PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: lncRNA maturation pathway
Accession: PW:0001580
browse the term
Definition: Long non-coding RNA transcripts are subject to processing in a manner analogous to mRNA thereby they are capped and polyadenylated, and also frequently spliced.
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AAR2
AAR2 splicing factor
TAS
RGD
PMID:23592432
RGD:9686090
NCBI chr20:36,236,478...36,256,933
Ensembl chr20:36,236,131...36,270,918
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ACIN1
apoptotic chromatin condensation inducer 1
IEA
KEGG
hsa:03040
NCBI chr14:23,058,564...23,095,614
Ensembl chr14:23,058,564...23,095,614
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AQR
aquarius intron-binding spliceosomal factor
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr15:34,851,782...34,969,742
Ensembl chr15:34,851,782...34,969,742
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BCAS2
BCAS2 pre-mRNA processing factor
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr 1:114,567,557...114,581,615
Ensembl chr 1:114,567,557...114,581,629
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BUD31
BUD31 homolog
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr 7:99,408,969...99,419,616
Ensembl chr 7:99,408,641...99,419,616
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CCDC12
coiled-coil domain containing 12
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr 3:46,921,730...46,981,994
Ensembl chr 3:46,916,634...46,982,010
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CDC40
cell division cycle 40
IEA
KEGG
hsa:03040
NCBI chr 6:110,180,427...110,232,232
Ensembl chr 6:110,180,141...110,254,275
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CDC5L
cell division cycle 5 like
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr 6:44,387,706...44,450,425
Ensembl chr 6:44,387,706...44,450,425
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CHERP
calcium homeostasis endoplasmic reticulum protein
IEA
KEGG
hsa:03040
NCBI chr19:16,517,894...16,542,437
Ensembl chr19:16,517,894...16,542,437
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CRNKL1
crooked neck pre-mRNA splicing factor 1
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr20:20,034,368...20,056,046
Ensembl chr20:20,034,368...20,056,046
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CTNNBL1
catenin beta like 1
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr20:37,694,030...37,872,118
Ensembl chr20:37,694,030...37,872,129
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CWC15
CWC15 spliceosome associated protein homolog
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr11:94,962,620...94,973,556
Ensembl chr11:94,962,620...94,973,586
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DDX23
DEAD-box helicase 23
IEA TAS
KEGG RGD
PMID:19239890 PMID:23454554
hsa:03040, RGD:9686089 , RGD:9686093
NCBI chr12:48,829,756...48,852,163
Ensembl chr12:48,829,756...48,852,842
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DDX39B
DExD-box helicase 39B
IEA TAS
KEGG RGD
PMID:23454554
hsa:03040, RGD:9686093
NCBI chr 6:31,530,226...31,542,003
Ensembl chr 6:31,530,219...31,542,448
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DDX42
DEAD-box helicase 42
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr17:63,773,800...63,819,317
Ensembl chr17:63,773,603...63,819,317
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DDX46
DEAD-box helicase 46
IEA TAS
KEGG RGD
PMID:23454554
hsa:03040, RGD:9686093
NCBI chr 5:134,758,779...134,831,121
Ensembl chr 5:134,758,771...134,855,133
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DDX5
DEAD-box helicase 5
IEA
KEGG
hsa:03040
NCBI chr17:64,498,254...64,506,866
Ensembl chr17:64,498,254...64,508,199
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DHX15
DEAH-box helicase 15
IEA TAS
KEGG RGD
PMID:23454554
hsa:03040, RGD:9686093
NCBI chr 4:24,527,475...24,584,554
Ensembl chr 4:24,517,441...24,584,554
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DHX16
