PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: RNA polymerase transcription pathway
Accession: PW:0001272
browse the term
Definition: The pathway of DNA transcription carried out by the prokaryotic and the several eukaryotic polymerases.
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Clp1
cleavage factor polyribonucleotide kinase subunit 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955511:2,588,825...2,592,108
Ensembl chrNW_004955511:2,588,825...2,593,192
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Cpsf1
cleavage and polyadenylation specific factor 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955454:3,024,324...3,039,004
Ensembl chrNW_004955454:3,024,406...3,039,425
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Cpsf2
cleavage and polyadenylation specific factor 2
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955438:14,449,320...14,483,003
Ensembl chrNW_004955438:14,452,943...14,483,199
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Cpsf3
cleavage and polyadenylation specific factor 3
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955487:5,146,541...5,170,077
Ensembl chrNW_004955487:5,146,541...5,170,077
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Cpsf4
cleavage and polyadenylation specific factor 4
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955460:15,111,624...15,128,243
Ensembl chrNW_004955460:15,110,989...15,128,243
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Cpsf6
cleavage and polyadenylation specific factor 6
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955458:15,684,040...15,708,011
Ensembl chrNW_004955458:15,677,645...15,708,011
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Cpsf7
cleavage and polyadenylation specific factor 7
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955511:6,139,118...6,161,130
Ensembl chrNW_004955511:6,139,118...6,161,130
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Cstf1
cleavage stimulation factor subunit 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955445:2,816,986...2,830,971
Ensembl chrNW_004955445:2,816,732...2,830,306
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Cstf2
cleavage stimulation factor subunit 2
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955503:6,949,901...6,971,281
Ensembl chrNW_004955503:6,949,823...6,975,030
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Cstf2t
cleavage stimulation factor subunit 2 tau variant
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955425:6,830,775...6,834,799
Ensembl chrNW_004955425:6,832,580...6,834,499
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Cstf3
cleavage stimulation factor subunit 3
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955422:13,049,908...13,124,274
Ensembl chrNW_004955422:13,050,088...13,123,784
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Dxo
decapping exoribonuclease
ISO
RGD
PMID:21957020
RGD:9681741
NCBI chrNW_004955437:482,866...484,989
Ensembl chrNW_004955437:481,554...484,989
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Fip1l1
factor interacting with PAPOLA and CPSF1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955447:17,265,269...17,334,197
Ensembl chrNW_004955447:17,265,269...17,334,197
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Nudt21
nudix hydrolase 21
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955433:14,220,356...14,234,423
Ensembl chrNW_004955433:14,216,974...14,234,611
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Pabpn1
poly(A) binding protein nuclear 1
ISO
RGD
PMID:24243805
RGD:9681742
NCBI chrNW_004955409:37,000,423...37,004,823
Ensembl chrNW_004955409:37,000,451...37,004,682
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Papola
poly(A) polymerase alpha
ISO
RGD
PMID:24243805
RGD:9681742
NCBI chrNW_004955438:18,267,515...18,334,379
Ensembl chrNW_004955438:18,267,517...18,335,148
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Papolb
poly(A) polymerase beta
ISO
RGD
PMID:24243805
RGD:9681742
NCBI chrNW_004955460:10,941,776...10,946,235
Ensembl chrNW_004955460:10,872,735...10,946,235
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Papolg
poly(A) polymerase gamma
ISO
RGD
PMID:24243805
RGD:9681742
NCBI chrNW_004955424:23,005,942...23,034,360
Ensembl chrNW_004955424:23,003,107...23,034,412
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Pcf11
PCF11 cleavage and polyadenylation factor subunit
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955414:9,401,919...9,428,501
Ensembl chrNW_004955414:9,402,818...9,428,501
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Sympk
symplekin scaffold protein
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955574:264,312...292,616
Ensembl chrNW_004955574:261,056...292,652
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Wdr33
WD repeat domain 33
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955459:2,740,465...2,841,376
Ensembl chrNW_004955459:2,740,466...2,841,376
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Xrn2
5'-3' exoribonuclease 2
ISO
RGD
PMID:21957020
RGD:9681741
NCBI chrNW_004955415:29,107,060...29,175,374
Ensembl chrNW_004955415:29,107,034...29,175,538
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Ncbp1
nuclear cap binding protein subunit 1
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004955419:27,778,300...27,819,878
Ensembl chrNW_004955419:27,778,300...27,819,878
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Ncbp2
nuclear cap binding protein subunit 2
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004955420:12,979,368...12,992,500
Ensembl chrNW_004955420:12,979,368...12,992,500
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Ramac
RNA guanine-7 methyltransferase activating subunit
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004955416:13,686,997...13,691,792
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Rngtt
RNA guanylyltransferase and 5'-phosphatase
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004955411:15,486,532...15,766,880
Ensembl chrNW_004955411:15,486,303...15,766,864
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Rnmt
RNA guanine-7 methyltransferase
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004955402:319,520...344,129
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Cavin1
caveolae associated protein 1
ISO
RGD
PMID:23092677
RGD:9588249
NCBI chrNW_004955451:16,364,915...16,374,523
Ensembl chrNW_004955451:16,364,915...16,374,634
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Cdc73
cell division cycle 73
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004955406:30,533,919...30,665,812
Ensembl chrNW_004955406:30,533,060...30,665,812
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Crebbp
CREB binding protein
ISO
RGD
PMID:24022641
RGD:9588250
NCBI chrNW_004955442:13,559,496...13,691,913
Ensembl chrNW_004955442:13,559,496...13,692,004
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Ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004955414:26,347,508...26,373,726
Ensembl chrNW_004955414:26,347,508...26,373,785
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Leo1
LEO1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004955409:2,711,475...2,727,879
Ensembl chrNW_004955409:2,711,564...2,727,755
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Ncl
nucleolin
ISO
RGD
PMID:21893173 PMID:25225127
RGD:9588244 RGD:9588251
NCBI chrNW_004955453:4,154,627...4,164,253
Ensembl chrNW_004955453:4,154,627...4,164,253
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Paf1
PAF1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004955468:166,477...172,200
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Polr1a
RNA polymerase I subunit A
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955424:1,507,935...1,595,068
Ensembl chrNW_004955424:1,508,037...1,593,108
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Polr1b
RNA polymerase I subunit B
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955470:1,714,156...1,737,749
Ensembl chrNW_004955470:1,714,156...1,737,820
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Polr1c
RNA polymerase I and III subunit C
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955437:9,346,397...9,350,591
Ensembl chrNW_004955437:9,346,397...9,350,591
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Polr1d
RNA polymerase I and III subunit D
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955497:7,029,556...7,030,128
Ensembl chrNW_004955497:7,029,557...7,029,931
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Polr1e
RNA polymerase I subunit E
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955419:28,970,982...28,983,862
Ensembl chrNW_004955419:28,967,083...28,983,862
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Polr1f
RNA polymerase I subunit F
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955410:22,435,136...22,442,839
Ensembl chrNW_004955410:22,434,704...22,442,862
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Polr1g
RNA polymerase I subunit G
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955555:2,389,569...2,393,410
Ensembl chrNW_004955555:2,391,106...2,393,369
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Polr1h
RNA polymerase I subunit H
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955583:191,252...195,563
Ensembl chrNW_004955583:191,564...195,358
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Polr2e
