RGD:7242557 NCBI chrNW_004936538:4,549,032...4,642,870
Ensembl chrNW_004936538:4,549,599...4,555,415 		JBrowse link
folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:14729668 RGD:1547843 NCBI chrNW_004936898:456,299...484,681
Ensembl chrNW_004936898:456,521...484,282 		JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:9332377 PMID:22332074 RGD:70804 RGD:7242561 NCBI chrNW_004936586:1,782,581...1,809,458
Ensembl chrNW_004936586:1,782,528...1,810,010 		JBrowse link
G Dhfr dihydrofolate reductase ISO RGD PMID:11502523 PMID:22332074 RGD:1298877 RGD:7242561 NCBI chrNW_004936469:67,962...83,116 JBrowse link
G Dmgdh dimethylglycine dehydrogenase ISO RGD PMID:15358367 RGD:1547831 NCBI chrNW_004936549:6,838,773...6,899,961
Ensembl chrNW_004936549:6,839,295...6,899,911 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:12450384 PMID:22332074 RGD:1547842 RGD:7242561 NCBI chrNW_004936500:8,750,928...8,782,303
Ensembl chrNW_004936500:8,753,463...8,786,236 		JBrowse link
G Gnmt glycine N-methyltransferase ISO RGD PMID:8278367 RGD:1545057 NCBI chrNW_004936476:16,961,734...16,965,487
Ensembl chrNW_004936476:16,957,270...16,965,346 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:2186031 PMID:22332074 RGD:1299513 RGD:7242561 NCBI chrNW_004936495:8,100,977...8,170,244
Ensembl chrNW_004936495:8,100,912...8,171,800 		JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO RGD PMID:9454603 RGD:1540378 NCBI chrNW_004936556:462,998...475,092
Ensembl chrNW_004936556:462,974...475,159 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:11933257 PMID:22332074 RGD:1535021 RGD:7242561 NCBI chrNW_004936474:623,438...637,849
Ensembl chrNW_004936474:623,291...638,193 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:15845641 PMID:20814827 RGD:1359026 RGD:7242426 NCBI chrNW_004936484:16,087,924...16,180,089
Ensembl chrNW_004936484:16,087,923...16,180,148 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chrNW_004936643:379,790...410,034
Ensembl chrNW_004936643:380,968...409,464 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 ISO RGD PMID:3110140 PMID:15671219 PMID:22332074 RGD:1359815 RGD:2300383 RGD:7242561 NCBI chrNW_004936741:1,849,239...1,877,724
Ensembl chrNW_004936741:1,849,609...1,877,727 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 ISO RGD PMID:3110140 PMID:15671219 PMID:22332074 RGD:1359815 RGD:2300383 RGD:7242561 NCBI chrNW_004936646:1,422,844...1,427,929
Ensembl chrNW_004936646:1,422,817...1,429,037 		JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:9894005 PMID:22332074 RGD:1545055 RGD:7242561 NCBI chrNW_004936550:33,797...42,233
Ensembl chrNW_004936550:34,048...41,840 		JBrowse link
folate metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family member L1 ISO SMPDB
RGD		 PMID:14729668 RGD:1547843 SMP:00053 NCBI chrNW_004936898:456,299...484,681
Ensembl chrNW_004936898:456,521...484,282 		JBrowse link
G Dhfr dihydrofolate reductase ISO RGD
SMPDB		 PMID:11502523 RGD:1298877 SMP:00053 NCBI chrNW_004936469:67,962...83,116 JBrowse link
G Dmgdh dimethylglycine dehydrogenase ISO RGD PMID:15358367 RGD:1547831 NCBI chrNW_004936549:6,838,773...6,899,961
Ensembl chrNW_004936549:6,839,295...6,899,911 		JBrowse link
G Folr2 folate receptor beta ISO RGD PMID:8445646 RGD:1540379 NCBI chrNW_004936498:1,516,719...1,522,187
Ensembl chrNW_004936498:1,516,710...1,522,347 		JBrowse link
G Fpgs folylpolyglutamate synthase ISO SMPDB SMP:00053 NCBI chrNW_004936487:15,453,010...15,466,591
Ensembl chrNW_004936487:15,453,032...15,468,985 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase ISO SMPDB SMP:00053 NCBI chrNW_004936778:375,800...390,764
Ensembl chrNW_004936778:375,800...390,554 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:12450384 RGD:1547842 NCBI chrNW_004936500:8,750,928...8,782,303
Ensembl chrNW_004936500:8,753,463...8,786,236 		JBrowse link
G Ggh gamma-glutamyl hydrolase ISO SMPDB SMP:00053 NCBI chrNW_004936496:10,485,528...10,505,506
Ensembl chrNW_004936496:10,485,504...10,505,842 		JBrowse link
G Gnmt glycine N-methyltransferase ISO RGD PMID:15347642 RGD:1359070 NCBI chrNW_004936476:16,961,734...16,965,487
Ensembl chrNW_004936476:16,957,270...16,965,346 		JBrowse link
G Mtfmt mitochondrial methionyl-tRNA formyltransferase ISO SMPDB SMP:00053 NCBI chrNW_004936471:25,334,544...25,352,520
Ensembl chrNW_004936471:25,335,068...25,352,480 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO SMPDB
RGD		 PMID:2186031 RGD:1299513 SMP:00053 NCBI chrNW_004936495:8,100,977...8,170,244
Ensembl chrNW_004936495:8,100,912...8,171,800 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like ISO SMPDB SMP:00053 NCBI chrNW_004936489:3,877,423...4,060,129
Ensembl chrNW_004936489:3,876,680...4,051,933 		JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO SMPDB
RGD		 PMID:9454603 RGD:1540378 SMP:00053 NCBI chrNW_004936556:462,998...475,092
Ensembl chrNW_004936556:462,974...475,159 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO SMPDB
RGD		 PMID:11933257 RGD:1535021 SMP:00053 NCBI chrNW_004936474:623,438...637,849
Ensembl chrNW_004936474:623,291...638,193 		JBrowse link
G Mthfs methenyltetrahydrofolate synthetase ISO SMPDB SMP:00053 NCBI chrNW_004936471:37,910,856...37,964,655
Ensembl chrNW_004936471:37,902,554...37,964,812 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:15845641 RGD:1359026 NCBI chrNW_004936484:16,087,924...16,180,089
Ensembl chrNW_004936484:16,087,923...16,180,148 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:15979034 RGD:1359037 NCBI chrNW_004936643:379,790...410,034
Ensembl chrNW_004936643:380,968...409,464 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 ISO RGD PMID:15671219 RGD:1359815 NCBI chrNW_004936741:1,849,239...1,877,724
Ensembl chrNW_004936741:1,849,609...1,877,727 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 ISO RGD PMID:15671219 RGD:1359815 NCBI chrNW_004936646:1,422,844...1,427,929
Ensembl chrNW_004936646:1,422,817...1,429,037 		JBrowse link
G Slc19a1 solute carrier family 19 member 1 ISO RGD PMID:11600421 RGD:735239 NCBI chrNW_004936778:823,376...846,843
Ensembl chrNW_004936778:829,550...848,833 		JBrowse link
G Slc46a1 solute carrier family 46 member 1 ISO SMPDB SMP:00053 NCBI chrNW_004936538:4,549,032...4,642,870
Ensembl chrNW_004936538:4,549,599...4,555,415 		JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:9894005 RGD:1545055 NCBI chrNW_004936550:33,797...42,233
Ensembl chrNW_004936550:34,048...41,840 		JBrowse link
histone modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aebp2 AE binding protein 2 ISO RGD PMID:24148750 RGD:9479059 NCBI chrNW_004936548:6,828,190...6,890,287
Ensembl chrNW_004936548:6,810,002...6,889,614 		JBrowse link
G Aplf aprataxin and PNKP like factor ISO RGD PMID:23288364 RGD:9068945 NCBI chrNW_004936491:12,857,928...12,961,709
Ensembl chrNW_004936491:12,857,785...12,962,376 		JBrowse link
G Asf1a anti-silencing function 1A histone chaperone ISO RGD PMID:23288364 RGD:9068945 NCBI chrNW_004936658:1,699,150...1,713,079
Ensembl chrNW_004936658:1,699,044...1,715,582 		JBrowse link
G Asf1b anti-silencing function 1B histone chaperone ISO RGD PMID:23288364 RGD:9068945 NCBI chrNW_004936659:2,772,310...2,782,687
Ensembl chrNW_004936659:2,770,900...2,782,748 		JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936580:4,821,384...4,997,112
Ensembl chrNW_004936580:4,820,142...4,997,112 		JBrowse link
G Ash2l ASH2 like, histone lysine methyltransferase complex subunit ISO RGD PMID:22663077 RGD:9479053 NCBI chrNW_004936710:1,489,483...1,519,469
Ensembl chrNW_004936710:1,489,522...1,518,849 		JBrowse link
G Bap1 BRCA1 associated deubiquitinase 1 ISO RGD PMID:24647359 RGD:9479061 NCBI chrNW_004936473:3,239,009...3,247,806
Ensembl chrNW_004936473:3,239,010...3,247,806 		JBrowse link
G Birc5 baculoviral IAP repeat containing 5 ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936594:2,812,165...2,820,618
Ensembl chrNW_004936594:2,812,238...2,820,636 		JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936520:5,707,542...5,716,966
Ensembl chrNW_004936520:5,707,778...5,717,024 		JBrowse link
G Bptf bromodomain PHD finger transcription factor ISO RGD PMID:23642229 PMID:24686119 RGD:9479074 RGD:9479075 NCBI chrNW_004936541:5,261,899...5,396,930
Ensembl chrNW_004936541:5,262,773...5,395,519 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 ISO RGD PMID:24647359 RGD:9479061 NCBI chrNW_004936927:341,114...380,817
Ensembl chrNW_004936927:341,253...376,700 		JBrowse link
G Brd1 bromodomain containing 1 ISO RGD PMID:24686119 RGD:9479075 NCBI chrNW_004936629:909,716...958,620
Ensembl chrNW_004936629:909,680...958,896 		JBrowse link
G Brd2 bromodomain containing 2 ISO RGD PMID:24686119 RGD:9479075 NCBI chrNW_004936476:25,807,179...25,818,914
Ensembl chrNW_004936476:25,807,163...25,818,899 		JBrowse link
G Brd3 bromodomain containing 3 ISO RGD PMID:24686119 RGD:9479075 NCBI chrNW_004936669:2,993,284...3,023,185
Ensembl chrNW_004936669:2,993,187...3,021,200 		JBrowse link
G Brd4 bromodomain containing 4 ISO RGD PMID:24686119 RGD:9479075 NCBI chrNW_004936596:5,176,682...5,246,102
Ensembl chrNW_004936596:5,177,147...5,246,518 		JBrowse link
G Brd7 bromodomain containing 7 ISO RGD PMID:24686119 RGD:9479075 NCBI chrNW_004936475:3,394,423...3,432,998
Ensembl chrNW_004936475:3,393,373...3,433,103 		JBrowse link
G Brdt bromodomain testis associated ISO RGD PMID:24686119 RGD:9479075 NCBI chrNW_004936537:7,040,993...7,104,245 JBrowse link