DEAH-box helicase 16
IEA TAS
KEGG RGD
PMID:23454554
hsa:03040, RGD:9686093
NCBI chr 6:30,653,127...30,673,006
Ensembl chr 6:30,653,119...30,673,006
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DHX38
DEAH-box helicase 38
IEA TAS
KEGG RGD
PMID:23454554
hsa:03040, RGD:9686093
NCBI chr16:72,093,847...72,112,912
Ensembl chr16:72,093,613...72,112,912
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DHX8
DEAH-box helicase 8
IEA TAS
KEGG RGD
PMID:23454554
hsa:03040, RGD:9686093
NCBI chr17:43,483,975...43,544,799
Ensembl chr17:43,483,865...43,610,338
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EFTUD2
elongation factor Tu GTP binding domain containing 2
IEA TAS
KEGG RGD
PMID:23454554 PMID:23592432
hsa:03040, RGD:9686093 , RGD:9686090
NCBI chr17:44,849,948...44,899,445
Ensembl chr17:44,849,948...44,899,445
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EIF4A3
eukaryotic translation initiation factor 4A3
IEA TAS
KEGG RGD
PMID:15145352
hsa:03040, RGD:9686404
NCBI chr17:80,134,369...80,147,128
Ensembl chr17:80,134,369...80,147,151
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HNRNPA0
heterogeneous nuclear ribonucleoprotein A0
TAS
RGD
PMID:17537823
RGD:9686091
NCBI chr 5:137,745,651...137,754,363
Ensembl chr 5:137,745,651...137,754,363
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HNRNPA1
heterogeneous nuclear ribonucleoprotein A1
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr12:54,280,726...54,287,087
Ensembl chr12:54,280,193...54,287,088
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HNRNPA1L2
heterogeneous nuclear ribonucleoprotein A1 like 2
IEA
KEGG
hsa:03040
NCBI chr13:52,617,525...52,643,773
Ensembl chr13:52,642,431...52,643,773
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HNRNPA2B1
heterogeneous nuclear ribonucleoprotein A2/B1
TAS
RGD
PMID:17537823
RGD:9686091
NCBI chr 7:26,189,927...26,200,746
Ensembl chr 7:26,171,151...26,201,529
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HNRNPA3
heterogeneous nuclear ribonucleoprotein A3
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 2:177,212,794...177,223,959
Ensembl chr 2:177,212,694...177,226,106
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HNRNPAB
heterogeneous nuclear ribonucleoprotein A/B
TAS
RGD
PMID:17537823
RGD:9686091
NCBI chr 5:178,204,533...178,211,163
Ensembl chr 5:178,204,533...178,211,163
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HNRNPC
heterogeneous nuclear ribonucleoprotein C
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr14:21,209,147...21,269,442
Ensembl chr14:21,209,136...21,269,494
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HNRNPD
heterogeneous nuclear ribonucleoprotein D
TAS
RGD
PMID:17537823
RGD:9686091
NCBI chr 4:82,352,498...82,373,991
Ensembl chr 4:82,352,498...82,374,503
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HNRNPH1
heterogeneous nuclear ribonucleoprotein H1
TAS
RGD
PMID:17537823
RGD:9686091
NCBI chr 5:179,614,178...179,634,784
Ensembl chr 5:179,614,178...179,634,784
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HNRNPH3
heterogeneous nuclear ribonucleoprotein H3
TAS
RGD
PMID:17537823
RGD:9686091
NCBI chr10:68,331,693...68,343,196
Ensembl chr10:68,331,174...68,343,193
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HNRNPK
heterogeneous nuclear ribonucleoprotein K
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 9:83,968,083...83,980,615
Ensembl chr 9:83,968,083...83,980,631
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HNRNPL
heterogeneous nuclear ribonucleoprotein L
TAS
RGD
PMID:17537823
RGD:9686091
NCBI chr19:38,836,370...38,852,347
Ensembl chr19:38,836,370...38,852,347
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HNRNPM
heterogeneous nuclear ribonucleoprotein M
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr19:8,444,975...8,489,114
Ensembl chr19:8,444,767...8,489,114
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HNRNPR
heterogeneous nuclear ribonucleoprotein R
TAS
RGD
PMID:17537823
