PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: lncRNA maturation pathway
Accession: PW:0001580
browse the term
Definition: Long non-coding RNA transcripts are subject to processing in a manner analogous to mRNA thereby they are capped and polyadenylated, and also frequently spliced.
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Aar2
AAR2 splicing factor homolog
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chr 2:156,389,496...156,410,892
Ensembl chr 2:156,389,504...156,410,892
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Acin1
apoptotic chromatin condensation inducer 1
IEA
KEGG
mmu:03040
NCBI chr14:54,879,618...54,924,422
Ensembl chr14:54,879,618...54,924,388
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Alyreffm10
Aly/REF export factor family member 10
IEA
KEGG
mmu:03040
NCBI chr10:104,029,903...104,032,383
Ensembl chr10:104,029,903...104,032,383
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Alyreffm2
Aly/REF export factor family member 2
IEA
KEGG
mmu:03040
NCBI chr 1:31,326,164...31,327,132
Ensembl chr 1:31,326,026...31,326,787
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Aqr
aquarius
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr 2:113,931,642...114,005,788
Ensembl chr 2:113,931,651...114,017,505
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Bcas2
BCAS2 pre-mRNA processing factor
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr 3:103,078,971...103,086,479
Ensembl chr 3:103,078,971...103,086,482
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Bud31
BUD31 homolog
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr 5:145,077,186...145,084,888
Ensembl chr 5:145,077,172...145,084,888
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Ccdc12
coiled-coil domain containing 12
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr 9:110,483,376...110,540,661
Ensembl chr 9:110,485,571...110,540,674
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Cdc40
cell division cycle 40
IEA
KEGG
mmu:03040
NCBI chr10:40,707,617...40,759,139
Ensembl chr10:40,707,617...40,759,307
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Cdc5l
cell division cycle 5-like
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr17:45,702,809...45,744,633
Ensembl chr17:45,702,810...45,744,663
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Cherp
calcium homeostasis endoplasmic reticulum protein
IEA
KEGG
mmu:03040
NCBI chr 8:73,214,327...73,229,077
Ensembl chr 8:73,214,333...73,229,070
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Crnkl1
crooked neck pre-mRNA splicing factor 1
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr 2:145,759,402...145,776,620
Ensembl chr 2:145,759,399...145,776,934
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Ctnnbl1
catenin, beta like 1
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr 2:157,579,321...157,733,823
Ensembl chr 2:157,579,321...157,733,534
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Cwc15
CWC15 spliceosome-associated protein
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr 9:14,411,876...14,421,920
Ensembl chr 9:14,411,913...14,421,873
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Ddx23
DEAD box helicase 23
IEA ISO
KEGG RGD
PMID:23454554 PMID:19239890
mmu:03040, RGD:9686093 , RGD:9686089
NCBI chr15:98,543,012...98,560,808
Ensembl chr15:98,543,015...98,560,775
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Ddx39b
DEAD box helicase 39b
IEA ISO
KEGG RGD
PMID:23454554
mmu:03040, RGD:9686093
NCBI chr17:35,460,722...35,472,683
Ensembl chr17:35,460,722...35,472,683
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Ddx42
DEAD box helicase 42
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr11:106,107,715...106,139,966
Ensembl chr11:106,107,752...106,139,965
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Ddx46
DEAD box helicase 46
IEA ISO
KEGG RGD
PMID:23454554
mmu:03040, RGD:9686093
NCBI chr13:55,782,790...55,829,080
Ensembl chr13:55,782,841...55,829,069
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Ddx5
DEAD box helicase 5
IEA
KEGG
mmu:03040
NCBI chr11:106,671,181...106,680,011
Ensembl chr11:106,671,181...106,680,011
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Dhx15
DEAH-box helicase 15
IEA ISO
KEGG RGD
PMID:23454554
mmu:03040, RGD:9686093
NCBI chr 5:52,307,545...52,347,888
Ensembl chr 5:52,307,545...52,347,856
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Dhx16
DEAH-box helicase 16
IEA ISO
KEGG RGD
PMID:23454554
mmu:03040, RGD:9686093
NCBI chr17:36,190,657...36,203,562
Ensembl chr17:36,190,711...36,203,562
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Dhx38
DEAH-box helicase 38
IEA ISO
KEGG RGD
PMID:23454554
mmu:03040, RGD:9686093
NCBI chr 8:110,274,631...110,292,493
Ensembl chr 8:110,274,643...110,292,493