G Brf1 BRF1 RNA polymerase III transcription initiation factor subunit ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936621:265,834...329,255
Ensembl chrNW_004936621:265,829...328,040 		JBrowse link
G Carm1 coactivator associated arginine methyltransferase 1 ISO RGD PMID:24583552 RGD:9479047 NCBI chrNW_004936659:1,071,883...1,120,917
Ensembl chrNW_004936659:1,090,164...1,123,920 		JBrowse link
G Cbx2 chromobox 2 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936594:3,886,926...3,902,459
Ensembl chrNW_004936594:3,893,772...3,900,000 		JBrowse link
G Cbx4 chromobox 4 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936594:3,943,933...3,950,124
Ensembl chrNW_004936594:3,943,924...3,950,196 		JBrowse link
G Cbx5 chromobox 5 ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936512:11,441,770...11,480,924
Ensembl chrNW_004936512:11,450,060...11,480,727 		JBrowse link
G Cbx6 chromobox 6 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936492:2,522,126...2,532,382
Ensembl chrNW_004936492:2,521,553...2,532,516 		JBrowse link
G Cbx7 chromobox 7 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936492:2,411,171...2,428,484
Ensembl chrNW_004936492:2,410,308...2,428,682 		JBrowse link
G Cbx8 chromobox 8 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936594:3,906,714...3,911,604
Ensembl chrNW_004936594:3,906,697...3,911,714 		JBrowse link
G Chaf1a chromatin assembly factor 1 subunit A ISO RGD PMID:23288364 RGD:9068945 NCBI chrNW_004936588:2,536,141...2,564,897
Ensembl chrNW_004936588:2,542,265...2,564,962 		JBrowse link
G Chaf1b chromatin assembly factor 1 subunit B ISO RGD PMID:23288364 RGD:9068945 NCBI chrNW_004936500:6,262,207...6,288,833
Ensembl chrNW_004936500:6,262,229...6,288,839 		JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936523:4,945,650...5,016,209
Ensembl chrNW_004936523:4,945,650...5,018,145 		JBrowse link
G Crebbp CREB binding protein ISO RGD PMID:21151613 PMID:24686119 RGD:9104959 RGD:9479075 NCBI chrNW_004936694:552,447...663,237
Ensembl chrNW_004936694:553,753...663,617 		JBrowse link
G Cxxc1 CXXC finger protein 1 ISO RGD PMID:22663077 RGD:9479053 NCBI chrNW_004936497:12,842,569...12,847,952
Ensembl chrNW_004936497:12,842,564...12,847,997 		JBrowse link
G Daxx death domain associated protein ISO RGD PMID:23288364 RGD:9068945 NCBI chrNW_004936476:25,546,091...25,550,390
Ensembl chrNW_004936476:25,546,036...25,550,392 		JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936588:1,288,447...1,332,489
Ensembl chrNW_004936588:1,288,392...1,330,297 		JBrowse link
G Dpf3 double PHD fingers 3 ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936488:1,976,323...2,235,906
Ensembl chrNW_004936488:1,986,321...2,235,825 		JBrowse link
G Dpy30 dpy-30 histone methyltransferase complex regulatory subunit ISO RGD PMID:22663077 RGD:9479053 NCBI chrNW_004936493:1,378,104...1,390,414
Ensembl chrNW_004936493:1,377,682...1,391,102 		JBrowse link
G Ehmt1 euchromatic histone lysine methyltransferase 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936669:321,580...450,061
Ensembl chrNW_004936669:321,249...423,018 		JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 ISO RGD PMID:23200123 PMID:23642229 RGD:7242632 RGD:9479074 NCBI chrNW_004936727:1,648,451...1,663,294
Ensembl chrNW_004936727:1,648,448...1,663,455 		JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939 		JBrowse link
G Hat1 histone acetyltransferase 1 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936509:2,105,866...2,153,089
Ensembl chrNW_004936509:2,105,845...2,153,198 		JBrowse link
G Hcfc1 host cell factor C1 ISO RGD PMID:22663077 RGD:9479053 NCBI chrNW_004936809:827,008...853,689
Ensembl chrNW_004936809:827,031...853,644 		JBrowse link
G Hdac1 histone deacetylase 1 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936474:15,320,635...15,351,418
Ensembl chrNW_004936474:15,320,729...15,350,860 		JBrowse link
G Hdac10 histone deacetylase 10 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936629:562,038...567,709
Ensembl chrNW_004936629:562,022...567,822 		JBrowse link
G Hdac11 histone deacetylase 11 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936898:148,891...177,471 JBrowse link
G Hdac2 histone deacetylase 2 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936679:2,448,676...2,474,641
Ensembl chrNW_004936679:2,448,390...2,474,641 		JBrowse link
G Hdac3 histone deacetylase 3 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936504:12,530,546...12,546,556
Ensembl chrNW_004936504:12,530,528...12,546,556 		JBrowse link
G Hdac4 histone deacetylase 4 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936745:1,730,743...1,942,071
Ensembl chrNW_004936745:1,730,694...1,942,074 		JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936541:561,721...598,915
Ensembl chrNW_004936541:558,414...599,195 		JBrowse link
G Hdac6 histone deacetylase 6 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936721:757,500...778,416
Ensembl chrNW_004936721:758,181...778,053 		JBrowse link
G Hdac7 histone deacetylase 7 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936512:5,680,564...5,701,182
Ensembl chrNW_004936512:5,682,490...5,697,869 		JBrowse link
G Hdac8 histone deacetylase 8 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936762:1,425,337...1,652,058
Ensembl chrNW_004936762:1,425,335...1,652,063 		JBrowse link
G Hdac9 histone deacetylase 9 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936546:4,398,003...5,247,649
Ensembl chrNW_004936546:4,781,304...5,246,939 		JBrowse link
G Hjurp Holliday junction recognition protein ISO RGD PMID:23288364 RGD:9068945 NCBI chrNW_004936525:3,528,379...3,544,088 JBrowse link
G Ing2 inhibitor of growth family member 2 ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936554:5,585,953...5,593,536
Ensembl chrNW_004936554:5,587,548...5,593,635 		JBrowse link
G Jmjd1c jumonji domain containing 1C ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936753:1,413,935...1,645,974
Ensembl chrNW_004936753:1,414,240...1,645,161 		JBrowse link
G Kat2a lysine acetyltransferase 2A ISO RGD PMID:21151613 PMID:23642229 RGD:9104959 RGD:9479074 NCBI chrNW_004936490:16,952,698...16,960,424
Ensembl chrNW_004936490:16,952,363...16,960,489 		JBrowse link
G Kat2b lysine acetyltransferase 2B ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936473:12,341,545...12,415,637
Ensembl chrNW_004936473:12,344,343...12,417,875 		JBrowse link
G Kat5 lysine acetyltransferase 5 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936599:3,767,526...3,775,416
Ensembl chrNW_004936599:3,766,242...3,776,128 		JBrowse link
G Kat6a lysine acetyltransferase 6A ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936785:602,754...704,504
Ensembl chrNW_004936785:603,478...701,791 		JBrowse link
G Kat6b lysine acetyltransferase 6B ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936521:4,309,699...4,497,755
Ensembl chrNW_004936521:4,309,694...4,496,904 		JBrowse link
G Kat7 lysine acetyltransferase 7 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936490:11,775,224...11,805,489
Ensembl chrNW_004936490:11,772,046...11,805,759 		JBrowse link
G Kat8 lysine acetyltransferase 8 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936501:13,475,676...13,487,617
Ensembl chrNW_004936501:13,474,735...13,489,341 		JBrowse link
G Kdm1a lysine demethylase 1A ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936474:8,262,913...8,319,089
Ensembl chrNW_004936474:8,262,885...8,319,092 		JBrowse link
G Kdm1b lysine demethylase 1B ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936552:3,921,217...3,964,281
Ensembl chrNW_004936552:3,921,490...3,962,648 		JBrowse link
G Kdm2a lysine demethylase 2A ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936599:2,466,427...2,576,623
Ensembl chrNW_004936599:2,466,214...2,576,623 		JBrowse link
G Kdm2b lysine demethylase 2B ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936558:2,771,420...2,897,694
Ensembl chrNW_004936558:2,771,420...2,897,292 		JBrowse link
G Kdm3a lysine demethylase 3A ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936712:1,053,210...1,097,845
Ensembl chrNW_004936712:1,053,210...1,096,961 		JBrowse link
G Kdm3b lysine demethylase 3B ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936531:7,517,810...7,600,319
Ensembl chrNW_004936531:7,516,125...7,600,347 		JBrowse link
G Kdm4a lysine demethylase 4A ISO RGD PMID:23200123 PMID:23642229 PMID:24035451 RGD:7242632 RGD:9479074 RGD:9479148 NCBI chrNW_004936474:25,002,527...25,056,642
Ensembl chrNW_004936474:25,002,509...25,056,642 		JBrowse link
G Kdm4b lysine demethylase 4B ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936588:2,908,970...3,005,625
Ensembl chrNW_004936588:2,908,899...3,005,674 		JBrowse link
G Kdm4c lysine demethylase 4C ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936539:1,198,105...1,580,078
Ensembl chrNW_004936539:1,198,147...1,580,082 		JBrowse link
G Kdm5a lysine demethylase 5A ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936606:486,424...570,546
Ensembl chrNW_004936606:485,655...570,739 		JBrowse link
G Kdm5b lysine demethylase 5B ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936567:1,782,056...1,860,861
Ensembl chrNW_004936567:1,781,995...1,863,461 		JBrowse link
G Kdm5c lysine demethylase 5C ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936751:159,628...204,136