RGD:9686091
NCBI chr 1:23,304,688...23,344,284
Ensembl chr 1:23,303,771...23,344,336
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HNRNPU
heterogeneous nuclear ribonucleoprotein U
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560
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HSPA1A
heat shock protein family A (Hsp70) member 1A
IEA
KEGG
hsa:03040
NCBI chr 6:31,815,543...31,817,942
Ensembl chr 6:31,815,543...31,817,946
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HSPA1B
heat shock protein family A (Hsp70) member 1B
IEA
KEGG
hsa:03040
NCBI chr 6:31,827,738...31,830,254
Ensembl chr 6:31,827,738...31,830,254
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HSPA1L
heat shock protein family A (Hsp70) member 1 like
IEA
KEGG
hsa:03040
NCBI chr 6:31,809,619...31,815,283
Ensembl chr 6:31,809,619...31,815,283
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HSPA2
heat shock protein family A (Hsp70) member 2
IEA
KEGG
hsa:03040
NCBI chr14:64,535,905...64,543,237
Ensembl chr14:64,535,905...64,546,173
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HSPA6
heat shock protein family A (Hsp70) member 6
IEA
KEGG
hsa:03040
NCBI chr 1:161,524,540...161,526,894
Ensembl chr 1:161,524,540...161,526,894
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HSPA8
heat shock protein family A (Hsp70) member 8
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr11:123,057,489...123,062,462
Ensembl chr11:123,057,489...123,063,230
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ISY1
ISY1 splicing factor homolog
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr 3:129,127,415...129,161,063
Ensembl chr 3:129,127,415...129,161,063
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LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 6:31,797,396...31,806,966
Ensembl chr 6:31,797,396...31,806,966
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LSM3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 3:14,178,817...14,201,122
Ensembl chr 3:14,178,817...14,201,122
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LSM4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr19:18,306,236...18,323,076
Ensembl chr19:18,306,236...18,323,112
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LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 7:32,485,338...32,495,283
Ensembl chr 7:32,485,338...32,495,283
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LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 4:146,175,718...146,191,535
Ensembl chr 4:146,175,703...146,200,000
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LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr19:2,321,521...2,328,586
Ensembl chr19:2,321,520...2,328,611
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LSM8
LSM8 homolog, U6 small nuclear RNA associated
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 7:118,184,164...118,204,035
Ensembl chr 7:118,184,144...118,204,035
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MAGOH
mago homolog, exon junction complex subunit
IEA
KEGG
hsa:03040
NCBI chr 1:53,226,900...53,238,518
Ensembl chr 1:53,226,900...53,238,518
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MAGOHB
mago homolog B, exon junction complex subunit
IEA TAS
KEGG RGD
PMID:15145352
hsa:03040, RGD:9686404
NCBI chr12:10,599,524...10,613,609
Ensembl chr12:10,604,190...10,613,609
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MBNL1
muscleblind like splicing regulator 1
TAS
RGD
PMID:23498935
RGD:9686382
NCBI chr 3:152,243,632...152,465,780
Ensembl chr 3:152,243,828...152,465,780
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NCBP1
nuclear cap binding protein subunit 1
IEA
KEGG
hsa:03040
NCBI chr 9:97,633,821...97,673,748
Ensembl chr 9:97,633,668...97,673,748
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NCBP2
nuclear cap binding protein subunit 2
IEA
KEGG
hsa:03040
NCBI chr 3:196,935,406...196,942,528
Ensembl chr 3:196,935,402...196,942,594
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PCBP1