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Dhx8
DEAH-box helicase 8
IEA ISO
KEGG RGD
PMID:23454554
mmu:03040, RGD:9686093
NCBI chr11:101,623,782...101,658,184
Ensembl chr11:101,623,745...101,658,184
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Eftud2
elongation factor Tu GTP binding domain containing 2
IEA ISO
KEGG RGD
PMID:23592432 PMID:23454554
mmu:03040, RGD:9686090 , RGD:9686093
NCBI chr11:102,729,298...102,771,999
Ensembl chr11:102,729,299...102,771,811
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Eif4a3
eukaryotic translation initiation factor 4A3
IEA ISO
KEGG RGD
PMID:15145352
mmu:03040, RGD:9686404
NCBI chr11:119,179,189...119,190,869
Ensembl chr11:119,179,189...119,190,915
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Eif4a3l1
eukaryotic translation initiation factor 4A3 like 1
IEA
KEGG
mmu:03040
NCBI chr 6:136,304,537...136,306,981
Ensembl chr 6:136,304,537...136,306,981
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Gm10146
predicted gene 10146
IEA
KEGG
mmu:03040
NCBI chr10:78,229,138...78,229,590
Ensembl chr10:78,229,154...78,229,462
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Gm11847
predicted gene 11847
IEA
KEGG
mmu:03040
NCBI chr 4:12,232,772...12,238,024
Ensembl chr 4:12,232,833...12,233,951
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Gm12183
predicted gene 12183
IEA
KEGG
mmu:03040
NCBI chr11:48,642,436...48,644,703
Ensembl chr11:48,642,694...48,644,541
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Gm12966
predicted gene 12966
IEA
KEGG
mmu:03040
NCBI chr 4:129,792,742...129,794,228
Ensembl chr 4:129,792,886...129,793,695
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Gm5576
predicted pseudogene 5576
IEA
KEGG
mmu:03040
NCBI chr 6:78,192,861...78,194,152
Ensembl chr 6:78,192,861...78,194,096
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Gm5616
predicted gene 5616
IEA
KEGG
mmu:03040
NCBI chr 9:48,361,591...48,362,846
Ensembl chr 9:48,361,700...48,362,083
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Gm8186
predicted gene 8186
IEA
KEGG
mmu:03040
NCBI chr17:26,317,846...26,318,231
Ensembl chr17:26,317,965...26,318,195
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Hnrnpa0
heterogeneous nuclear ribonucleoprotein A0
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr13:58,273,693...58,276,370
Ensembl chr13:58,273,693...58,276,370
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Hnrnpa1
heterogeneous nuclear ribonucleoprotein A1
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr15:103,148,840...103,155,119
Ensembl chr15:103,148,859...103,155,119
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Hnrnpa1l2-ps2
heterogeneous nuclear ribonucleoprotein A1-like 2, pseudogene 2
IEA
KEGG
mmu:03040
NCBI chr15:22,713,906...22,715,070
Ensembl chr15:22,713,954...22,714,916
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Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 6:51,437,414...51,448,054
Ensembl chr 6:51,437,912...51,446,874
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Hnrnpa3
heterogeneous nuclear ribonucleoprotein A3
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 2:75,489,416...75,499,751
Ensembl chr 2:75,489,605...75,499,751
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Hnrnpab
heterogeneous nuclear ribonucleoprotein A/B
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr11:51,490,927...51,497,708
Ensembl chr11:51,490,927...51,497,674
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Hnrnpc
heterogeneous nuclear ribonucleoprotein C
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr14:52,310,834...52,341,462
Ensembl chr14:52,310,834...52,341,485
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Hnrnpd
heterogeneous nuclear ribonucleoprotein D
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 5:100,103,794...100,126,926
Ensembl chr 5:100,103,794...100,126,797
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Hnrnph1
heterogeneous nuclear ribonucleoprotein H1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr11:50,266,084...50,277,355
Ensembl chr11:50,267,817...50,277,355
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Hnrnph3
heterogeneous nuclear ribonucleoprotein H3
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr10:62,850,443...62,859,764
Ensembl chr10:62,850,443...62,859,996
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Hnrnpk
heterogeneous nuclear ribonucleoprotein K
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr13:58,538,946...58,551,157
Ensembl chr13:58,538,956...58,551,157
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Hnrnpl
heterogeneous nuclear ribonucleoprotein L
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 7:28,507,971...28,521,693
