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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:histone modification pathway
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Accession:PW:0001338 term browser browse the term
Definition:The tails of histone proteins are subject to a wide array of modifications of which methylation and acetylation have been more thoroughly documented. The modified residues are recognized by particular proteins or readers, in turn acting upon their targets. The modifications are rendered reversible by the enzymes that carry out the reaction in the opposite direction, also referred to as erasers.
Synonyms:related_synonym: histone modification
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show annotations for term's descendants           Sort by:
histone modification pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A730008H23Rik RIKEN cDNA A730008H23 gene ISO RGD PMID:23288364 RGD:9068945
G Aebp2 AE binding protein 2 ISO RGD PMID:24148750 RGD:9479059 NCBI chr 6:140,567,480...140,624,198
Ensembl chr 6:140,546,644...140,713,010 		JBrowse link
G Aplf aprataxin and PNKP like factor ISO RGD PMID:23288364 RGD:9068945 NCBI chr 6:87,605,407...87,649,244
Ensembl chr 6:87,605,406...87,649,175 		JBrowse link
G Asf1a anti-silencing function 1A histone chaperone ISO RGD PMID:23288364 RGD:9068945 NCBI chr10:53,473,057...53,485,321
Ensembl chr10:53,472,853...53,485,321 		JBrowse link
G Asf1b anti-silencing function 1B histone chaperone ISO RGD PMID:23288364 RGD:9068945 NCBI chr 8:84,682,323...84,696,824
Ensembl chr 8:84,682,136...84,696,826 		JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chr 3:88,857,721...88,986,682
Ensembl chr 3:88,857,929...88,986,682 		JBrowse link
G Ash2l ASH2 like histone lysine methyltransferase complex subunit ISO RGD PMID:22663077 RGD:9479053 NCBI chr 8:26,306,028...26,337,722
Ensembl chr 8:26,306,024...26,337,722 		JBrowse link
G Bap1 Brca1 associated protein 1 ISO RGD PMID:24647359 RGD:9479061 NCBI chr14:30,973,358...30,981,887
Ensembl chr14:30,973,407...30,981,901 		JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 ISO RGD PMID:23642229 RGD:9479074 NCBI chr11:117,740,063...117,746,569
Ensembl chr11:117,740,077...117,746,569 		JBrowse link
G Bmi1 Bmi1 polycomb ring finger oncogene ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 2:18,681,953...18,691,440
Ensembl chr 2:18,681,829...18,691,440 		JBrowse link
G Bptf bromodomain PHD finger transcription factor ISO RGD PMID:24686119 PMID:23642229 RGD:9479075, RGD:9479074 NCBI chr11:106,923,907...107,022,982
Ensembl chr11:106,923,907...107,022,953 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 ISO RGD PMID:24647359 RGD:9479061 NCBI chr  X:74,460,234...74,499,307
Ensembl chr  X:74,460,234...74,497,607 		JBrowse link
G Brd1 bromodomain containing 1 ISO RGD PMID:24686119 RGD:9479075 NCBI chr15:88,571,237...88,618,508
Ensembl chr15:88,571,237...88,618,436 		JBrowse link
G Brd2 bromodomain containing 2 ISO RGD PMID:24686119 RGD:9479075 NCBI chr17:34,330,993...34,341,581
Ensembl chr17:34,330,997...34,341,608 		JBrowse link
G Brd3 bromodomain containing 3 ISO RGD PMID:24686119 RGD:9479075 NCBI chr 2:27,335,588...27,397,669
Ensembl chr 2:27,335,591...27,397,674 		JBrowse link
G Brd4 bromodomain containing 4 ISO RGD PMID:24686119 RGD:9479075 NCBI chr17:32,415,246...32,503,717
Ensembl chr17:32,415,248...32,503,696 		JBrowse link
G Brd7 bromodomain containing 7 ISO RGD PMID:24686119 RGD:9479075 NCBI chr 8:89,056,522...89,089,249
Ensembl chr 8:89,057,667...89,088,822 		JBrowse link
G Brdt bromodomain, testis-specific ISO RGD PMID:24686119 RGD:9479075 NCBI chr 5:107,478,982...107,534,927
Ensembl chr 5:107,479,025...107,534,924 		JBrowse link
G Brf1 BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit ISO RGD PMID:23642229 RGD:9479074 NCBI chr12:112,919,251...112,964,327
Ensembl chr12:112,923,705...112,964,324 		JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 ISO RGD PMID:24583552 RGD:9479047 NCBI chr 9:21,458,163...21,500,763