poly(rC) binding protein 1
IEA
KEGG
hsa:03040
NCBI chr 2:70,087,477...70,089,203
Ensembl chr 2:70,087,477...70,089,203
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PHF5A
PHD finger protein 5A
IEA
KEGG
hsa:03040
NCBI chr22:41,459,717...41,468,692
Ensembl chr22:41,459,717...41,468,692
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PLRG1
pleiotropic regulator 1
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr 4:154,535,005...154,550,400
Ensembl chr 4:154,535,005...154,550,400
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PNN
pinin, desmosome associated protein
TAS
RGD
PMID:15145352
RGD:9686404
NCBI chr14:39,175,254...39,183,220
Ensembl chr14:39,175,183...39,183,220
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PPIE
peptidylprolyl isomerase E
IEA TAS
KEGG RGD
PMID:18544344 PMID:23742842
hsa:03040, RGD:9686376 , RGD:9686094
NCBI chr 1:39,738,882...39,763,914
Ensembl chr 1:39,692,182...39,763,914
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PPIG
peptidylprolyl isomerase G
TAS
RGD
PMID:18544344
RGD:9686376
NCBI chr 2:169,584,351...169,641,406
Ensembl chr 2:169,584,342...169,641,406
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PPIH
peptidylprolyl isomerase H
IEA TAS
KEGG RGD
PMID:18544344
hsa:03040, RGD:9686376
NCBI chr 1:42,658,423...42,681,654
Ensembl chr 1:42,658,335...42,676,758
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PPIL1
peptidylprolyl isomerase like 1
IEA TAS
KEGG RGD
PMID:18544344 PMID:23742842
hsa:03040, RGD:9686376 , RGD:9686094
NCBI chr 6:36,854,829...36,874,803
Ensembl chr 6:36,854,827...36,874,803
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PPIL2
peptidylprolyl isomerase like 2
TAS
RGD
PMID:18544344
RGD:9686376
NCBI chr22:21,666,012...21,700,015
Ensembl chr22:21,666,000...21,700,015
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PPIL3
peptidylprolyl isomerase like 3
TAS
RGD
PMID:18544344
RGD:9686376
NCBI chr 2:200,870,907...200,889,291
Ensembl chr 2:200,870,907...200,889,303
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PQBP1
polyglutamine binding protein 1
IEA
KEGG
hsa:03040
NCBI chr X:48,897,930...48,903,143
Ensembl chr X:48,890,197...48,903,402
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PRPF18
pre-mRNA processing factor 18
IEA TAS
KEGG RGD
PMID:24452469
hsa:03040, RGD:9686092
NCBI chr10:13,586,965...13,655,929
Ensembl chr10:13,586,939...13,668,445
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PRPF19
pre-mRNA processing factor 19
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr11:60,890,547...60,906,585
Ensembl chr11:60,890,547...60,906,585
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PRPF3
pre-mRNA processing factor 3
IEA TAS
KEGG RGD
PMID:19239890
hsa:03040, RGD:9686089
NCBI chr 1:150,321,468...150,353,233
Ensembl chr 1:150,321,479...150,353,233
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PRPF31
pre-mRNA processing factor 31
IEA TAS
KEGG RGD
PMID:19239890
hsa:03040, RGD:9686089
NCBI chr19:54,115,754...54,131,713
Ensembl chr19:54,115,410...54,131,719
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PRPF38A
pre-mRNA processing factor 38A
IEA
KEGG
hsa:03040
NCBI chr 1:52,404,602...52,420,836
Ensembl chr 1:52,404,602...52,420,836
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PRPF38B
pre-mRNA processing factor 38B
IEA
KEGG
hsa:03040
NCBI chr 1:108,692,310...108,702,928
Ensembl chr 1:108,692,310...108,702,928
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PRPF4
pre-mRNA splicing tri-snRNP complex factor PRPF4
IEA TAS
KEGG RGD
PMID:19239890
hsa:03040, RGD:9686089
NCBI chr 9:113,275,658...113,292,905
Ensembl chr 9:113,275,642...113,294,009
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PRPF40A
pre-mRNA processing factor 40 homolog A
IEA
KEGG
hsa:03040
NCBI chr 2:152,651,732...152,718,019
Ensembl chr 2:152,651,593...152,718,012
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PRPF40B
pre-mRNA processing factor 40 homolog B
IEA
KEGG
hsa:03040
NCBI chr12:49,622,646...49,644,665
