PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: vitamin A deficiency pathway
Accession: PW:0001585
browse the term
Synonyms: exact_synonym: deficiency of vitamin A pathway; hypovitaminosis A pathway
related_synonym: SMP:00336
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ALDH1A1
aldehyde dehydrogenase 1 family member A1
ISO
SMPDB
SMP:00336
NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789
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ALDH1A2
aldehyde dehydrogenase 1 family member A2
ISO
SMPDB
SMP:00336
NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030
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AWAT1
acyl-CoA wax alcohol acyltransferase 1
ISO
SMPDB
SMP:00336
NCBI chr X:54,678,459...54,684,666
Ensembl chr X:54,622,317...54,684,231
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BCO1
beta-carotene oxygenase 1
ISO
SMPDB
SMP:00336
NCBI chr 5:70,598,743...70,637,273
Ensembl chr 5:70,599,284...70,637,017
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CPNE6
copine 6
ISO
SMPDB
SMP:00336
NCBI chr 8:4,046,532...4,058,498
Ensembl chr 8:4,046,544...4,084,744
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CYP26A1
cytochrome P450 family 26 subfamily A member 1
ISO
SMPDB
SMP:00336
NCBI chr28:7,423,955...7,432,359
Ensembl chr28:7,428,772...7,432,370
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CYP2A13
cytochrome P450 family 2 subfamily A polypeptide 13
ISO
SMPDB
SMP:00336
NCBI chr 1:112,932,246...112,938,248
Ensembl chr 1:112,931,985...112,938,350
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CYP2A7
cytochrome P450, family 2, subfamily A, polypeptide 7
ISO
SMPDB
SMP:00336
NCBI chr 1:112,900,508...112,906,745
Ensembl chr 1:112,900,403...112,907,076
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CYP2B6
cytochrome P450 2B11
ISO
SMPDB
SMP:00336
NCBI chr 1:112,817,561...112,833,294
Ensembl chr 1:112,816,502...112,833,293
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CYP3A4
cytochrome P450, family 3, subfamily A, polypeptide 4
ISO
SMPDB
SMP:00336
NCBI chr 6:9,836,685...9,869,520
Ensembl chr 6:9,777,659...9,869,352
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DGAT1
diacylglycerol O-acyltransferase 1
ISO
SMPDB
SMP:00336
NCBI chr13:37,745,395...37,761,337
Ensembl chr13:37,741,706...37,756,916
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DHRS3
dehydrogenase/reductase 3
ISO
SMPDB
SMP:00336
NCBI chr 2:83,826,361...83,865,412
Ensembl chr 2:83,826,374...83,865,426
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DHRS9
dehydrogenase/reductase 9
ISO
SMPDB
SMP:00336
NCBI chr36:13,859,935...13,881,432
Ensembl chr36:13,866,959...13,880,179
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DNAJB11
DnaJ heat shock protein family (Hsp40) member B11
ISO
SMPDB
SMP:00336
NCBI chr34:19,182,850...19,202,229
Ensembl chr34:19,182,400...19,202,238
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ERP29
endoplasmic reticulum protein 29
ISO
SMPDB
SMP:00336
NCBI chr26:9,608,352...9,616,711
Ensembl chr26:9,608,399...9,616,338
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HSP90B1
heat shock protein 90 beta family member 1
ISO
SMPDB
SMP:00336
NCBI chr15:42,456,793...42,474,122
Ensembl chr15:42,456,764...42,579,311
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HSPA5
heat shock protein family A (Hsp70) member 5
ISO
SMPDB
SMP:00336
NCBI chr 9:57,850,870...57,855,607
Ensembl chr 9:57,850,922...57,855,257
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HYOU1
hypoxia up-regulated 1
ISO
SMPDB
SMP:00336
NCBI chr 5:14,795,750...14,808,203
Ensembl chr 5:14,795,750...14,807,262
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LOC100856533
alcohol dehydrogenase E chain
ISO
SMPDB
SMP:00336
NCBI chr32:21,422,428...21,437,058
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LRAT
lecithin retinol acyltransferase
ISO
SMPDB
SMP:00336
NCBI chr15:52,399,773...52,409,590
Ensembl chr15:52,399,544...52,406,176
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PDIA2
protein disulfide isomerase family A member 2
ISO
SMPDB
SMP:00336
NCBI chr 6:40,218,566...40,221,924
Ensembl chr 6:40,218,550...40,231,402
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PDIA4
protein disulfide isomerase family A member 4
ISO
SMPDB
SMP:00336
NCBI chr16:1,797,537...1,818,877
Ensembl chr16:1,797,552...1,818,251
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PDIA6
protein disulfide isomerase family A member 6
ISO
SMPDB
SMP:00336
NCBI chr17:7,653,834...7,674,136
Ensembl chr17:7,654,175...7,685,999
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PNPLA4
patatin like phospholipase domain containing 4
ISO
SMPDB
SMP:00336
NCBI chr X:4,775,702...4,925,027
Ensembl chr X:4,874,240...4,924,976
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PPIB
peptidylprolyl isomerase B
ISO
SMPDB
SMP:00336
NCBI chr30:28,654,193...28,660,129
Ensembl chr30:28,654,200...28,788,801
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RDH11
retinol dehydrogenase 11
ISO
SMPDB
SMP:00336
NCBI chr 8:41,651,970...41,669,661
Ensembl chr 8:41,614,921...41,669,576
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RDH12
retinol dehydrogenase 12
ISO
SMPDB
SMP:00336
NCBI chr 8:41,685,045...41,696,120
Ensembl chr 8:41,684,996...41,695,447
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RDH16
retinol dehydrogenase 16
ISO
SMPDB
SMP:00336
NCBI chr10:1,124,322...1,134,138
Ensembl chr10:1,124,320...1,130,453
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RDH8
retinol dehydrogenase 8
ISO
SMPDB
SMP:00336
NCBI chr20:51,029,633...51,035,910
Ensembl chr20:51,029,609...51,035,951
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RETSAT
retinol saturase
ISO
SMPDB
SMP:00336
NCBI chr17:39,668,185...39,682,166
Ensembl chr17:39,668,256...39,680,560
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RPE65
retinoid isomerohydrolase RPE65
ISO
SMPDB
SMP:00336
NCBI chr 6:76,887,399...76,911,133
Ensembl chr 6:76,887,399...76,911,131
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SDF2L1
stromal cell derived factor 2 like 1
ISO
SMPDB
SMP:00336
NCBI chr26:30,918,788...30,920,873
Ensembl chr26:30,918,811...30,920,868
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all