Ensembl chr 7:28,507,966...28,521,691
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Hnrnpm
heterogeneous nuclear ribonucleoprotein M
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr17:33,865,207...33,904,432
Ensembl chr17:33,865,207...33,905,834
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Hnrnpr
heterogeneous nuclear ribonucleoprotein R
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 4:136,038,230...136,086,758
Ensembl chr 4:136,038,253...136,086,758
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Hnrnpu
heterogeneous nuclear ribonucleoprotein U
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 1:178,148,673...178,170,063
Ensembl chr 1:178,148,673...178,165,362
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Hspa1a
heat shock protein 1A
IEA
KEGG
mmu:03040
NCBI chr17:35,188,335...35,191,132
Ensembl chr17:35,188,166...35,191,132
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Hspa1b
heat shock protein 1B
IEA
KEGG
mmu:03040
NCBI chr17:35,175,405...35,178,214
Ensembl chr17:35,175,412...35,178,214
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Hspa1l
heat shock protein 1-like
IEA
KEGG
mmu:03040
NCBI chr17:35,191,679...35,198,204
Ensembl chr17:35,191,679...35,198,261
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Hspa2
heat shock protein 2
IEA
KEGG
mmu:03040
NCBI chr12:76,450,688...76,453,712
Ensembl chr12:76,450,950...76,453,712
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Hspa8
heat shock protein 8
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr 9:40,712,572...40,716,498
Ensembl chr 9:40,712,280...40,721,383
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Isy1
ISY1 splicing factor homolog
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr 6:87,795,429...87,815,723
Ensembl chr 6:87,791,251...87,815,780
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Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr17:35,200,830...35,204,867
Ensembl chr17:35,200,838...35,204,867
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Lsm3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 6:91,493,017...91,499,602
Ensembl chr 6:91,492,910...91,499,607
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Lsm4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 8:71,124,663...71,131,402
Ensembl chr 8:71,125,898...71,131,402
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Lsm5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 6:56,678,048...56,681,684
Ensembl chr 6:56,678,048...56,681,695
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Lsm6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 8:79,531,497...79,547,781
Ensembl chr 8:79,531,494...79,547,769
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Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr10:80,688,659...80,691,043
Ensembl chr10:80,688,655...80,691,043
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Lsm8
LSM8 homolog, U6 small nuclear RNA associated
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 6:18,848,634...18,854,051
Ensembl chr 6:18,848,578...18,855,750
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Magoh
mago homolog, exon junction complex core component
IEA
KEGG
mmu:03040
NCBI chr 4:107,736,952...107,744,621
Ensembl chr 4:107,736,952...107,744,621
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Magohb
mago homolog B, exon junction complex core component
IEA ISO
KEGG RGD
PMID:15145352
mmu:03040, RGD:9686404
NCBI chr 6:131,261,351...131,270,207
Ensembl chr 6:131,261,351...131,270,207
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Mbnl1
muscleblind like splicing regulator 1
ISO
RGD
PMID:23498935
RGD:9686382
NCBI chr 3:60,380,209...60,537,171
Ensembl chr 3:60,380,251...60,537,171
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Ncbp2
nuclear cap binding protein subunit 2
IEA
KEGG
mmu:03040
NCBI chr16:31,767,364...31,777,290
Ensembl chr16:31,767,331...31,780,599
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Pcbp1
poly(rC) binding protein 1
IEA
KEGG
mmu:03040
NCBI chr 6:86,501,462...86,503,171
Ensembl chr 6:86,501,474...86,503,303
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Phf5a
PHD finger protein 5A
IEA
KEGG
mmu:03040
NCBI chr15:81,748,717...81,756,093
Ensembl chr15:81,748,721...81,756,112
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Plrg1
pleiotropic regulator 1
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr 3:82,962,845...82,979,598
Ensembl chr 3:82,962,829...82,979,662
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Pnn
pinin
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chr12:59,113,705...59,120,803
Ensembl chr12:59,113,670...59,120,784
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Ppie
peptidylprolyl isomerase E (cyclophilin E)
IEA ISO
KEGG RGD
