PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: RNA polymerase transcription pathway
Accession: PW:0001272
browse the term
Definition: The pathway of DNA transcription carried out by the prokaryotic and the several eukaryotic polymerases.
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Clp1
cleavage factor polyribonucleotide kinase subunit 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624864:3,063,555...3,067,045
Ensembl chrNW_004624864:3,063,555...3,067,051
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Cpsf1
cleavage and polyadenylation specific factor 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624735:12,444,371...12,457,864
Ensembl chrNW_004624735:12,444,386...12,457,864
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Cpsf2
cleavage and polyadenylation specific factor 2
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624734:8,737,023...8,769,088
Ensembl chrNW_004624734:8,736,911...8,768,583
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Cpsf3
cleavage and polyadenylation specific factor 3
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624969:265,457...290,514
Ensembl chrNW_004624969:265,117...290,361
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Cpsf4
cleavage and polyadenylation specific factor 4
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624740:32,860,217...32,876,878
Ensembl chrNW_004624740:32,860,137...32,876,878
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Cpsf6
cleavage and polyadenylation specific factor 6
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624948:53,317...83,983
Ensembl chrNW_004624948:56,246...84,051
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Cpsf7
cleavage and polyadenylation specific factor 7
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624926:802,033...822,372
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Cstf1
cleavage stimulation factor subunit 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624790:133,872...143,762
Ensembl chrNW_004624790:132,023...144,363
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Cstf2
cleavage stimulation factor subunit 2
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624902:1,755,308...1,780,826
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Cstf2t
cleavage stimulation factor subunit 2 tau variant
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624791:11,924,945...11,929,106
Ensembl chrNW_004624791:11,925,197...11,927,188
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Cstf3
cleavage stimulation factor subunit 3
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624767:14,071,196...14,144,758
Ensembl chrNW_004624767:14,071,392...14,144,258
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Dxo
decapping exoribonuclease
ISO
RGD
PMID:21957020
RGD:9681741
NCBI chrNW_004624754:24,281,099...24,283,403
Ensembl chrNW_004624754:24,281,101...24,287,647
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Fip1l1
factor interacting with PAPOLA and CPSF1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624761:16,067,962...16,145,116
Ensembl chrNW_004624761:16,071,097...16,145,052
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Nudt21
nudix hydrolase 21
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624757:115,249...130,775
Ensembl chrNW_004624757:114,844...130,097
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Papola
poly(A) polymerase alpha
ISO
RGD
PMID:24243805
RGD:9681742
NCBI chrNW_004624734:6,846,537...6,916,808
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Papolb
poly(A) polymerase beta
ISO
RGD
PMID:24243805
RGD:9681742
NCBI chrNW_004624740:28,451,467...28,457,301
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Papolg
poly(A) polymerase gamma
ISO
RGD
PMID:24243805
RGD:9681742
NCBI chrNW_004624833:1,134,200...1,163,341
Ensembl chrNW_004624833:1,133,462...1,159,684
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Pcf11
PCF11 cleavage and polyadenylation factor subunit
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624845:6,712,401...6,736,778
Ensembl chrNW_004624845:6,712,408...6,736,773
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Sympk
symplekin scaffold protein
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624832:7,351,303...7,394,337
Ensembl chrNW_004624832:7,354,272...7,394,255
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Wdr33
WD repeat domain 33
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624732:14,183,734...14,280,825
Ensembl chrNW_004624732:14,183,132...14,280,795
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Xrn2
5'-3' exoribonuclease 2
ISO
RGD
PMID:21957020
RGD:9681741
NCBI chrNW_004624741:21,691,099...21,768,267
Ensembl chrNW_004624741:21,691,199...21,767,790
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Ncbp1
nuclear cap binding protein subunit 1
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004624825:3,166,895...3,206,444
Ensembl chrNW_004624825:3,164,700...3,206,241
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Ncbp2
nuclear cap binding protein subunit 2
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004624730:61,925,831...61,931,451
Ensembl chrNW_004624730:61,925,831...61,931,385
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Ramac
RNA guanine-7 methyltransferase activating subunit
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004624768:18,760,597...18,765,389
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Rngtt
RNA guanylyltransferase and 5'-phosphatase
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004624799:5,225,293...5,553,957
Ensembl chrNW_004624799:5,225,264...5,554,168
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Rnmt
RNA guanine-7 methyltransferase
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004624770:20,312,555...20,389,099
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Cavin1
caveolae associated protein 1
ISO
RGD
PMID:23092677
RGD:9588249
NCBI chrNW_004624795:1,624,535...1,635,409
Ensembl chrNW_004624795:1,624,373...1,634,292
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Cdc73
cell division cycle 73
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004624814:298,015...460,314
Ensembl chrNW_004624814:299,444...460,391
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Crebbp
CREB binding protein
ISO
RGD
PMID:24022641
RGD:9588250
NCBI chrNW_004624824:1,516,481...1,655,364
Ensembl chrNW_004624824:1,517,966...1,655,329
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Ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004624766:2,823,561...2,851,742
Ensembl chrNW_004624766:2,823,229...2,851,742
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Leo1
LEO1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004624731:8,467,914...8,485,978
Ensembl chrNW_004624731:8,467,877...8,485,851
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Ncl
nucleolin
ISO
RGD
PMID:21893173 PMID:25225127
RGD:9588244 RGD:9588251
NCBI chrNW_004624843:4,620,501...4,630,521
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Paf1
PAF1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004624794:12,719,819...12,725,109
Ensembl chrNW_004624794:12,719,861...12,725,122
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Polr1a
RNA polymerase I subunit A
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624749:17,138,352...17,216,039
Ensembl chrNW_004624749:17,138,476...17,215,124
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Polr1b
RNA polymerase I subunit B
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624749:12,602,078...12,625,200
Ensembl chrNW_004624749:12,602,004...12,625,200
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Polr1c
RNA polymerase I and III subunit C
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624754:16,125,322...16,129,339
Ensembl chrNW_004624754:16,122,935...16,136,395
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Polr1d
RNA polymerase I and III subunit D
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624776:10,872,975...10,874,852
Ensembl chrNW_004624776:10,810,952...10,875,214
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Polr1e
RNA polymerase I subunit E
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624930:1,104,387...1,120,580
Ensembl chrNW_004624930:1,104,311...1,122,077
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Polr1f
RNA polymerase I subunit F
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624739:10,905,010...10,916,141
Ensembl chrNW_004624739:10,904,932...10,917,075
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Polr1g
RNA polymerase I subunit G
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624907:2,286,040...2,288,533
Ensembl chrNW_004624907:2,286,050...2,288,242
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Polr1h
RNA polymerase I subunit H
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624754:25,340,498...25,344,032
Ensembl chrNW_004624754:25,340,155...25,344,380
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Polr2e
RNA polymerase II, I and III subunit E
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624828:7,547,401...7,553,282
Ensembl chrNW_004624828:7,547,460...7,553,282
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Polr2f
RNA polymerase II, I and III subunit F
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624752:9,978,373...9,988,192
Ensembl chrNW_004624752:9,978,273...9,988,134
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Polr2h
RNA polymerase II, I and III subunit H
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624730:72,221,964...72,228,133
Ensembl chrNW_004624730:72,221,964...72,228,616
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Polr2k
RNA polymerase II, I and III subunit K