Ensembl chrNW_004936751:167,920...203,966 		JBrowse link
G Kdm6a lysine demethylase 6A ISO RGD PMID:22663077 PMID:23200123 RGD:7242632 RGD:9479053 NCBI chrNW_004936502:10,980,303...11,196,711
Ensembl chrNW_004936502:10,980,118...11,196,163 		JBrowse link
G Kdm6b lysine demethylase 6B ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936595:1,077,318...1,099,082
Ensembl chrNW_004936595:1,089,544...1,097,595 		JBrowse link
G Kdm7a lysine demethylase 7A ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936592:4,250,658...4,305,838
Ensembl chrNW_004936592:4,257,113...4,298,903 		JBrowse link
G Kdm8 lysine demethylase 8 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936501:10,932,541...10,955,772
Ensembl chrNW_004936501:10,933,671...10,951,707 		JBrowse link
G Kmt2a lysine methyltransferase 2A ISO RGD PMID:22663077 PMID:23200123 RGD:7242632 RGD:9479053 NCBI chrNW_004936542:3,480,071...3,566,823
Ensembl chrNW_004936542:3,391,774...3,562,147 		JBrowse link
G Kmt2b lysine methyltransferase 2B ISO RGD PMID:22663077 PMID:23200123 RGD:7242632 RGD:9479053 NCBI chrNW_004936570:583,616...605,846
Ensembl chrNW_004936570:583,616...605,603 		JBrowse link
G Kmt2c lysine methyltransferase 2C ISO RGD PMID:22663077 PMID:23200123 RGD:7242632 RGD:9479053 NCBI chrNW_004936527:7,310,885...7,508,032
Ensembl chrNW_004936527:7,312,721...7,506,365 		JBrowse link
G Kmt2d lysine methyltransferase 2D ISO RGD PMID:22663077 PMID:23200123 RGD:7242632 RGD:9479053 NCBI chrNW_004936512:6,819,240...6,860,852
Ensembl chrNW_004936512:6,822,057...6,854,451 		JBrowse link
G Kmt2e lysine methyltransferase 2E (inactive) ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936479:18,674,657...18,764,177
Ensembl chrNW_004936479:18,675,413...18,738,983 		JBrowse link
G Kmt5a lysine methyltransferase 5A ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936558:1,346,040...1,366,601 JBrowse link
G Kmt5b lysine methyltransferase 5B ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936599:1,928,172...1,983,983
Ensembl chrNW_004936599:1,928,145...1,984,008 		JBrowse link
G Kmt5c lysine methyltransferase 5C ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936886:596,949...602,959
Ensembl chrNW_004936886:595,782...604,286 		JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936530:3,038,873...3,069,724
Ensembl chrNW_004936530:3,038,847...3,069,494 		JBrowse link
G Lbr lamin B receptor ISO RGD PMID:24035451 RGD:9479148 NCBI chrNW_004936526:2,254,463...2,282,785
Ensembl chrNW_004936526:2,254,449...2,282,785 		JBrowse link
G LOC101956559 core histone macro-H2A.2 ISO RGD PMID:24696452 RGD:9074213 NCBI chrNW_004936521:8,474,408...8,509,269
Ensembl chrNW_004936521:8,473,794...8,509,268 		JBrowse link
G LOC101957075 protein HIRA ISO RGD PMID:23288364 RGD:9068945 NCBI chrNW_004936619:3,282,170...3,380,151
Ensembl chrNW_004936619:3,282,173...3,380,151 		JBrowse link
G LOC101963041 histone H3.3A ISO RGD PMID:24614311 RGD:9075965 NCBI chrNW_004936526:2,835,002...2,842,328 JBrowse link
G LOC101963257 histone H3.3A ISO RGD PMID:24614311 RGD:9075965 NCBI chrNW_004936594:959,493...961,703
Ensembl chrNW_004936594:958,049...961,708 		JBrowse link
G LOC101966907 histone H2AX ISO RGD PMID:24614311 RGD:9075965 NCBI chrNW_004936542:4,046,930...4,049,017
Ensembl chrNW_004936542:4,047,915...4,048,346 		JBrowse link
G LOC101967900 lysine-specific demethylase 4D ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936674:53,200...73,042 JBrowse link
G LOC101971629 core histone macro-H2A.1 ISO RGD PMID:24696452 RGD:9074213 NCBI chrNW_004936597:2,496,489...2,556,352
Ensembl chrNW_004936597:2,495,862...2,556,603 		JBrowse link
G LOC101974663 histone H2A.Z ISO RGD PMID:24696452 RGD:9074213 NCBI chrNW_004936520:3,059,623...3,061,941 JBrowse link
G Mcph1 microcephalin 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936615:4,386,667...4,580,720
Ensembl chrNW_004936615:4,386,635...4,580,747 		JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936837:363,870...379,406
Ensembl chrNW_004936837:362,928...378,759 		JBrowse link
G Men1 menin 1 ISO RGD PMID:22663077 RGD:9479053 NCBI chrNW_004936599:4,504,489...4,510,085
Ensembl chrNW_004936599:4,504,397...4,510,555 		JBrowse link
G Mysm1 Myb like, SWIRM and MPN domains 1 ISO RGD PMID:24647359 RGD:9479061 NCBI chrNW_004936522:3,105,018...3,143,215
Ensembl chrNW_004936522:3,104,996...3,144,087 		JBrowse link
G Nap1l1 nucleosome assembly protein 1 like 1 ISO RGD PMID:23288364 RGD:9068945 NCBI chrNW_004936568:4,416,225...4,440,566
Ensembl chrNW_004936568:4,419,652...4,440,608 		JBrowse link
G Nasp nuclear autoantigenic sperm protein ISO RGD PMID:23288364 RGD:9068945 NCBI chrNW_004936474:26,710,364...26,743,336
Ensembl chrNW_004936474:26,710,229...26,743,254 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 ISO RGD PMID:22663077 RGD:9479053 NCBI chrNW_004936561:5,905,905...5,982,824
Ensembl chrNW_004936561:5,906,485...5,982,268 		JBrowse link
G Nsd1 nuclear receptor binding SET domain protein 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936597:1,426,318...1,577,193
Ensembl chrNW_004936597:1,425,974...1,572,715 		JBrowse link
G Nsd3 nuclear receptor binding SET domain protein 3 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936710:1,629,178...1,732,827
Ensembl chrNW_004936710:1,631,234...1,732,827 		JBrowse link
G Orc1 origin recognition complex subunit 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936522:8,580,661...8,610,750
Ensembl chrNW_004936522:8,586,591...8,610,747 		JBrowse link
G Pagr1 PAXIP1 associated glutamate rich protein 1 ISO RGD PMID:22663077 RGD:9479053 NCBI chrNW_004936501:12,657,092...12,660,106
Ensembl chrNW_004936501:12,656,435...12,660,067 		JBrowse link
G Paxip1 PAX interacting protein 1 ISO RGD PMID:22663077 RGD:9479053 NCBI chrNW_004936527:9,440,129...9,488,215
Ensembl chrNW_004936527:9,440,036...9,484,245 		JBrowse link
G Pbrm1 polybromo 1 ISO RGD PMID:24686119 RGD:9479075 NCBI chrNW_004936473:3,382,618...3,476,049
Ensembl chrNW_004936473:3,382,260...3,476,052 		JBrowse link
G Pcgf1 polycomb group ring finger 1 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936556:719,601...722,339
Ensembl chrNW_004936556:718,615...721,908 		JBrowse link
G Pcgf2 polycomb group ring finger 2 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936490:14,139,125...14,150,377
Ensembl chrNW_004936490:14,138,980...14,150,756 		JBrowse link
G Pcgf3 polycomb group ring finger 3 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936477:22,349,166...22,373,256
Ensembl chrNW_004936477:22,349,171...22,373,393 		JBrowse link
G Pcgf5 polycomb group ring finger 5 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936601:3,201,589...3,268,990
Ensembl chrNW_004936601:3,207,250...3,267,372 		JBrowse link
G Pcgf6 polycomb group ring finger 6 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936600:2,714,883...2,741,418
Ensembl chrNW_004936600:2,714,843...2,741,697 		JBrowse link
G Phc1 polyhomeotic homolog 1 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936870:275,764...300,460
Ensembl chrNW_004936870:277,252...303,125 		JBrowse link
G Phc2 polyhomeotic homolog 2 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936474:16,147,699...16,252,073
Ensembl chrNW_004936474:16,145,496...16,236,854 		JBrowse link
G Phc3 polyhomeotic homolog 3 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936593:2,263,892...2,336,856
Ensembl chrNW_004936593:2,263,829...2,336,856 		JBrowse link
G Phf1 PHD finger protein 1 ISO RGD PMID:23642229 PMID:24035451 RGD:9479074 RGD:9479148 NCBI chrNW_004936476:25,481,938...25,487,026
Ensembl chrNW_004936476:25,479,953...25,487,403 		JBrowse link
G Phf19 PHD finger protein 19 ISO RGD PMID:23642229 PMID:24035451 RGD:9479074 RGD:9479148 NCBI chrNW_004936487:9,310,327...9,326,650
Ensembl chrNW_004936487:9,310,790...9,326,681 		JBrowse link
G Phf2 PHD finger protein 2 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936487:2,912,114...2,956,429
Ensembl chrNW_004936487:2,912,112...2,954,525 		JBrowse link
G Phf8 PHD finger protein 8 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936751:850,630...935,382
Ensembl chrNW_004936751:850,237...934,586 		JBrowse link
G Prdm16 PR/SET domain 16 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936737:400,819...446,768
Ensembl chrNW_004936737:404,846...446,985 		JBrowse link
G Prdm2 PR/SET domain 2 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936474:1,910,026...1,924,900
Ensembl chrNW_004936474:1,862,898...1,949,500 		JBrowse link
G Prdm6 PR/SET domain 6 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936575:3,475,240...3,574,317
Ensembl chrNW_004936575:3,475,202...3,573,456 		JBrowse link
G Prdm8 PR/SET domain 8 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936749:1,819,491...1,827,440
Ensembl chrNW_004936749:1,820,235...1,823,714 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 ISO RGD PMID:24583552 RGD:9479047 NCBI chrNW_004936664:3,492,032...3,502,738
Ensembl chrNW_004936664:3,491,920...3,504,667 		JBrowse link
G Prmt2 protein arginine methyltransferase 2 ISO RGD PMID:24583552 RGD:9479047 NCBI chrNW_004936778:12,988...31,217
Ensembl chrNW_004936778:12,967...29,077 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 ISO RGD PMID:24583552 RGD:9479047 NCBI chrNW_004936722:1,379,515...1,388,538
Ensembl chrNW_004936722:1,379,515...1,388,546 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 ISO RGD PMID:24583552 RGD:9479047 NCBI chrNW_004936731:1,262,335...1,268,200