PMID:23742842 PMID:18544344
mmu:03040, RGD:9686094 , RGD:9686376
NCBI chr 4:123,020,907...123,033,783
Ensembl chr 4:123,020,908...123,033,744
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Ppig
peptidyl-prolyl isomerase G (cyclophilin G)
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chr 2:69,553,152...69,584,356
Ensembl chr 2:69,552,889...69,584,356
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Ppih
peptidyl prolyl isomerase H
IEA ISO
KEGG RGD
PMID:18544344
mmu:03040, RGD:9686376
NCBI chr 4:119,157,207...119,177,720
Ensembl chr 4:119,157,207...119,177,743
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Ppil1
peptidylprolyl isomerase (cyclophilin)-like 1
IEA ISO
KEGG RGD
PMID:23742842 PMID:18544344
mmu:03040, RGD:9686094 , RGD:9686376
NCBI chr17:29,469,809...29,482,945
Ensembl chr17:29,469,777...29,483,160
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Ppil2
peptidylprolyl isomerase (cyclophilin)-like 2
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chr16:16,904,419...16,929,126
Ensembl chr16:16,904,419...16,929,121
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Ppil3
peptidylprolyl isomerase (cyclophilin)-like 3
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chr 1:58,470,152...58,484,878
Ensembl chr 1:58,470,153...58,484,645
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Pqbp1
polyglutamine binding protein 1
IEA
KEGG
mmu:03040
NCBI chr X:7,760,759...7,765,469
Ensembl chr X:7,760,758...7,765,508
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Prpf18
pre-mRNA processing factor 18
IEA ISO
KEGG RGD
PMID:24452469
mmu:03040, RGD:9686092
NCBI chr 2:4,626,869...4,656,946
Ensembl chr 2:4,626,869...4,656,924
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Prpf19
pre-mRNA processing factor 19
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr19:10,872,595...10,886,923
Ensembl chr19:10,872,595...10,886,923
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Prpf3
pre-mRNA processing factor 3
IEA ISO
KEGG RGD
PMID:19239890
mmu:03040, RGD:9686089
NCBI chr 3:95,737,436...95,763,197
Ensembl chr 3:95,737,436...95,763,197
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Prpf31
pre-mRNA processing factor 31
IEA ISO
KEGG RGD
PMID:19239890
mmu:03040, RGD:9686089
NCBI chr 7:3,632,984...3,645,484
Ensembl chr 7:3,632,984...3,645,485
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Prpf38a
PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
IEA
KEGG
mmu:03040
NCBI chr 4:108,422,064...108,436,533
Ensembl chr 4:108,420,369...108,436,533
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Prpf38b
PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
IEA
KEGG
mmu:03040
NCBI chr 3:108,810,121...108,819,055
Ensembl chr 3:108,810,121...108,819,043
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Prpf4
pre-mRNA processing factor 4
IEA ISO
KEGG RGD
PMID:19239890
mmu:03040, RGD:9686089
NCBI chr 4:62,327,002...62,345,227
Ensembl chr 4:62,327,034...62,345,227
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Prpf40a
pre-mRNA processing factor 40A
IEA
KEGG
mmu:03040
NCBI chr 2:53,024,714...53,081,450
Ensembl chr 2:53,024,716...53,081,714
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Prpf40b
pre-mRNA processing factor 40B
IEA
KEGG
mmu:03040
NCBI chr15:99,192,957...99,214,899
Ensembl chr15:99,192,968...99,214,899
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Prpf6
pre-mRNA splicing factor 6
IEA ISO
KEGG RGD
PMID:19239890
mmu:03040, RGD:9686089
NCBI chr 2:181,243,112...181,297,454
Ensembl chr 2:181,233,661...181,297,453
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Prpf8
pre-mRNA processing factor 8
IEA ISO
KEGG RGD
PMID:23592432
mmu:03040, RGD:9686090
NCBI chr11:75,377,603...75,400,273
Ensembl chr11:75,377,642...75,400,275
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Ptbp1
polypyrimidine tract binding protein 1
ISO
RGD
PMID:23385723
RGD:9686381
NCBI chr10:79,690,502...79,700,269
Ensembl chr10:79,690,261...79,700,605
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Ptbp2
polypyrimidine tract binding protein 2
ISO
RGD
PMID:23498935
RGD:9686382
NCBI chr 3:119,512,390...119,578,296
Ensembl chr 3:119,512,391...119,578,115
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Puf60
poly-U binding splicing factor 60
IEA
KEGG
mmu:03040
NCBI chr15:75,942,031...75,954,386
Ensembl chr15:75,942,031...75,952,773
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Qki
quaking, KH domain containing RNA binding
ISO
RGD
PMID:23385723
RGD:9686381
NCBI chr17:10,425,480...10,538,706
Ensembl chr17:10,421,530...10,538,783
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Rbm17
RNA binding motif protein 17
IEA
KEGG
mmu:03040
NCBI chr 2:11,590,250...11,608,061
Ensembl chr 2:11,590,248...11,608,964