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624763:7,068,000...7,071,752
Ensembl chrNW_004624763:7,068,012...7,071,799
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Polr2l
RNA polymerase II, I and III subunit L
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004624766:21,678,994...21,680,977
Ensembl chrNW_004624766:21,678,970...21,680,977
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Rrn3
RRN3 homolog, RNA polymerase I transcription factor
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004624824:8,582,754...8,615,073
Ensembl chrNW_004624824:8,582,803...8,614,313
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Rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004624804:8,588,751...8,649,180
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Sirt1
sirtuin 1
ISO
RGD
PMID:24022641
RGD:9588250
NCBI chrNW_004624754:2,304,476...2,332,705
Ensembl chrNW_004624754:2,304,634...2,330,946
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Sirt7
sirtuin 7
ISO
RGD
PMID:24022641
RGD:9588250
NCBI chrNW_004624801:10,753,480...10,760,601
Ensembl chrNW_004624801:10,753,333...10,764,122
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Skic8
SKI8 subunit of superkiller complex
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004624894:2,575,870...2,592,667
Ensembl chrNW_004624894:2,575,916...2,592,666
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Ssrp1
structure specific recognition protein 1
ISO
RGD
PMID:21454601
RGD:9588245
NCBI chrNW_004624864:3,253,639...3,262,105
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Supt16h
SPT16 homolog, facilitates chromatin remodeling subunit
ISO
RGD
PMID:21454601
RGD:9588245
NCBI chrNW_004624825:7,366,448...7,410,847
Ensembl chrNW_004624825:7,367,325...7,410,823
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Supt4h1
SPT4 homolog, DSIF elongation factor subunit
ISO
RGD
PMID:21893173
RGD:9588244
NCBI chrNW_004624871:183,495...189,838
Ensembl chrNW_004624871:184,298...189,798
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Supt5h
SPT5 homolog, DSIF elongation factor subunit
ISO
RGD
PMID:21893173
RGD:9588244
NCBI chrNW_004624794:12,766,734...12,791,590
Ensembl chrNW_004624794:12,766,806...12,804,611
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Taf12
TATA-box binding protein associated factor 12
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004624764:12,401,152...12,444,978
Ensembl chrNW_004624764:12,396,938...12,445,681
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Taf1a
TATA-box binding protein associated factor, RNA polymerase I subunit A
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004624835:5,121,496...5,144,904
Ensembl chrNW_004624835:5,121,299...5,144,732
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Taf1b
TATA-box binding protein associated factor, RNA polymerase I subunit B
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004624865:5,089,425...5,128,228
Ensembl chrNW_004624865:5,088,926...5,128,289
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Taf1c
TATA-box binding protein associated factor, RNA polymerase I subunit C
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004624746:3,403,122...3,412,709
Ensembl chrNW_004624746:3,406,644...3,412,188
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Taf1d
TATA-box binding protein associated factor, RNA polymerase I subunit D
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004624735:38,397,922...38,407,255
Ensembl chrNW_004624735:38,402,356...38,405,172
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Tbp
TATA-box binding protein
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004624850:6,359,382...6,375,391
Ensembl chrNW_004624850:6,359,418...6,375,391
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Ttf1
transcription termination factor 1
ISO
RGD
PMID:23092677
RGD:9588249
NCBI chrNW_004624760:3,893,665...3,918,237
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Ubtf
upstream binding transcription factor
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004624795:768,627...779,174
Ensembl chrNW_004624795:768,697...780,639
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Aff1
ALF transcription elongation factor 1
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004624872:3,486,242...3,656,089
Ensembl chrNW_004624872:3,486,135...3,651,098
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Aff4
ALF transcription elongation factor 4
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004624733:39,126,483...39,226,969
Ensembl chrNW_004624733:39,123,575...39,221,424
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Ccnk
cyclin K
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624734:4,366,884...4,392,934
Ensembl chrNW_004624734:4,367,396...4,383,419
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Ccnt1
cyclin T1
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624816:3,396,740...3,445,976
Ensembl chrNW_004624816:3,421,709...3,442,170
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Ccnt2
cyclin T2
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624732:34,307,124...34,357,354
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Cdc73
cell division cycle 73
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004624814:298,015...460,314
Ensembl chrNW_004624814:299,444...460,391
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Cdk9
cyclin dependent kinase 9
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624760:7,760,474...7,765,711
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Ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004624766:2,823,561...2,851,742
Ensembl chrNW_004624766:2,823,229...2,851,742
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Eaf1
ELL associated factor 1
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004624822:5,240,423...5,253,762
Ensembl chrNW_004624822:5,239,964...5,253,810
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Eaf2
ELL associated factor 2
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004624912:112,793...168,553
Ensembl chrNW_004624912:112,843...168,553
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Ell
elongation factor for RNA polymerase II
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004624908:1,665,407...1,709,509
Ensembl chrNW_004624908:1,666,647...1,709,425
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Ell2
elongation factor for RNA polymerase II 2
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004624743:14,515,727...14,583,805
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Ell3
elongation factor for RNA polymerase II 3
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004624804:10,784,575...10,789,838
Ensembl chrNW_004624804:10,786,900...10,789,766
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Gtf2f1
general transcription factor IIF subunit 1
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624828:3,512,990...3,521,848
Ensembl chrNW_004624828:3,513,027...3,521,650
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Gtf2f2
general transcription factor IIF subunit 2
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624748:9,703,846...9,863,320
Ensembl chrNW_004624748:9,703,846...9,863,300
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Leo1
LEO1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004624731:8,467,914...8,485,978
Ensembl chrNW_004624731:8,467,877...8,485,851
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Mllt1
MLLT1 super elongation complex subunit
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004624828:4,055,244...4,110,246
Ensembl chrNW_004624828:4,093,502...4,110,350
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Mllt3
MLLT3 super elongation complex subunit
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004624736:24,298,750...24,586,185
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Ncbp1
nuclear cap binding protein subunit 1
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004624825:3,166,895...3,206,444
Ensembl chrNW_004624825:3,164,700...3,206,241
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Ncbp2
nuclear cap binding protein subunit 2
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004624730:61,925,831...61,931,451
Ensembl chrNW_004624730:61,925,831...61,931,385
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Nelfa
negative elongation factor complex member A
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624755:25,498,336...25,508,753
Ensembl chrNW_004624755:25,498,431...25,508,753
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Nelfb
negative elongation factor complex member B
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624760:692,735...703,571
Ensembl chrNW_004624760:692,735...705,328
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Nelfcd
negative elongation factor complex member C/D
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624741:25,267,334...25,280,844
Ensembl chrNW_004624741:25,267,359...25,280,844
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Nelfe
negative elongation factor complex member E
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624754:24,300,012...24,310,777
Ensembl chrNW_004624754:24,300,602...24,310,671
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Paf1
PAF1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004624794:12,719,819...12,725,109
Ensembl chrNW_004624794:12,719,861...12,725,122
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Rngtt
RNA guanylyltransferase and 5'-phosphatase
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004624799:5,225,293...5,553,957
Ensembl chrNW_004624799:5,225,264...5,554,168
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Rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004624804:8,588,751...8,649,180