Ensembl chr 9:21,458,190...21,503,919 		JBrowse link
G Cbx2 chromobox 2 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr11:118,913,845...118,922,101
Ensembl chr11:118,913,788...118,922,096 		JBrowse link
G Cbx4 chromobox 4 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr11:118,968,399...118,977,067
Ensembl chr11:118,968,399...118,977,047 		JBrowse link
G Cbx5 chromobox 5 ISO RGD PMID:23642229 RGD:9479074 NCBI chr15:103,099,973...103,148,337
Ensembl chr15:103,099,971...103,148,243 		JBrowse link
G Cbx6 chromobox 6 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr15:79,708,099...79,718,534
Ensembl chr15:79,708,097...79,718,889 		JBrowse link
G Cbx7 chromobox 7 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr15:79,800,005...79,855,344
Ensembl chr15:79,800,008...79,855,320 		JBrowse link
G Cbx8 chromobox 8 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr11:118,929,262...118,931,739
Ensembl chr11:118,927,131...118,931,795 		JBrowse link
G Chaf1a chromatin assembly factor 1, subunit A ISO RGD PMID:23288364 RGD:9068945 NCBI chr17:56,347,404...56,375,027
Ensembl chr17:56,347,439...56,379,289 		JBrowse link
G Chaf1b chromatin assembly factor 1, subunit B ISO RGD PMID:23288364 RGD:9068945 NCBI chr16:93,680,801...93,703,003
Ensembl chr16:93,680,789...93,703,003 		JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chr17:15,925,229...15,992,874
Ensembl chr17:15,925,229...15,992,872 		JBrowse link
G Crebbp CREB binding protein ISO RGD PMID:21151613 PMID:24686119 RGD:9104959, RGD:9479075 NCBI chr16:3,899,198...4,031,864
Ensembl chr16:3,899,192...4,031,861 		JBrowse link
G Cxxc1 CXXC finger protein 1 ISO RGD PMID:22663077 RGD:9479053 NCBI chr18:74,349,283...74,354,564
Ensembl chr18:74,349,195...74,354,567 		JBrowse link
G Daxx Fas death domain-associated protein ISO RGD PMID:23288364 RGD:9068945 NCBI chr17:34,128,379...34,134,564
Ensembl chr17:34,128,388...34,134,564 		JBrowse link
G Dot1l DOT1 like histone lysine methyltransferase ISO RGD PMID:23200123 RGD:7242632 NCBI chr10:80,590,935...80,631,295
Ensembl chr10:80,591,040...80,631,295 		JBrowse link
G Dpf3 double PHD fingers 3 ISO RGD PMID:23642229 RGD:9479074 NCBI chr12:83,260,525...83,534,510
Ensembl chr12:83,260,519...83,534,490 		JBrowse link
G Dpy30 dpy-30, histone methyltransferase complex regulatory subunit ISO RGD PMID:22663077 RGD:9479053 NCBI chr17:74,606,469...74,630,939
Ensembl chr17:74,606,469...74,630,939 		JBrowse link
G Eed embryonic ectoderm development ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr 7:89,603,862...89,630,184
Ensembl chr 7:89,603,862...89,630,191 		JBrowse link
G Ehmt1 euchromatic histone methyltransferase 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 2:24,680,781...24,809,658
Ensembl chr 2:24,679,940...24,809,626 		JBrowse link
G Ehmt2 euchromatic histone lysine N-methyltransferase 2 ISO RGD PMID:23200123 PMID:23642229 RGD:7242632, RGD:9479074 NCBI chr17:35,117,427...35,133,049
Ensembl chr17:35,117,445...35,133,028 		JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:21151613 RGD:9104959 NCBI chr15:81,470,329...81,536,273
Ensembl chr15:81,469,552...81,536,278 		JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr11:101,081,941...101,117,268
Ensembl chr11:101,081,941...101,117,289 		JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO RGD PMID:23200123 PMID:23473600 PMID:24148750 RGD:7242632, RGD:9479058, RGD:9479059 NCBI chr 6:47,507,208...47,613,843
Ensembl chr 6:47,507,073...47,572,275 		JBrowse link
G H2ax H2A.X variant histone ISO RGD PMID:24614311 RGD:9075965 NCBI chr 9:44,246,012...44,247,374
Ensembl chr 9:44,245,991...44,247,374 		JBrowse link
G H2az1 H2A.Z variant histone 1 ISO RGD PMID:24696452 RGD:9074213 NCBI chr 3:137,570,248...137,572,683
Ensembl chr 3:137,570,248...137,572,683 		JBrowse link
G H3f3a H3.3 histone A ISO RGD PMID:24614311 RGD:9075965 NCBI chr 1:180,630,125...180,641,127
Ensembl chr 1:180,628,397...180,641,508 		JBrowse link