Ensembl chrNW_004936731:1,266,738...1,267,865 		JBrowse link
G Prmt7 protein arginine methyltransferase 7 ISO RGD PMID:24583552 RGD:9479047 NCBI chrNW_004936475:18,632,022...18,667,515
Ensembl chrNW_004936475:18,632,052...18,672,247 		JBrowse link
G Rag2 recombination activating 2 ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936533:1,801,207...1,807,431
Ensembl chrNW_004936533:1,801,391...1,807,431 		JBrowse link
G Rbbp5 RB binding protein 5, histone lysine methyltransferase complex subunit ISO RGD PMID:22663077 RGD:9479053 NCBI chrNW_004936557:7,260,342...7,291,721
Ensembl chrNW_004936557:7,260,290...7,291,721 		JBrowse link
G Ring1 ring finger protein 1 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936476:25,643,129...25,646,928
Ensembl chrNW_004936476:25,642,411...25,647,202 		JBrowse link
G Rnf2 ring finger protein 2 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058 RGD:9479060 NCBI chrNW_004936481:5,070,578...5,110,087
Ensembl chrNW_004936481:5,070,578...5,110,068 		JBrowse link
G Setd1a SET domain containing 1A, histone lysine methyltransferase ISO RGD PMID:22663077 PMID:23200123 RGD:7242632 RGD:9479053 NCBI chrNW_004936501:13,339,426...13,363,551
Ensembl chrNW_004936501:13,341,511...13,363,545 		JBrowse link
G Setd1b SET domain containing 1B, histone lysine methyltransferase ISO RGD PMID:22663077 PMID:23200123 RGD:7242632 RGD:9479053 NCBI chrNW_004936558:2,587,369...2,610,895
Ensembl chrNW_004936558:2,588,433...2,610,783 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936596:795,940...898,823
Ensembl chrNW_004936596:796,601...883,373 		JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936535:8,094,479...8,143,108
Ensembl chrNW_004936535:8,094,178...8,137,580 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936580:1,146,286...1,192,842
Ensembl chrNW_004936580:1,146,277...1,192,842 		JBrowse link
G Sgf29 SAGA complex associated factor 29 ISO RGD PMID:23642229 PMID:24035451 RGD:9479074 RGD:9479148 NCBI chrNW_004936501:12,008,601...12,024,113
Ensembl chrNW_004936501:12,008,425...12,028,239 		JBrowse link
G Sirt1 sirtuin 1 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215 		JBrowse link
G Sirt2 sirtuin 2 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936661:1,828,868...1,849,892
Ensembl chrNW_004936661:1,828,831...1,850,000 		JBrowse link
G Sirt3 sirtuin 3 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936888:63,131...78,536
Ensembl chrNW_004936888:63,546...77,950 		JBrowse link
G Sirt4 sirtuin 4 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936668:628,875...633,425
Ensembl chrNW_004936668:626,938...633,466 		JBrowse link
G Sirt5 sirtuin 5 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936552:192,182...214,037
Ensembl chrNW_004936552:192,226...214,030 		JBrowse link
G Sirt6 sirtuin 6 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096 		JBrowse link
G Sirt7 sirtuin 7 ISO RGD PMID:21151613 RGD:9104959 NCBI chrNW_004936594:5,418,331...5,425,050
Ensembl chrNW_004936594:5,418,796...5,424,988 		JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 ISO RGD PMID:24686119 RGD:9479075 NCBI chrNW_004936503:2,835,512...3,001,365
Ensembl chrNW_004936503:2,835,496...3,001,381 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO RGD PMID:24686119 RGD:9479075 NCBI chrNW_004936659:1,152,846...1,246,718
Ensembl chrNW_004936659:1,169,792...1,249,213 		JBrowse link
G Smyd1 SET and MYND domain containing 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936712:747,060...781,142
Ensembl chrNW_004936712:747,841...780,517 		JBrowse link
G Smyd2 SET and MYND domain containing 2 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936628:3,917,898...3,965,382
Ensembl chrNW_004936628:3,918,230...3,965,387 		JBrowse link
G Smyd3 SET and MYND domain containing 3 ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936526:4,536,157...5,218,883
Ensembl chrNW_004936526:4,536,142...5,218,657 		JBrowse link
G Spin1 spindlin 1 ISO RGD PMID:24035451 RGD:9479148 NCBI chrNW_004936854:448,403...516,251
Ensembl chrNW_004936854:448,296...516,355 		JBrowse link
G Ssrp1 structure specific recognition protein 1 ISO RGD PMID:23288364 RGD:9068945 NCBI chrNW_004936581:5,148,108...5,157,630
Ensembl chrNW_004936581:5,148,050...5,157,667 		JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit ISO RGD PMID:23288364 RGD:9068945 NCBI chrNW_004936880:511,699...545,364
Ensembl chrNW_004936880:508,244...545,369 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936721:646,778...661,144
Ensembl chrNW_004936721:646,772...661,091 		JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chrNW_004936613:1,443,663...1,467,776
Ensembl chrNW_004936613:1,443,629...1,467,229 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO RGD PMID:23642229 PMID:24686119 RGD:9479074 RGD:9479075 NCBI chrNW_004936762:189,710...271,759 JBrowse link
G Tdrd3 tudor domain containing 3 ISO RGD PMID:23211769 PMID:24035451 RGD:9479148 RGD:9479163 NCBI chrNW_004936511:11,258,898...11,348,522 JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO RGD PMID:23642229 PMID:24035451 RGD:9479074 RGD:9479148 NCBI chrNW_004936471:6,589,395...6,668,242
Ensembl chrNW_004936471:6,589,564...6,668,305 		JBrowse link
G Trim24 tripartite motif containing 24 ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936592:2,902,805...2,962,602
Ensembl chrNW_004936592:2,863,743...2,963,977 		JBrowse link
G Trim33 tripartite motif containing 33 ISO RGD PMID:23642229 PMID:24686119 RGD:9479074 RGD:9479075 NCBI chrNW_004936690:2,709,059...2,898,399
Ensembl chrNW_004936690:2,709,061...2,830,450 		JBrowse link
G Uhrf1 ubiquitin like with PHD and ring finger domains 1 ISO RGD PMID:23642229 PMID:24035451 RGD:9479074 RGD:9479148 NCBI chrNW_004936588:2,863,651...2,890,116
Ensembl chrNW_004936588:2,862,367...2,888,946 		JBrowse link
G Usp12 ubiquitin specific peptidase 12 ISO RGD PMID:24647359 RGD:9479061 NCBI chrNW_004936472:22,390,418...22,467,690
Ensembl chrNW_004936472:22,392,583...22,467,947 		JBrowse link
G Usp16 ubiquitin specific peptidase 16 ISO RGD PMID:24647359 RGD:9479061 NCBI chrNW_004936500:12,963,811...12,989,024
Ensembl chrNW_004936500:12,964,122...12,989,152 		JBrowse link
G Usp21 ubiquitin specific peptidase 21 ISO RGD PMID:24647359 RGD:9479061 NCBI chrNW_004936903:462,617...469,592
Ensembl chrNW_004936903:464,353...469,345 		JBrowse link
G Usp22 ubiquitin specific peptidase 22 ISO RGD PMID:24647359 RGD:9479061 NCBI chrNW_004936741:580,230...618,322
Ensembl chrNW_004936741:580,224...618,628 		JBrowse link
G Usp3 ubiquitin specific peptidase 3 ISO RGD PMID:24647359 RGD:9479061 NCBI chrNW_004936471:24,032,644...24,130,543
Ensembl chrNW_004936471:24,035,655...24,130,997 		JBrowse link
G Usp44 ubiquitin specific peptidase 44 ISO RGD PMID:24647359 RGD:9479061 NCBI chrNW_004936507:11,663,069...11,692,174
Ensembl chrNW_004936507:11,660,129...11,681,366 		JBrowse link
G Wdr5 WD repeat domain 5 ISO RGD PMID:22663077 PMID:23642229 RGD:9479053 RGD:9479074 NCBI chrNW_004936669:2,943,759...2,959,788
Ensembl chrNW_004936669:2,943,656...2,958,409 		JBrowse link
G Wdr82 WD repeat domain 82 ISO RGD PMID:22663077 RGD:9479053 NCBI chrNW_004936529:3,569,354...3,591,815
Ensembl chrNW_004936529:3,568,184...3,592,084 		JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta ISO RGD PMID:23642229 RGD:9479074 NCBI chrNW_004936470:42,444,671...42,470,548
Ensembl chrNW_004936470:42,445,412...42,470,900 		JBrowse link
homocysteine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase ISO RGD PMID:11741948 PMID:20814827 RGD:7242426 RGD:730275 NCBI chrNW_004936561:6,314,797...6,333,961
Ensembl chrNW_004936561:6,314,705...6,334,439 		JBrowse link
G As3mt arsenite methyltransferase ISO RGD PMID:11790780 RGD:625365 NCBI chrNW_004936600:3,050,946...3,069,786
Ensembl chrNW_004936600:3,051,129...3,069,690 		JBrowse link
G Carm1 coactivator associated arginine methyltransferase 1 ISO RGD PMID:15866169 RGD:1359044 NCBI chrNW_004936659:1,071,883...1,120,917
Ensembl chrNW_004936659:1,090,164...1,123,920 		JBrowse link
G Comt catechol-O-methyltransferase ISO RGD PMID:12584150 RGD:1359089 NCBI chrNW_004936619:3,847,059...3,883,866
Ensembl chrNW_004936619:3,876,299...3,882,747 		JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:12473678 RGD:1359078 NCBI chrNW_004936659:520,181...565,496
Ensembl chrNW_004936659:520,493...565,416 		JBrowse link
G Gamt guanidinoacetate N-methyltransferase ISO RGD PMID:15533043 RGD:1359081 NCBI chrNW_004936588:721,436...724,475
Ensembl chrNW_004936588:721,313...724,524 		JBrowse link
G Gnmt glycine N-methyltransferase ISO RGD PMID:15347642 RGD:1359070 NCBI chrNW_004936476:16,961,734...16,965,487
Ensembl chrNW_004936476:16,957,270...16,965,346 		JBrowse link
G Hnmt histamine N-methyltransferase ISO RGD PMID:11566133 RGD:1359041 NCBI chrNW_004936469:38,125,877...38,166,429
Ensembl chrNW_004936469:38,122,454...38,166,398 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chrNW_004936474:623,438...637,849
Ensembl chrNW_004936474:623,291...638,193 		JBrowse link
G Nnmt nicotinamide N-methyltransferase ISO RGD PMID:15922112 RGD:1359084 NCBI chrNW_004936612:333,421...351,202
Ensembl chrNW_004936612:333,421...351,202 		JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ISO RGD PMID:8263531 RGD:729481 NCBI chrNW_004936489:2,677,740...2,720,387