RNA polymerase II, I and III subunit E
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955495:6,779,557...6,788,241
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Polr2f
RNA polymerase II, I and III subunit F
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955413:24,300,340...24,309,798
Ensembl chrNW_004955413:24,300,340...24,311,166
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Polr2h
RNA polymerase II, I and III subunit H
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955420:23,132,053...23,136,954
Ensembl chrNW_004955420:23,131,297...23,136,800
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Polr2k
RNA polymerase II, I and III subunit K
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955417:15,412,527...15,416,090
Ensembl chrNW_004955417:15,412,527...15,416,090
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Polr2l
RNA polymerase II, I and III subunit L
ISO
RGD
PMID:21893173 PMID:22365827
RGD:9588244 RGD:9588262
NCBI chrNW_004955476:11,291,215...11,293,536
Ensembl chrNW_004955476:11,291,215...11,293,536
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Rrn3
RRN3 homolog, RNA polymerase I transcription factor
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004955442:129,106...166,258
Ensembl chrNW_004955442:129,106...166,258
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Rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004955416:8,237,439...8,293,802
Ensembl chrNW_004955416:8,237,439...8,293,802
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Sirt1
sirtuin 1
ISO
RGD
PMID:24022641
RGD:9588250
NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
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Sirt7
sirtuin 7
ISO
RGD
PMID:24022641
RGD:9588250
NCBI chrNW_004955506:1,252,271...1,258,728
Ensembl chrNW_004955506:1,252,274...1,258,728
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Skic8
SKI8 subunit of superkiller complex
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004955450:771,646...788,895
Ensembl chrNW_004955450:770,750...789,485
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Ssrp1
structure specific recognition protein 1
ISO
RGD
PMID:21454601
RGD:9588245
NCBI chrNW_004955511:2,378,720...2,388,201
Ensembl chrNW_004955511:2,378,652...2,388,198
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Supt16h
SPT16 homolog, facilitates chromatin remodeling subunit
ISO
RGD
PMID:21454601
RGD:9588245
NCBI chrNW_004955550:2,074,646...2,114,634
Ensembl chrNW_004955550:2,074,941...2,114,528
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Supt4h1
SPT4 homolog, DSIF elongation factor subunit
ISO
RGD
PMID:21893173
RGD:9588244
NCBI chrNW_004955451:4,682,308...4,688,008
Ensembl chrNW_004955451:4,682,311...4,688,008
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Supt5h
SPT5 homolog, DSIF elongation factor subunit
ISO
RGD
PMID:21893173
RGD:9588244
NCBI chrNW_004955468:95,997...123,005
Ensembl chrNW_004955468:95,181...123,147
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Taf1a
TATA-box binding protein associated factor, RNA polymerase I subunit A
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004955520:1,900,802...1,921,350
Ensembl chrNW_004955520:1,901,405...1,921,900
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Taf1b
TATA-box binding protein associated factor, RNA polymerase I subunit B
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004955487:5,359,132...5,394,564
Ensembl chrNW_004955487:5,359,112...5,394,707
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Taf1c
TATA-box binding protein associated factor, RNA polymerase I subunit C
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004955564:121,988...132,347
Ensembl chrNW_004955564:87,452...134,650
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Taf1d
TATA-box binding protein associated factor, RNA polymerase I subunit D
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004955414:799,124...806,242
Ensembl chrNW_004955414:799,138...803,005
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Tbp
TATA-box binding protein
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004955411:3,268,147...3,285,567
Ensembl chrNW_004955411:3,268,147...3,285,077
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Ttf1
transcription termination factor 1
ISO
RGD
PMID:23092677
RGD:9588249
NCBI chrNW_004955513:1,804,690...1,829,705
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Ubtf
upstream binding transcription factor
ISO
RGD
PMID:21893173 PMID:22960599
RGD:9588243 RGD:9588244
NCBI chrNW_004955451:17,294,163...17,302,807
Ensembl chrNW_004955451:17,294,251...17,302,746
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Aff1
ALF transcription elongation factor 1
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004955474:2,748,438...2,899,094
Ensembl chrNW_004955474:2,751,809...2,896,311
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Aff4
ALF transcription elongation factor 4
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004955408:4,247,730...4,305,194
Ensembl chrNW_004955408:4,248,563...4,305,194
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Ccnk
cyclin K
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955438:20,826,818...20,850,496
Ensembl chrNW_004955438:20,835,825...20,849,999
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Ccnt1
cyclin T1
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955500:7,580,625...7,606,913
Ensembl chrNW_004955500:7,580,625...7,606,913
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Ccnt2
cyclin T2
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955440:2,424,976...2,468,388
Ensembl chrNW_004955440:2,424,978...2,470,811
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Cdc73
cell division cycle 73
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004955406:30,533,919...30,665,812
Ensembl chrNW_004955406:30,533,060...30,665,812
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Cdk9
cyclin dependent kinase 9
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955419:874,959...883,160
Ensembl chrNW_004955419:873,289...883,160
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Ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004955414:26,347,508...26,373,726
Ensembl chrNW_004955414:26,347,508...26,373,785
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Eaf1
ELL associated factor 1
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004955430:1,933,290...1,946,900
Ensembl chrNW_004955430:1,933,290...1,947,932
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Eaf2
ELL associated factor 2
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004955427:21,171,900...21,204,138
Ensembl chrNW_004955427:21,172,009...21,204,051
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Ell
elongation factor for RNA polymerase II
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004955524:3,054,296...3,094,125
Ensembl chrNW_004955524:3,054,292...3,092,973
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Ell2
elongation factor for RNA polymerase II 2
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004955418:16,615,340...16,686,632
Ensembl chrNW_004955418:16,614,543...16,687,698
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Ell3
elongation factor for RNA polymerase II 3
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004955416:10,223,213...10,226,978
Ensembl chrNW_004955416:10,198,508...10,226,120
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Gtf2f1
general transcription factor IIF subunit 1
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955495:3,208,334...3,217,460
Ensembl chrNW_004955495:3,208,733...3,217,163
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Gtf2f2
general transcription factor IIF subunit 2
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955518:2,912,259...3,064,298
Ensembl chrNW_004955518:2,912,259...3,064,298
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Leo1
LEO1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004955409:2,711,475...2,727,879
Ensembl chrNW_004955409:2,711,564...2,727,755
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Mllt1
MLLT1 super elongation complex subunit
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004955495:3,289,644...3,336,455
Ensembl chrNW_004955495:3,289,641...3,336,509
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Mllt3
MLLT3 super elongation complex subunit
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chrNW_004955434:22,594,681...22,873,826
Ensembl chrNW_004955434:22,594,681...22,873,826
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Ncbp1
nuclear cap binding protein subunit 1
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004955419:27,778,300...27,819,878
Ensembl chrNW_004955419:27,778,300...27,819,878
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Ncbp2
nuclear cap binding protein subunit 2
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004955420:12,979,368...12,992,500
Ensembl chrNW_004955420:12,979,368...12,992,500
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Nelfa
negative elongation factor complex member A
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955514:1,162,993...1,173,278
Ensembl chrNW_004955514:1,162,993...1,173,278
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Nelfb
negative elongation factor complex member B
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955513:5,248,190...5,261,018