G
Skic8
SKI8 subunit of superkiller complex
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004624894:2,575,870...2,592,667
Ensembl chrNW_004624894:2,575,916...2,592,666
G
Ssrp1
structure specific recognition protein 1
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624864:3,253,639...3,262,105
G
Supt16h
SPT16 homolog, facilitates chromatin remodeling subunit
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624825:7,366,448...7,410,847
Ensembl chrNW_004624825:7,367,325...7,410,823
G
Supt4h1
SPT4 homolog, DSIF elongation factor subunit
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624871:183,495...189,838
Ensembl chrNW_004624871:184,298...189,798
G
Supt5h
SPT5 homolog, DSIF elongation factor subunit
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624794:12,766,734...12,791,590
Ensembl chrNW_004624794:12,766,806...12,804,611
G
Tcea1
transcription elongation factor A1
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624735:1,637,453...1,700,839
Ensembl chrNW_004624735:1,637,465...1,704,154
G
Tcea2
transcription elongation factor A2
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624741:29,691,983...29,699,383
Ensembl chrNW_004624741:29,692,006...29,699,383
G
Tcea3
transcription elongation factor A3
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004624764:8,020,241...8,072,052
G
Atxn7
ataxin 7
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624888:1,910,385...2,045,038
Ensembl chrNW_004624888:1,914,063...1,999,755
G
Atxn7l3
ataxin 7 like 3
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624795:787,177...792,759
G
Ccnh
cyclin H
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004624743:6,883,124...6,902,518
Ensembl chrNW_004624743:6,883,114...6,902,745
G
Cdk7
cyclin dependent kinase 7
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004624905:123,365...175,776
Ensembl chrNW_004624905:123,318...176,168
G
Dr1
down-regulator of transcription 1
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624742:4,263,288...4,282,097
Ensembl chrNW_004624742:4,263,288...4,282,609
G
Eny2
ENY2 transcription and export complex 2 subunit
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624763:8,423,647...8,433,772
Ensembl chrNW_004624763:8,423,730...8,433,772
G
Ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004624907:2,249,323...2,263,999
Ensembl chrNW_004624907:2,250,133...2,263,947
G
Ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004624732:13,730,648...13,776,886
Ensembl chrNW_004624732:13,729,947...13,776,870
G
Ercc5
ERCC excision repair 5, endonuclease
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004624793:8,632,581...8,657,514
Ensembl chrNW_004624793:8,632,471...8,657,346
G
Gtf2a1
general transcription factor IIA subunit 1
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004624734:20,795,550...20,830,602
Ensembl chrNW_004624734:20,795,474...20,831,234
G
Gtf2a2
general transcription factor IIA subunit 2
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004624781:12,498,057...12,510,701
Ensembl chrNW_004624781:12,498,702...12,512,810
G
Gtf2b
general transcription factor IIB
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004624742:8,687,002...8,721,505
Ensembl chrNW_004624742:8,686,537...8,723,399
G
Gtf2e1
general transcription factor IIE subunit 1
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004624731:27,453,525...27,484,844
Ensembl chrNW_004624731:27,453,531...27,484,819
G
Gtf2e2
general transcription factor IIE subunit 2
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004624839:7,248,183...7,328,582
Ensembl chrNW_004624839:7,247,596...7,329,480
G
Gtf2f1
general transcription factor IIF subunit 1
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004624828:3,512,990...3,521,848
Ensembl chrNW_004624828:3,513,027...3,521,650
G
Gtf2f2
general transcription factor IIF subunit 2
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004624748:9,703,846...9,863,320
Ensembl chrNW_004624748:9,703,846...9,863,300
G
Gtf2h1
general transcription factor IIH subunit 1
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004624766:9,807,973...9,848,167
Ensembl chrNW_004624766:9,808,170...9,848,173
G
Gtf2h2
general transcription factor IIH subunit 2
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004624905:395,922...421,203
G
Gtf2h3
general transcription factor IIH subunit 3
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004624747:23,422,289...23,437,193
Ensembl chrNW_004624747:23,422,319...23,435,926
G
Gtf2h4
general transcription factor IIH subunit 4
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004624754:24,871,006...24,876,957
Ensembl chrNW_004624754:24,871,008...24,877,436
G
Gtf2h5
general transcription factor IIH subunit 5
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004624785:70,425...82,098
Ensembl chrNW_004624785:69,978...82,012
G
Hcfc2
host cell factor C2
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624750:4,627,848...4,660,448
Ensembl chrNW_004624750:4,629,669...4,660,413
G
Kat14
lysine acetyltransferase 14
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624741:19,044,033...19,077,163
Ensembl chrNW_004624741:19,043,628...19,077,450
G
Kat2a
lysine acetyltransferase 2A
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624795:1,782,367...1,787,408
Ensembl chrNW_004624795:1,782,366...1,788,951
G
Kat2b
lysine acetyltransferase 2B
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624821:5,387,212...5,489,013
G
Mbip
MAP3K12 binding inhibitory protein 1
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624838:508,660...527,306
Ensembl chrNW_004624838:508,732...528,161
G
Mnat1
MNAT1 component of CDK activating kinase
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004624734:40,148,761...40,389,233
Ensembl chrNW_004624734:40,154,577...40,389,402
G
Pole3
DNA polymerase epsilon 3, accessory subunit
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624760:21,692,734...21,695,636
Ensembl chrNW_004624760:21,692,715...21,695,826
G
Sgf29
SAGA complex associated factor 29
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624782:13,054,643...13,076,640
Ensembl chrNW_004624782:13,054,343...13,072,515
G
Supt20h
SPT20 homolog, SAGA complex component
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624776:185,196...223,316
Ensembl chrNW_004624776:185,095...223,325
G
Supt3h
SPT3 homolog, SAGA and STAGA complex component
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624754:14,823,331...15,236,032
G
Supt7l
SPT7 like, STAGA complex subunit gamma
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624738:9,673,966...9,684,706
Ensembl chrNW_004624738:9,675,056...9,682,685
G
Tada1
transcriptional adaptor 1
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624826:4,920,364...4,940,982
Ensembl chrNW_004624826:4,920,372...4,941,368
G
Tada2a
transcriptional adaptor 2A
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624871:4,412,703...4,478,275
Ensembl chrNW_004624871:4,415,409...4,469,359
G
Tada2b
transcriptional adaptor 2B
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624755:23,262,693...23,272,531
Ensembl chrNW_004624755:23,262,687...23,272,522
G
Tada3
transcriptional adaptor 3
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624731:4,409,550...4,420,498
Ensembl chrNW_004624731:4,408,918...4,419,545
G
Taf1
TATA-box binding protein associated factor 1
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004624903:1,698,201...1,774,607
G
Taf10
TATA-box binding protein associated factor 10
ISO
RGD
PMID:22426530 PMID:23146842
RGD:9681723 RGD:9681728
NCBI chrNW_004624817:8,103,065...8,104,435
Ensembl chrNW_004624817:8,103,065...8,104,420
G
Taf11
TATA-box binding protein associated factor 11
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004624754:22,463,406...22,471,197
Ensembl chrNW_004624754:22,463,441...22,471,192
G
Taf12
TATA-box binding protein associated factor 12
ISO
RGD
PMID:22426530 PMID:23146842
RGD:9681723 RGD:9681728
NCBI chrNW_004624764:12,401,152...12,444,978
Ensembl chrNW_004624764:12,396,938...12,445,681
G
Taf13
TATA-box binding protein associated factor 13
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004624772:4,829,110...4,841,661
Ensembl chrNW_004624772:4,827,514...4,841,646
G
Taf15
TATA-box binding protein associated factor 15
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004624875:3,278,055...3,311,915
G
Taf2
TATA-box binding protein associated factor 2
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004624763:17,801,835...17,907,538
Ensembl chrNW_004624763:17,806,280...17,907,547
G
Taf3
TATA-box binding protein associated factor 3
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004624775:2,791,406...2,958,886
Ensembl chrNW_004624775:2,791,610...2,959,236
G
Taf4
TATA-box binding protein associated factor 4
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004624741:27,881,850...27,948,543
Ensembl chrNW_004624741:27,883,183...27,909,304
G
Taf5
TATA-box binding protein associated factor 5
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004624831:2,608,972...2,625,036
Ensembl chrNW_004624831:2,609,819...2,625,182
G
Taf5l
TATA-box binding protein associated factor 5 like
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624775:19,496,924...19,525,495
Ensembl chrNW_004624775:19,496,986...19,525,489
G
Taf6
TATA-box binding protein associated factor 6
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004624740:16,877,535...16,883,742
Ensembl chrNW_004624740:16,877,619...16,883,742
G
Taf6l
TATA-box binding protein associated factor 6 like
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624926:1,231,127...1,245,178
Ensembl chrNW_004624926:1,236,154...1,247,836
G
Taf7
TATA-box binding protein associated factor 7