Ensembl chrNW_004936489:2,677,484...2,722,263 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase ISO RGD PMID:8344945 RGD:729486 NCBI chrNW_004936741:1,131,792...1,207,460
Ensembl chrNW_004936741:1,128,616...1,207,499 		JBrowse link
G Pnmt phenylethanolamine N-methyltransferase ISO RGD PMID:12438084 RGD:1359087 NCBI chrNW_004936490:14,858,682...14,861,614
Ensembl chrNW_004936490:14,858,603...14,865,321 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 ISO RGD PMID:15866169 RGD:1359044 NCBI chrNW_004936664:3,492,032...3,502,738
Ensembl chrNW_004936664:3,491,920...3,504,667 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 ISO RGD PMID:15866169 RGD:1359044 NCBI chrNW_004936722:1,379,515...1,388,538
Ensembl chrNW_004936722:1,379,515...1,388,546 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 ISO RGD PMID:15866169 RGD:1359044 NCBI chrNW_004936731:1,262,335...1,268,200
Ensembl chrNW_004936731:1,266,738...1,267,865 		JBrowse link
G Rnmt RNA guanine-7 methyltransferase ISO RGD PMID:11472630 RGD:1359071 NCBI chrNW_004936626:3,132,781...3,156,252
Ensembl chrNW_004936626:3,132,772...3,153,920 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ISO RGD PMID:11959841 RGD:1359072 NCBI chrNW_004936580:1,146,286...1,192,842
Ensembl chrNW_004936580:1,146,277...1,192,842 		JBrowse link
methionine cycle/metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase ISO SMPDB
RGD		 PMID:2292587 PMID:11741948 PMID:23073625 RGD:7242425 RGD:7242932 RGD:730275 SMP:00033 NCBI chrNW_004936561:6,314,797...6,333,961
Ensembl chrNW_004936561:6,314,705...6,334,439 		JBrowse link
G Amd1 adenosylmethionine decarboxylase 1 ISO RGD
SMPDB		 PMID:2292587 PMID:23073625 RGD:7242425 RGD:7242932 SMP:00033 NCBI chrNW_004936564:6,656,789...6,675,564
Ensembl chrNW_004936564:6,656,746...6,673,462 		JBrowse link
G As3mt arsenite methyltransferase ISO RGD PMID:11790780 RGD:625365 NCBI chrNW_004936600:3,050,946...3,069,786
Ensembl chrNW_004936600:3,051,129...3,069,690 		JBrowse link
G Asmt acetylserotonin O-methyltransferase ISO RGD PMID:12198599 RGD:1359073 NCBI chrNW_004936644:3,707,365...3,708,601 JBrowse link
G Carm1 coactivator associated arginine methyltransferase 1 ISO RGD PMID:15866169 PMID:21074527 RGD:1359044 RGD:7242552 NCBI chrNW_004936659:1,071,883...1,120,917
Ensembl chrNW_004936659:1,090,164...1,123,920 		JBrowse link
G Cbs cystathionine beta-synthase ISO SMPDB SMP:00033 NCBI chrNW_004936500:976,043...1,003,559
Ensembl chrNW_004936500:987,128...1,003,388 		JBrowse link
G Chdh choline dehydrogenase ISO SMPDB SMP:00033 NCBI chrNW_004936473:4,479,942...4,512,369
Ensembl chrNW_004936473:4,482,170...4,506,763 		JBrowse link
G Comt catechol-O-methyltransferase ISO RGD PMID:12584150 RGD:1359089 NCBI chrNW_004936619:3,847,059...3,883,866
Ensembl chrNW_004936619:3,876,299...3,882,747 		JBrowse link
G Cth cystathionine gamma-lyase ISO SMPDB SMP:00033 NCBI chrNW_004936591:1,619,446...1,643,667
Ensembl chrNW_004936591:1,619,446...1,643,665 		JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO SMPDB
RGD		 PMID:12473678 PMID:22342103 RGD:1359078 RGD:7242551 SMP:00033 NCBI chrNW_004936659:520,181...565,496
Ensembl chrNW_004936659:520,493...565,416 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:22342103 RGD:7242551 NCBI chrNW_004936493:6,963,406...7,013,256
Ensembl chrNW_004936493:6,935,386...7,007,610 		JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:22342103 RGD:7242551 NCBI chrNW_004936485:19,547,836...19,570,716 JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase ISO RGD PMID:12628190 PMID:22194015 RGD:1359080 RGD:7242554 NCBI chrNW_004936588:1,288,447...1,332,489
Ensembl chrNW_004936588:1,288,392...1,330,297 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO RGD PMID:22194015 RGD:7242554 NCBI chrNW_004936527:5,024,077...5,069,152
Ensembl chrNW_004936527:5,024,068...5,063,939 		JBrowse link
G Gamt guanidinoacetate N-methyltransferase ISO RGD PMID:15533043 RGD:1359081 NCBI chrNW_004936588:721,436...724,475
Ensembl chrNW_004936588:721,313...724,524 		JBrowse link
G Gnmt glycine N-methyltransferase ISO RGD PMID:15347642 PMID:22342103 PMID:23073625 RGD:1359070 RGD:7242425 RGD:7242551 NCBI chrNW_004936476:16,961,734...16,965,487
Ensembl chrNW_004936476:16,957,270...16,965,346 		JBrowse link
G Hnmt histamine N-methyltransferase ISO RGD PMID:11566133 RGD:1359041 NCBI chrNW_004936469:38,125,877...38,166,429
Ensembl chrNW_004936469:38,122,454...38,166,398 		JBrowse link
G Il4i1 interleukin 4 induced 1 ISO SMPDB SMP:00033 NCBI chrNW_004936664:3,674,612...3,715,036
Ensembl chrNW_004936664:3,675,805...3,686,262 		JBrowse link
G Kmt5a lysine methyltransferase 5A ISO RGD PMID:22194015 RGD:7242554 NCBI chrNW_004936558:1,346,040...1,366,601 JBrowse link
G LOC101972215 betaine--homocysteine S-methyltransferase 1 ISO RGD
SMPDB		 PMID:15845641 PMID:23073625 RGD:1359026 RGD:7242425 SMP:00033 NCBI chrNW_004936549:6,938,100...6,956,380
Ensembl chrNW_004936549:6,938,092...6,957,363 		JBrowse link
G Mars1 methionyl-tRNA synthetase 1 ISO SMPDB SMP:00033 NCBI chrNW_004936646:1,644,457...1,665,081
Ensembl chrNW_004936646:1,644,457...1,665,086 		JBrowse link
G Mat1a methionine adenosyltransferase 1A ISO RGD PMID:2292587 PMID:9202427 PMID:23073625 RGD:1359039 RGD:7242425 RGD:7242932 NCBI chrNW_004936716:126,628...142,986
Ensembl chrNW_004936716:126,574...143,155 		JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO SMPDB
RGD		 PMID:11099469 PMID:23073625 RGD:1359040 RGD:7242425 SMP:00033 NCBI chrNW_004936712:1,710,513...1,717,339
Ensembl chrNW_004936712:1,709,716...1,717,499 		JBrowse link
G Mat2b methionine adenosyltransferase 2 non-catalytic beta subunit ISO SMPDB
RGD		 PMID:23073625 RGD:7242425 SMP:00033 NCBI chrNW_004936515:544,218...561,014
Ensembl chrNW_004936515:544,037...561,182 		JBrowse link
G Mrm2 mitochondrial rRNA methyltransferase 2 ISO RGD PMID:11827451 RGD:1359074 NCBI chrNW_004936823:1,679...7,064
Ensembl chrNW_004936823:1,423...7,065 		JBrowse link
G Msrb2 methionine sulfoxide reductase B2 ISO SMPDB SMP:00033 NCBI chrNW_004936520:5,035,442...5,052,736 JBrowse link
G Msrb3 methionine sulfoxide reductase B3 ISO SMPDB SMP:00033 NCBI chrNW_004936545:3,480,995...3,637,913
Ensembl chrNW_004936545:3,480,853...3,640,924 		JBrowse link
G Mtap methylthioadenosine phosphorylase ISO RGD
SMPDB		 PMID:2292587 RGD:7242932 SMP:00033 NCBI chrNW_004936652:3,431,588...3,468,770
Ensembl chrNW_004936652:3,431,171...3,472,071 		JBrowse link
G Mtfmt mitochondrial methionyl-tRNA formyltransferase ISO SMPDB SMP:00033 NCBI chrNW_004936471:25,334,544...25,352,520
Ensembl chrNW_004936471:25,335,068...25,352,480 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO SMPDB
RGD		 PMID:11933257 RGD:1535021 SMP:00033 NCBI chrNW_004936474:623,438...637,849
Ensembl chrNW_004936474:623,291...638,193 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD
SMPDB		 PMID:15845641 PMID:20814827 PMID:23073625 RGD:1359026 RGD:7242425 RGD:7242426 SMP:00033 NCBI chrNW_004936484:16,087,924...16,180,089
Ensembl chrNW_004936484:16,087,923...16,180,148 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:15979034 PMID:20814827 RGD:1359037 RGD:7242426 NCBI chrNW_004936643:379,790...410,034
Ensembl chrNW_004936643:380,968...409,464 		JBrowse link
G Nnmt nicotinamide N-methyltransferase ISO RGD PMID:15922112 RGD:1359084 NCBI chrNW_004936612:333,421...351,202
Ensembl chrNW_004936612:333,421...351,202 		JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ISO RGD PMID:8263531 RGD:729481 NCBI chrNW_004936489:2,677,740...2,720,387
Ensembl chrNW_004936489:2,677,484...2,722,263 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase ISO RGD PMID:8344945 RGD:729486 NCBI chrNW_004936741:1,131,792...1,207,460
Ensembl chrNW_004936741:1,128,616...1,207,499 		JBrowse link
G Pnmt phenylethanolamine N-methyltransferase ISO RGD PMID:12438084 RGD:1359087 NCBI chrNW_004936490:14,858,682...14,861,614
Ensembl chrNW_004936490:14,858,603...14,865,321 		JBrowse link
G Prmt1 protein arginine methyltransferase 1 ISO RGD PMID:15866169 PMID:21074527 RGD:1359044 RGD:7242552 NCBI chrNW_004936664:3,492,032...3,502,738
Ensembl chrNW_004936664:3,491,920...3,504,667 		JBrowse link
G Prmt2 protein arginine methyltransferase 2 ISO RGD PMID:21074527 RGD:7242552 NCBI chrNW_004936778:12,988...31,217
Ensembl chrNW_004936778:12,967...29,077 		JBrowse link
G Prmt3 protein arginine methyltransferase 3 ISO RGD PMID:21074527 RGD:7242552 NCBI chrNW_004936654:1,336,546...1,464,959
Ensembl chrNW_004936654:1,336,429...1,461,476 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 ISO RGD PMID:15866169 PMID:21074527 RGD:1359044 RGD:7242552 NCBI chrNW_004936722:1,379,515...1,388,538
Ensembl chrNW_004936722:1,379,515...1,388,546 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 ISO RGD PMID:15866169 PMID:21074527 RGD:1359044 RGD:7242552 NCBI chrNW_004936731:1,262,335...1,268,200
Ensembl chrNW_004936731:1,266,738...1,267,865 		JBrowse link
G Prmt7 protein arginine methyltransferase 7 ISO RGD PMID:21074527 RGD:7242552 NCBI chrNW_004936475:18,632,022...18,667,515
Ensembl chrNW_004936475:18,632,052...18,672,247 		JBrowse link
G Rnmt RNA guanine-7 methyltransferase ISO RGD PMID:11472630 RGD:1359071 NCBI chrNW_004936626:3,132,781...3,156,252
Ensembl chrNW_004936626:3,132,772...3,153,920 		JBrowse link
G Setd7 SET domain containing 7, histone lysine methyltransferase ISO RGD PMID:22194015 RGD:7242554 NCBI chrNW_004936535:8,094,479...8,143,108