Ensembl chrNW_004955513:5,248,190...5,262,044
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Nelfcd
negative elongation factor complex member C/D
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955445:597,826...610,134
Ensembl chrNW_004955445:597,826...610,134
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Nelfe
negative elongation factor complex member E
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955437:467,018...473,084
Ensembl chrNW_004955437:466,690...473,084
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Paf1
PAF1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004955468:166,477...172,200
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Rngtt
RNA guanylyltransferase and 5'-phosphatase
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chrNW_004955411:15,486,532...15,766,880
Ensembl chrNW_004955411:15,486,303...15,766,864
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Rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004955416:8,237,439...8,293,802
Ensembl chrNW_004955416:8,237,439...8,293,802
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Skic8
SKI8 subunit of superkiller complex
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chrNW_004955450:771,646...788,895
Ensembl chrNW_004955450:770,750...789,485
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Ssrp1
structure specific recognition protein 1
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955511:2,378,720...2,388,201
Ensembl chrNW_004955511:2,378,652...2,388,198
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Supt16h
SPT16 homolog, facilitates chromatin remodeling subunit
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955550:2,074,646...2,114,634
Ensembl chrNW_004955550:2,074,941...2,114,528
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Supt4h1
SPT4 homolog, DSIF elongation factor subunit
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955451:4,682,308...4,688,008
Ensembl chrNW_004955451:4,682,311...4,688,008
G
Supt5h
SPT5 homolog, DSIF elongation factor subunit
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955468:95,997...123,005
Ensembl chrNW_004955468:95,181...123,147
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Tcea1
transcription elongation factor A1
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955454:13,312,823...13,347,128
Ensembl chrNW_004955454:13,312,823...13,347,129
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Tcea2
transcription elongation factor A2
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955528:186,642...194,058
Ensembl chrNW_004955528:186,642...194,058
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Tcea3
transcription elongation factor A3
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chrNW_004955452:3,384,424...3,434,182
G
Atxn7
ataxin 7
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955517:1,897,050...1,980,428
Ensembl chrNW_004955517:1,892,757...1,980,524
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Atxn7l3
ataxin 7 like 3
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955451:17,280,659...17,286,140
Ensembl chrNW_004955451:17,280,659...17,286,140
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Ccnh
cyclin H
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004955418:23,790,398...23,807,509
Ensembl chrNW_004955418:23,790,001...23,807,702
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Cdk7
cyclin dependent kinase 7
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004955446:54,401...87,884
Ensembl chrNW_004955446:54,448...90,191
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Dr1
down-regulator of transcription 1
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955423:1,262,633...1,281,870
Ensembl chrNW_004955423:1,262,633...1,281,870
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Eny2
ENY2 transcription and export complex 2 subunit
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955417:16,750,563...16,760,839
Ensembl chrNW_004955417:16,750,579...16,760,839
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Ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004955555:2,355,005...2,369,599
Ensembl chrNW_004955555:2,355,005...2,369,599
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Ercc3
ERCC excision repair 3, TFIIH core complex helicase subunit
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004955459:3,210,936...3,238,401
Ensembl chrNW_004955459:3,210,479...3,242,576
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Ercc5
ERCC excision repair 5, endonuclease
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004955404:8,294,506...8,321,505
Ensembl chrNW_004955404:8,294,346...8,321,112
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Gtf2a1
general transcription factor IIA subunit 1
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004955438:4,787,190...4,825,578
Ensembl chrNW_004955438:4,787,190...4,825,577
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Gtf2a2
general transcription factor IIA subunit 2
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004955450:15,181,824...15,195,594
G
Gtf2b
general transcription factor IIB
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004955423:5,420,795...5,447,148
Ensembl chrNW_004955423:5,420,584...5,447,148
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Gtf2e1
general transcription factor IIE subunit 1
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004955427:20,242,326...20,273,314
Ensembl chrNW_004955427:20,241,774...20,273,551
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Gtf2e2
general transcription factor IIE subunit 2
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004955463:7,000,868...7,080,778
Ensembl chrNW_004955463:7,000,868...7,084,207
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Gtf2f1
general transcription factor IIF subunit 1
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004955495:3,208,334...3,217,460
Ensembl chrNW_004955495:3,208,733...3,217,163
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Gtf2f2
general transcription factor IIF subunit 2
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chrNW_004955518:2,912,259...3,064,298
Ensembl chrNW_004955518:2,912,259...3,064,298
G
Gtf2h1
general transcription factor IIH subunit 1
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004955414:33,028,701...33,063,233
Ensembl chrNW_004955414:33,028,701...33,063,233
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Gtf2h3
general transcription factor IIH subunit 3
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004955482:5,365,669...5,380,047
Ensembl chrNW_004955482:5,365,142...5,380,047
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Gtf2h4
general transcription factor IIH subunit 4
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004955583:842,750...847,575
Ensembl chrNW_004955583:842,287...847,960
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Gtf2h5
general transcription factor IIH subunit 5
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004955439:4,226,530...4,234,390
Ensembl chrNW_004955439:4,226,530...4,234,261
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Hcfc2
host cell factor C2
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955405:38,729,700...38,758,398
Ensembl chrNW_004955405:38,730,054...38,760,115
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Kat14
lysine acetyltransferase 14
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955415:26,872,095...26,895,009
Ensembl chrNW_004955415:26,871,668...26,898,035
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Kat2a
lysine acetyltransferase 2A
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955451:16,192,228...16,197,103
Ensembl chrNW_004955451:16,191,186...16,197,574
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Kat2b
lysine acetyltransferase 2B
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955430:12,109,493...12,196,102
Ensembl chrNW_004955430:12,128,069...12,198,117
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Mbip
MAP3K12 binding inhibitory protein 1
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955409:24,821,884...24,848,125
Ensembl chrNW_004955409:24,821,884...24,848,125
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Mnat1
MNAT1 component of CDK activating kinase
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chrNW_004955466:8,690,960...8,895,021
Ensembl chrNW_004955466:8,690,960...8,895,021
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Pole3
DNA polymerase epsilon 3, accessory subunit
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955419:14,086,940...14,089,906
Ensembl chrNW_004955419:14,086,940...14,089,330
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Sgf29
SAGA complex associated factor 29
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955493:6,759,426...6,774,796
Ensembl chrNW_004955493:6,759,426...6,774,796
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Supt20h
SPT20 homolog, SAGA complex component
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955431:9,013,325...9,050,844
Ensembl chrNW_004955431:9,014,726...9,050,844
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Supt3h
SPT3 homolog, SAGA and STAGA complex component
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955437:10,207,802...10,649,559
Ensembl chrNW_004955437:10,258,783...10,649,590
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Supt7l