G H3f3b H3.3 histone B ISO RGD PMID:24614311 RGD:9075965 NCBI chr11:115,912,787...115,921,313
Ensembl chr11:115,912,738...115,918,788 		JBrowse link
G Hat1 histone aminotransferase 1 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 2:71,219,604...71,271,966
Ensembl chr 2:71,219,302...71,271,966 		JBrowse link
G Hcfc1 host cell factor C1 ISO RGD PMID:22663077 RGD:9479053 NCBI chr  X:72,986,400...73,011,430
Ensembl chr  X:72,986,398...73,009,963 		JBrowse link
G Hdac1 histone deacetylase 1 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506 		JBrowse link
G Hdac10 histone deacetylase 10 ISO RGD PMID:21151613 RGD:9104959 NCBI chr15:89,007,506...89,012,903
Ensembl chr15:89,007,510...89,012,903 		JBrowse link
G Hdac11 histone deacetylase 11 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 6:91,133,652...91,151,674
Ensembl chr 6:91,133,647...91,151,674 		JBrowse link
G Hdac2 histone deacetylase 2 ISO RGD PMID:21151613 RGD:9104959 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885 		JBrowse link
G Hdac3 histone deacetylase 3 ISO RGD PMID:21151613 RGD:9104959 NCBI chr18:38,070,024...38,088,073
Ensembl chr18:38,068,897...38,088,069 		JBrowse link
G Hdac4 histone deacetylase 4 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 1:91,856,501...92,123,424
Ensembl chr 1:91,856,501...92,123,421 		JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:21151613 RGD:9104959 NCBI chr11:102,085,244...102,120,968
Ensembl chr11:102,085,258...102,120,992 		JBrowse link
G Hdac6 histone deacetylase 6 ISO RGD PMID:21151613 RGD:9104959 NCBI chr  X:7,796,355...7,814,284
Ensembl chr  X:7,796,359...7,814,128 		JBrowse link
G Hdac7 histone deacetylase 7 ISO RGD PMID:21151613 RGD:9104959 NCBI chr15:97,690,542...97,742,383
Ensembl chr15:97,690,545...97,742,383 		JBrowse link
G Hdac8 histone deacetylase 8 ISO RGD PMID:21151613 RGD:9104959 NCBI chr  X:101,328,244...101,549,005
Ensembl chr  X:101,328,245...101,548,965 		JBrowse link
G Hdac9 histone deacetylase 9 ISO RGD PMID:21151613 RGD:9104959 NCBI chr12:34,097,579...34,967,094
Ensembl chr12:34,097,579...34,967,094 		JBrowse link
G Hira histone cell cycle regulator ISO RGD PMID:23288364 RGD:9068945 NCBI chr16:18,695,500...18,789,059
Ensembl chr16:18,695,787...18,789,059 		JBrowse link
G Hjurp Holliday junction recognition protein ISO RGD PMID:23288364 RGD:9068945 NCBI chr 1:88,186,578...88,205,366
Ensembl chr 1:88,190,193...88,205,355 		JBrowse link
G Ing2 inhibitor of growth family, member 2 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 8:48,120,213...48,128,627
Ensembl chr 8:48,120,213...48,128,591 		JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr13:44,881,817...45,075,119
Ensembl chr13:44,882,950...45,075,119 		JBrowse link
G Jmjd1c jumonji domain containing 1C ISO RGD PMID:23200123 RGD:7242632 NCBI chr10:66,932,189...67,092,105
Ensembl chr10:66,931,904...67,092,105 		JBrowse link
G Kat2a K(lysine) acetyltransferase 2A ISO RGD PMID:21151613 PMID:23642229 RGD:9104959, RGD:9479074 NCBI chr11:100,595,572...100,603,293
Ensembl chr11:100,595,572...100,603,291 		JBrowse link
G Kat2b K(lysine) acetyltransferase 2B ISO RGD PMID:21151613 RGD:9104959 NCBI chr17:53,873,802...53,979,749
Ensembl chr17:53,873,889...53,979,748 		JBrowse link
G Kat5 K(lysine) acetyltransferase 5 ISO RGD PMID:21151613 RGD:9104959 NCBI chr19:5,653,042...5,661,584
Ensembl chr19:5,653,042...5,660,265 		JBrowse link
G Kat6a K(lysine) acetyltransferase 6A ISO RGD PMID:21151613 RGD:9104959 NCBI chr 8:23,349,458...23,433,275
Ensembl chr 8:23,349,551...23,433,275 		JBrowse link
G Kat6b K(lysine) acetyltransferase 6B ISO RGD PMID:21151613 RGD:9104959 NCBI chr14:21,549,284...21,722,546
Ensembl chr14:21,531,502...21,722,546 		JBrowse link
G Kat7 K(lysine) acetyltransferase 7 ISO RGD PMID:21151613 RGD:9104959 NCBI chr11:95,162,683...95,201,030
Ensembl chr11:95,165,085...95,201,072 		JBrowse link
G Kat8 K(lysine) acetyltransferase 8 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 7:127,511,689...127,525,010