Ensembl chrNW_004936535:8,094,178...8,137,580 		JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 ISO RGD PMID:11959841 RGD:1359072 NCBI chrNW_004936580:1,146,286...1,192,842
Ensembl chrNW_004936580:1,146,277...1,192,842 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 ISO SMPDB SMP:00033 NCBI chrNW_004936741:1,849,239...1,877,724
Ensembl chrNW_004936741:1,849,609...1,877,727 		JBrowse link
G Sms spermine synthase ISO RGD PMID:23073625 RGD:7242425 NCBI chrNW_004936624:2,345,573...2,402,157
Ensembl chrNW_004936624:2,346,018...2,401,893 		JBrowse link
G Smyd2 SET and MYND domain containing 2 ISO RGD PMID:22194015 RGD:7242554 NCBI chrNW_004936628:3,917,898...3,965,382
Ensembl chrNW_004936628:3,918,230...3,965,387 		JBrowse link
G Srm spermidine synthase ISO SMPDB
RGD		 PMID:23073625 RGD:7242425 SMP:00033 NCBI chrNW_004936474:121,135...124,894
Ensembl chrNW_004936474:118,000...124,963 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase ISO RGD PMID:22194015 RGD:7242554 NCBI chrNW_004936721:646,778...661,144
Ensembl chrNW_004936721:646,772...661,091 		JBrowse link
G Suv39h2 SUV39H2 histone lysine methyltransferase ISO RGD PMID:22194015 RGD:7242554 NCBI chrNW_004936613:1,443,663...1,467,776
Ensembl chrNW_004936613:1,443,629...1,467,229 		JBrowse link
polyamine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 ISO RGD PMID:10430362 PMID:13678416 RGD:1578320 RGD:7244193 NCBI chrNW_004936564:6,656,789...6,675,564
Ensembl chrNW_004936564:6,656,746...6,673,462 		JBrowse link
G Azin1 antizyme inhibitor 1 ISO RGD PMID:21849468 RGD:7244195 NCBI chrNW_004936470:40,801,943...40,832,543
Ensembl chrNW_004936470:40,801,943...40,834,003 		JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 ISO RGD PMID:21849468 RGD:7244195 NCBI chrNW_004936588:1,356,769...1,361,037
Ensembl chrNW_004936588:1,356,769...1,361,037 		JBrowse link
G Oaz2 ornithine decarboxylase antizyme 2 ISO RGD PMID:21849468 RGD:7244195 NCBI chrNW_004936471:25,069,035...25,081,640
Ensembl chrNW_004936471:25,070,127...25,081,431 		JBrowse link
G Oaz3 ornithine decarboxylase antizyme 3 ISO RGD PMID:21849468 RGD:7244195 NCBI chrNW_004936580:1,963,372...1,966,086
Ensembl chrNW_004936580:1,963,415...1,965,950 		JBrowse link
G Odc1 ornithine decarboxylase 1 ISO RGD PMID:10430362 PMID:13678416 RGD:1578320 RGD:7244193 NCBI chrNW_004936532:6,581,717...6,587,116 JBrowse link
G Paox polyamine oxidase ISO RGD PMID:13678416 PMID:15541750 RGD:7244190 RGD:7244193 NCBI chrNW_004936486:19,503,631...19,511,918
Ensembl chrNW_004936486:19,503,631...19,511,920 		JBrowse link
G Sat1 spermidine/spermine N1-acetyltransferase 1 ISO RGD PMID:13678416 PMID:15541750 RGD:7244190 RGD:7244193 NCBI chrNW_004936624:756,761...759,979
Ensembl chrNW_004936624:756,712...759,983 		JBrowse link
G Smox spermine oxidase ISO RGD PMID:13678416 PMID:15541750 RGD:7244190 RGD:7244193 NCBI chrNW_004936485:14,566,570...14,603,323
Ensembl chrNW_004936485:14,566,277...14,603,338 		JBrowse link
G Sms spermine synthase ISO RGD PMID:13678416 RGD:7244193 NCBI chrNW_004936624:2,345,573...2,402,157
Ensembl chrNW_004936624:2,346,018...2,401,893 		JBrowse link
G Srm spermidine synthase ISO RGD PMID:13678416 RGD:7244193 NCBI chrNW_004936474:121,135...124,894
Ensembl chrNW_004936474:118,000...124,963 		JBrowse link
putrescine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 ISO RGD PMID:10430362 RGD:1578320 NCBI chrNW_004936564:6,656,789...6,675,564
Ensembl chrNW_004936564:6,656,746...6,673,462 		JBrowse link
G Odc1 ornithine decarboxylase 1 ISO RGD PMID:10430362 RGD:1578320 NCBI chrNW_004936532:6,581,717...6,587,116 JBrowse link
remethylation pathway of homocysteine metabolism - cobalamin dependent term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chrNW_004936474:623,438...637,849
Ensembl chrNW_004936474:623,291...638,193 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:15845641 PMID:20814827 RGD:1359026 RGD:7242426 NCBI chrNW_004936484:16,087,924...16,180,089
Ensembl chrNW_004936484:16,087,923...16,180,148 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:15979034 PMID:20814827 RGD:1359037 RGD:7242426 NCBI chrNW_004936643:379,790...410,034
Ensembl chrNW_004936643:380,968...409,464 		JBrowse link
remethylation pathway of homocysteine metabolism - cobalamin independent, betaine dependent term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase ISO SMPDB SMP:00123 NCBI chrNW_004936561:6,314,797...6,333,961
Ensembl chrNW_004936561:6,314,705...6,334,439 		JBrowse link
G Aldh7a1 aldehyde dehydrogenase 7 family member A1 ISO SMPDB SMP:00123 NCBI chrNW_004936575:6,467,224...6,506,052
Ensembl chrNW_004936575:6,467,340...6,506,006 		JBrowse link
G Chdh choline dehydrogenase ISO SMPDB SMP:00123 NCBI chrNW_004936473:4,479,942...4,512,369
Ensembl chrNW_004936473:4,482,170...4,506,763 		JBrowse link
G LOC101972215 betaine--homocysteine S-methyltransferase 1 ISO RGD
SMPDB		 PMID:15845641 PMID:20346934 PMID:20814827 RGD:1359026 RGD:7242426 RGD:7242428 SMP:00123 NCBI chrNW_004936549:6,938,100...6,956,380
Ensembl chrNW_004936549:6,938,092...6,957,363 		JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO SMPDB SMP:00123 NCBI chrNW_004936712:1,710,513...1,717,339
Ensembl chrNW_004936712:1,709,716...1,717,499 		JBrowse link
G Mat2b methionine adenosyltransferase 2 non-catalytic beta subunit ISO SMPDB SMP:00123 NCBI chrNW_004936515:544,218...561,014
Ensembl chrNW_004936515:544,037...561,182 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO SMPDB SMP:00123 NCBI chrNW_004936484:16,087,924...16,180,089
Ensembl chrNW_004936484:16,087,923...16,180,148 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase ISO SMPDB SMP:00123 NCBI chrNW_004936741:1,131,792...1,207,460
Ensembl chrNW_004936741:1,128,616...1,207,499 		JBrowse link
retinoic acid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:21138835 PMID:21621639 RGD:6484672 RGD:6771354 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 ISO RGD PMID:15950969 PMID:21138835 PMID:21621639 RGD:6484672 RGD:6771322 RGD:6771354 NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 ISO RGD PMID:15950969 PMID:21138835 PMID:21621639 RGD:6484672 RGD:6771322 RGD:6771354 NCBI chrNW_004936483:2,930,781...2,967,309
Ensembl chrNW_004936483:2,930,789...2,967,346 		JBrowse link
G Crabp1 cellular retinoic acid binding protein 1 ISO RGD PMID:21621639 RGD:6484672 NCBI chrNW_004936471:36,665,641...36,672,626
Ensembl chrNW_004936471:36,662,647...36,672,606 		JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 ISO RGD PMID:15950969 PMID:21621639 RGD:6484672 RGD:6771322 NCBI chrNW_004936580:5,861,051...5,866,818
Ensembl chrNW_004936580:5,860,562...5,866,856 		JBrowse link
G Dhrs9 dehydrogenase/reductase 9 ISO RGD PMID:15950969 PMID:21138835 PMID:21621639 RGD:6484672 RGD:6771322 RGD:6771354 NCBI chrNW_004936469:10,465,701...10,487,534
Ensembl chrNW_004936469:10,465,701...10,487,534 		JBrowse link
G Fabp5 fatty acid binding protein 5 ISO RGD PMID:21621639 RGD:6484672 NCBI chrNW_004936656:2,881,552...2,886,192 JBrowse link
G LOC101965278 retinol dehydrogenase 16 ISO RGD PMID:21138835 PMID:21621639 RGD:6484672 RGD:6771354 NCBI chrNW_004936646:1,195,200...1,200,778
Ensembl chrNW_004936646:1,194,547...1,200,897 		JBrowse link
G LOC101975674 cytochrome P450 26B1 ISO RGD PMID:21138835 PMID:21621639 RGD:6484672 RGD:6771354 NCBI chrNW_004936491:16,010,394...16,028,852
Ensembl chrNW_004936491:16,010,070...16,028,895 		JBrowse link
G LOC101977861 cytochrome P450 26A1 ISO RGD PMID:21621639 RGD:6484672 NCBI chrNW_004936601:1,810,572...1,815,927
Ensembl chrNW_004936601:1,809,992...1,814,074 		JBrowse link
G LOC101978131 cytochrome P450 26C1 ISO RGD PMID:21621639 RGD:6484672 NCBI chrNW_004936601:1,818,037...1,828,400
Ensembl chrNW_004936601:1,817,983...1,828,185 		JBrowse link
G Lrat lecithin retinol acyltransferase ISO RGD PMID:21621639 RGD:6484672 NCBI chrNW_004936576:1,491,480...1,498,568
Ensembl chrNW_004936576:1,492,297...1,501,917 		JBrowse link
G Rbp1 retinol binding protein 1 ISO RGD PMID:15950969 PMID:21621639 RGD:6484672 RGD:6771322 NCBI chrNW_004936540:1,600,673...1,626,573
Ensembl chrNW_004936540:1,600,398...1,626,652 		JBrowse link
G Rbp4 retinol binding protein 4 ISO RGD PMID:21621639 PMID:21782034 RGD:6484671 RGD:6484672 NCBI chrNW_004936601:1,401,215...1,410,195
Ensembl chrNW_004936601:1,402,691...1,410,208 		JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO RGD PMID:21138835 PMID:21621639 RGD:6484672 RGD:6771354 NCBI chrNW_004936648:2,060,131...2,088,021
Ensembl chrNW_004936648:2,060,125...2,088,833 		JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 ISO RGD PMID:21621639 PMID:21782034 RGD:6484671 RGD:6484672 NCBI chrNW_004936471:33,224,174...33,245,076
Ensembl chrNW_004936471:33,224,859...33,245,030 		JBrowse link
G Ttr transthyretin ISO RGD PMID:21782034 RGD:6484671 NCBI chrNW_004936682:1,628,489...1,635,495
Ensembl chrNW_004936682:1,628,341...1,635,566 		JBrowse link
retinoic acid signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:19471584 RGD:6484676 NCBI chrNW_004936493:7,368,393...7,605,754
Ensembl chrNW_004936493:7,368,462...7,465,615 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO RGD PMID:19471584 RGD:6484676 NCBI chrNW_004936496:14,844,923...15,102,922
Ensembl chrNW_004936496:14,844,855...15,016,454 		JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO RGD PMID:19471584 RGD:6484676 NCBI chrNW_004936514:5,900,135...5,967,862