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Rbm22
RNA binding motif protein 22
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr18:60,693,858...60,705,801
Ensembl chr18:60,693,808...60,705,882
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Rbm25
RNA binding motif protein 25
IEA
KEGG
mmu:03040
NCBI chr12:83,678,990...83,729,901
Ensembl chr12:83,678,010...83,729,897
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Rbm8a
RNA binding motif protein 8a
IEA ISO
KEGG RGD
PMID:15145352
mmu:03040, RGD:9686404
NCBI chr 3:96,537,244...96,541,107
Ensembl chr 3:96,537,249...96,541,107
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Rbm8a2
RNA binding motif protein 8A2
IEA
KEGG
mmu:03040
NCBI chr 1:175,805,784...175,806,509
Ensembl chr 1:175,805,343...175,806,680
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Rbmx
RNA binding motif protein, X chromosome
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr X:56,428,708...56,438,405
Ensembl chr X:56,428,890...56,438,396
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Rnps1
RNA binding protein with serine rich domain 1
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chr17:24,633,620...24,644,872
Ensembl chr17:24,633,539...24,644,875
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Sart1
squamous cell carcinoma antigen recognized by T cells 1
IEA
KEGG
mmu:03040
NCBI chr19:5,427,551...5,438,731
Ensembl chr19:5,427,551...5,438,731
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Sart3
squamous cell carcinoma antigen recognized by T cells 3
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chr 5:113,880,505...113,910,461
Ensembl chr 5:113,880,507...113,910,571
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Sf1
splicing factor 1
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chr19:6,413,952...6,428,060
Ensembl chr19:6,413,720...6,428,060
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Sf3a1
splicing factor 3a, subunit 1
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr11:4,110,354...4,132,541
Ensembl chr11:4,110,350...4,132,541
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Sf3a2
splicing factor 3a, subunit 2
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr10:80,634,569...80,640,756
Ensembl chr10:80,634,032...80,640,758
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Sf3a3
splicing factor 3a, subunit 3
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr 4:124,602,966...124,626,234
Ensembl chr 4:124,608,569...124,626,253
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Sf3b1
splicing factor 3b, subunit 1
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr 1:55,024,328...55,066,660
Ensembl chr 1:55,024,328...55,066,640
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Sf3b2
splicing factor 3b, subunit 2
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr19:5,323,949...5,345,485
Ensembl chr19:5,323,960...5,345,483
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Sf3b3
splicing factor 3b, subunit 3
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr 8:111,537,123...111,573,578
Ensembl chr 8:111,536,871...111,573,419
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Sf3b4
splicing factor 3b, subunit 4
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr 3:96,079,822...96,084,880
Ensembl chr 3:96,079,648...96,084,880
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Sf3b5
splicing factor 3b, subunit 5
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr10:12,884,194...12,884,927
Ensembl chr10:12,881,087...12,884,927
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Sf3b6
splicing factor 3B, subunit 6
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr12:4,867,608...4,877,659
Ensembl chr12:4,867,544...4,877,659
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Slu7
SLU7 splicing factor homolog (S. cerevisiae)
IEA ISO
KEGG RGD
PMID:24452469
mmu:03040, RGD:9686092
NCBI chr11:43,324,550...43,338,809
Ensembl chr11:43,324,571...43,338,808
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Smndc1
survival motor neuron domain containing 1
IEA
KEGG
mmu:03040
NCBI chr19:53,367,603...53,379,065
Ensembl chr19:53,367,821...53,379,009
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Snrnp200
small nuclear ribonucleoprotein 200 (U5)
IEA ISO
KEGG RGD
PMID:23592432 PMID:23454554
mmu:03040, RGD:9686090 , RGD:9686093
NCBI chr 2:127,050,306...127,082,373
Ensembl chr 2:127,050,306...127,082,371
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Snrnp27
small nuclear ribonucleoprotein 27 (U4/U6.U5)
IEA
KEGG
mmu:03040
NCBI chr 6:86,652,151...86,661,473
Ensembl chr 6:86,652,133...86,661,504
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Snrnp40
small nuclear ribonucleoprotein 40 (U5)
IEA
KEGG
mmu:03040
NCBI chr 4:130,253,925...130,283,826