Ensembl chr 7:127,511,688...127,525,009 		JBrowse link
G Kdm1a lysine (K)-specific demethylase 1A ISO RGD PMID:23200123 RGD:7242632 NCBI chr 4:136,277,844...136,330,127
Ensembl chr 4:136,277,851...136,330,034 		JBrowse link
G Kdm1b lysine (K)-specific demethylase 1B ISO RGD PMID:23200123 RGD:7242632 NCBI chr13:47,196,849...47,238,085
Ensembl chr13:47,196,975...47,238,755 		JBrowse link
G Kdm2a lysine (K)-specific demethylase 2A ISO RGD PMID:23200123 RGD:7242632 NCBI chr19:4,366,172...4,448,749
Ensembl chr19:4,364,447...4,448,313 		JBrowse link
G Kdm2b lysine (K)-specific demethylase 2B ISO RGD PMID:23200123 RGD:7242632 NCBI chr 5:123,008,727...123,127,333
Ensembl chr 5:123,008,728...123,127,886 		JBrowse link
G Kdm3a lysine (K)-specific demethylase 3A ISO RGD PMID:23200123 RGD:7242632 NCBI chr 6:71,565,954...71,609,963
Ensembl chr 6:71,565,956...71,609,974 		JBrowse link
G Kdm3b KDM3B lysine (K)-specific demethylase 3B ISO RGD PMID:23200123 RGD:7242632 NCBI chr18:34,910,061...34,972,423
Ensembl chr18:34,910,100...34,971,713 		JBrowse link
G Kdm4a lysine (K)-specific demethylase 4A ISO RGD PMID:23200123 PMID:24035451 PMID:23642229 RGD:7242632, RGD:9479148, RGD:9479074 NCBI chr 4:117,994,154...118,037,216
Ensembl chr 4:117,994,154...118,037,240 		JBrowse link
G Kdm4b lysine (K)-specific demethylase 4B ISO RGD PMID:23200123 RGD:7242632 NCBI chr17:56,632,975...56,710,774
Ensembl chr17:56,633,062...56,709,870 		JBrowse link
G Kdm4c lysine (K)-specific demethylase 4C ISO RGD PMID:23200123 RGD:7242632 NCBI chr 4:74,160,734...74,324,101
Ensembl chr 4:74,160,734...74,324,097 		JBrowse link
G Kdm4d lysine (K)-specific demethylase 4D ISO RGD PMID:23200123 RGD:7242632 NCBI chr 9:14,373,844...14,411,818
Ensembl chr 9:14,373,844...14,411,778 		JBrowse link
G Kdm5a lysine demethylase 5A ISO RGD PMID:23200123 RGD:7242632 NCBI chr 6:120,341,060...120,421,535
Ensembl chr 6:120,341,085...120,421,535 		JBrowse link
G Kdm5b lysine demethylase 5B ISO RGD PMID:23200123 RGD:7242632 NCBI chr 1:134,487,916...134,560,621
Ensembl chr 1:134,487,909...134,563,023 		JBrowse link
G Kdm5c lysine demethylase 5C ISO RGD PMID:23200123 RGD:7242632 NCBI chr  X:151,015,698...151,062,098
Ensembl chr  X:151,016,016...151,057,531 		JBrowse link
G Kdm5d lysine demethylase 5D ISO RGD PMID:23200123 RGD:7242632 NCBI chr  Y:897,566...946,316
Ensembl chr  Y:897,788...956,786 		JBrowse link
G Kdm6a lysine (K)-specific demethylase 6A ISO RGD PMID:22663077 PMID:23200123 RGD:9479053, RGD:7242632 NCBI chr  X:18,027,101...18,147,061
Ensembl chr  X:18,028,814...18,146,175 		JBrowse link
G Kdm6b KDM1 lysine (K)-specific demethylase 6B ISO RGD PMID:23200123 RGD:7242632 NCBI chr11:69,289,334...69,311,188
Ensembl chr11:69,289,334...69,304,501 		JBrowse link
G Kdm7a lysine (K)-specific demethylase 7A ISO RGD PMID:23200123 RGD:7242632 NCBI chr 6:39,113,554...39,183,707
Ensembl chr 6:39,113,557...39,183,723 		JBrowse link
G Kdm8 lysine (K)-specific demethylase 8 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 7:125,043,788...125,062,823
Ensembl chr 7:125,043,848...125,061,441 		JBrowse link
G Kmt2a lysine (K)-specific methyltransferase 2A ISO RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr 9:44,714,652...44,793,492
Ensembl chr 9:44,714,652...44,792,594 		JBrowse link
G Kmt2b lysine (K)-specific methyltransferase 2B ISO RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr 7:30,268,280...30,288,371
Ensembl chr 7:30,268,283...30,288,151 		JBrowse link
G Kmt2c lysine (K)-specific methyltransferase 2C ISO RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr 5:25,476,793...25,703,853
Ensembl chr 5:25,476,796...25,703,781 		JBrowse link
G Kmt2d lysine (K)-specific methyltransferase 2D ISO RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr15:98,729,550...98,771,958
Ensembl chr15:98,729,550...98,769,085 		JBrowse link
G Kmt2e lysine (K)-specific methyltransferase 2E ISO RGD PMID:23200123 RGD:7242632 NCBI chr 5:23,638,034...23,709,233