Ensembl chrNW_004936514:5,901,601...5,967,865 		JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO RGD PMID:19471584 RGD:6484676 NCBI chrNW_004936821:382,756...538,254
Ensembl chrNW_004936821:382,383...536,223 		JBrowse link
G Ncor2 nuclear receptor corepressor 2 ISO RGD PMID:19471584 RGD:6484676 NCBI chrNW_004936558:658,723...775,263
Ensembl chrNW_004936558:677,610...775,288 		JBrowse link
G Nrip1 nuclear receptor interacting protein 1 ISO RGD PMID:19471584 RGD:6484676 NCBI chrNW_004936505:7,886,327...7,966,969
Ensembl chrNW_004936505:7,884,724...7,966,928 		JBrowse link
G Prame PRAME nuclear receptor transcriptional regulator ISO RGD PMID:19471584 RGD:6484676 NCBI chrNW_004936619:1,748,337...1,751,748 JBrowse link
G Psmc5 proteasome 26S subunit, ATPase 5 ISO RGD PMID:19471584 RGD:6484676 NCBI chrNW_004936541:4,470,210...4,475,233 JBrowse link
G Rara retinoic acid receptor alpha ISO RGD PMID:17132850 PMID:17320364 PMID:19471584 RGD:6484674 RGD:6484676 RGD:6484731 NCBI chrNW_004936490:15,376,217...15,420,638
Ensembl chrNW_004936490:15,376,205...15,421,611 		JBrowse link
G Rarb retinoic acid receptor beta ISO RGD PMID:17132850 PMID:17320364 PMID:19471584 RGD:6484674 RGD:6484676 RGD:6484731 NCBI chrNW_004936473:16,983,829...17,146,517
Ensembl chrNW_004936473:16,983,600...17,148,885 		JBrowse link
G Rarg retinoic acid receptor gamma ISO RGD PMID:17132850 PMID:17320364 PMID:19471584 RGD:6484674 RGD:6484676 RGD:6484731 NCBI chrNW_004936512:10,502,954...10,524,796
Ensembl chrNW_004936512:10,500,622...10,524,824 		JBrowse link
G Rxra retinoid X receptor alpha ISO RGD PMID:17132853 PMID:17320364 RGD:6484675 RGD:6484731 NCBI chrNW_004936669:2,735,111...2,763,060
Ensembl chrNW_004936669:2,738,448...2,763,070 		JBrowse link
G Rxrb retinoid X receptor beta ISO RGD PMID:17132853 PMID:17320364 RGD:6484675 RGD:6484731 NCBI chrNW_004936476:25,655,164...25,662,369
Ensembl chrNW_004936476:25,655,209...25,662,416 		JBrowse link
G Rxrg retinoid X receptor gamma ISO RGD PMID:17132853 PMID:17320364 RGD:6484675 RGD:6484731 NCBI chrNW_004936481:19,789,753...19,826,665
Ensembl chrNW_004936481:19,789,641...19,826,698 		JBrowse link
G Trim24 tripartite motif containing 24 ISO RGD PMID:19471584 RGD:6484676 NCBI chrNW_004936592:2,902,805...2,962,602
Ensembl chrNW_004936592:2,863,743...2,963,977 		JBrowse link
retinoid cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 ISO RGD PMID:21447403 RGD:6893650 NCBI chrNW_004936537:4,969,456...5,326,682
Ensembl chrNW_004936537:5,202,093...5,323,527 		JBrowse link
G Lrat lecithin retinol acyltransferase ISO RGD PMID:21447403 RGD:6893650 NCBI chrNW_004936576:1,491,480...1,498,568
Ensembl chrNW_004936576:1,492,297...1,501,917 		JBrowse link
G Opn1sw opsin 1, short wave sensitive ISO RGD PMID:21704730 RGD:6893536 NCBI chrNW_004936479:15,696,063...15,702,311
Ensembl chrNW_004936479:15,699,604...15,702,352 		JBrowse link
G Rbp1 retinol binding protein 1 ISO RGD PMID:21447403 RGD:6893650 NCBI chrNW_004936540:1,600,673...1,626,573
Ensembl chrNW_004936540:1,600,398...1,626,652 		JBrowse link
G Rbp3 retinol binding protein 3 ISO RGD PMID:21447403 RGD:6893650 NCBI chrNW_004936554:7,329,155...7,340,434
Ensembl chrNW_004936554:7,329,028...7,338,074 		JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO RGD PMID:21447403 RGD:6893650 NCBI chrNW_004936648:2,060,131...2,088,021
Ensembl chrNW_004936648:2,060,125...2,088,833 		JBrowse link
G Rdh11 retinol dehydrogenase 11 ISO RGD PMID:21447403 RGD:6893650 NCBI chrNW_004936495:11,065,946...11,082,104
Ensembl chrNW_004936495:11,066,660...11,082,044 		JBrowse link
G Rdh12 retinol dehydrogenase 12 ISO RGD PMID:21447403 RGD:6893650 NCBI chrNW_004936495:11,111,247...11,121,976
Ensembl chrNW_004936495:11,111,105...11,121,341 		JBrowse link
G Rdh5 retinol dehydrogenase 5 ISO RGD PMID:21447403 RGD:6893650 NCBI chrNW_004936646:191,136...195,279
Ensembl chrNW_004936646:191,128...199,777 		JBrowse link
G Rdh8 retinol dehydrogenase 8 ISO RGD PMID:21447403 RGD:6893650 NCBI chrNW_004936659:439,541...445,645 JBrowse link
G Rho rhodopsin ISO RGD PMID:21704730 RGD:6893536 NCBI chrNW_004936602:896,730...901,480
Ensembl chrNW_004936602:894,617...901,664 		JBrowse link
G Rlbp1 retinaldehyde binding protein 1 ISO RGD PMID:20188572 RGD:6903223 NCBI chrNW_004936483:15,086,485...15,097,980
Ensembl chrNW_004936483:15,084,756...15,096,072 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO RGD PMID:21447403 PMID:21785167 RGD:6893650 RGD:6893661 NCBI chrNW_004936591:3,347,346...3,368,062
Ensembl chrNW_004936591:3,347,272...3,368,015 		JBrowse link
retinol metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 ISO RGD PMID:21718801 RGD:6484679 NCBI chrNW_004936559:7,177,887...7,312,660
Ensembl chrNW_004936559:7,177,904...7,312,741 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 ISO SMPDB SMP:00074 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 ISO RGD
SMPDB		 PMID:12547725 RGD:1576367 SMP:00074 NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335 		JBrowse link
G Awat1 acyl-CoA wax alcohol acyltransferase 1 ISO SMPDB SMP:00074 NCBI chrNW_004936762:1,238,239...1,244,330
Ensembl chrNW_004936762:1,238,473...1,244,330 		JBrowse link
G Bco1 beta-carotene oxygenase 1 ISO SMPDB
RGD		 PMID:21569862 PMID:21718801 RGD:6484679 RGD:6903956 SMP:00074 NCBI chrNW_004936475:28,859,222...28,890,407
Ensembl chrNW_004936475:28,859,318...28,889,934 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) ISO RGD PMID:21718801 RGD:6484679 NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365 		JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 ISO SMPDB SMP:00074 NCBI chrNW_004936470:7,916,438...7,926,089
Ensembl chrNW_004936470:7,916,438...7,926,088 		JBrowse link
G Dhrs3 dehydrogenase/reductase 3 ISO SMPDB SMP:00074 NCBI chrNW_004936474:1,237,177...1,270,299
Ensembl chrNW_004936474:1,235,962...1,269,510 		JBrowse link
G Dhrs9 dehydrogenase/reductase 9 ISO SMPDB SMP:00074 NCBI chrNW_004936469:10,465,701...10,487,534
Ensembl chrNW_004936469:10,465,701...10,487,534 		JBrowse link
G Dnajb11 DnaJ heat shock protein family (Hsp40) member B11 ISO SMPDB SMP:00074 NCBI chrNW_004936578:3,360,259...3,374,634
Ensembl chrNW_004936578:3,360,259...3,374,612 		JBrowse link
G Erp29 endoplasmic reticulum protein 29 ISO SMPDB SMP:00074 NCBI chrNW_004936558:4,531,397...4,538,943
Ensembl chrNW_004936558:4,531,471...4,538,943 		JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 ISO SMPDB SMP:00074 NCBI chrNW_004936492:10,513,908...10,528,281
Ensembl chrNW_004936492:10,513,908...10,528,285 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO SMPDB SMP:00074 NCBI chrNW_004936487:13,348,465...13,352,717
Ensembl chrNW_004936487:13,348,465...13,352,717 		JBrowse link
G Hyou1 hypoxia up-regulated 1 ISO SMPDB SMP:00074 NCBI chrNW_004936542:4,005,616...4,018,135
Ensembl chrNW_004936542:4,005,610...4,018,135 		JBrowse link
G LOC101965278 retinol dehydrogenase 16 ISO SMPDB SMP:00074 NCBI chrNW_004936646:1,195,200...1,200,778
Ensembl chrNW_004936646:1,194,547...1,200,897 		JBrowse link
G LOC101977861 cytochrome P450 26A1 ISO SMPDB SMP:00074 NCBI chrNW_004936601:1,810,572...1,815,927
Ensembl chrNW_004936601:1,809,992...1,814,074 		JBrowse link
G Lrat lecithin retinol acyltransferase ISO SMPDB
RGD		 PMID:21718801 RGD:6484679 SMP:00074 NCBI chrNW_004936576:1,491,480...1,498,568
Ensembl chrNW_004936576:1,492,297...1,501,917 		JBrowse link
G Pdia2 protein disulfide isomerase family A member 2 ISO SMPDB SMP:00074 NCBI chrNW_004936501:634,034...637,177
Ensembl chrNW_004936501:634,118...637,000 		JBrowse link
G Pdia4 protein disulfide isomerase family A member 4 ISO SMPDB SMP:00074 NCBI chrNW_004936527:5,189,189...5,210,621
Ensembl chrNW_004936527:5,188,463...5,210,629 		JBrowse link
G Pdia6 protein disulfide isomerase family A member 6 ISO SMPDB SMP:00074 NCBI chrNW_004936532:6,865,994...6,887,396
Ensembl chrNW_004936532:6,865,994...6,881,475 		JBrowse link
G Plb1 phospholipase B1 ISO RGD PMID:8117729 PMID:21718801 RGD:6484679 RGD:6903951 NCBI chrNW_004936493:4,112,632...4,210,882
Ensembl chrNW_004936493:4,112,858...4,232,492 		JBrowse link
G Pnpla4 patatin like phospholipase domain containing 4 ISO SMPDB SMP:00074 NCBI chrNW_004936644:1,091,794...1,113,621
Ensembl chrNW_004936644:1,093,388...1,112,557 		JBrowse link
G Ppib peptidylprolyl isomerase B ISO SMPDB SMP:00074 NCBI chrNW_004936471:24,633,769...24,640,246
Ensembl chrNW_004936471:24,632,311...24,640,316 		JBrowse link
G Rbp2 retinol binding protein 2 ISO RGD PMID:21718801 RGD:6484679 NCBI chrNW_004936540:1,547,406...1,571,374
Ensembl chrNW_004936540:1,547,386...1,571,430 		JBrowse link
G Rdh11 retinol dehydrogenase 11 ISO SMPDB SMP:00074 NCBI chrNW_004936495:11,065,946...11,082,104
Ensembl chrNW_004936495:11,066,660...11,082,044 		JBrowse link
G Rdh12 retinol dehydrogenase 12 ISO SMPDB SMP:00074 NCBI chrNW_004936495:11,111,247...11,121,976
Ensembl chrNW_004936495:11,111,105...11,121,341 		JBrowse link
G Rdh8 retinol dehydrogenase 8 ISO SMPDB SMP:00074 NCBI chrNW_004936659:439,541...445,645 JBrowse link
G Retsat retinol saturase ISO SMPDB SMP:00074 NCBI chrNW_004936712:1,826,813...1,837,048
Ensembl chrNW_004936712:1,826,923...1,841,141 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO SMPDB SMP:00074 NCBI chrNW_004936591:3,347,346...3,368,062
Ensembl chrNW_004936591:3,347,272...3,368,015 		JBrowse link
