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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:lncRNA maturation pathway
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Accession:PW:0001580 term browser browse the term
Definition:Long non-coding RNA transcripts are subject to processing in a manner analogous to mRNA thereby they are capped and polyadenylated, and also frequently spliced.



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spliceosome pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AAR2 AAR2 splicing factor ISO RGD PMID:23592432 RGD:9686090 NCBI chr24:25,053,200...25,070,646
Ensembl chr24:25,053,034...25,082,347
JBrowse link
G AQR aquarius intron-binding spliceosomal factor ISO RGD PMID:23742842 RGD:9686094 NCBI chr30:2,571,359...2,670,715
Ensembl chr30:2,571,554...2,670,597
JBrowse link
G BCAS2 BCAS2 pre-mRNA processing factor ISO RGD PMID:23742842 RGD:9686094 NCBI chr17:52,277,677...52,291,150
Ensembl chr17:52,277,804...52,291,022
JBrowse link
G BUD31 BUD31 homolog ISO RGD PMID:23742842 RGD:9686094 NCBI chr 6:10,169,422...10,178,231 JBrowse link
G CCDC12 coiled-coil domain containing 12 ISO RGD PMID:23742842 RGD:9686094 NCBI chr20:41,838,497...41,889,902
Ensembl chr20:41,834,095...41,890,482
JBrowse link
G CDC5L cell division cycle 5 like ISO RGD PMID:23742842 RGD:9686094 NCBI chr12:12,779,936...12,822,978
Ensembl chr12:12,780,010...12,822,801
JBrowse link
G CRNKL1 crooked neck pre-mRNA splicing factor 1 ISO RGD PMID:23742842 RGD:9686094 NCBI chr24:3,294,607...3,310,846
Ensembl chr24:3,294,616...3,310,702
JBrowse link
G CTNNBL1 catenin beta like 1 ISO RGD PMID:23742842 RGD:9686094 NCBI chr24:26,253,884...26,415,166
Ensembl chr24:26,253,962...26,415,163
JBrowse link
G CWC15 CWC15 spliceosome associated protein homolog ISO RGD PMID:23742842 RGD:9686094 NCBI chr21:6,037,305...6,049,124
Ensembl chr21:6,038,656...6,048,400
JBrowse link
G DDX23 DEAD-box helicase 23 ISO RGD PMID:19239890 PMID:23454554 RGD:9686089 RGD:9686093 NCBI chr27:5,690,452...5,704,762
Ensembl chr27:5,693,931...5,704,778
JBrowse link
G DDX39B DExD-box helicase 39B ISO RGD PMID:23454554 RGD:9686093 NCBI chr12:1,032,377...1,044,465
Ensembl chr12:1,032,368...1,044,492
JBrowse link
G DDX42 DEAD-box helicase 42 ISO RGD PMID:17537823 RGD:9686091 NCBI chr 9:11,737,629...11,774,515
Ensembl chr 9:11,737,430...11,773,625
JBrowse link
G DDX46 DEAD-box helicase 46 ISO RGD PMID:23454554 RGD:9686093 NCBI chr11:22,834,843...22,906,976
Ensembl chr11:22,833,926...22,905,964
JBrowse link
G DHX15 DEAH-box helicase 15 ISO RGD PMID:23454554 RGD:9686093 NCBI chr 3:85,549,946...85,609,598
Ensembl chr 3:85,549,981...85,609,612
JBrowse link
G DHX16 DEAH-box helicase 16 ISO RGD PMID:23454554 RGD:9686093 NCBI chr12:460,669...478,026
Ensembl chr12:460,713...478,001
JBrowse link
G DHX38 DEAH-box helicase 38 ISO RGD PMID:23454554 RGD:9686093 NCBI chr 5:77,810,853...77,830,020
Ensembl chr 5:77,811,041...77,830,015
JBrowse link
G DHX8 DEAH-box helicase 8 ISO RGD PMID:23454554 RGD:9686093 NCBI chr 9:19,734,356...19,766,212
Ensembl chr 9:19,729,816...19,766,555
JBrowse link
G EFTUD2 elongation factor Tu GTP binding domain containing 2 ISO RGD PMID:23454554 PMID:23592432 RGD:9686090 RGD:9686093 NCBI chr 9:18,585,918...18,631,743