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004624774:548,072...550,410
Ensembl chrNW_004624774:548,072...550,404
G
Taf8
TATA-box binding protein associated factor 8
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004624754:17,136,791...17,147,991
Ensembl chrNW_004624754:17,135,101...17,147,982
G
Taf9
TATA-box binding protein associated factor 9
ISO
RGD
PMID:22426530 PMID:23146842
RGD:9681723 RGD:9681728
NCBI chrNW_004624905:240,760...244,656
Ensembl chrNW_004624905:240,760...244,656
G
Tbp
TATA-box binding protein
ISO
RGD
PMID:23146842 PMID:24120742
RGD:9681721 RGD:9681723
NCBI chrNW_004624850:6,359,382...6,375,391
Ensembl chrNW_004624850:6,359,418...6,375,391
G
Trrap
transformation/transcription domain associated protein
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624740:32,349,521...32,472,240
Ensembl chrNW_004624740:32,349,568...32,472,308
G
Usp22
ubiquitin specific peptidase 22
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624849:4,516,849...4,557,656
Ensembl chrNW_004624849:4,515,584...4,557,972
G
Wdr5
WD repeat domain 5
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624760:2,275,660...2,291,796
Ensembl chrNW_004624760:2,274,813...2,292,379
G
Yeats2
YEATS domain containing 2
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624730:72,693,216...72,781,611
Ensembl chrNW_004624730:72,693,218...72,781,276
G
Zzz3
zinc finger ZZ-type containing 3
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004624742:19,515,291...19,630,055
Ensembl chrNW_004624742:19,562,574...19,625,049
G
Ccnc
cyclin C
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624810:5,466,972...5,485,932
Ensembl chrNW_004624810:5,466,981...5,485,930
G
Cdc14a
cell division cycle 14A
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004624857:3,246,027...3,416,536
Ensembl chrNW_004624857:3,245,934...3,417,199
G
Cdc14b
cell division cycle 14B
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004624753:17,941,852...18,040,542
Ensembl chrNW_004624753:17,942,049...18,040,542
G
Cdk12
cyclin dependent kinase 12
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004624795:3,490,081...3,564,144
Ensembl chrNW_004624795:3,512,429...3,562,515
G
Cdk19
cyclin dependent kinase 19
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624916:1,625,330...1,812,026
Ensembl chrNW_004624916:1,625,073...1,812,296
G
Cdk7
cyclin dependent kinase 7
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004624905:123,365...175,776
Ensembl chrNW_004624905:123,318...176,168
G
Cdk8
cyclin dependent kinase 8
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720 PMID:24088064
RGD:9681732 RGD:9681737 RGD:9681738
NCBI chrNW_004624776:12,114,277...12,324,481
Ensembl chrNW_004624776:12,157,892...12,325,081
G
Cdk9
cyclin dependent kinase 9
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004624760:7,760,474...7,765,711
G
Ctdp1
CTD phosphatase subunit 1
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004624806:621,087...720,044
Ensembl chrNW_004624806:621,804...719,942
G
Ctdsp1
CTD small phosphatase 1
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004624823:6,603,095...6,608,490
Ensembl chrNW_004624823:6,601,919...6,608,552
G
Med1
mediator complex subunit 1
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624795:3,572,025...3,605,675
Ensembl chrNW_004624795:3,572,266...3,607,126
G
Med10
mediator complex subunit 10
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624751:4,136,615...4,141,959
Ensembl chrNW_004624751:4,136,776...4,141,949
G
Med11
mediator complex subunit 11
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624786:8,586,222...8,590,121
Ensembl chrNW_004624786:8,586,321...8,588,273
G
Med12
mediator complex subunit 12
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624903:1,412,346...1,436,474
Ensembl chrNW_004624903:1,412,474...1,436,474
G
Med12l
mediator complex subunit 12L
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624730:28,548,450...28,862,632
Ensembl chrNW_004624730:28,548,421...28,858,782
G
Med13
mediator complex subunit 13
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624871:1,886,650...1,983,165
Ensembl chrNW_004624871:1,886,688...1,980,105
G
Med13l
mediator complex subunit 13L
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624747:16,810,123...17,120,758
Ensembl chrNW_004624747:16,810,076...17,118,088
G
Med14
mediator complex subunit 14
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624762:14,832,485...14,903,119
Ensembl chrNW_004624762:14,832,816...14,904,882
G
Med15
mediator complex subunit 15
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624945:488,396...562,084
G
Med16
mediator complex subunit 16
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624828:7,695,401...7,713,603
Ensembl chrNW_004624828:7,695,316...7,713,603
G
Med17
mediator complex subunit 17
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624735:38,427,854...38,450,625
Ensembl chrNW_004624735:38,427,918...38,451,198
G
Med18
mediator complex subunit 18
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624764:12,155,852...12,163,441
Ensembl chrNW_004624764:12,155,739...12,162,994
G
Med19
mediator complex subunit 19
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624864:3,014,489...3,027,784
Ensembl chrNW_004624864:3,021,178...3,025,877
G
Med20
mediator complex subunit 20
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624754:17,204,913...17,218,993
Ensembl chrNW_004624754:17,204,841...17,221,480
G
Med21
mediator complex subunit 21
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624752:12,168,004...12,173,980
Ensembl chrNW_004624752:12,168,004...12,174,058
G
Med22
mediator complex subunit 22
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624760:1,805,806...1,811,514
Ensembl chrNW_004624760:1,805,806...1,811,532
G
Med23
mediator complex subunit 23
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624753:5,751,782...5,799,305
Ensembl chrNW_004624753:5,751,779...5,799,413
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Med24
mediator complex subunit 24
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624795:3,140,340...3,161,930
Ensembl chrNW_004624795:3,140,216...3,162,054
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Med25
mediator complex subunit 25
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624832:4,483,599...4,503,937
Ensembl chrNW_004624832:4,484,359...4,503,863
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Med26
mediator complex subunit 26
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624908:870,181...912,685
Ensembl chrNW_004624908:870,488...911,747
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Med27
mediator complex subunit 27
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624760:4,137,897...4,324,173
Ensembl chrNW_004624760:4,137,858...4,324,266
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Med28
mediator complex subunit 28
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624755:14,225,597...14,236,814
Ensembl chrNW_004624755:14,227,819...14,236,775
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Med29
mediator complex subunit 29
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624794:12,724,839...12,732,160
Ensembl chrNW_004624794:12,725,344...12,728,710
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Med30
mediator complex subunit 30
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624763:15,831,359...15,847,761
Ensembl chrNW_004624763:15,831,456...15,848,636
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Med31
mediator complex subunit 31
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624786:7,388,621...7,395,177
Ensembl chrNW_004624786:7,388,698...7,395,169
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Med4
mediator complex subunit 4
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624748:6,770,231...6,790,385
G
Med6
mediator complex subunit 6
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624734:30,604,314...30,621,116
Ensembl chrNW_004624734:30,604,254...30,621,213
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Med7
mediator complex subunit 7
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624733:32,256,067...32,260,501
Ensembl chrNW_004624733:32,256,116...32,259,792
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Med8
mediator complex subunit 8
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624892:2,697,897...2,704,162
Ensembl chrNW_004624892:2,698,557...2,703,865
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Med9
mediator complex subunit 9
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004624849:3,920,046...3,934,748
Ensembl chrNW_004624849:3,920,268...3,934,777
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Polr2a
RNA polymerase II subunit A
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004624786:10,098,133...10,122,783
Ensembl chrNW_004624786:10,097,294...10,122,893
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Polr2b
RNA polymerase II subunit B
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004624761:12,387,553...12,430,211
Ensembl chrNW_004624761:12,387,553...12,430,871
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Polr2c
RNA polymerase II subunit C
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004624746:28,604,098...28,612,975
Ensembl chrNW_004624746:28,604,098...28,613,006
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Polr2d
RNA polymerase II subunit D
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004624732:14,294,694...14,308,843
Ensembl chrNW_004624732:14,295,113...14,308,826
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Polr2e
RNA polymerase II, I and III subunit E
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004624828:7,547,401...7,553,282
Ensembl chrNW_004624828:7,547,460...7,553,282