SPT7 like, STAGA complex subunit gamma
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955469:9,584,863...9,617,194
Ensembl chrNW_004955469:9,601,767...9,617,188
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Tada1
transcriptional adaptor 1
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955462:10,057,468...10,073,871
Ensembl chrNW_004955462:10,057,559...10,073,865
G
Tada2a
transcriptional adaptor 2A
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955451:548,373...599,739
Ensembl chrNW_004955451:549,028...587,996
G
Tada2b
transcriptional adaptor 2B
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955514:3,468,078...3,478,085
Ensembl chrNW_004955514:3,468,087...3,478,085
G
Tada3
transcriptional adaptor 3
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955561:1,304,222...1,314,092
Ensembl chrNW_004955561:1,304,232...1,348,121
G
Taf1
TATA-box binding protein associated factor 1
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004955475:10,930,175...11,006,876
Ensembl chrNW_004955475:10,930,192...11,005,724
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Taf10
TATA-box binding protein associated factor 10
ISO
RGD
PMID:22426530 PMID:23146842
RGD:9681723 RGD:9681728
NCBI chrNW_004955414:22,322,954...22,324,412
Ensembl chrNW_004955414:22,323,031...22,324,367
G
Taf11
TATA-box binding protein associated factor 11
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004955437:2,908,939...2,916,154
Ensembl chrNW_004955437:2,908,939...2,916,154
G
Taf13
TATA-box binding protein associated factor 13
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004955435:12,488,578...12,496,894
Ensembl chrNW_004955435:12,486,126...12,496,894
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Taf15
TATA-box binding protein associated factor 15
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004955481:10,242,839...10,274,961
Ensembl chrNW_004955481:10,252,393...10,274,860
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Taf2
TATA-box binding protein associated factor 2
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004955417:25,457,615...25,515,923
G
Taf3
TATA-box binding protein associated factor 3
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004955421:24,263,395...24,414,472
G
Taf4
TATA-box binding protein associated factor 4
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004955528:1,951,952...2,020,592
Ensembl chrNW_004955528:1,994,249...2,020,494
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Taf5
TATA-box binding protein associated factor 5
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004955485:7,159,199...7,176,269
Ensembl chrNW_004955485:7,160,022...7,175,608
G
Taf5l
TATA-box binding protein associated factor 5 like
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955492:8,478,147...8,515,988
Ensembl chrNW_004955492:8,479,194...8,517,105
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Taf6
TATA-box binding protein associated factor 6
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004955573:752,646...759,292
Ensembl chrNW_004955573:752,601...759,292
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Taf6l
TATA-box binding protein associated factor 6 like
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955599:453,275...461,571
Ensembl chrNW_004955599:454,157...461,573
G
Taf7
TATA-box binding protein associated factor 7
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004955415:12,453,655...12,456,070
Ensembl chrNW_004955415:12,453,655...12,456,070
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Taf8
TATA-box binding protein associated factor 8
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chrNW_004955437:8,317,437...8,328,544
Ensembl chrNW_004955437:8,317,437...8,328,804
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Taf9
TATA-box binding protein associated factor 9
ISO
RGD
PMID:22426530 PMID:23146842
RGD:9681723 RGD:9681728
NCBI chrNW_004955575:74,506...76,272
Ensembl chrNW_004955575:74,506...76,272
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Tbp
TATA-box binding protein
ISO
RGD
PMID:23146842 PMID:24120742
RGD:9681721 RGD:9681723
NCBI chrNW_004955411:3,268,147...3,285,567
Ensembl chrNW_004955411:3,268,147...3,285,077
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Trrap
transformation/transcription domain associated protein
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955460:14,641,891...14,761,641
Ensembl chrNW_004955460:14,644,133...14,760,787
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Usp22
ubiquitin specific peptidase 22
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955577:979,317...1,002,478
Ensembl chrNW_004955577:978,152...1,002,480
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Wdr5
WD repeat domain 5
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955513:3,198,655...3,213,754
Ensembl chrNW_004955513:3,198,980...3,216,468
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Yeats2
YEATS domain containing 2
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955420:23,590,636...23,666,689
Ensembl chrNW_004955420:23,589,071...23,666,680
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Zzz3
zinc finger ZZ-type containing 3
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chrNW_004955423:15,523,859...15,583,742
Ensembl chrNW_004955423:15,523,522...15,583,742
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Ccnc
cyclin C
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955411:25,415,023...25,447,874
Ensembl chrNW_004955411:25,415,023...25,447,874
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Cdc14a
cell division cycle 14A
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004955435:5,099,576...5,230,252
Ensembl chrNW_004955435:5,099,107...5,248,679
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Cdc14b
cell division cycle 14B
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004955422:23,303,472...23,445,785
Ensembl chrNW_004955422:23,303,250...23,322,493
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Cdk12
cyclin dependent kinase 12
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004955451:14,244,392...14,345,885
Ensembl chrNW_004955451:14,244,978...14,309,689
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Cdk19
cyclin dependent kinase 19
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955411:35,312,722...35,411,951
Ensembl chrNW_004955411:35,312,722...35,412,246
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Cdk7
cyclin dependent kinase 7
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004955446:54,401...87,884
Ensembl chrNW_004955446:54,448...90,191
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Cdk8
cyclin dependent kinase 8
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720 PMID:24088064
RGD:9681732 RGD:9681737 RGD:9681738
NCBI chrNW_004955497:5,781,237...5,908,072
Ensembl chrNW_004955497:5,781,237...5,908,374
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Cdk9
cyclin dependent kinase 9
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004955419:874,959...883,160
Ensembl chrNW_004955419:873,289...883,160
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Ctdp1
CTD phosphatase subunit 1
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004955402:62,817,822...62,914,250
Ensembl chrNW_004955402:62,817,974...62,914,276
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Ctdsp1
CTD small phosphatase 1
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004955453:14,971,276...14,976,667
Ensembl chrNW_004955453:14,968,484...14,976,667
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Med1
mediator complex subunit 1
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955451:14,204,326...14,237,809
Ensembl chrNW_004955451:14,202,744...14,237,797
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Med10
mediator complex subunit 10
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955504:4,186,814...4,192,760
Ensembl chrNW_004955504:4,184,606...4,193,002
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Med11
mediator complex subunit 11
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955467:10,129,005...10,130,612
Ensembl chrNW_004955467:10,129,005...10,130,612
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Med12
mediator complex subunit 12
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955475:10,687,168...10,710,286
Ensembl chrNW_004955475:10,687,367...10,710,053
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Med12l
mediator complex subunit 12L
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955448:2,224,343...2,530,542
Ensembl chrNW_004955448:2,224,179...2,530,293
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Med13
mediator complex subunit 13
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955451:2,891,583...3,008,230
Ensembl chrNW_004955451:2,895,419...3,008,230
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Med13l
mediator complex subunit 13L
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955455:14,679,416...14,960,226
Ensembl chrNW_004955455:14,679,416...14,957,532
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Med14
mediator complex subunit 14
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955565:1,888,442...1,959,141
Ensembl chrNW_004955565:1,888,443...1,959,141
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Med15
mediator complex subunit 15
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955442:19,112,269...19,179,742