G Scarb1 scavenger receptor class B member 1 ISO RGD PMID:21718801 RGD:6484679 NCBI chrNW_004936558:530,828...555,098
Ensembl chrNW_004936558:530,828...552,892 		JBrowse link
G Sdf2l1 stromal cell derived factor 2 like 1 ISO SMPDB SMP:00074 NCBI chrNW_004936619:2,049,920...2,051,944
Ensembl chrNW_004936619:2,049,922...2,051,944 		JBrowse link
spermidine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 ISO RGD
SMPDB		 PMID:1415709 PMID:10430362 PMID:10712236 RGD:1578320 RGD:7242911 RGD:7242912 SMP:00445 NCBI chrNW_004936564:6,656,789...6,675,564
Ensembl chrNW_004936564:6,656,746...6,673,462 		JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO SMPDB SMP:00445 NCBI chrNW_004936712:1,710,513...1,717,339
Ensembl chrNW_004936712:1,709,716...1,717,499 		JBrowse link
G Mat2b methionine adenosyltransferase 2 non-catalytic beta subunit ISO SMPDB SMP:00445 NCBI chrNW_004936515:544,218...561,014
Ensembl chrNW_004936515:544,037...561,182 		JBrowse link
G Odc1 ornithine decarboxylase 1 ISO SMPDB
RGD		 PMID:1415709 PMID:2292587 PMID:10430362 RGD:1578320 RGD:7242912 RGD:7242932 SMP:00445 NCBI chrNW_004936532:6,581,717...6,587,116 JBrowse link
G Sat1 spermidine/spermine N1-acetyltransferase 1 ISO RGD PMID:2292587 RGD:7242932 NCBI chrNW_004936624:756,761...759,979
Ensembl chrNW_004936624:756,712...759,983 		JBrowse link
G Sms spermine synthase ISO SMPDB SMP:00445 NCBI chrNW_004936624:2,345,573...2,402,157
Ensembl chrNW_004936624:2,346,018...2,401,893 		JBrowse link
G Srm spermidine synthase ISO RGD
SMPDB		 PMID:2292587 PMID:16931179 PMID:23073625 RGD:7242425 RGD:7242920 RGD:7242932 SMP:00445 NCBI chrNW_004936474:121,135...124,894
Ensembl chrNW_004936474:118,000...124,963 		JBrowse link
spermine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 ISO SMPDB
RGD		 PMID:1415709 PMID:10430362 PMID:10712236 RGD:1578320 RGD:7242911 RGD:7242912 SMP:00445 NCBI chrNW_004936564:6,656,789...6,675,564
Ensembl chrNW_004936564:6,656,746...6,673,462 		JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO SMPDB SMP:00445 NCBI chrNW_004936712:1,710,513...1,717,339
Ensembl chrNW_004936712:1,709,716...1,717,499 		JBrowse link
G Mat2b methionine adenosyltransferase 2 non-catalytic beta subunit ISO SMPDB SMP:00445 NCBI chrNW_004936515:544,218...561,014
Ensembl chrNW_004936515:544,037...561,182 		JBrowse link
G Odc1 ornithine decarboxylase 1 ISO SMPDB
RGD		 PMID:1415709 PMID:2292587 PMID:10430362 RGD:1578320 RGD:7242912 RGD:7242932 SMP:00445 NCBI chrNW_004936532:6,581,717...6,587,116 JBrowse link
G Sat1 spermidine/spermine N1-acetyltransferase 1 ISO RGD PMID:2292587 RGD:7242932 NCBI chrNW_004936624:756,761...759,979
Ensembl chrNW_004936624:756,712...759,983 		JBrowse link
G Sms spermine synthase ISO RGD
SMPDB		 PMID:2292587 PMID:23073625 RGD:7242425 RGD:7242932 SMP:00445 NCBI chrNW_004936624:2,345,573...2,402,157
Ensembl chrNW_004936624:2,346,018...2,401,893 		JBrowse link
G Srm spermidine synthase ISO SMPDB SMP:00445 NCBI chrNW_004936474:121,135...124,894
Ensembl chrNW_004936474:118,000...124,963 		JBrowse link
transsulfuration pathway of homocysteine metabolism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase ISO SMPDB
RGD		 PMID:20162368 RGD:7242427 SMP:00455 NCBI chrNW_004936500:976,043...1,003,559
Ensembl chrNW_004936500:987,128...1,003,388 		JBrowse link
G Cdo1 cysteine dioxygenase type 1 ISO RGD PMID:20162368 RGD:7242427 NCBI chrNW_004936742:981,863...993,271
Ensembl chrNW_004936742:979,368...993,257 		JBrowse link
G Csad cysteine sulfinic acid decarboxylase ISO RGD PMID:20162368 RGD:7242427 NCBI chrNW_004936512:10,447,457...10,475,231
Ensembl chrNW_004936512:10,447,461...10,474,985 		JBrowse link
G Cth cystathionine gamma-lyase ISO SMPDB
RGD		 PMID:20162368 RGD:7242427 SMP:00455 NCBI chrNW_004936591:1,619,446...1,643,667
Ensembl chrNW_004936591:1,619,446...1,643,665 		JBrowse link
visual phototransduction pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arr3 arrestin 3 ISO RGD PMID:21824527 PMID:22074925 RGD:6893539 RGD:6893556 NCBI chrNW_004936762:1,194,251...1,207,914
Ensembl chrNW_004936762:1,194,166...1,208,844 		JBrowse link
G Cimip3 ciliary microtubule inner protein 3 ISO RGD PMID:22074925 RGD:6893539
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 ISO RGD PMID:12087135 RGD:6893549 NCBI chrNW_004936482:14,091,343...14,107,793
Ensembl chrNW_004936482:14,091,913...14,107,787 		JBrowse link
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 ISO RGD PMID:12087135 RGD:6893549 NCBI chrNW_004936744:1,499,431...1,537,784
Ensembl chrNW_004936744:1,514,821...1,540,580 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO RGD PMID:12087135 RGD:6893549 NCBI chrNW_004936475:9,844,438...9,908,009 JBrowse link
G Cngb3 cyclic nucleotide gated channel subunit beta 3 ISO RGD PMID:12087135 RGD:6893549 NCBI chrNW_004936544:1,166,896...1,305,339
Ensembl chrNW_004936544:1,166,508...1,305,457 		JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936529:1,735,258...1,740,297
Ensembl chrNW_004936529:1,735,440...1,742,567 		JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936704:1,079,255...1,093,732
Ensembl chrNW_004936704:1,084,587...1,093,691 		JBrowse link
G Gnb1 G protein subunit beta 1 ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936737:1,518,855...1,554,926
Ensembl chrNW_004936737:1,524,325...1,555,102 		JBrowse link
G Gnb3 G protein subunit beta 3 ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936709:970,169...977,059
Ensembl chrNW_004936709:970,172...976,863 		JBrowse link
G Gnb5 G protein subunit beta 5 ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936471:13,952,462...14,001,663
Ensembl chrNW_004936471:13,955,991...13,997,073 		JBrowse link
G Gngt1 G protein subunit gamma transducin 1 ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936803:67,933...71,508
Ensembl chrNW_004936803:67,608...71,541 		JBrowse link
G Gngt2 G protein subunit gamma transducin 2 ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936490:12,292,462...12,294,302
Ensembl chrNW_004936490:12,292,457...12,294,199 		JBrowse link
G Grk1 G protein-coupled receptor kinase 1 ISO RGD PMID:21903131 RGD:6893555 NCBI chrNW_004936472:152,202...165,134
Ensembl chrNW_004936472:151,854...165,281 		JBrowse link
G Grk7 G protein-coupled receptor kinase 7 ISO RGD PMID:21903131 RGD:6893555 NCBI chrNW_004936540:3,516,706...3,553,102
Ensembl chrNW_004936540:3,515,932...3,553,803 		JBrowse link
G Guca1b guanylate cyclase activator 1B ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936476:17,679,505...17,688,970
Ensembl chrNW_004936476:17,679,500...17,691,037 		JBrowse link
G Gucy2d guanylate cyclase 2D, retinal ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936595:1,235,747...1,250,294
Ensembl chrNW_004936595:1,235,711...1,250,354 		JBrowse link
G Gucy2f guanylate cyclase 2F, retinal ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936499:5,653,384...5,752,732 JBrowse link
G Opn1sw opsin 1, short wave sensitive ISO RGD PMID:21704730 RGD:6893536 NCBI chrNW_004936479:15,696,063...15,702,311
Ensembl chrNW_004936479:15,699,604...15,702,352 		JBrowse link
G Pde6a phosphodiesterase 6A ISO RGD PMID:15224133 RGD:6893540 NCBI chrNW_004936504:5,018,171...5,088,333
Ensembl chrNW_004936504:5,018,064...5,092,024 		JBrowse link
G Pde6b phosphodiesterase 6B ISO RGD PMID:15224133 RGD:6893540 NCBI chrNW_004936477:22,418,037...22,472,251
Ensembl chrNW_004936477:22,417,453...22,472,185 		JBrowse link
G Pde6c phosphodiesterase 6C ISO RGD PMID:15224133 RGD:6893540 NCBI chrNW_004936601:1,343,538...1,393,605
Ensembl chrNW_004936601:1,341,658...1,393,377 		JBrowse link
G Pde6g phosphodiesterase 6G ISO RGD PMID:15224133 RGD:6893540 NCBI chrNW_004936594:5,263,345...5,267,240
Ensembl chrNW_004936594:5,263,333...5,267,476 		JBrowse link
G Pde6h phosphodiesterase 6H ISO RGD PMID:15224133 RGD:6893540 NCBI chrNW_004936587:2,505,755...2,514,103
Ensembl chrNW_004936587:2,506,585...2,514,157 		JBrowse link
G Rcvrn recoverin ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936595:2,873,739...2,882,150
Ensembl chrNW_004936595:2,871,630...2,882,557 		JBrowse link
G Rgs9 regulator of G protein signaling 9 ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936541:7,472,195...7,525,220
Ensembl chrNW_004936541:7,458,539...7,525,220 		JBrowse link
G Rgs9bp regulator of G protein signaling 9 binding protein ISO RGD PMID:22074925 RGD:6893539 NCBI chrNW_004936570:3,042,233...3,043,884
Ensembl chrNW_004936570:3,042,773...3,043,480 		JBrowse link
G Rho rhodopsin ISO RGD PMID:21704730 RGD:6893536 NCBI chrNW_004936602:896,730...901,480
Ensembl chrNW_004936602:894,617...901,664 		JBrowse link
G Sag S-antigen visual arrestin ISO RGD PMID:21824527 PMID:22074925 RGD:6893539 RGD:6893556 NCBI chrNW_004936525:3,932,118...3,965,651
Ensembl chrNW_004936525:3,931,933...3,964,834 		JBrowse link
G Slc24a1 solute carrier family 24 member 1 ISO RGD PMID:18690016 RGD:6893550 NCBI chrNW_004936471:25,872,854...25,909,102
Ensembl chrNW_004936471:25,872,423...25,908,158 		JBrowse link
G Slc24a2 solute carrier family 24 member 2 ISO RGD PMID:18690016 RGD:6893550 NCBI chrNW_004936652:1,375,292...1,585,718
Ensembl chrNW_004936652:1,378,045...1,583,403 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 3945
    regulatory pathway 2439
      homeostasis pathway 1275
        organic chemical homeostasis pathway 353
          S-adenosylmethionine homeostasis pathway + 262
          vitamin homeostasis + 92
paths to the root