Ensembl chr12:49,568,218...49,644,666
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PRPF6
pre-mRNA processing factor 6
IEA TAS
KEGG RGD
PMID:19239890
hsa:03040, RGD:9686089
NCBI chr20:63,981,132...64,033,100
Ensembl chr20:63,981,132...64,033,100
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PRPF8
pre-mRNA processing factor 8
IEA TAS
KEGG RGD
PMID:23592432
hsa:03040, RGD:9686090
NCBI chr17:1,650,629...1,684,867
Ensembl chr17:1,650,629...1,684,867
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PTBP1
polypyrimidine tract binding protein 1
TAS
RGD
PMID:23385723
RGD:9686381
NCBI chr19:797,452...812,312
Ensembl chr19:797,075...812,327
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PTBP2
polypyrimidine tract binding protein 2
TAS
RGD
PMID:23498935
RGD:9686382
NCBI chr 1:96,721,784...96,823,739
Ensembl chr 1:96,721,665...96,823,738
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PUF60
poly(U) binding splicing factor 60
IEA
KEGG
hsa:03040
NCBI chr 8:143,816,344...143,829,315
Ensembl chr 8:143,816,344...143,830,709
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QKI
QKI, KH domain containing RNA binding
TAS
RGD
PMID:23385723
RGD:9686381
NCBI chr 6:163,414,718...163,578,592
Ensembl chr 6:163,414,000...163,578,592
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RBM17
RNA binding motif protein 17
IEA
KEGG
hsa:03040
NCBI chr10:6,089,034...6,117,447
Ensembl chr10:6,089,034...6,117,457
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RBM22
RNA binding motif protein 22
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr 5:150,690,792...150,701,062
Ensembl chr 5:150,690,792...150,701,077
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RBM25
RNA binding motif protein 25
IEA
KEGG
hsa:03040
NCBI chr14:73,058,534...73,123,899
Ensembl chr14:73,058,532...73,123,899
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RBM8A
RNA binding motif protein 8A
IEA TAS
KEGG RGD
PMID:15145352
hsa:03040, RGD:9686404
NCBI chr 1:145,921,556...145,927,484
Ensembl chr 1:145,921,556...145,927,678
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RBMX
RNA binding motif protein X-linked
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr X:136,869,192...136,880,725
Ensembl chr X:136,848,004...136,880,764
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RBMXL1
RBMX like 1
IEA
KEGG
hsa:03040
NCBI chr 1:88,979,456...88,992,629
Ensembl chr 1:88,979,456...88,992,960
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RNPS1
RNA binding protein with serine rich domain 1
TAS
RGD
PMID:15145352
RGD:9686404
NCBI chr16:2,253,116...2,268,126
Ensembl chr16:2,253,116...2,268,397
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SART1
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP
IEA
KEGG
hsa:03040
NCBI chr11:65,961,734...65,980,137
Ensembl chr11:65,961,728...65,980,137
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SART3
spliceosome associated factor 3, U4/U6 recycling protein
TAS
RGD
PMID:23592432
RGD:9686090
NCBI chr12:108,522,214...108,561,173
Ensembl chr12:108,522,214...108,561,400
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SF1
splicing factor 1
TAS
RGD
PMID:19239890
RGD:9686089
NCBI chr11:64,764,606...64,778,542
Ensembl chr11:64,764,606...64,778,786
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SF3A1
splicing factor 3a subunit 1
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr22:30,331,988...30,356,894
Ensembl chr22:30,331,988...30,356,919
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SF3A2
splicing factor 3a subunit 2
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr19:2,236,824...2,248,655
Ensembl chr19:2,236,824...2,248,655
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SF3A3
splicing factor 3a subunit 3
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr 1:37,956,975...37,990,022
Ensembl chr 1:37,956,975...37,990,075
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SF3B1
splicing factor 3b subunit 1
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr 2:197,389,784...197,435,093