Ensembl chrNW_004955442:19,112,270...19,179,742
G
Med16
mediator complex subunit 16
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955495:6,939,084...6,955,885
Ensembl chrNW_004955495:6,934,078...6,959,190
G
Med17
mediator complex subunit 17
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955414:755,975...779,934
Ensembl chrNW_004955414:755,975...777,480
G
Med18
mediator complex subunit 18
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955452:7,455,138...7,464,053
Ensembl chrNW_004955452:7,455,163...7,465,061
G
Med19
mediator complex subunit 19
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955511:2,626,743...2,632,380
Ensembl chrNW_004955511:2,626,743...2,632,380
G
Med20
mediator complex subunit 20
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955437:8,246,335...8,256,987
Ensembl chrNW_004955437:8,246,335...8,256,986
G
Med21
mediator complex subunit 21
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955413:21,898,579...21,904,759
Ensembl chrNW_004955413:21,898,514...21,908,167
G
Med22
mediator complex subunit 22
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955513:2,697,812...2,704,748
Ensembl chrNW_004955513:2,697,585...2,704,748
G
Med23
mediator complex subunit 23
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955436:12,249,995...12,293,812
Ensembl chrNW_004955436:12,249,995...12,293,813
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Med24
mediator complex subunit 24
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955451:14,690,721...14,712,038
Ensembl chrNW_004955451:14,690,952...14,711,965
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Med25
mediator complex subunit 25
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955559:1,085,033...1,102,501
Ensembl chrNW_004955559:1,084,182...1,103,143
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Med26
mediator complex subunit 26
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955524:1,166,582...1,201,902
Ensembl chrNW_004955524:1,198,960...1,200,934
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Med28
mediator complex subunit 28
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955480:6,554,147...6,560,916
Ensembl chrNW_004955480:6,553,235...6,560,916
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Med29
mediator complex subunit 29
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955468:162,487...166,286
Ensembl chrNW_004955468:162,487...166,286
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Med30
mediator complex subunit 30
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955417:23,538,984...23,557,837
Ensembl chrNW_004955417:23,538,809...23,559,611
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Med31
mediator complex subunit 31
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955467:12,147,277...12,155,066
Ensembl chrNW_004955467:12,147,277...12,155,066
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Med4
mediator complex subunit 4
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955431:1,794,863...1,812,641
Ensembl chrNW_004955431:1,794,115...1,812,889
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Med6
mediator complex subunit 6
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955523:4,550,348...4,558,806
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Med7
mediator complex subunit 7
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955408:11,338,125...11,342,393
Ensembl chrNW_004955408:11,338,125...11,342,393
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Med8
mediator complex subunit 8
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955537:2,963,779...2,968,827
Ensembl chrNW_004955537:2,963,779...2,968,827
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Med9
mediator complex subunit 9
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chrNW_004955577:455,879...470,126
Ensembl chrNW_004955577:454,715...470,152
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Polr2a
RNA polymerase II subunit A
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004955467:9,423,540...9,447,530
Ensembl chrNW_004955467:9,421,256...9,447,530
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Polr2b
RNA polymerase II subunit B
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004955447:14,110,182...14,150,556
Ensembl chrNW_004955447:14,110,182...14,150,556
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Polr2c
RNA polymerase II subunit C
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004955433:15,096,324...15,104,435
Ensembl chrNW_004955433:15,096,324...15,111,846
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Polr2d
RNA polymerase II subunit D
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004955459:2,687,005...2,696,388
Ensembl chrNW_004955459:2,686,792...2,696,388
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Polr2e
RNA polymerase II, I and III subunit E
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004955495:6,779,557...6,788,241
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Polr2f
RNA polymerase II, I and III subunit F
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004955413:24,300,340...24,309,798
Ensembl chrNW_004955413:24,300,340...24,311,166
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Polr2g
RNA polymerase II subunit G
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004955599:469,233...471,761
Ensembl chrNW_004955599:464,879...471,976
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Polr2h
RNA polymerase II, I and III subunit H
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004955420:23,132,053...23,136,954
Ensembl chrNW_004955420:23,131,297...23,136,800
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Polr2i
RNA polymerase II subunit I
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004955468:2,494,120...2,495,578
Ensembl chrNW_004955468:2,494,120...2,495,578
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Polr2j
RNA polymerase II subunit J
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004955456:15,146,713...15,151,320
Ensembl chrNW_004955456:15,146,713...15,151,311
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Polr2k
RNA polymerase II, I and III subunit K
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004955417:15,412,527...15,416,090
Ensembl chrNW_004955417:15,412,527...15,416,090
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Polr2l
RNA polymerase II, I and III subunit L
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chrNW_004955476:11,291,215...11,293,536
Ensembl chrNW_004955476:11,291,215...11,293,536
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Rpap2
RNA polymerase II associated protein 2
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004955423:2,062,163...2,195,351
Ensembl chrNW_004955423:2,101,780...2,195,390
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Ssu72
SSU72 homolog, RNA polymerase II CTD phosphatase
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chrNW_004955486:9,317,078...9,338,414
Ensembl chrNW_004955486:9,317,078...9,338,414
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Clp1
cleavage factor polyribonucleotide kinase subunit 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955511:2,588,825...2,592,108
Ensembl chrNW_004955511:2,588,825...2,593,192
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Cpsf1
cleavage and polyadenylation specific factor 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955454:3,024,324...3,039,004
Ensembl chrNW_004955454:3,024,406...3,039,425
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Cpsf2
cleavage and polyadenylation specific factor 2
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955438:14,449,320...14,483,003
Ensembl chrNW_004955438:14,452,943...14,483,199
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Cpsf3
cleavage and polyadenylation specific factor 3
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955487:5,146,541...5,170,077
Ensembl chrNW_004955487:5,146,541...5,170,077
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Cpsf4
cleavage and polyadenylation specific factor 4
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955460:15,111,624...15,128,243
Ensembl chrNW_004955460:15,110,989...15,128,243
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Cpsf6
cleavage and polyadenylation specific factor 6
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955458:15,684,040...15,708,011
Ensembl chrNW_004955458:15,677,645...15,708,011
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Cpsf7
cleavage and polyadenylation specific factor 7
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955511:6,139,118...6,161,130
Ensembl chrNW_004955511:6,139,118...6,161,130
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Cstf1
cleavage stimulation factor subunit 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955445:2,816,986...2,830,971
Ensembl chrNW_004955445:2,816,732...2,830,306
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Cstf2
cleavage stimulation factor subunit 2
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955503:6,949,901...6,971,281
Ensembl chrNW_004955503:6,949,823...6,975,030
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Cstf2t
cleavage stimulation factor subunit 2 tau variant
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955425:6,830,775...6,834,799
Ensembl chrNW_004955425:6,832,580...6,834,499