Ensembl chr 9:18,585,971...18,635,570
JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 ISO RGD PMID:15145352 RGD:9686404 NCBI chr 9:1,582,950...1,593,893
Ensembl chr 9:1,582,993...1,593,892
JBrowse link
G HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 ISO RGD PMID:17537823 RGD:9686091 NCBI chr11:25,464,601...25,467,460
Ensembl chr11:25,466,185...25,467,117
JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr27:1,013,459...1,020,083
Ensembl chr27:1,015,868...1,019,891
JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO RGD PMID:17537823 RGD:9686091 NCBI chr14:39,498,805...39,509,034
Ensembl chr14:39,500,897...39,508,952
JBrowse link
G HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr36:20,974,541...20,983,972
Ensembl chr36:20,974,648...20,980,137
JBrowse link
G HNRNPAB heterogeneous nuclear ribonucleoprotein A/B ISO RGD PMID:17537823 RGD:9686091 NCBI chr11:3,355,051...3,360,376
Ensembl chr11:3,355,050...3,360,258
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:17537823 RGD:9686091 NCBI chr32:6,323,444...6,341,238
Ensembl chr32:6,323,469...6,341,166
JBrowse link
G HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 ISO RGD PMID:17537823 RGD:9686091 NCBI chr11:2,050,753...2,059,999
Ensembl chr11:2,050,871...2,059,999
JBrowse link
G HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 ISO RGD PMID:17537823 RGD:9686091 NCBI chr 4:19,558,685...19,569,874
Ensembl chr 4:19,558,736...19,568,885
JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425
JBrowse link
G HNRNPL heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:17537823 RGD:9686091 NCBI chr 1:114,267,195...114,279,107
Ensembl chr 1:114,267,210...114,278,837
JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr20:52,993,934...53,034,608
Ensembl chr20:52,993,824...53,034,606
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:17537823 RGD:9686091 NCBI chr 2:76,073,553...76,108,763
Ensembl chr 2:76,077,022...76,105,433
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr 7:35,832,956...35,842,898
Ensembl chr 7:35,833,988...35,843,754
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:23742842 RGD:9686094 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797
JBrowse link
G ISY1 ISY1 splicing factor homolog ISO RGD PMID:23742842 RGD:9686094 NCBI chr20:2,945,636...2,972,245
Ensembl chr20:2,945,720...2,972,245
JBrowse link
G LOC475399 heterogeneous nuclear ribonucleoprotein C ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr15:18,239,810...18,299,065 JBrowse link
G LOC478184 pre-mRNA-splicing factor SYF2 ISO RGD PMID:23742842 RGD:9686094 NCBI chr 2:74,573,023...74,580,061 JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr12:1,270,328...1,279,269 JBrowse link
G LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr20:4,328,930...4,342,731
Ensembl chr20:4,329,038...4,342,859
JBrowse link
G LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr20:44,707,460...44,720,490
Ensembl chr20:44,707,460...44,720,490
JBrowse link
G LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr14:44,857,882...44,860,929
Ensembl chr14:44,857,930...44,860,821
JBrowse link
G LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr15:44,651,830...44,666,418
Ensembl chr15:44,651,830...44,666,418
JBrowse link
G LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr20:56,730,476...56,735,115
Ensembl chr20:56,730,486...56,735,112
JBrowse link
G LSM8 LSM8 homolog, U6 small nuclear RNA associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr14:56,908,344...56,916,512 JBrowse link
G MAGOHB mago homolog B, exon junction complex subunit ISO RGD PMID:15145352 RGD:9686404 NCBI chr27:35,125,786...35,133,372 JBrowse link
G MBNL1 muscleblind like splicing regulator 1 ISO RGD PMID:23498935 RGD:9686382 NCBI chr23:46,697,755...46,941,300
Ensembl chr23:46,737,790...46,938,233
JBrowse link
G PLRG1 pleiotropic regulator 1 ISO RGD PMID:23742842 RGD:9686094 NCBI chr15:52,196,998...52,213,378
Ensembl chr15:52,198,635...52,213,239
JBrowse link
G PNN pinin, desmosome associated protein ISO RGD PMID:15145352 RGD:9686404 NCBI chr 8:17,354,004...17,361,462
Ensembl chr 8:17,354,004...17,361,462
JBrowse link
G PPIE peptidylprolyl isomerase E ISO RGD PMID:18544344 PMID:23742842 RGD:9686094 RGD:9686376 NCBI chr15:3,156,067...3,173,028
Ensembl chr15:3,153,628...3,172,988
JBrowse link
G PPIG peptidylprolyl isomerase G ISO RGD PMID:18544344 RGD:9686376 NCBI chr36:14,306,458...14,357,757
Ensembl chr36:14,307,160...14,353,412
JBrowse link
G PPIH peptidylprolyl isomerase H ISO RGD PMID:18544344 RGD:9686376 NCBI chr15:671,323...689,627
Ensembl chr15:671,324...689,544
JBrowse link
G PPIL1 peptidylprolyl isomerase like 1 ISO RGD PMID:18544344 PMID:23742842 RGD:9686094 RGD:9686376 NCBI chr12:5,916,524...5,936,276
Ensembl chr12:5,917,228...5,942,943
JBrowse link
G PPIL2 peptidylprolyl isomerase like 2 ISO RGD PMID:18544344 RGD:9686376 NCBI chr26:30,939,556...30,966,210
Ensembl chr26:30,939,628...30,964,880
JBrowse link
G PPIL3 peptidylprolyl isomerase like 3 ISO RGD PMID:18544344 RGD:9686376 NCBI chr37:10,067,208...10,082,827
Ensembl chr37:10,054,237...10,082,759
JBrowse link
G PRPF18 pre-mRNA processing factor 18 ISO RGD PMID:24452469 RGD:9686092 NCBI chr 2:22,868,184...22,922,647 JBrowse link
G PRPF19 pre-mRNA processing factor 19 ISO RGD PMID:23742842 RGD:9686094 NCBI chr18:55,389,902...55,400,241
Ensembl chr18:55,389,897...55,400,240
JBrowse link
G PRPF3 pre-mRNA processing factor 3 ISO RGD PMID:19239890 RGD:9686089 NCBI chr17:59,552,227...59,577,027
Ensembl chr17:59,552,340...59,577,009
JBrowse link
G PRPF31 pre-mRNA processing factor 31 ISO RGD PMID:19239890 RGD:9686089 NCBI chr 1:103,073,359...103,090,652
Ensembl chr 1:103,073,380...103,090,652
JBrowse link
G PRPF4 pre-mRNA splicing tri-snRNP complex factor PRPF4 ISO RGD PMID:19239890 RGD:9686089 NCBI chr11:67,641,332...67,659,070
Ensembl chr11:67,641,459...67,657,870
JBrowse link
G PRPF6 pre-mRNA processing factor 6 ISO RGD PMID:19239890 RGD:9686089 NCBI chr24:47,439,210...47,483,531
Ensembl chr24:47,433,130...47,483,522
JBrowse link
G PRPF8 pre-mRNA processing factor 8 ISO RGD PMID:23592432 RGD:9686090 NCBI chr 9:45,797,882...45,827,365
Ensembl chr 9:45,797,959...45,828,071
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:23385723 RGD:9686381 NCBI chr20:57,806,450...57,818,435