Ensembl chr 5:23,639,439...23,709,233 		JBrowse link
G Kmt5a lysine methyltransferase 5A ISO RGD PMID:23200123 RGD:7242632 NCBI chr 5:124,577,980...124,600,371
Ensembl chr 5:124,577,993...124,600,371 		JBrowse link
G Kmt5b lysine methyltransferase 5B ISO RGD PMID:23200123 RGD:7242632 NCBI chr19:3,816,436...3,868,303
Ensembl chr19:3,817,421...3,868,303 		JBrowse link
G Kmt5c lysine methyltransferase 5C ISO RGD PMID:23200123 RGD:7242632 NCBI chr 7:4,743,091...4,750,513
Ensembl chr 7:4,743,114...4,750,513 		JBrowse link
G L3mbtl1 L3MBTL1 histone methyl-lysine binding protein ISO RGD PMID:23642229 RGD:9479074 NCBI chr 2:162,784,260...162,819,726
Ensembl chr 2:162,785,392...162,816,442 		JBrowse link
G Lbr lamin B receptor ISO RGD PMID:24035451 RGD:9479148 NCBI chr 1:181,642,880...181,669,933
Ensembl chr 1:181,642,900...181,670,611 		JBrowse link
G Macroh2a1 macroH2A.1 histone ISO RGD PMID:24696452 RGD:9074213 NCBI chr13:56,221,435...56,283,439
Ensembl chr13:56,221,432...56,284,174 		JBrowse link
G Macroh2a2 macroH2A.2 histone ISO RGD PMID:24696452 RGD:9074213 NCBI chr10:61,574,419...61,620,383
Ensembl chr10:61,574,444...61,619,926 		JBrowse link
G Mcph1 microcephaly, primary autosomal recessive 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 8:18,645,132...18,858,110
Ensembl chr 8:18,645,147...18,853,205 		JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chr17:36,152,390...36,170,562
Ensembl chr17:36,152,407...36,170,562 		JBrowse link
G Men1 multiple endocrine neoplasia 1 ISO RGD PMID:22663077 RGD:9479053 NCBI chr19:6,385,009...6,390,924
Ensembl chr19:6,385,009...6,390,921 		JBrowse link
G Mtf2 metal response element binding transcription factor 2 ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr 5:108,213,518...108,257,085
Ensembl chr 5:108,213,540...108,256,870 		JBrowse link
G Mysm1 myb-like, SWIRM and MPN domains 1 ISO RGD PMID:24647359 RGD:9479061 NCBI chr 4:94,830,274...94,867,392
Ensembl chr 4:94,830,277...94,867,337 		JBrowse link
G Nap1l1 nucleosome assembly protein 1-like 1 ISO RGD PMID:23288364 RGD:9068945 NCBI chr10:111,308,754...111,334,011
Ensembl chr10:111,309,084...111,334,011 		JBrowse link
G Nasp nuclear autoantigenic sperm protein (histone-binding) ISO RGD PMID:23288364 RGD:9068945 NCBI chr 4:116,458,249...116,488,894
Ensembl chr 4:116,458,249...116,485,138 		JBrowse link
G Ncoa6 nuclear receptor coactivator 6 ISO RGD PMID:22663077 RGD:9479053 NCBI chr 2:155,232,585...155,315,741
Ensembl chr 2:155,232,576...155,315,814 		JBrowse link
G Nsd1 nuclear receptor-binding SET-domain protein 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chr13:55,357,595...55,466,138
Ensembl chr13:55,357,595...55,466,138 		JBrowse link
G Nsd3 nuclear receptor binding SET domain protein 3 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 8:26,091,617...26,209,694
Ensembl chr 8:26,091,617...26,209,694 		JBrowse link
G Orc1 origin recognition complex, subunit 1 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 4:108,436,651...108,472,030
Ensembl chr 4:108,436,620...108,472,030 		JBrowse link
G Pagr1a PAXIP1 associated glutamate rich protein 1A ISO RGD PMID:22663077 RGD:9479053 NCBI chr 7:126,614,223...126,616,524
Ensembl chr 7:126,614,205...126,616,524
Ensembl chr 7:126,614,205...126,616,524 		JBrowse link
G Paxip1 PAX interacting (with transcription-activation domain) protein 1 ISO RGD PMID:22663077 RGD:9479053 NCBI chr 5:27,947,044...27,999,326
Ensembl chr 5:27,945,078...27,996,689 		JBrowse link
G Pbrm1 polybromo 1 ISO RGD PMID:24686119 RGD:9479075 NCBI chr14:30,741,095...30,843,549
Ensembl chr14:30,741,095...30,843,549 		JBrowse link
G Pcgf1 polycomb group ring finger 1 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 6:83,047,573...83,057,836
Ensembl chr 6:83,054,850...83,057,836 		JBrowse link
G Pcgf2 polycomb group ring finger 2 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr11:97,579,647...97,593,260
Ensembl chr11:97,579,649...97,591,323 		JBrowse link