Ensembl chr 4:130,253,925...130,283,819
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Snrnp70
small nuclear ribonucleoprotein 70 (U1)
IEA ISO
KEGG RGD
PMID:23592432
mmu:03040, RGD:9686090
NCBI chr 7:45,025,878...45,045,177
Ensembl chr 7:45,025,877...45,045,166
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Snrpa
small nuclear ribonucleoprotein polypeptide A
IEA ISO
KEGG RGD
PMID:23592432
mmu:03040, RGD:9686090
NCBI chr 7:26,886,431...26,895,696
Ensembl chr 7:26,886,430...26,895,696
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Snrpa1
small nuclear ribonucleoprotein polypeptide A'
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr 7:65,710,084...65,724,335
Ensembl chr 7:65,708,751...65,724,335
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Snrpb
small nuclear ribonucleoprotein B
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 2:130,013,560...130,031,184
Ensembl chr 2:130,013,555...130,021,323
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Snrpb2
U2 small nuclear ribonucleoprotein B
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr 2:142,904,989...142,913,972
Ensembl chr 2:142,904,959...142,914,773
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Snrpc
U1 small nuclear ribonucleoprotein C
IEA ISO
KEGG RGD
PMID:23592432
mmu:03040, RGD:9686090
NCBI chr17:28,059,002...28,070,942
Ensembl chr17:28,057,124...28,070,942
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Snrpd1
small nuclear ribonucleoprotein D1
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr18:10,617,796...10,628,230
Ensembl chr18:10,617,775...10,642,079
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Snrpd2
small nuclear ribonucleoprotein D2
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 7:18,883,370...18,886,659
Ensembl chr 7:18,883,647...18,887,467
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Snrpd3
small nuclear ribonucleoprotein D3
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr10:75,353,852...75,371,300
Ensembl chr10:75,353,385...75,373,215
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Snrpe
small nuclear ribonucleoprotein E
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 1:133,531,609...133,538,018
Ensembl chr 1:133,531,609...133,538,029
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Snrpf
small nuclear ribonucleoprotein polypeptide F
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr10:93,418,891...93,425,520
Ensembl chr10:93,418,891...93,425,568
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Snrpg
small nuclear ribonucleoprotein polypeptide G
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 6:86,348,522...86,355,884
Ensembl chr 6:86,348,286...86,356,310
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Snu13
SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5)
IEA ISO
KEGG RGD
PMID:19239890
mmu:03040, RGD:9686089
NCBI chr15:81,925,546...81,931,799
Ensembl chr15:81,924,726...81,931,799
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Snw1
SNW domain containing 1
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr12:87,496,680...87,519,069
Ensembl chr12:87,495,845...87,519,044
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Srrm1
serine/arginine repetitive matrix 1
ISO
RGD
PMID:17537823 PMID:15145352
RGD:9686091 , RGD:9686404
NCBI chr 4:135,047,795...135,080,787
Ensembl chr 4:135,047,795...135,080,632
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Srrm2
serine/arginine repetitive matrix 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr17:24,009,501...24,043,715
Ensembl chr17:24,009,506...24,043,715
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Srrm4
serine/arginine repetitive matrix 4
ISO
RGD
PMID:23498935
RGD:9686382
NCBI chr 5:116,577,331...116,729,882
Ensembl chr 5:116,577,334...116,729,876
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Srsf1
serine and arginine-rich splicing factor 1
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr11:87,937,325...87,944,583
Ensembl chr11:87,938,199...87,944,581
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Srsf10
serine and arginine-rich splicing factor 10
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 4:135,582,454...135,597,219
Ensembl chr 4:135,583,058...135,597,219
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Srsf11
serine and arginine-rich splicing factor 11
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 3:157,716,552...157,742,304
Ensembl chr 3:157,716,110...157,742,276
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Srsf12
serine and arginine-rich splicing factor 12
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 4:33,208,991...33,233,344
Ensembl chr 4:33,208,991...33,233,340
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Srsf2
serine and arginine-rich splicing factor 2