Ensembl chr 2:197,388,515...197,435,079
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SF3B2
splicing factor 3b subunit 2
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr11:66,052,364...66,069,308
Ensembl chr11:66,050,729...66,069,308
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SF3B3
splicing factor 3b subunit 3
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr16:70,523,816...70,577,668
Ensembl chr16:70,523,791...70,577,670
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SF3B4
splicing factor 3b subunit 4
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr 1:149,923,317...149,927,803
Ensembl chr 1:149,923,317...149,927,803
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SF3B5
splicing factor 3b subunit 5
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr 6:144,094,884...144,095,573
Ensembl chr 6:144,094,884...144,095,573
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SF3B6
splicing factor 3b subunit 6
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr 2:24,067,586...24,076,326
Ensembl chr 2:24,067,586...24,076,373
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SLU7
SLU7 homolog, splicing factor
IEA TAS
KEGG RGD
PMID:24452469
hsa:03040, RGD:9686092
NCBI chr 5:160,401,641...160,419,081
Ensembl chr 5:160,401,641...160,421,711
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SMNDC1
survival motor neuron domain containing 1
IEA
KEGG
hsa:03040
NCBI chr10:110,290,730...110,304,920
Ensembl chr10:110,290,730...110,304,938
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SNRNP200
small nuclear ribonucleoprotein U5 subunit 200
IEA TAS
KEGG RGD
PMID:23454554 PMID:23592432
hsa:03040, RGD:9686093 , RGD:9686090
NCBI chr 2:96,274,338...96,305,546
Ensembl chr 2:96,274,338...96,321,271
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SNRNP27
small nuclear ribonucleoprotein U4/U6.U5 subunit 27
IEA
KEGG
hsa:03040
NCBI chr 2:69,893,956...69,905,236
Ensembl chr 2:69,893,956...69,905,575
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SNRNP40
small nuclear ribonucleoprotein U5 subunit 40
IEA
KEGG
hsa:03040
NCBI chr 1:31,259,568...31,296,788
Ensembl chr 1:31,259,568...31,296,788
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SNRNP70
small nuclear ribonucleoprotein U1 subunit 70
IEA TAS
KEGG RGD
PMID:23592432
hsa:03040, RGD:9686090
NCBI chr19:49,085,451...49,108,604
Ensembl chr19:49,085,419...49,108,605
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SNRPA
small nuclear ribonucleoprotein polypeptide A
IEA TAS
KEGG RGD
PMID:23592432
hsa:03040, RGD:9686090
NCBI chr19:40,751,203...40,765,389
Ensembl chr19:40,750,637...40,765,389
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SNRPA1
small nuclear ribonucleoprotein polypeptide A'
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr15:101,281,510...101,295,248
Ensembl chr15:101,281,510...101,295,282
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SNRPB
small nuclear ribonucleoprotein polypeptides B and B1
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr20:2,461,642...2,470,789
Ensembl chr20:2,461,634...2,470,853
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SNRPB2
small nuclear ribonucleoprotein polypeptide B2
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr20:16,730,026...16,742,564
Ensembl chr20:16,729,961...16,742,564
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SNRPC
small nuclear ribonucleoprotein polypeptide C
IEA TAS
KEGG RGD
PMID:23592432
hsa:03040, RGD:9686090
NCBI chr 6:34,757,505...34,773,857
Ensembl chr 6:34,757,505...34,773,857
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SNRPD1
small nuclear ribonucleoprotein D1 polypeptide
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr18:21,612,314...21,633,520
Ensembl chr18:21,612,314...21,633,524
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SNRPD2
small nuclear ribonucleoprotein D2 polypeptide
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr19:45,687,454...45,692,316
Ensembl chr19:45,687,460...45,692,569
