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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:NXF1-NXT1 export pathway
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Accession:PW:0001625 term browser browse the term
Definition:The NXF1-NXT export pathway is involved in the trafficking of bulk mRNA. It is dependent upon the TREX/THO complex for receptor recruitment to the cargo.


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NXF1-NXT1 export pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alyref Aly/REF export factor ISO RGD PMID:22178508 RGD:9743960 NCBI chr10:105,871,424...105,875,076
Ensembl chr10:105,871,306...105,875,069 		JBrowse link
G Ddx19b DEAD-box helicase 19B ISO RGD PMID:23583578 RGD:9743967 NCBI chr19:38,968,215...38,998,907
Ensembl chr19:38,968,215...38,997,259 		JBrowse link
G Ddx39b DExD-box helicase 39B ISO RGD PMID:22178508 RGD:9743960 NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996 		JBrowse link
G Gle1 GLE1 RNA export mediator ISO RGD PMID:23583578 RGD:9743967 NCBI chr 3:13,209,312...13,237,018
Ensembl chr 3:13,209,322...13,237,379 		JBrowse link
G Nup214 nucleoporin 214 ISO RGD PMID:23583578 RGD:9743967 NCBI chr 3:15,255,111...15,340,568
Ensembl chr 3:15,255,119...15,340,568 		JBrowse link
G Nxf1 nuclear RNA export factor 1 ISO RGD PMID:23583578 RGD:9743967 NCBI chr 1:205,655,442...205,668,637
Ensembl chr 1:205,655,375...205,668,636 		JBrowse link
G Nxt1 nuclear transport factor 2-like export factor 1 ISO RGD PMID:23583578 RGD:9743967 NCBI chr 3:136,108,975...136,111,897
Ensembl chr 3:136,108,862...136,111,907 		JBrowse link
G Sarnp SAP domain containing ribonucleoprotein ISO RGD PMID:22178508 RGD:9743960 NCBI chr 7:1,251,096...1,305,335
Ensembl chr 7:1,251,098...1,305,332 		JBrowse link
G Thoc1 THO complex subunit 1 ISO RGD PMID:22178508 RGD:9743960 NCBI chr18:983,824...1,019,123
Ensembl chr18:983,824...1,019,114 		JBrowse link
G Thoc2 THO complex subunit 2 ISO RGD PMID:22178508 RGD:9743960 NCBI chr  X:120,634,966...120,749,569
Ensembl chr  X:120,634,968...120,749,513 		JBrowse link
G Thoc5 THO complex subunit 5 ISO RGD PMID:22178508 RGD:9743960 NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718 		JBrowse link
G Thoc6 THO complex subunit 6 ISO RGD PMID:22178508 RGD:9743960 NCBI chr10:12,700,051...12,705,411
Ensembl chr10:12,700,051...12,706,925 		JBrowse link
G Thoc7 THO complex subunit 7 ISO RGD PMID:22178508 RGD:9743960 NCBI chr15:11,262,362...11,277,200
Ensembl chr15:11,262,613...11,277,193 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6092
    regulatory pathway 3871
      transport pathway 470
        RNA transport pathway 152
          mRNA nuclear export pathway 37
            NXF1-NXT1 export pathway 13
paths to the root