G Pcgf3 polycomb group ring finger 3 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 5:108,609,082...108,654,842
Ensembl chr 5:108,609,098...108,654,842 		JBrowse link
G Pcgf5 polycomb group ring finger 5 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr19:36,325,729...36,438,370
Ensembl chr19:36,325,709...36,438,370 		JBrowse link
G Pcgf6 polycomb group ring finger 6 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr19:47,022,056...47,039,379
Ensembl chr19:47,022,056...47,039,345 		JBrowse link
G Phc1 polyhomeotic 1 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 6:122,294,690...122,317,551
Ensembl chr 6:122,294,690...122,317,520 		JBrowse link
G Phc2 polyhomeotic 2 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 4:128,548,448...128,646,674
Ensembl chr 4:128,548,495...128,646,674 		JBrowse link
G Phc3 polyhomeotic 3 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 3:30,953,444...31,023,628
Ensembl chr 3:30,953,520...31,023,564 		JBrowse link
G Phf1 PHD finger protein 1 ISO RGD PMID:23473600 PMID:24148750 PMID:24035451 PMID:23642229 RGD:9479058, RGD:9479059, RGD:9479148, RGD:9479074 NCBI chr17:27,152,101...27,156,882
Ensembl chr17:27,152,026...27,156,882 		JBrowse link
G Phf19 PHD finger protein 19 ISO RGD PMID:23473600 PMID:24148750 PMID:24035451 PMID:23642229 RGD:9479058, RGD:9479059, RGD:9479148, RGD:9479074 NCBI chr 2:34,783,764...34,804,365
Ensembl chr 2:34,783,769...34,804,038 		JBrowse link
G Phf2 PHD finger protein 2 ISO RGD PMID:23200123 RGD:7242632 NCBI chr13:48,955,226...49,024,361
Ensembl chr13:48,955,226...49,024,595 		JBrowse link
G Phf8 PHD finger protein 8 ISO RGD PMID:23200123 RGD:7242632 NCBI chr  X:150,303,621...150,416,855
Ensembl chr  X:150,303,668...150,416,855 		JBrowse link
G Prdm16 PR domain containing 16 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 4:154,400,579...154,721,851
Ensembl chr 4:154,400,582...154,721,330 		JBrowse link
G Prdm2 PR domain containing 2, with ZNF domain ISO RGD PMID:23200123 RGD:7242632 NCBI chr 4:142,833,961...142,939,560
Ensembl chr 4:142,833,961...142,939,565 		JBrowse link
G Prdm6 PR domain containing 6 ISO RGD PMID:23200123 RGD:7242632 NCBI chr18:53,597,027...53,708,976
Ensembl chr18:53,596,655...53,708,979 		JBrowse link
G Prdm8 PR domain containing 8 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 5:98,315,241...98,335,313
Ensembl chr 5:98,315,057...98,336,850 		JBrowse link
G Prdm9 PR domain containing 9 ISO RGD PMID:23200123 RGD:7242632 NCBI chr17:15,763,334...15,784,636
Ensembl chr17:15,763,341...15,784,616 		JBrowse link
G Prmt1 protein arginine N-methyltransferase 1 ISO RGD PMID:24583552 RGD:9479047 NCBI chr 7:44,626,179...44,635,844
Ensembl chr 7:44,625,413...44,635,992 		JBrowse link
G Prmt2 protein arginine N-methyltransferase 2 ISO RGD PMID:24583552 RGD:9479047 NCBI chr10:76,043,060...76,073,699
Ensembl chr10:76,043,056...76,073,699 		JBrowse link
G Prmt5 protein arginine N-methyltransferase 5 ISO RGD PMID:24583552 RGD:9479047 NCBI chr14:54,744,639...54,754,927
Ensembl chr14:54,744,644...54,754,982 		JBrowse link
G Prmt6 protein arginine N-methyltransferase 6 ISO RGD PMID:24583552 RGD:9479047 NCBI chr 3:110,153,420...110,158,315
Ensembl chr 3:110,153,425...110,158,314 		JBrowse link
G Prmt7 protein arginine N-methyltransferase 7 ISO RGD PMID:24583552 RGD:9479047 NCBI chr 8:106,937,686...106,978,326
Ensembl chr 8:106,937,568...106,979,426 		JBrowse link
G Rag2 recombination activating gene 2 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874 		JBrowse link
G Rbbp4 retinoblastoma binding protein 4, chromatin remodeling factor ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr 4:129,200,893...129,229,163
Ensembl chr 4:129,200,893...129,229,163 		JBrowse link
G Rbbp5 retinoblastoma binding protein 5, histone lysine methyltransferase complex subunit ISO RGD PMID:22663077 RGD:9479053 NCBI chr 1:132,405,087...132,436,382
Ensembl chr 1:132,405,103...132,433,397 		JBrowse link