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Polr2f
RNA polymerase II, I and III subunit F
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004624752:9,978,373...9,988,192
Ensembl chrNW_004624752:9,978,273...9,988,134
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Polr2g
RNA polymerase II subunit G
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004624926:1,228,590...1,230,943
Ensembl chrNW_004624926:1,228,602...1,230,943
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Polr2h
RNA polymerase II, I and III subunit H
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004624730:72,221,964...72,228,133
Ensembl chrNW_004624730:72,221,964...72,228,616
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Polr2i
RNA polymerase II subunit I
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004624794:10,359,984...10,361,472
Ensembl chrNW_004624794:10,359,984...10,361,826
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Polr2j
RNA polymerase II subunit J
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004624740:15,169,414...15,174,212
Ensembl chrNW_004624740:15,169,459...15,173,805
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Polr2k
RNA polymerase II, I and III subunit K
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004624763:7,068,000...7,071,752
Ensembl chrNW_004624763:7,068,012...7,071,799
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Polr2l
RNA polymerase II, I and III subunit L
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004624766:21,678,994...21,680,977
Ensembl chrNW_004624766:21,678,970...21,680,977
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Rpap2
RNA polymerase II associated protein 2
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004624742:5,338,997...5,434,936
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Ssu72
SSU72 homolog, RNA polymerase II CTD phosphatase
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004624818:8,147,173...8,177,682
Ensembl chrNW_004624818:8,147,185...8,177,684
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Clp1
cleavage factor polyribonucleotide kinase subunit 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624864:3,063,555...3,067,045
Ensembl chrNW_004624864:3,063,555...3,067,051
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Cpsf1
cleavage and polyadenylation specific factor 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624735:12,444,371...12,457,864
Ensembl chrNW_004624735:12,444,386...12,457,864
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Cpsf2
cleavage and polyadenylation specific factor 2
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624734:8,737,023...8,769,088
Ensembl chrNW_004624734:8,736,911...8,768,583
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Cpsf3
cleavage and polyadenylation specific factor 3
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624969:265,457...290,514
Ensembl chrNW_004624969:265,117...290,361
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Cpsf4
cleavage and polyadenylation specific factor 4
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624740:32,860,217...32,876,878
Ensembl chrNW_004624740:32,860,137...32,876,878
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Cpsf6
cleavage and polyadenylation specific factor 6
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624948:53,317...83,983
Ensembl chrNW_004624948:56,246...84,051
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Cpsf7
cleavage and polyadenylation specific factor 7
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624926:802,033...822,372
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Cstf1
cleavage stimulation factor subunit 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624790:133,872...143,762
Ensembl chrNW_004624790:132,023...144,363
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Cstf2
cleavage stimulation factor subunit 2
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624902:1,755,308...1,780,826
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Cstf2t
cleavage stimulation factor subunit 2 tau variant
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624791:11,924,945...11,929,106
Ensembl chrNW_004624791:11,925,197...11,927,188
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Cstf3
cleavage stimulation factor subunit 3
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624767:14,071,196...14,144,758
Ensembl chrNW_004624767:14,071,392...14,144,258
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Dxo
decapping exoribonuclease
ISO
RGD
PMID:21957020
RGD:9681741
NCBI chrNW_004624754:24,281,099...24,283,403
Ensembl chrNW_004624754:24,281,101...24,287,647
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Fip1l1
factor interacting with PAPOLA and CPSF1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624761:16,067,962...16,145,116
Ensembl chrNW_004624761:16,071,097...16,145,052
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Nudt21
nudix hydrolase 21
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624757:115,249...130,775
Ensembl chrNW_004624757:114,844...130,097
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Pcf11
PCF11 cleavage and polyadenylation factor subunit
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624845:6,712,401...6,736,778
Ensembl chrNW_004624845:6,712,408...6,736,773
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Sympk
symplekin scaffold protein
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624832:7,351,303...7,394,337
Ensembl chrNW_004624832:7,354,272...7,394,255
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Wdr33
WD repeat domain 33
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004624732:14,183,734...14,280,825
Ensembl chrNW_004624732:14,183,132...14,280,795
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Xrn2
5'-3' exoribonuclease 2
ISO
RGD
PMID:21957020
RGD:9681741
NCBI chrNW_004624741:21,691,099...21,768,267
Ensembl chrNW_004624741:21,691,199...21,767,790
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Bdp1
BDP1 general transcription factor IIIB subunit
ISO
RGD
PMID:20890107 PMID:23031840
RGD:9588284 RGD:9685218
NCBI chrNW_004624905:525,302...637,951
Ensembl chrNW_004624905:524,880...638,237
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Brf1
BRF1 general transcription factor IIIB subunit
ISO
RGD
PMID:20890107 PMID:23031840
RGD:9588284 RGD:9685218
NCBI chrNW_004624734:213,536...280,816
Ensembl chrNW_004624734:213,895...279,777
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Brf2
BRF2 general transcription factor IIIB subunit
ISO
RGD
PMID:20890107 PMID:23031840
RGD:9588284 RGD:9685218
NCBI chrNW_004624780:5,752,018...5,757,323
Ensembl chrNW_004624780:5,751,435...5,757,447
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Crcp
CGRP receptor component
ISO
RGD
PMID:12391170
RGD:9685217
NCBI chrNW_004624740:8,431,986...8,470,264
Ensembl chrNW_004624740:8,431,970...8,469,765
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Gtf3a
general transcription factor IIIA
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004624776:11,070,662...11,079,870
Ensembl chrNW_004624776:11,071,065...11,079,663
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Gtf3c1
general transcription factor IIIC subunit 1
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004624782:12,073,895...12,141,397
Ensembl chrNW_004624782:12,074,781...12,141,315
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Gtf3c2
general transcription factor IIIC subunit 2
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004624738:9,410,457...9,435,442
Ensembl chrNW_004624738:9,410,925...9,435,156
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Gtf3c3
general transcription factor IIIC subunit 3
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004624854:333,507...362,324
Ensembl chrNW_004624854:333,602...360,994
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Gtf3c4
general transcription factor IIIC subunit 4
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004624760:3,666,442...3,692,077
Ensembl chrNW_004624760:3,673,769...3,692,407
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Gtf3c5
general transcription factor IIIC subunit 5
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004624760:3,402,718...3,415,925
Ensembl chrNW_004624760:3,400,224...3,415,929
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Gtf3c6
general transcription factor IIIC subunit 6
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004624916:1,916,483...1,925,334
Ensembl chrNW_004624916:1,916,619...1,925,260
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Maf1
MAF1 homolog, negative regulator of RNA polymerase III
ISO
RGD
PMID:23031840 PMID:23165150
RGD:9588284 RGD:9685221
NCBI chrNW_004624735:12,715,888...12,719,058
Ensembl chrNW_004624735:12,714,959...12,718,361
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Polr1c
RNA polymerase I and III subunit C
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624754:16,125,322...16,129,339
Ensembl chrNW_004624754:16,122,935...16,136,395
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Polr1d
RNA polymerase I and III subunit D
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624776:10,872,975...10,874,852
Ensembl chrNW_004624776:10,810,952...10,875,214
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Polr2e
RNA polymerase II, I and III subunit E
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624828:7,547,401...7,553,282
Ensembl chrNW_004624828:7,547,460...7,553,282
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Polr2f
RNA polymerase II, I and III subunit F
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624752:9,978,373...9,988,192
Ensembl chrNW_004624752:9,978,273...9,988,134