Ensembl chr20:57,807,826...57,818,359
JBrowse link
G PTBP2 polypyrimidine tract binding protein 2 ISO RGD PMID:23498935 RGD:9686382 NCBI chr 6:52,870,944...52,948,673
Ensembl chr 6:52,872,310...52,949,025
JBrowse link
G QKI QKI, KH domain containing RNA binding ISO RGD PMID:23385723 RGD:9686381 NCBI chr 1:51,800,294...51,956,891
Ensembl chr 1:51,800,309...51,952,714
JBrowse link
G RBM22 RNA binding motif protein 22 ISO RGD PMID:23742842 RGD:9686094 NCBI chr 4:58,460,805...58,470,411
Ensembl chr 4:58,460,847...58,469,762
JBrowse link
G RBM8A RNA binding motif protein 8A ISO RGD PMID:15145352 RGD:9686404 NCBI chr17:58,722,449...58,726,017
Ensembl chr17:58,724,227...58,725,969
JBrowse link
G RBMX RNA binding motif protein X-linked ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr  X:107,173,599...107,182,404
Ensembl chr  X:107,175,634...107,182,347
JBrowse link
G RNPS1 RNA binding protein with serine rich domain 1 ISO RGD PMID:15145352 RGD:9686404 NCBI chr 6:38,719,713...38,729,437
Ensembl chr 6:38,719,792...38,728,773
JBrowse link
G SART3 spliceosome associated factor 3, U4/U6 recycling protein ISO RGD PMID:23592432 RGD:9686090 NCBI chr26:18,308,065...18,345,903
Ensembl chr26:18,308,733...18,345,353
JBrowse link
G SF1 splicing factor 1 ISO RGD PMID:19239890 RGD:9686089 NCBI chr18:52,380,058...52,393,833
Ensembl chr18:52,380,211...52,393,048
JBrowse link
G SF3A1 splicing factor 3a subunit 1 ISO RGD PMID:17537823 RGD:9686091 NCBI chr26:23,485,551...23,504,242
Ensembl chr26:23,485,797...23,504,346
JBrowse link
G SF3A2 splicing factor 3a subunit 2 ISO RGD PMID:17537823 RGD:9686091 NCBI chr20:56,789,450...56,796,004
Ensembl chr20:56,788,577...56,795,262
JBrowse link
G SF3A3 splicing factor 3a subunit 3 ISO RGD PMID:17537823 RGD:9686091 NCBI chr15:4,595,812...4,620,565 JBrowse link
G SF3B1 splicing factor 3b subunit 1 ISO RGD PMID:17537823 RGD:9686091 NCBI chr37:6,922,150...6,962,474
Ensembl chr37:6,924,047...6,962,896
JBrowse link
G SF3B2 splicing factor 3b subunit 2 ISO RGD PMID:17537823 RGD:9686091 NCBI chr18:51,197,924...51,212,397
Ensembl chr18:51,197,939...51,212,354
JBrowse link
G SF3B3 splicing factor 3b subunit 3 ISO RGD PMID:17537823 RGD:9686091 NCBI chr 5:76,490,622...76,543,877
Ensembl chr 5:76,490,682...76,543,877
JBrowse link
G SF3B4 splicing factor 3b subunit 4 ISO RGD PMID:17537823 RGD:9686091 NCBI chr17:59,208,989...59,214,643
Ensembl chr17:59,208,990...59,213,991
JBrowse link
G SF3B5 splicing factor 3b subunit 5 ISO RGD PMID:17537823 RGD:9686091 NCBI chr 1:35,558,249...35,558,998
Ensembl chr 1:35,558,599...35,558,859
JBrowse link
G SF3B6 splicing factor 3b subunit 6 ISO RGD PMID:17537823 RGD:9686091 NCBI chr17:18,548,633...18,559,694
Ensembl chr17:18,548,622...18,704,161
JBrowse link
G SLU7 SLU7 homolog, splicing factor ISO RGD PMID:24452469 RGD:9686092 NCBI chr 4:50,314,063...50,328,999
Ensembl chr 4:50,314,086...50,327,733
JBrowse link
G SNRNP200 small nuclear ribonucleoprotein U5 subunit 200 ISO RGD PMID:23454554 PMID:23592432 RGD:9686090 RGD:9686093 NCBI chr17:34,472,638...34,505,332
Ensembl chr17:34,472,767...34,505,333
JBrowse link
G SNRNP70 small nuclear ribonucleoprotein U1 subunit 70 ISO RGD PMID:23592432 RGD:9686090 NCBI chr 1:107,340,484...107,356,280