G Rbbp7 retinoblastoma binding protein 7, chromatin remodeling factor ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr  X:161,543,368...161,562,086
Ensembl chr  X:161,543,398...161,562,088 		JBrowse link
G Ring1 ring finger protein 1 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr17:34,239,766...34,243,654
Ensembl chr17:34,239,766...34,243,654 		JBrowse link
G Rnf2 ring finger protein 2 ISO RGD PMID:23473600 PMID:25065329 RGD:9479058, RGD:9479060 NCBI chr 1:151,345,159...151,376,562
Ensembl chr 1:151,333,755...151,376,706 		JBrowse link
G Setd1a SET domain containing 1A ISO RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr 7:127,376,561...127,399,294
Ensembl chr 7:127,375,842...127,399,294 		JBrowse link
G Setd1b SET domain containing 1B ISO RGD PMID:23200123 PMID:22663077 RGD:7242632, RGD:9479053 NCBI chr 5:123,280,109...123,306,693
Ensembl chr 5:123,280,256...123,306,692 		JBrowse link
G Setd2 SET domain containing 2 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 9:110,361,368...110,447,703
Ensembl chr 9:110,361,665...110,447,701 		JBrowse link
G Setd7 SET domain containing (lysine methyltransferase) 7 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 3:51,422,740...51,468,519
Ensembl chr 3:51,422,740...51,468,300 		JBrowse link
G Setdb1 SET domain, bifurcated 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 3:95,230,836...95,264,513
Ensembl chr 3:95,230,836...95,264,513 		JBrowse link
G Sgf29 SAGA complex associated factor 29 ISO RGD PMID:24035451 PMID:23642229 RGD:9479148, RGD:9479074 NCBI chr 7:126,247,558...126,271,951
Ensembl chr 7:126,248,481...126,272,097 		JBrowse link
G Sirt1 sirtuin 1 ISO RGD PMID:21151613 RGD:9104959 NCBI chr10:63,154,784...63,174,814
Ensembl chr10:63,154,784...63,217,483 		JBrowse link
G Sirt2 sirtuin 2 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 7:28,466,192...28,488,086
Ensembl chr 7:28,466,160...28,488,086 		JBrowse link
G Sirt3 sirtuin 3 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 7:140,443,576...140,462,222
Ensembl chr 7:140,443,579...140,462,222 		JBrowse link
G Sirt4 sirtuin 4 ISO RGD PMID:21151613 RGD:9104959 NCBI chr 5:115,616,065...115,628,322
Ensembl chr 5:115,616,069...115,622,784 		JBrowse link
G Sirt5 sirtuin 5 ISO RGD PMID:21151613 RGD:9104959 NCBI chr13:43,518,849...43,549,073
Ensembl chr13:43,518,972...43,548,679 		JBrowse link
G Sirt6 sirtuin 6 ISO RGD PMID:21151613 RGD:9104959 NCBI chr10:81,457,621...81,463,631
Ensembl chr10:81,457,619...81,463,631 		JBrowse link
G Sirt7 sirtuin 7 ISO RGD PMID:21151613 RGD:9104959 NCBI chr11:120,509,197...120,515,840
Ensembl chr11:120,509,198...120,516,066 		JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 ISO RGD PMID:24686119 RGD:9479075 NCBI chr19:26,582,578...26,755,721
Ensembl chr19:26,582,450...26,755,722 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO RGD PMID:24686119 RGD:9479075 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Smyd1 SET and MYND domain containing 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 6:71,190,924...71,239,265
Ensembl chr 6:71,190,924...71,299,217 		JBrowse link
G Smyd2 SET and MYND domain containing 2 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 1:189,612,689...189,654,758
Ensembl chr 1:189,612,689...189,654,560 		JBrowse link
G Smyd3 SET and MYND domain containing 3 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 1:178,779,525...179,345,618
Ensembl chr 1:178,779,525...179,345,606 		JBrowse link
G Spin1 spindlin 1 ISO RGD PMID:24035451 RGD:9479148 NCBI chr13:51,254,523...51,306,588
Ensembl chr13:51,254,916...51,306,582 		JBrowse link
G Ssrp1 structure specific recognition protein 1 ISO RGD PMID:23288364 RGD:9068945 NCBI chr 2:84,867,519...84,877,453
Ensembl chr 2:84,867,578...84,877,453 		JBrowse link
G Supt16 SPT16, facilitates chromatin remodeling subunit ISO RGD PMID:23288364 RGD:9068945 NCBI chr14:52,397,876...52,434,696
Ensembl chr14:52,397,871...52,434,873 		JBrowse link
G Suv39h1 suppressor of variegation 3-9 1 ISO RGD PMID:23200123 RGD:7242632 NCBI chr  X:7,927,401...7,940,994