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Cstf3
cleavage stimulation factor subunit 3
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955422:13,049,908...13,124,274
Ensembl chrNW_004955422:13,050,088...13,123,784
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Dxo
decapping exoribonuclease
ISO
RGD
PMID:21957020
RGD:9681741
NCBI chrNW_004955437:482,866...484,989
Ensembl chrNW_004955437:481,554...484,989
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Fip1l1
factor interacting with PAPOLA and CPSF1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955447:17,265,269...17,334,197
Ensembl chrNW_004955447:17,265,269...17,334,197
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Nudt21
nudix hydrolase 21
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955433:14,220,356...14,234,423
Ensembl chrNW_004955433:14,216,974...14,234,611
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Pcf11
PCF11 cleavage and polyadenylation factor subunit
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955414:9,401,919...9,428,501
Ensembl chrNW_004955414:9,402,818...9,428,501
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Sympk
symplekin scaffold protein
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955574:264,312...292,616
Ensembl chrNW_004955574:261,056...292,652
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Wdr33
WD repeat domain 33
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chrNW_004955459:2,740,465...2,841,376
Ensembl chrNW_004955459:2,740,466...2,841,376
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Xrn2
5'-3' exoribonuclease 2
ISO
RGD
PMID:21957020
RGD:9681741
NCBI chrNW_004955415:29,107,060...29,175,374
Ensembl chrNW_004955415:29,107,034...29,175,538
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Bdp1
BDP1 general transcription factor IIIB subunit
ISO
RGD
PMID:20890107 PMID:23031840
RGD:9588284 RGD:9685218
NCBI chrNW_004955575:330,683...430,269
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Brf1
BRF1 general transcription factor IIIB subunit
ISO
RGD
PMID:20890107 PMID:23031840
RGD:9588284 RGD:9685218
NCBI chrNW_004955538:3,469,322...3,544,704
Ensembl chrNW_004955538:3,470,249...3,544,704
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Brf2
BRF2 general transcription factor IIIB subunit
ISO
RGD
PMID:20890107 PMID:23031840
RGD:9588284 RGD:9685218
NCBI chrNW_004955463:13,549,571...13,553,946
Ensembl chrNW_004955463:13,547,071...13,554,277
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Crcp
CGRP receptor component
ISO
RGD
PMID:12391170
RGD:9685217
NCBI chrNW_004955456:8,431,161...8,479,866
Ensembl chrNW_004955456:8,431,161...8,483,181
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Gtf3a
general transcription factor IIIA
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004955497:6,836,568...6,852,177
Ensembl chrNW_004955497:6,842,960...6,851,835
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Gtf3c1
general transcription factor IIIC subunit 1
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004955493:5,651,841...5,724,426
Ensembl chrNW_004955493:5,651,841...5,724,426
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Gtf3c2
general transcription factor IIIC subunit 2
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004955469:9,295,189...9,324,171
Ensembl chrNW_004955469:9,291,360...9,324,171
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Gtf3c3
general transcription factor IIIC subunit 3
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004955403:3,610,938...3,637,893
Ensembl chrNW_004955403:3,610,913...3,641,340
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Gtf3c4
general transcription factor IIIC subunit 4
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004955513:2,037,312...2,054,451
Ensembl chrNW_004955513:2,037,312...2,054,451
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Gtf3c5
general transcription factor IIIC subunit 5
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004955513:2,304,133...2,320,977
Ensembl chrNW_004955513:2,304,133...2,321,597
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Gtf3c6
general transcription factor IIIC subunit 6
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004955411:35,609,772...35,619,448
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Maf1
MAF1 homolog, negative regulator of RNA polymerase III
ISO
RGD
PMID:23031840 PMID:23165150
RGD:9588284 RGD:9685221
NCBI chrNW_004955454:2,765,966...2,769,260
Ensembl chrNW_004955454:2,765,966...2,769,260
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Polr1c
RNA polymerase I and III subunit C
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955437:9,346,397...9,350,591
Ensembl chrNW_004955437:9,346,397...9,350,591
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Polr1d
RNA polymerase I and III subunit D
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955497:7,029,556...7,030,128
Ensembl chrNW_004955497:7,029,557...7,029,931
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Polr2e
RNA polymerase II, I and III subunit E
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955495:6,779,557...6,788,241
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Polr2f
RNA polymerase II, I and III subunit F
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955413:24,300,340...24,309,798
Ensembl chrNW_004955413:24,300,340...24,311,166
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Polr2h
RNA polymerase II, I and III subunit H
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955420:23,132,053...23,136,954
Ensembl chrNW_004955420:23,131,297...23,136,800
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Polr2k
RNA polymerase II, I and III subunit K
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955417:15,412,527...15,416,090
Ensembl chrNW_004955417:15,412,527...15,416,090
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Polr2l
RNA polymerase II, I and III subunit L
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955476:11,291,215...11,293,536
Ensembl chrNW_004955476:11,291,215...11,293,536
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Polr3a
RNA polymerase III subunit A
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955437:14,446,059...14,483,336
Ensembl chrNW_004955437:14,446,024...14,483,336
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Polr3b
RNA polymerase III subunit B
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955405:40,353,289...40,451,445
Ensembl chrNW_004955405:40,353,281...40,451,479
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Polr3c
RNA polymerase III subunit C
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955568:242,834...263,053
Ensembl chrNW_004955568:243,073...261,418
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Polr3d
RNA polymerase III subunit D
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955403:45,721,266...45,727,214
Ensembl chrNW_004955403:45,721,266...45,727,214
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Polr3e
RNA polymerase III subunit E
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955493:933,381...962,314
Ensembl chrNW_004955493:933,381...962,314
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Polr3f
RNA polymerase III subunit F
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955415:27,022,081...27,036,475
Ensembl chrNW_004955415:27,022,081...27,036,475
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Polr3g
RNA polymerase III subunit G
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955418:21,116,812...21,149,818
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Polr3gl
RNA polymerase III subunit GL
ISO
RGD
PMID:20890107
RGD:9685218
NCBI chrNW_004955568:120,475...129,990
Ensembl chrNW_004955568:120,475...129,990
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Polr3h
RNA polymerase III subunit H
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955413:27,065,785...27,072,432
Ensembl chrNW_004955413:27,065,785...27,072,432
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Polr3k
RNA polymerase III subunit K
ISO
RGD
PMID:12391170 PMID:20890107
RGD:9685217 RGD:9685218
NCBI chrNW_004955442:17,101,585...17,106,689
Ensembl chrNW_004955442:17,101,585...17,106,689
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Pou2f1
POU class 2 homeobox 1
ISO
RGD
PMID:20890107
RGD:9685218
NCBI chrNW_004955462:9,545,122...9,710,190
Ensembl chrNW_004955462:9,553,415...9,710,188
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Rb1
RB transcriptional corepressor 1
ISO
RGD
PMID:23063750
RGD:9685222
NCBI chrNW_004955431:1,960,765...2,124,576
Ensembl chrNW_004955431:1,960,661...2,124,576
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Snapc1
small nuclear RNA activating complex polypeptide 1
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004955466:7,953,559...7,979,083
Ensembl chrNW_004955466:7,953,408...7,979,301
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Snapc2
small nuclear RNA activating complex polypeptide 2
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004955563:1,345,100...1,347,593
Ensembl chrNW_004955563:1,343,085...1,347,496
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Snapc3
small nuclear RNA activating complex polypeptide 3
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004955434:18,275,301...18,310,682
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Snapc4
small nuclear RNA activating complex polypeptide 4