Ensembl chr 1:107,113,974...107,356,241
JBrowse link
G SNRPA small nuclear ribonucleoprotein polypeptide A ISO RGD PMID:23592432 RGD:9686090 NCBI chr 1:113,018,268...113,030,827
Ensembl chr 1:113,018,304...113,030,734
JBrowse link
G SNRPA1 small nuclear ribonucleoprotein polypeptide A' ISO RGD PMID:17537823 RGD:9686091 NCBI chr 3:39,777,947...39,791,256
Ensembl chr 3:39,777,987...39,790,849
JBrowse link
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr24:18,673,975...18,683,315
Ensembl chr24:18,674,039...18,683,229
JBrowse link
G SNRPB2 small nuclear ribonucleoprotein polypeptide B2 ISO RGD PMID:17537823 RGD:9686091 NCBI chr24:6,106,217...6,117,369
Ensembl chr24:6,106,217...6,117,369
JBrowse link
G SNRPC small nuclear ribonucleoprotein polypeptide C ISO RGD PMID:23592432 RGD:9686090 NCBI chr12:3,996,483...4,010,904
Ensembl chr12:3,996,520...4,010,889
JBrowse link
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr 7:66,407,313...66,421,193
Ensembl chr 7:66,407,313...66,421,194
JBrowse link
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr 1:109,891,253...109,896,712
Ensembl chr 1:109,891,223...109,896,711
JBrowse link
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr26:28,247,878...28,263,519 JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr38:515,808...521,536
Ensembl chr38:515,860...521,535
JBrowse link
G SNRPF small nuclear ribonucleoprotein polypeptide F ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr15:35,691,071...35,698,734 JBrowse link
G SNRPG small nuclear ribonucleoprotein polypeptide G ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755
JBrowse link
G SNU13 small nuclear ribonucleoprotein 13 ISO RGD PMID:19239890 RGD:9686089 NCBI chr10:23,622,897...23,631,526
Ensembl chr10:23,618,293...23,631,004
JBrowse link
G SNW1 SNW domain containing 1 ISO RGD PMID:23742842 RGD:9686094 NCBI chr 8:50,478,924...50,512,360
Ensembl chr 8:50,479,338...50,512,243
JBrowse link
G SRRM1 serine and arginine repetitive matrix 1 ISO RGD PMID:15145352 PMID:17537823 RGD:9686091 RGD:9686404 NCBI chr 2:75,018,637...75,053,908
Ensembl chr 2:75,019,339...75,049,398
JBrowse link
G SRRM2 serine/arginine repetitive matrix 2 ISO RGD PMID:17537823 RGD:9686091 NCBI chr 6:38,291,847...38,310,624
Ensembl chr 6:38,291,842...38,393,924
JBrowse link
G SRRM4 serine/arginine repetitive matrix 4 ISO RGD PMID:23498935 RGD:9686382 NCBI chr26:15,049,612...15,324,454
Ensembl chr26:15,057,392...15,318,325
JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr 9:32,692,517...32,696,325
Ensembl chr 9:32,694,073...32,696,285
JBrowse link
G SRSF10 serine and arginine rich splicing factor 10 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr 2:75,587,561...75,601,099
Ensembl chr 2:75,587,584...75,598,925
JBrowse link
G SRSF11 serine and arginine rich splicing factor 11 ISO RGD PMID:17537823 RGD:9686091 NCBI chr 6:75,473,794...75,495,860
Ensembl chr 6:75,464,957...75,492,103
JBrowse link
G SRSF12 serine and arginine rich splicing factor 12 ISO RGD PMID:17537823 RGD:9686091 NCBI chr12:48,355,844...48,398,753
Ensembl chr12:48,358,285...48,374,072
JBrowse link