IEA ISO
KEGG RGD
PMID:17537823
mmu:03040, RGD:9686091
NCBI chr11:116,740,723...116,744,511
Ensembl chr11:116,740,727...116,743,920
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Srsf3
serine and arginine-rich splicing factor 3
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr17:29,251,634...29,262,346
Ensembl chr17:29,251,602...29,262,347
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Srsf4
serine and arginine-rich splicing factor 4
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 4:131,600,841...131,629,036
Ensembl chr 4:131,600,928...131,629,017
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Srsf5
serine and arginine-rich splicing factor 5
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr12:80,992,308...80,997,277
Ensembl chr12:80,992,278...80,997,281
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Srsf6
serine and arginine-rich splicing factor 6
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 2:162,773,428...162,779,041
Ensembl chr 2:162,773,448...162,779,041
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Srsf7
serine and arginine-rich splicing factor 7
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr17:80,507,509...80,514,734
Ensembl chr17:80,507,509...80,514,736
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Srsf9
serine and arginine-rich splicing factor 9
IEA ISO
KEGG RGD
PMID:19239890 PMID:17537823
mmu:03040, RGD:9686089 , RGD:9686091
NCBI chr 5:115,465,236...115,471,139
Ensembl chr 5:115,465,236...115,471,139
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Syf2
SYF2 homolog, RNA splicing factor (S. cerevisiae)
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr 4:134,658,291...134,664,848
Ensembl chr 4:134,658,209...134,664,859
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Syncrip
synaptotagmin binding, cytoplasmic RNA interacting protein
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 9:88,331,417...88,364,645
Ensembl chr 9:88,329,062...88,364,627
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Tcerg1
transcription elongation regulator 1 (CA150)
IEA
KEGG
mmu:03040
NCBI chr18:42,644,369...42,708,850
Ensembl chr18:42,644,552...42,708,858
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Thoc1
THO complex 1
IEA
KEGG
mmu:03040
NCBI chr18:9,958,176...9,995,486
Ensembl chr18:9,957,906...9,995,489
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Thoc2
THO complex 2
IEA
KEGG
mmu:03040
NCBI chr X:40,883,869...41,000,878
Ensembl chr X:40,883,868...41,009,551
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Thoc3
THO complex 3
IEA
KEGG
mmu:03040
NCBI chr13:54,606,650...54,616,653
Ensembl chr13:54,606,650...54,616,662
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Tial1
Tia1 cytotoxic granule-associated RNA binding protein-like 1
ISO
RGD
PMID:23385723
RGD:9686381
NCBI chr 7:128,041,496...128,063,450
Ensembl chr 7:128,041,501...128,063,441
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Tra2a
transformer 2 alpha
IEA
KEGG
mmu:03040
NCBI chr 6:49,220,855...49,241,182
Ensembl chr 6:49,220,858...49,240,967
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Tra2b
transformer 2 beta
IEA
KEGG
mmu:03040
NCBI chr16:22,063,302...22,084,755
Ensembl chr16:22,063,299...22,084,755
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Txnl4a
thioredoxin-like 4A
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chr18:80,250,041...80,269,066
Ensembl chr18:80,249,980...80,255,956 Ensembl chr18:80,249,980...80,255,956
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U2af1
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1
IEA ISO
KEGG RGD
PMID:19239890
mmu:03040, RGD:9686089
NCBI chr17:31,866,055...31,878,122
Ensembl chr17:31,866,055...31,877,866
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U2af2
U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
IEA ISO
KEGG RGD
PMID:19239890
mmu:03040, RGD:9686089
NCBI chr 7:5,063,884...5,082,937
Ensembl chr 7:5,065,142...5,082,937
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Usp39
ubiquitin specific peptidase 39
IEA
KEGG
mmu:03040
NCBI chr 6:72,295,749...72,322,190
Ensembl chr 6:72,295,661...72,322,167
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Wbp11
WW domain binding protein 11
IEA
KEGG
mmu:03040
NCBI chr 6:136,790,652...136,805,214
Ensembl chr 6:136,790,652...136,805,231
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Xab2
XPA binding protein 2
IEA ISO
KEGG RGD
PMID:23742842
mmu:03040, RGD:9686094
NCBI chr 8:3,660,089...3,671,311
Ensembl chr 8:3,658,421...3,671,316
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Zmat2
zinc finger, matrin type 2
IEA
KEGG
mmu:03040
NCBI chr18:36,926,976...36,932,713
Ensembl chr18:36,926,929...36,932,719
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