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004955513:4,330,579...4,349,136
Ensembl chrNW_004955513:4,330,293...4,350,012
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Snapc5
small nuclear RNA activating complex polypeptide 5
ISO
RGD
PMID:23031840
RGD:9588284
NCBI chrNW_004955450:9,176,462...9,197,592
Ensembl chrNW_004955450:9,176,462...9,197,592
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Sub1
SUB1 regulator of transcription
ISO
RGD
PMID:23128323 PMID:23165150
RGD:9685220 RGD:9685221
NCBI chrNW_004955426:18,380,680...18,394,627
Ensembl chrNW_004955426:18,380,117...18,394,627
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Tbp
TATA-box binding protein
ISO
RGD
PMID:20890107 PMID:23031840
RGD:9588284 RGD:9685218
NCBI chrNW_004955411:3,268,147...3,285,567
Ensembl chrNW_004955411:3,268,147...3,285,077
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Znf143
zinc finger protein 143
ISO
RGD
PMID:20890107
RGD:9685218
NCBI chrNW_004955414:25,220,574...25,252,962
Ensembl chrNW_004955414:25,221,440...25,255,175
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Aar2
AAR2 splicing factor
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chrNW_004955422:25,306,056...25,335,572
Ensembl chrNW_004955422:25,315,765...25,335,630
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Aqr
aquarius intron-binding spliceosomal factor
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955416:2,214,990...2,304,924
Ensembl chrNW_004955416:2,215,490...2,304,726
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Bcas2
BCAS2 pre-mRNA processing factor
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955435:17,830,532...17,857,360
Ensembl chrNW_004955435:17,846,466...17,857,356
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Bud31
BUD31 homolog
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955460:15,083,472...15,092,217
Ensembl chrNW_004955460:15,083,472...15,092,217
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Ccdc12
coiled-coil domain containing 12
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955420:25,212,888...25,257,733
Ensembl chrNW_004955420:25,212,422...25,257,741
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Cdc5l
cell division cycle 5 like
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955437:9,990,613...10,032,034
Ensembl chrNW_004955437:9,990,613...10,032,034
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Crnkl1
crooked neck pre-mRNA splicing factor 1
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955415:28,158,351...28,171,335
Ensembl chrNW_004955415:28,158,351...28,172,055
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Ctnnbl1
catenin beta like 1
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955445:18,809,389...18,975,858
Ensembl chrNW_004955445:18,809,023...18,976,255
G
Cwc15
CWC15 spliceosome associated protein homolog
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955605:32,721...42,981
Ensembl chrNW_004955605:32,721...46,182
G
Ddx23
DEAD-box helicase 23
ISO
RGD
PMID:19239890 PMID:23454554
RGD:9686089 RGD:9686093
NCBI chrNW_004955500:7,685,954...7,698,880
Ensembl chrNW_004955500:7,685,954...7,695,765
G
Ddx39b
DExD-box helicase 39B
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chrNW_004955437:72,835...84,045
Ensembl chrNW_004955437:72,835...84,384
G
Ddx42
DEAD-box helicase 42
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955478:8,009,155...8,052,990
Ensembl chrNW_004955478:8,010,056...8,041,449
G
Ddx46
DEAD-box helicase 46
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chrNW_004955408:29,981,509...30,031,473
Ensembl chrNW_004955408:29,981,229...30,031,473
G
Dhx15
DEAH-box helicase 15
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chrNW_004955480:451,126...502,226
Ensembl chrNW_004955480:451,126...502,226
G
Dhx16
DEAH-box helicase 16
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chrNW_004955583:657,425...668,390
Ensembl chrNW_004955583:654,921...668,392
G
Dhx38
DEAH-box helicase 38
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chrNW_004955484:4,752,834...4,770,843
Ensembl chrNW_004955484:4,752,834...4,770,843
G
Dhx8
DEAH-box helicase 8
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chrNW_004955451:16,941,422...16,963,690
Ensembl chrNW_004955451:16,941,215...16,965,093
G
Eftud2
elongation factor Tu GTP binding domain containing 2
ISO
RGD
PMID:23454554 PMID:23592432
RGD:9686090 RGD:9686093
NCBI chrNW_004955451:17,655,659...17,690,117
Ensembl chrNW_004955451:17,653,125...17,690,117
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Eif4a3
eukaryotic translation initiation factor 4A3
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chrNW_004955506:2,749,534...2,760,873
Ensembl chrNW_004955506:2,749,534...2,760,873
G
Hnrnpa0
heterogeneous nuclear ribonucleoprotein A0
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955408:32,718,736...32,719,409
G
Hnrnpa1
heterogeneous nuclear ribonucleoprotein A1
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955458:1,530,163...1,536,874
G
Hnrnpa2b1
heterogeneous nuclear ribonucleoprotein A2/B1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955410:28,032,193...28,042,459
Ensembl chrNW_004955410:28,032,193...28,042,459
G
Hnrnpa3
heterogeneous nuclear ribonucleoprotein A3
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955403:19,540,814...19,548,417
Ensembl chrNW_004955403:19,544,842...19,548,417
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Hnrnpab
heterogeneous nuclear ribonucleoprotein A/B
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955408:2,060,288...2,064,998
Ensembl chrNW_004955408:2,060,829...2,065,416
G
Hnrnpc
heterogeneous nuclear ribonucleoprotein C
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955550:1,949,975...2,002,297
Ensembl chrNW_004955550:1,949,975...2,002,297
G
Hnrnpd
heterogeneous nuclear ribonucleoprotein D
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955433:6,452,931...6,470,209
Ensembl chrNW_004955433:6,454,454...6,469,904
G
Hnrnph1
heterogeneous nuclear ribonucleoprotein H1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955408:937,706...944,969
Ensembl chrNW_004955408:936,595...948,064
G
Hnrnph3
heterogeneous nuclear ribonucleoprotein H3
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955425:20,619,212...20,631,915
Ensembl chrNW_004955425:20,619,291...20,631,915
G
Hnrnpk
heterogeneous nuclear ribonucleoprotein K
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955432:3,246,090...3,257,774
Ensembl chrNW_004955432:3,246,092...3,257,774
G
Hnrnpl
heterogeneous nuclear ribonucleoprotein L
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955468:668,177...683,540
Ensembl chrNW_004955468:670,559...683,540
G
Hnrnpm
heterogeneous nuclear ribonucleoprotein M
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955563:933,824...975,064
G
Hnrnpr
heterogeneous nuclear ribonucleoprotein R
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955452:3,318,536...3,354,725
Ensembl chrNW_004955452:3,315,133...3,355,508
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Hnrnpu
heterogeneous nuclear ribonucleoprotein U
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554
G
Hspa8
heat shock protein family A (Hsp70) member 8
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
G
Isy1
ISY1 splicing factor homolog
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955429:13,513,191...13,527,516
Ensembl chrNW_004955429:13,511,914...13,527,516
G
Lsm2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955437:321,367...325,556
Ensembl chrNW_004955437:320,768...325,810
G
Lsm3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955429:16,968,490...16,977,517
Ensembl chrNW_004955429:16,968,490...16,977,517
G
Lsm4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955524:3,157,607...3,165,196
Ensembl chrNW_004955524:3,157,607...3,165,196
G
Lsm5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955617:42,829...47,999
Ensembl chrNW_004955617:42,447...47,999
G
Lsm6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955428:1,931,684...1,944,445
Ensembl chrNW_004955428:1,930,937...1,946,246
G
Lsm7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955495:5,829,976...5,836,785
Ensembl chrNW_004955495:5,829,247...5,836,900
G
Lsm8
LSM8 homolog, U6 small nuclear RNA associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955432:23,818,036...23,823,550
Ensembl chrNW_004955432:23,818,227...23,823,382
G
Magohb
mago homolog B, exon junction complex subunit
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chrNW_004955413:7,195,078...7,201,659
Ensembl chrNW_004955413:7,194,798...7,201,969
G
Mbnl1
muscleblind like splicing regulator 1
ISO
RGD
PMID:23498935
RGD:9686382
NCBI chrNW_004955448:3,864,862...4,065,122
Ensembl chrNW_004955448:3,864,843...4,065,122
G
Plrg1
pleiotropic regulator 1
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955471:8,764,465...8,777,396
Ensembl chrNW_004955471:8,763,971...8,777,396
G
Pnn
pinin, desmosome associated protein
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chrNW_004955409:22,102,016...22,110,505
G
Ppie
peptidylprolyl isomerase E
ISO
RGD
PMID:18544344 PMID:23742842
RGD:9686094 RGD:9686376
NCBI chrNW_004955452:17,242,255...17,256,776
Ensembl chrNW_004955452:17,242,286...17,254,860
G
Ppig
peptidylprolyl isomerase G
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chrNW_004955449:4,915,747...4,958,456
Ensembl chrNW_004955449:4,915,753...4,958,220
G
Ppih