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Polr2h
RNA polymerase II, I and III subunit H
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624730:72,221,964...72,228,133
Ensembl chrNW_004624730:72,221,964...72,228,616
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Polr2k
RNA polymerase II, I and III subunit K
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624763:7,068,000...7,071,752
Ensembl chrNW_004624763:7,068,012...7,071,799
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Polr2l
RNA polymerase II, I and III subunit L
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624766:21,678,994...21,680,977
Ensembl chrNW_004624766:21,678,970...21,680,977
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Polr3a
RNA polymerase III subunit A
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624754:11,166,126...11,215,205
Ensembl chrNW_004624754:11,173,601...11,215,258
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Polr3b
RNA polymerase III subunit B
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624750:2,906,041...3,004,241
Ensembl chrNW_004624750:2,905,747...3,004,237
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Polr3c
RNA polymerase III subunit C
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624772:17,196,418...17,212,265
Ensembl chrNW_004624772:17,196,388...17,212,727
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Polr3d
RNA polymerase III subunit D
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624758:17,817,716...17,823,442
Ensembl chrNW_004624758:17,817,690...17,824,427
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Polr3e
RNA polymerase III subunit E
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624782:7,673,172...7,701,591
Ensembl chrNW_004624782:7,673,451...7,702,007
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Polr3f
RNA polymerase III subunit F
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624741:19,196,639...19,213,252
Ensembl chrNW_004624741:19,196,605...19,210,403
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Polr3g
RNA polymerase III subunit G
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624743:9,733,372...9,765,967
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Polr3gl
RNA polymerase III subunit GL
ISO
RGD
PMID:20890107
RGD:9685218
NCBI chrNW_004624772:17,320,090...17,328,492
Ensembl chrNW_004624772:17,281,782...17,328,628
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Polr3h
RNA polymerase III subunit H
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624752:7,066,057...7,074,251
Ensembl chrNW_004624752:7,066,073...7,074,251
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Polr3k
RNA polymerase III subunit K
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004624913:928,871...934,876
Ensembl chrNW_004624913:929,627...935,346
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Pou2f1
POU class 2 homeobox 1
ISO
RGD
PMID:20890107
RGD:9685218
NCBI chrNW_004624826:5,334,365...5,501,421
Ensembl chrNW_004624826:5,334,366...5,493,821
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Rb1
RB transcriptional corepressor 1
ISO
RGD
PMID:23063750
RGD:9685222
NCBI chrNW_004624748:6,358,588...6,533,217
Ensembl chrNW_004624748:6,358,180...6,533,249
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Snapc1
small nuclear RNA activating complex polypeptide 1
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004624734:39,374,679...39,412,011
Ensembl chrNW_004624734:39,374,955...39,397,970
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Snapc2
small nuclear RNA activating complex polypeptide 2
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004624828:882,370...885,866
Ensembl chrNW_004624828:883,194...885,408
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Snapc3
small nuclear RNA activating complex polypeptide 3
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004624736:19,569,562...19,609,950
Ensembl chrNW_004624736:19,569,577...19,612,907
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Snapc4
small nuclear RNA activating complex polypeptide 4
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004624760:1,542,979...1,561,164
Ensembl chrNW_004624760:1,543,498...1,561,178
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Snapc5
small nuclear RNA activating complex polypeptide 5
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004624781:6,216,255...6,222,439
Ensembl chrNW_004624781:6,216,277...6,222,282
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Sub1
SUB1 regulator of transcription
ISO
RGD
PMID:23128323 PMID:23165150
RGD:9685220 RGD:9685221
NCBI chrNW_004624759:22,010,097...22,027,807
Ensembl chrNW_004624759:22,009,266...22,037,394
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Tbp
TATA-box binding protein
ISO
RGD
PMID:20890107 PMID:23031840
RGD:9588284 RGD:9685218
NCBI chrNW_004624850:6,359,382...6,375,391
Ensembl chrNW_004624850:6,359,418...6,375,391
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Znf143
zinc finger protein 143
ISO
RGD
PMID:20890107
RGD:9685218
NCBI chrNW_004624766:1,604,118...1,662,843
Ensembl chrNW_004624766:1,604,783...1,662,595
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Aar2
AAR2 splicing factor
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chrNW_004624842:3,233,836...3,255,409
Ensembl chrNW_004624842:3,232,085...3,255,813
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Aqr
aquarius intron-binding spliceosomal factor
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624804:2,080,295...2,172,643
Ensembl chrNW_004624804:2,083,341...2,173,208
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Bcas2
BCAS2 pre-mRNA processing factor
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624772:10,210,505...10,224,705
Ensembl chrNW_004624772:10,214,000...10,224,712
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Bud31
BUD31 homolog
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624740:32,833,010...32,841,018
Ensembl chrNW_004624740:32,833,370...32,841,018
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Ccdc12
coiled-coil domain containing 12
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624730:74,307,144...74,354,904
Ensembl chrNW_004624730:74,308,926...74,354,904
G
Cdc5l
cell division cycle 5 like
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624754:15,477,188...15,517,656
Ensembl chrNW_004624754:15,477,193...15,517,636
G
Crnkl1
crooked neck pre-mRNA splicing factor 1
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624741:20,565,686...20,581,708
Ensembl chrNW_004624741:20,564,474...20,581,716
G
Ctnnbl1
catenin beta like 1
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624842:1,764,763...1,949,691
Ensembl chrNW_004624842:1,764,067...1,949,787
G
Cwc15
CWC15 spliceosome associated protein homolog
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624735:39,629,120...39,640,059
Ensembl chrNW_004624735:39,626,956...39,663,347
G
Ddx23
DEAD-box helicase 23
ISO
RGD
PMID:19239890 PMID:23454554
RGD:9686089 RGD:9686093
NCBI chrNW_004624816:3,320,218...3,334,198
Ensembl chrNW_004624816:3,320,065...3,334,559
G
Ddx39b
DExD-box helicase 39B
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chrNW_004624754:24,657,019...24,667,225
Ensembl chrNW_004624754:24,657,914...24,667,579
G
Ddx42
DEAD-box helicase 42
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624849:1,274,453...1,342,078
Ensembl chrNW_004624849:1,274,453...1,341,232
G
Ddx46
DEAD-box helicase 46
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chrNW_004624733:12,229,562...12,294,301
Ensembl chrNW_004624733:12,230,678...12,294,258
G
Dhx15
DEAH-box helicase 15
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chrNW_004624755:7,729,985...7,780,263
Ensembl chrNW_004624755:7,728,027...7,783,784
G
Dhx16
DEAH-box helicase 16
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chrNW_004624754:25,040,684...25,054,632
Ensembl chrNW_004624754:25,040,711...25,057,856
G
Dhx38
DEAH-box helicase 38
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chrNW_004624746:14,301,921...14,319,649
Ensembl chrNW_004624746:14,301,922...14,337,152
G
Dhx8
DEAH-box helicase 8
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chrNW_004624795:1,092,040...1,117,888
Ensembl chrNW_004624795:1,092,040...1,117,859
G
Eftud2
elongation factor Tu GTP binding domain containing 2
ISO
RGD
PMID:23454554 PMID:23592432
RGD:9686090 RGD:9686093
NCBI chrNW_004624795:407,228...435,578
Ensembl chrNW_004624795:407,598...438,734
G
Eif4a3
eukaryotic translation initiation factor 4A3
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chrNW_004624801:9,240,780...9,250,864
Ensembl chrNW_004624801:9,240,780...9,250,863
G
Hnrnpa0
heterogeneous nuclear ribonucleoprotein A0
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624733:9,265,784...9,271,559
Ensembl chrNW_004624733:9,266,607...9,267,527
G
Hnrnpa1
heterogeneous nuclear ribonucleoprotein A1
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624904:2,314,197...2,320,900
Ensembl chrNW_004624904:2,314,249...2,318,791
G
Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624739:4,343,164...4,353,123
Ensembl chrNW_004624739:4,343,246...4,352,066
G
Hnrnpa3
heterogeneous nuclear ribonucleoprotein A3
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624787:14,341,133...14,352,152
Ensembl chrNW_004624787:14,341,250...14,346,316
G
Hnrnpab
heterogeneous nuclear ribonucleoprotein A/B
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624733:41,387,068...41,403,701
Ensembl chrNW_004624733:41,398,123...41,403,617
G
Hnrnpc
heterogeneous nuclear ribonucleoprotein C
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624825:7,198,387...7,276,936
Ensembl chrNW_004624825:7,205,292...7,276,889
G
Hnrnpd
heterogeneous nuclear ribonucleoprotein D