G SRSF2 serine and arginine rich splicing factor 2 ISO RGD PMID:17537823 RGD:9686091 NCBI chr 9:4,028,414...4,032,371
Ensembl chr 9:4,028,482...4,030,793
JBrowse link
G SRSF3 serine and arginine rich splicing factor 3 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr12:5,677,879...5,686,220
Ensembl chr12:5,677,907...5,684,446
JBrowse link
G SRSF4 serine and arginine rich splicing factor 4 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr 2:71,418,626...71,434,140
Ensembl chr 2:71,394,037...71,471,997
JBrowse link
G SRSF5 serine and arginine rich splicing factor 5 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr 8:43,514,048...43,519,019
Ensembl chr 8:43,514,076...43,518,481
JBrowse link
G SRSF6 serine and arginine rich splicing factor 6 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr24:31,217,190...31,222,852
Ensembl chr24:31,217,184...31,218,618
JBrowse link
G SRSF7 serine and arginine rich splicing factor 7 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr17:30,809,743...30,816,269
Ensembl chr17:30,809,951...30,816,218
JBrowse link
G SRSF9 serine and arginine rich splicing factor 9 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chr26:16,363,275...16,369,699
Ensembl chr26:16,363,475...16,369,666
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:17537823 RGD:9686091 NCBI chr12:45,613,947...45,644,879
Ensembl chr12:45,618,234...45,644,778
JBrowse link
G TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 ISO RGD PMID:23385723 RGD:9686381 NCBI chr28:29,729,246...29,750,703
Ensembl chr28:29,731,950...29,750,229
JBrowse link
G TXNL4A thioredoxin like 4A ISO RGD PMID:19239890 RGD:9686089 NCBI chr 1:722,223...735,253
Ensembl chr 1:722,293...735,258
JBrowse link
G U2AF1 U2 small nuclear RNA auxiliary factor 1 ISO RGD PMID:19239890 RGD:9686089 NCBI chr31:37,263,265...37,276,710 JBrowse link
G U2AF2 U2 small nuclear RNA auxiliary factor 2 ISO RGD PMID:19239890 RGD:9686089 NCBI chr 1:102,074,759...102,091,326
Ensembl chr 1:102,074,790...102,091,385
JBrowse link
G XAB2 XPA binding protein 2 ISO RGD PMID:23742842 RGD:9686094 NCBI chr20:52,392,521...52,406,071
Ensembl chr20:52,392,566...52,405,997
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 4047
    regulatory pathway 2499
      pathway pertinent to DNA replication and repair, cell cycle, maintenance of genomic integrity, RNA and protein biosynthesis 1332
        RNA processing pathway 159
          RNA maturation pathway 159
            lncRNA maturation pathway 114
              lncRNA capping pathway 0
              lncRNA polyadenylation pathway 0
              spliceosome pathway 114
Path 2
Term Annotations click to browse term
  pathway 4047
    regulatory pathway 2499
      pathway pertinent to DNA replication and repair, cell cycle, maintenance of genomic integrity, RNA and protein biosynthesis 1332
        transcription pathway 926
          RNA polymerase transcription pathway 349
            eukaryotic RNA polymerase transcription pathway 349
              RNA polymerase II transcription pathway 280
                lncRNA maturation pathway 114
                  lncRNA capping pathway 0
                  lncRNA polyadenylation pathway 0
                  spliceosome pathway 114
paths to the root