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SNRPD3
small nuclear ribonucleoprotein D3 polypeptide
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr22:24,555,650...24,574,971
Ensembl chr22:24,555,958...24,582,052
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SNRPE
small nuclear ribonucleoprotein polypeptide E
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 1:203,861,599...203,871,152
Ensembl chr 1:203,861,599...203,871,152
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SNRPF
small nuclear ribonucleoprotein polypeptide F
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr12:95,858,952...95,866,140
Ensembl chr12:95,858,952...95,903,828
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SNRPG
small nuclear ribonucleoprotein polypeptide G
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 2:70,281,362...70,293,740
Ensembl chr 2:70,281,362...70,293,740
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SNU13
small nuclear ribonucleoprotein 13
IEA TAS
KEGG RGD
PMID:19239890
hsa:03040, RGD:9686089
NCBI chr22:41,673,933...41,690,480
Ensembl chr22:41,673,933...41,690,504
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SNW1
SNW domain containing 1
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr14:77,717,599...77,761,156
Ensembl chr14:77,717,599...77,761,207
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SRRM1
serine and arginine repetitive matrix 1
TAS
RGD
PMID:17537823 PMID:15145352
RGD:9686091 , RGD:9686404
NCBI chr 1:24,643,302...24,673,281
Ensembl chr 1:24,631,716...24,673,281
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SRRM2
serine/arginine repetitive matrix 2
TAS
RGD
PMID:17537823
RGD:9686091
NCBI chr16:2,752,638...2,771,412
Ensembl chr16:2,752,626...2,772,538
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SRRM4
serine/arginine repetitive matrix 4
TAS
RGD
PMID:23498935
RGD:9686382
NCBI chr12:118,981,541...119,163,051
Ensembl chr12:118,981,541...119,163,051
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SRSF1
serine and arginine rich splicing factor 1
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr17:57,989,038...58,007,246
Ensembl chr17:58,000,919...58,007,346
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SRSF10
serine and arginine rich splicing factor 10
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 1:23,964,347...23,980,327
Ensembl chr 1:23,964,347...23,980,927
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SRSF11
serine and arginine rich splicing factor 11
TAS
RGD
PMID:17537823
RGD:9686091
NCBI chr 1:70,205,696...70,253,052
Ensembl chr 1:70,205,682...70,253,052
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SRSF12
serine and arginine rich splicing factor 12
TAS
RGD
PMID:17537823
RGD:9686091
NCBI chr 6:89,095,959...89,118,071
Ensembl chr 6:89,093,949...89,118,071
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SRSF2
serine and arginine rich splicing factor 2
IEA TAS
KEGG RGD
PMID:17537823
hsa:03040, RGD:9686091
NCBI chr17:76,734,115...76,737,411
Ensembl chr17:76,734,115...76,737,333
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SRSF3
serine and arginine rich splicing factor 3
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 6:36,594,362...36,605,600
Ensembl chr 6:36,594,353...36,605,911
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SRSF4
serine and arginine rich splicing factor 4
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 1:29,147,743...29,181,900
Ensembl chr 1:29,147,743...29,181,900
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SRSF5
serine and arginine rich splicing factor 5
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr14:69,767,142...69,772,005
Ensembl chr14:69,726,900...69,772,005
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SRSF6
serine and arginine rich splicing factor 6
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr20:43,457,896...43,464,243
Ensembl chr20:43,457,893...43,466,046
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SRSF7