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624757:8,532,373...8,549,840
Ensembl chrNW_004624757:8,531,601...8,549,835
G
Hnrnph1
heterogeneous nuclear ribonucleoprotein H1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624733:42,538,286...42,547,911
Ensembl chrNW_004624733:42,538,159...42,548,249
G
Hnrnph3
heterogeneous nuclear ribonucleoprotein H3
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624754:2,696,464...2,709,280
G
Hnrnpk
heterogeneous nuclear ribonucleoprotein K
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624809:7,538,568...7,548,272
G
Hnrnpl
heterogeneous nuclear ribonucleoprotein L
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624794:12,206,278...12,220,679
Ensembl chrNW_004624794:12,206,252...12,218,173
G
Hnrnpm
heterogeneous nuclear ribonucleoprotein M
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624828:1,199,048...1,250,887
G
Hnrnpr
heterogeneous nuclear ribonucleoprotein R
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624764:7,956,789...7,992,449
Ensembl chrNW_004624764:7,957,395...7,992,398
G
Hnrnpu
heterogeneous nuclear ribonucleoprotein U
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832
G
Hspa8
heat shock protein family A (Hsp70) member 8
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624880:2,070,410...2,075,069
Ensembl chrNW_004624880:2,070,523...2,079,421
G
Isy1
ISY1 splicing factor homolog
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624943:968,193...984,683
G
Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624754:24,425,503...24,429,916
Ensembl chrNW_004624754:24,425,463...24,429,916
G
Lsm3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624872:1,428,885...1,438,633
Ensembl chrNW_004624872:1,428,073...1,438,563
G
Lsm4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624908:1,595,877...1,603,075
Ensembl chrNW_004624908:1,595,877...1,603,043
G
Lsm5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624896:3,079,167...3,083,380
Ensembl chrNW_004624896:3,079,196...3,083,433
G
Lsm6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624853:5,044,893...5,082,578
Ensembl chrNW_004624853:5,044,909...5,059,136
G
Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624828:6,576,672...6,584,303
Ensembl chrNW_004624828:6,576,708...6,584,303
G
Lsm8
LSM8 homolog, U6 small nuclear RNA associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624827:1,192,380...1,201,994
G
Magohb
mago homolog B, exon junction complex subunit
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chrNW_004624752:27,280,411...27,288,292
Ensembl chrNW_004624752:27,280,407...27,288,260
G
Mbnl1
muscleblind like splicing regulator 1
ISO
RGD
PMID:23498935
RGD:9686382
NCBI chrNW_004624730:29,930,292...30,112,145
Ensembl chrNW_004624730:29,959,580...30,113,245
G
Plrg1
pleiotropic regulator 1
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624858:5,801,884...5,818,005
G
Pnn
pinin, desmosome associated protein
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chrNW_004624813:8,620,089...8,627,964
Ensembl chrNW_004624813:8,620,174...8,626,886
G
Ppie
peptidylprolyl isomerase E
ISO
RGD
PMID:18544344 PMID:23742842
RGD:9686094 RGD:9686376
NCBI chrNW_004624764:22,222,103...22,237,113
Ensembl chrNW_004624764:22,222,047...22,237,113
G
Ppig
peptidylprolyl isomerase G
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chrNW_004624787:7,128,348...7,179,041
Ensembl chrNW_004624787:7,128,344...7,175,172
G
Ppih
peptidylprolyl isomerase H
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chrNW_004624892:1,916,873...1,935,458
Ensembl chrNW_004624892:1,916,912...1,935,875
G
Ppil1
peptidylprolyl isomerase like 1
ISO
RGD
PMID:18544344 PMID:23742842
RGD:9686094 RGD:9686376
NCBI chrNW_004624754:20,976,765...20,985,408
Ensembl chrNW_004624754:20,976,515...20,985,393
G
Ppil2
peptidylprolyl isomerase like 2
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chrNW_004624747:1,221,703...1,248,398
Ensembl chrNW_004624747:1,221,631...1,248,391
G
Ppil3
peptidylprolyl isomerase like 3
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chrNW_004624889:283,570...294,949
Ensembl chrNW_004624889:286,039...293,755
G
Prpf18
pre-mRNA processing factor 18
ISO
RGD
PMID:24452469
RGD:9686092
NCBI chrNW_004624805:1,593,697...1,635,987
Ensembl chrNW_004624805:1,602,782...1,637,099
G
Prpf19
pre-mRNA processing factor 19
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624926:268,965...274,634
Ensembl chrNW_004624926:266,159...274,529
G
Prpf3
pre-mRNA processing factor 3
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004624772:18,074,535...18,097,191
Ensembl chrNW_004624772:18,070,970...18,100,423
G
Prpf31
pre-mRNA processing factor 31
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004624832:2,445,143...2,455,461
Ensembl chrNW_004624832:2,445,143...2,454,808
G
Prpf4
pre-mRNA splicing tri-snRNP complex factor PRPF4
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004624760:21,803,740...21,820,492
Ensembl chrNW_004624760:21,805,035...21,820,402
G
Prpf6
pre-mRNA processing factor 6
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004624741:29,601,050...29,664,054
Ensembl chrNW_004624741:29,601,047...29,664,054
G
Prpf8
pre-mRNA processing factor 8
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chrNW_004624786:4,356,481...4,392,594
Ensembl chrNW_004624786:4,355,993...4,393,243
G
Ptbp1
polypyrimidine tract binding protein 1
ISO
RGD
PMID:23385723
RGD:9686381
NCBI chrNW_004624828:7,750,419...7,762,645
Ensembl chrNW_004624828:7,750,323...7,762,589
G
Ptbp2
polypyrimidine tract binding protein 2
ISO
RGD
PMID:23498935
RGD:9686382
NCBI chrNW_004624742:783,612...856,039
Ensembl chrNW_004624742:783,612...855,900
G
Qki
QKI, KH domain containing RNA binding
ISO
RGD
PMID:23385723
RGD:9686381
NCBI chrNW_004624785:15,738,231...15,845,051
Ensembl chrNW_004624785:15,739,187...15,845,024
G
Rbm22
RNA binding motif protein 22
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624774:9,935,701...9,946,422
Ensembl chrNW_004624774:9,935,704...9,946,472
G
Rbm8a
RNA binding motif protein 8A
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chrNW_004624772:17,286,950...17,289,143
Ensembl chrNW_004624772:17,286,957...17,295,135
G
Rbmx
RNA binding motif protein X-linked
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624808:10,176,695...10,185,847
Ensembl chrNW_004624808:10,176,293...10,182,079
G
Rnps1
RNA binding protein with serine rich domain 1
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chrNW_004624824:67,927...78,276
Ensembl chrNW_004624824:67,927...78,180
G
Sart3
spliceosome associated factor 3, U4/U6 recycling protein
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chrNW_004624747:11,775,012...11,807,597
Ensembl chrNW_004624747:11,775,039...11,807,552
G
Sf1
splicing factor 1
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004624767:21,606,059...21,621,831
Ensembl chrNW_004624767:21,606,065...21,621,830
G
Sf3a1
splicing factor 3a subunit 1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624747:6,654,656...6,679,525
Ensembl chrNW_004624747:6,655,037...6,679,640
G
Sf3a2
splicing factor 3a subunit 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624828:6,638,546...6,646,529
Ensembl chrNW_004624828:6,638,660...6,644,788
G
Sf3a3
splicing factor 3a subunit 3
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624764:20,615,963...20,639,005
Ensembl chrNW_004624764:20,615,830...20,639,005
G
Sf3b1
splicing factor 3b subunit 1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624889:2,796,351...2,835,592
G
Sf3b2
splicing factor 3b subunit 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624767:20,326,499...20,340,204
Ensembl chrNW_004624767:20,326,499...20,340,164
G
Sf3b3
splicing factor 3b subunit 3
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624746:12,747,346...12,793,639
Ensembl chrNW_004624746:12,747,382...12,793,643
G
Sf3b4
splicing factor 3b subunit 4
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624772:17,701,930...17,706,613
Ensembl chrNW_004624772:17,701,341...17,706,550
G
Sf3b5
splicing factor 3b subunit 5
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624753:10,227,419...10,228,106
Ensembl chrNW_004624753:10,227,560...10,227,820
G
Sf3b6
splicing factor 3b subunit 6
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624738:6,395,610...6,404,794
Ensembl chrNW_004624738:6,395,616...6,404,855
G
Slu7
SLU7 homolog, splicing factor
ISO
RGD
PMID:24452469
RGD:9686092
NCBI chrNW_004624733:29,147,329...29,161,687
Ensembl chrNW_004624733:29,146,579...29,162,074
G
Snrnp200
small nuclear ribonucleoprotein U5 subunit 200
ISO
RGD
PMID:23454554 PMID:23592432
RGD:9686090 RGD:9686093
NCBI chrNW_004624749:2,351,476...2,378,047
Ensembl chrNW_004624749:2,351,373...2,378,159
G
Snrnp70
small nuclear ribonucleoprotein U1 subunit 70
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chrNW_004624832:4,973,251...4,988,679
G
Snrpa
small nuclear ribonucleoprotein polypeptide A
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chrNW_004624925:671,038...696,695
G
Snrpa1
small nuclear ribonucleoprotein polypeptide A'
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624768:3,523,621...3,534,552
Ensembl chrNW_004624768:3,523,719...3,535,195
G
Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624741:3,694,488...3,703,169
Ensembl chrNW_004624741:3,691,676...3,703,255
G
Snrpb2
small nuclear ribonucleoprotein polypeptide B2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624741:17,892,908...17,902,321
Ensembl chrNW_004624741:17,892,964...17,902,321
G
Snrpc
small nuclear ribonucleoprotein polypeptide C
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chrNW_004624754:22,553,485...22,567,601
Ensembl chrNW_004624754:22,553,491...22,567,529
G
Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624770:10,134,623...10,147,342
Ensembl chrNW_004624770:10,135,425...10,147,298
G
Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624832:7,488,259...7,495,305
Ensembl chrNW_004624832:7,488,674...7,495,306
G
Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624747:9,973,949...9,987,520
Ensembl chrNW_004624747:9,962,467...9,987,511
G
Snrpe
small nuclear ribonucleoprotein polypeptide E
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624807:7,079,944...7,086,973
Ensembl chrNW_004624807:7,079,090...7,087,215
G
Snrpf
small nuclear ribonucleoprotein polypeptide F
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624750:11,430,311...11,436,223
Ensembl chrNW_004624750:11,430,311...11,436,204
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624762:3,157,769...3,164,084
Ensembl chrNW_004624762:3,157,796...3,164,084
G
Snu13
small nuclear ribonucleoprotein 13
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004624752:6,972,557...6,985,033
Ensembl chrNW_004624752:6,972,618...6,985,033
G
Snw1
SNW domain containing 1
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624734:24,161,974...24,191,943
Ensembl chrNW_004624734:24,161,662...24,191,937
G
Srrm1
serine and arginine repetitive matrix 1
ISO
RGD
PMID:15145352 PMID:17537823
RGD:9686091 RGD:9686404
NCBI chrNW_004624764:9,010,440...9,043,277
Ensembl chrNW_004624764:9,010,499...9,042,579
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Srrm2
serine/arginine repetitive matrix 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624824:594,203...613,225
Ensembl chrNW_004624824:594,790...609,750
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Srrm4
serine/arginine repetitive matrix 4
ISO
RGD
PMID:23498935
RGD:9686382
NCBI chrNW_004624747:14,411,549...14,564,731
Ensembl chrNW_004624747:14,417,237...14,564,307
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Srsf10
serine and arginine rich splicing factor 10
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624764:8,460,102...8,475,371
Ensembl chrNW_004624764:8,460,108...8,475,355
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Srsf11
serine and arginine rich splicing factor 11
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624742:25,761,410...25,787,195
Ensembl chrNW_004624742:25,761,410...25,789,972
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Srsf12
serine and arginine rich splicing factor 12
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624799:5,069,622...5,087,530
Ensembl chrNW_004624799:5,070,074...5,087,530
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Srsf2
serine and arginine rich splicing factor 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624801:6,575,322...6,578,429
Ensembl chrNW_004624801:6,575,325...6,578,468
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Srsf3
serine and arginine rich splicing factor 3
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624754:21,163,232...21,171,122
Ensembl chrNW_004624754:21,163,232...21,171,058
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Srsf4
serine and arginine rich splicing factor 4
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624764:12,916,857...12,945,861
Ensembl chrNW_004624764:12,916,858...12,946,238
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Srsf5
serine and arginine rich splicing factor 5
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624734:31,309,647...31,314,923
Ensembl chrNW_004624734:31,309,656...31,314,891
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Srsf6
serine and arginine rich splicing factor 6
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624790:10,812,013...10,817,414
Ensembl chrNW_004624790:10,812,013...10,817,833
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Srsf7
serine and arginine rich splicing factor 7
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624738:20,251,876...20,259,794
Ensembl chrNW_004624738:20,251,876...20,259,729
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Srsf9
serine and arginine rich splicing factor 9
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004624747:13,202,014...13,212,611
Ensembl chrNW_004624747:13,201,217...13,209,481
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Syf2
SYF2 pre-mRNA splicing factor
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624764:9,464,487...9,479,714
Ensembl chrNW_004624764:9,463,586...9,479,786
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Syncrip
synaptotagmin binding cytoplasmic RNA interacting protein
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004624799:8,616,787...8,657,466
Ensembl chrNW_004624799:8,616,808...8,652,923
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Tial1
TIA1 cytotoxic granule associated RNA binding protein like 1
ISO
RGD
PMID:23385723
RGD:9686381
NCBI chrNW_004624737:27,236,533...27,259,464
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Txnl4a
thioredoxin like 4A
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004624806:367,668...385,946
Ensembl chrNW_004624806:367,286...385,946
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U2af1
U2 small nuclear RNA auxiliary factor 1
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004624745:27,647,672...27,660,599
Ensembl chrNW_004624745:27,647,597...27,660,809
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U2af2
U2 small nuclear RNA auxiliary factor 2
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004624832:1,747,237...1,762,080
Ensembl chrNW_004624832:1,747,642...1,761,112
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Xab2
XPA binding protein 2
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004624828:704,400...711,963
Ensembl chrNW_004624828:704,300...712,251
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Clp1
cleavage factor polyribonucleotide kinase subunit 1
ISO
RGD
PMID:25071838
RGD:9685342
NCBI chrNW_004624864:3,063,555...3,067,045
Ensembl chrNW_004624864:3,063,555...3,067,051
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Elac1
elaC ribonuclease Z 1
ISO
RGD
PMID:21572561
RGD:9685334
NCBI chrNW_004624778:14,517,934...14,536,509
Ensembl chrNW_004624778:14,517,716...14,530,864
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Elac2
elaC ribonuclease Z 2
ISO
RGD
PMID:21572561
RGD:9685334
NCBI chrNW_004624877:852,422...874,736
Ensembl chrNW_004624877:850,726...874,831
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Pop1
POP1 homolog, ribonuclease P/MRP subunit
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004624763:5,264,003...5,299,000
Ensembl chrNW_004624763:5,269,847...5,300,723
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Pop4
POP4 homolog, ribonuclease P/MRP subunit
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004624794:4,788,960...4,799,307
Ensembl chrNW_004624794:4,791,609...4,801,359
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Pop5
POP5 homolog, ribonuclease P/MRP subunit
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004624747:13,088,928...13,092,691
Ensembl chrNW_004624747:13,088,947...13,092,001
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Pop7
POP7 homolog, ribonuclease P/MRP subunit
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004624740:16,398,272...16,399,364
Ensembl chrNW_004624740:16,398,272...16,399,417
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Rpp14
ribonuclease P/MRP subunit p14
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004624822:5,385,116...5,386,765
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Rpp21
ribonuclease P/MRP subunit p21
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004624754:25,171,434...25,179,038
Ensembl chrNW_004624754:25,176,620...25,178,251
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Rpp25
ribonuclease P and MRP subunit p25
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004624894:134,202...136,226
Ensembl chrNW_004624894:134,804...135,364
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Rpp30
ribonuclease P/MRP subunit p30
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004624737:2,087,357...2,114,878
Ensembl chrNW_004624737:2,086,748...2,114,618
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Rpp38
ribonuclease P/MRP subunit p38
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004624805:456,432...460,906
Ensembl chrNW_004624805:453,703...460,430
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Rpp40
ribonuclease P/MRP subunit p40
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004624756:20,233,659...20,242,733
Ensembl chrNW_004624756:20,233,664...20,243,598
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Rtcb
RNA 2',3'-cyclic phosphate and 5'-OH ligase
ISO
RGD
PMID:25071838
RGD:9685342
NCBI chrNW_004624750:2,045,093...2,062,640
Ensembl chrNW_004624750:2,045,092...2,064,233
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Ssb
small RNA binding exonuclease protection factor La
ISO
RGD
PMID:21572561
RGD:9685334
NCBI chrNW_004624787:7,292,549...7,301,190
G
Tsen15
tRNA splicing endonuclease subunit 15
ISO
RGD
PMID:25071838
RGD:9685342
NCBI chrNW_004624814:9,590,991...9,611,368
G
Tsen2
tRNA splicing endonuclease subunit 2
ISO
RGD
PMID:25071838
RGD:9685342
NCBI chrNW_004624956:21,284...51,588
Ensembl chrNW_004624956:22,035...46,874
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Tsen34
tRNA splicing endonuclease subunit 34
ISO
RGD
PMID:25071838
RGD:9685342
NCBI chrNW_004624832:2,401,411...2,406,896
Ensembl chrNW_004624832:2,401,619...2,407,525
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Tsen54
tRNA splicing endonuclease subunit 54
ISO
RGD
PMID:25071838
RGD:9685342
NCBI chrNW_004624801:5,320,482...5,329,125
Ensembl chrNW_004624801:5,320,556...5,329,131
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all