Ensembl chr  X:7,927,410...7,940,999 		JBrowse link
G Suv39h2 suppressor of variegation 3-9 2 ISO RGD PMID:23200123 RGD:7242632 NCBI chr 2:3,456,852...3,476,085
Ensembl chr 2:3,456,852...3,476,068 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit ISO RGD PMID:23473600 PMID:24148750 RGD:9479058, RGD:9479059 NCBI chr11:79,883,932...79,924,949
Ensembl chr11:79,883,932...79,924,949 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO RGD PMID:23642229 PMID:24686119 RGD:9479074, RGD:9479075 NCBI chr  X:100,576,335...100,644,635
Ensembl chr  X:100,576,279...100,644,640 		JBrowse link
G Tdrd3 tudor domain containing 3 ISO RGD PMID:24035451 PMID:23211769 RGD:9479148, RGD:9479163 NCBI chr14:87,647,598...87,782,944
Ensembl chr14:87,654,075...87,782,940 		JBrowse link
G Trim24 tripartite motif-containing 24 ISO RGD PMID:23642229 RGD:9479074 NCBI chr 6:37,846,816...37,945,380
Ensembl chr 6:37,847,746...37,943,231 		JBrowse link
G Trim33 tripartite motif-containing 33 ISO RGD PMID:23642229 PMID:24686119 RGD:9479074, RGD:9479075 NCBI chr 3:103,186,609...103,266,086
Ensembl chr 3:103,186,609...103,266,091 		JBrowse link
G Trp53bp1 transformation related protein 53 binding protein 1 ISO RGD PMID:24035451 PMID:23642229 RGD:9479148, RGD:9479074 NCBI chr 2:121,025,316...121,126,830
Ensembl chr 2:121,023,762...121,101,888 		JBrowse link
G Uhrf1 ubiquitin-like, containing PHD and RING finger domains, 1 ISO RGD PMID:24035451 PMID:23642229 RGD:9479148, RGD:9479074 NCBI chr17:56,610,405...56,630,486
Ensembl chr17:56,610,321...56,630,486 		JBrowse link
G Usp12 ubiquitin specific peptidase 12 ISO RGD PMID:24647359 RGD:9479061 NCBI chr 5:146,671,619...146,731,817
Ensembl chr 5:146,671,619...146,731,816 		JBrowse link
G Usp16 ubiquitin specific peptidase 16 ISO RGD PMID:24647359 RGD:9479061 NCBI chr16:87,251,833...87,280,403
Ensembl chr16:87,251,591...87,280,405 		JBrowse link
G Usp21 ubiquitin specific peptidase 21 ISO RGD PMID:24647359 RGD:9479061 NCBI chr 1:171,109,523...171,115,534
Ensembl chr 1:171,109,519...171,115,564 		JBrowse link
G Usp22 ubiquitin specific peptidase 22 ISO RGD PMID:24647359 RGD:9479061 NCBI chr11:61,042,607...61,065,885
Ensembl chr11:61,042,611...61,065,881 		JBrowse link
G Usp3 ubiquitin specific peptidase 3 ISO RGD PMID:24647359 RGD:9479061 NCBI chr 9:66,421,573...66,501,996
Ensembl chr 9:66,421,919...66,500,424 		JBrowse link
G Usp44 ubiquitin specific peptidase 44 ISO RGD PMID:24647359 RGD:9479061 NCBI chr10:93,655,831...93,696,792
Ensembl chr10:93,667,417...93,693,950 		JBrowse link
G Wdr5 WD repeat domain 5 ISO RGD PMID:22663077 PMID:23642229 RGD:9479053, RGD:9479074 NCBI chr 2:27,405,159...27,426,547
Ensembl chr 2:27,405,169...27,426,547 		JBrowse link
G Wdr82 WD repeat domain containing 82 ISO RGD PMID:22663077 RGD:9479053 NCBI chr 9:106,048,098...106,068,905
Ensembl chr 9:106,048,127...106,068,338 		JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide ISO RGD PMID:23642229 RGD:9479074 NCBI chr15:36,770,505...36,803,228
Ensembl chr15:36,771,014...36,797,173 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6074
    regulatory pathway 3686
      pathway pertinent to DNA replication and repair, cell cycle, maintenance of genomic integrity, RNA and protein biosynthesis 1656
        chromatin modification/remodeling pathway 265
          chromatin modification pathway 203
            histone modification pathway 181
              altered histone modification pathway 0
Path 2
Term Annotations click to browse term
  pathway 6074
    regulatory pathway 3686
      pathway pertinent to DNA replication and repair, cell cycle, maintenance of genomic integrity, RNA and protein biosynthesis 1656
        DNA damage response pathway 403
          DNA repair pathway 382
            chromatin modification/remodeling pathway 265
              chromatin modification pathway 203
                histone modification pathway 181
                  altered histone modification pathway 0
paths to the root