serine and arginine rich splicing factor 7
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr 2:38,743,599...38,751,494
Ensembl chr 2:38,743,599...38,751,494
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SRSF8
serine and arginine rich splicing factor 8
IEA
KEGG
hsa:03040
NCBI chr11:95,066,877...95,071,225
Ensembl chr11:95,066,919...95,071,225
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SRSF9
serine and arginine rich splicing factor 9
IEA TAS
KEGG RGD
PMID:17537823 PMID:19239890
hsa:03040, RGD:9686091 , RGD:9686089
NCBI chr12:120,461,672...120,469,748
Ensembl chr12:120,461,672...120,495,946
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SYF2
SYF2 pre-mRNA splicing factor
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr 1:25,222,276...25,232,502
Ensembl chr 1:25,222,276...25,232,502
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SYNCRIP
synaptotagmin binding cytoplasmic RNA interacting protein
TAS
RGD
PMID:17537823
RGD:9686091
NCBI chr 6:85,607,784...85,643,870
Ensembl chr 6:85,607,779...85,644,063
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TCERG1
transcription elongation regulator 1
IEA
KEGG
hsa:03040
NCBI chr 5:146,447,330...146,511,961
Ensembl chr 5:146,447,311...146,511,961
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THOC1
THO complex subunit 1
IEA
KEGG
hsa:03040
NCBI chr18:214,520...268,047
Ensembl chr18:214,520...268,050
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THOC2
THO complex subunit 2
IEA
KEGG
hsa:03040
NCBI chr X:123,600,569...123,733,052
Ensembl chr X:123,600,561...123,733,056
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THOC3
THO complex subunit 3
IEA
KEGG
hsa:03040
NCBI chr 5:175,959,531...175,968,315
Ensembl chr 5:175,917,873...176,034,680
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TIAL1
TIA1 cytotoxic granule associated RNA binding protein like 1
TAS
RGD
PMID:23385723
RGD:9686381
NCBI chr10:119,573,465...119,596,964
Ensembl chr10:119,571,802...119,597,029
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TRA2A
transformer 2 alpha homolog
IEA
KEGG
hsa:03040
NCBI chr 7:23,504,780...23,531,981
Ensembl chr 7:23,504,780...23,532,041
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TRA2B
transformer 2 beta homolog
IEA
KEGG
hsa:03040
NCBI chr 3:185,914,558...185,938,014
Ensembl chr 3:185,914,558...185,938,103
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TXNL4A
thioredoxin like 4A
IEA TAS
KEGG RGD
PMID:19239890
hsa:03040, RGD:9686089
NCBI chr18:79,970,813...80,033,936
Ensembl chr18:79,970,813...80,033,949
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U2AF1
U2 small nuclear RNA auxiliary factor 1
IEA TAS
KEGG RGD
PMID:19239890
hsa:03040, RGD:9686089
NCBI chr21:43,092,956...43,107,578
Ensembl chr21:43,092,956...43,107,570
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U2AF2
U2 small nuclear RNA auxiliary factor 2
IEA TAS
KEGG RGD
PMID:19239890
hsa:03040, RGD:9686089
NCBI chr19:55,655,035...55,674,716
Ensembl chr19:55,654,146...55,674,716
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U2SURP
U2 snRNP associated SURP domain containing
IEA
KEGG
hsa:03040
NCBI chr 3:143,001,570...143,060,725
Ensembl chr 3:142,964,497...143,060,725
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USP39
ubiquitin specific peptidase 39
IEA
KEGG
hsa:03040
NCBI chr 2:85,602,861...85,649,283
Ensembl chr 2:85,602,856...85,649,283
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WBP11
WW domain binding protein 11
IEA
KEGG
hsa:03040
NCBI chr12:14,784,582...14,803,478
Ensembl chr12:14,784,582...14,803,486
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XAB2
XPA binding protein 2
IEA TAS
KEGG RGD
PMID:23742842
hsa:03040, RGD:9686094
NCBI chr19:7,619,525...7,629,545
Ensembl chr19:7,619,525...7,629,545
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ZMAT2
zinc finger matrin-type 2
IEA
KEGG
hsa:03040
NCBI chr 5:140,700,447...140,706,686
Ensembl chr 5:140,698,680...140,706,686
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