peptidylprolyl isomerase H
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chrNW_004955537:2,211,566...2,229,444
Ensembl chrNW_004955537:2,211,410...2,230,452
G
Ppil1
peptidylprolyl isomerase like 1
ISO
RGD
PMID:18544344 PMID:23742842
RGD:9686094 RGD:9686376
NCBI chrNW_004955437:6,131,013...6,143,474
Ensembl chrNW_004955437:6,131,013...6,143,529
G
Ppil2
peptidylprolyl isomerase like 2
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chrNW_004955442:17,426,154...17,449,079
Ensembl chrNW_004955442:17,425,231...17,449,832
G
Ppil3
peptidylprolyl isomerase like 3
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chrNW_004955403:640,956...648,498
Ensembl chrNW_004955403:640,956...648,604
G
Prpf18
pre-mRNA processing factor 18
ISO
RGD
PMID:24452469
RGD:9686092
NCBI chrNW_004955429:20,581,457...20,613,258
Ensembl chrNW_004955429:20,581,457...20,613,257
G
Prpf19
pre-mRNA processing factor 19
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955511:5,546,212...5,552,368
Ensembl chrNW_004955511:5,545,989...5,557,792
G
Prpf3
pre-mRNA processing factor 3
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004955413:429,259...455,449
Ensembl chrNW_004955413:429,259...455,463
G
Prpf31
pre-mRNA processing factor 31
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004955604:125,489...136,209
Ensembl chrNW_004955604:124,686...136,901
G
Prpf4
pre-mRNA splicing tri-snRNP complex factor PRPF4
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004955419:14,190,146...14,206,086
Ensembl chrNW_004955419:14,190,152...14,206,086
G
Prpf8
pre-mRNA processing factor 8
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chrNW_004955481:1,499,634...1,530,670
Ensembl chrNW_004955481:1,499,634...1,530,670
G
Ptbp1
polypyrimidine tract binding protein 1
ISO
RGD
PMID:23385723
RGD:9686381
NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492
G
Ptbp2
polypyrimidine tract binding protein 2
ISO
RGD
PMID:23498935
RGD:9686382
NCBI chrNW_004955435:1,703,588...1,773,016
Ensembl chrNW_004955435:1,702,962...1,774,334
G
Qki
QKI, KH domain containing RNA binding
ISO
RGD
PMID:23385723
RGD:9686381
NCBI chrNW_004955439:17,925,205...18,079,727
Ensembl chrNW_004955439:17,925,229...18,079,727
G
Rbm22
RNA binding motif protein 22
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955415:3,895,272...3,905,801
G
Rbm8a
RNA binding motif protein 8A
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chrNW_004955568:164,050...166,162
Ensembl chrNW_004955568:164,050...166,162
G
Rbmx
RNA binding motif protein X-linked
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955489:8,280,842...8,286,252
Ensembl chrNW_004955489:8,280,794...8,286,252
G
Rnps1
RNA binding protein with serine rich domain 1
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chrNW_004955442:14,995,404...15,009,358
Ensembl chrNW_004955442:14,995,404...15,009,358
G
Sart3
spliceosome associated factor 3, U4/U6 recycling protein
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chrNW_004955455:9,802,260...9,833,326
Ensembl chrNW_004955455:9,802,260...9,832,957
G
Sf1
splicing factor 1
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004955422:20,391,340...20,406,555
Ensembl chrNW_004955422:20,391,722...20,551,870
G
Sf3a1
splicing factor 3a subunit 1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955455:4,579,153...4,601,942
Ensembl chrNW_004955455:4,577,329...4,602,141
G
Sf3a2
splicing factor 3a subunit 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955495:5,896,648...5,904,287
Ensembl chrNW_004955495:5,896,648...5,904,056
G
Sf3a3
splicing factor 3a subunit 3
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955452:15,691,729...15,715,782
Ensembl chrNW_004955452:15,691,497...15,716,524
G
Sf3b1
splicing factor 3b subunit 1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955403:3,134,960...3,163,395
Ensembl chrNW_004955403:3,134,955...3,166,121
G
Sf3b2
splicing factor 3b subunit 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955422:19,242,041...19,266,479
Ensembl chrNW_004955422:19,240,974...19,257,104
G
Sf3b3
splicing factor 3b subunit 3
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955484:3,307,794...3,357,600
Ensembl chrNW_004955484:3,307,794...3,357,600
G
Sf3b4
splicing factor 3b subunit 4
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955413:826,190...830,502
Ensembl chrNW_004955413:826,190...832,496
G
Sf3b5
splicing factor 3b subunit 5
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955436:16,380,412...16,381,373
Ensembl chrNW_004955436:16,380,549...16,380,809
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Sf3b6
splicing factor 3b subunit 6
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955469:6,275,894...6,286,908
Ensembl chrNW_004955469:6,275,900...6,286,908
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Slu7
SLU7 homolog, splicing factor
ISO
RGD
PMID:24452469
RGD:9686092
NCBI chrNW_004955408:14,268,958...14,288,114
Ensembl chrNW_004955408:14,267,369...14,288,213
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Snrnp200
small nuclear ribonucleoprotein U5 subunit 200
ISO
RGD
PMID:23454554 PMID:23592432
RGD:9686090 RGD:9686093
NCBI chrNW_004955470:3,828,943...3,856,059
Ensembl chrNW_004955470:3,828,943...3,856,236
G
Snrnp70
small nuclear ribonucleoprotein U1 subunit 70
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chrNW_004955559:1,618,246...1,634,144
Ensembl chrNW_004955559:1,614,039...1,634,142
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Snrpa
small nuclear ribonucleoprotein polypeptide A
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chrNW_004955578:579,087...590,010
Ensembl chrNW_004955578:579,087...590,010
G
Snrpa1
small nuclear ribonucleoprotein polypeptide A'
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955416:28,166,885...28,178,404
Ensembl chrNW_004955416:28,166,821...28,178,404
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Snrpb
small nuclear ribonucleoprotein polypeptides B and B1
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955415:13,522,638...13,530,725
Ensembl chrNW_004955415:13,520,530...13,531,466
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Snrpb2
small nuclear ribonucleoprotein polypeptide B2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955415:25,880,013...25,889,295
Ensembl chrNW_004955415:25,879,983...25,890,707
G
Snrpc
small nuclear ribonucleoprotein polypeptide C
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chrNW_004955437:2,770,251...2,830,871
Ensembl chrNW_004955437:2,813,296...2,831,036
G
Snrpd1
small nuclear ribonucleoprotein D1 polypeptide
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955402:10,283,970...10,294,869
Ensembl chrNW_004955402:10,283,970...10,296,495
G
Snrpd2
small nuclear ribonucleoprotein D2 polypeptide
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955574:157,769...164,947
Ensembl chrNW_004955574:157,769...164,947
G
Snrpd3
small nuclear ribonucleoprotein D3 polypeptide
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955455:8,021,946...8,045,325
Ensembl chrNW_004955455:8,021,946...8,046,439
G
Snrpe
small nuclear ribonucleoprotein polypeptide E
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955406:39,725,841...39,732,527
Ensembl chrNW_004955406:39,725,446...39,734,586
G
Snrpf
small nuclear ribonucleoprotein polypeptide F
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955405:32,236,876...32,242,716
Ensembl chrNW_004955405:32,236,876...32,242,716
G
Snrpg
small nuclear ribonucleoprotein polypeptide G
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955424:14,844,318...14,851,720
Ensembl chrNW_004955424:14,844,318...14,851,720
G
Snu13
small nuclear ribonucleoprotein 13
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004955413:27,160,985...27,172,648
Ensembl chrNW_004955413:27,159,816...27,172,696
G
Snw1
SNW domain containing 1
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492
G
Srrm1
serine and arginine repetitive matrix 1
ISO
RGD
PMID:15145352 PMID:17537823
RGD:9686091 RGD:9686404
NCBI chrNW_004955452:4,401,089...4,433,986
Ensembl chrNW_004955452:4,401,089...4,435,391
G
Srrm2
serine/arginine repetitive matrix 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955442:14,478,350...14,498,152
Ensembl chrNW_004955442:14,482,154...14,497,639
G
Srrm4
serine/arginine repetitive matrix 4
ISO
RGD
PMID:23498935
RGD:9686382
NCBI chrNW_004955455:12,318,529...12,473,420
Ensembl chrNW_004955455:12,318,529...12,473,647
G
Srsf1
serine and arginine rich splicing factor 1
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955451:4,992,634...4,996,619
Ensembl chrNW_004955451:4,992,634...4,999,029
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Srsf10
serine and arginine rich splicing factor 10
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955452:3,831,545...3,846,292
Ensembl chrNW_004955452:3,831,552...3,846,449
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Srsf11
serine and arginine rich splicing factor 11
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955423:21,669,925...21,706,260
Ensembl chrNW_004955423:21,669,471...21,706,327
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Srsf12
serine and arginine rich splicing factor 12
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955411:15,851,482...15,918,864
G
Srsf2
serine and arginine rich splicing factor 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955506:5,569,280...5,572,164
Ensembl chrNW_004955506:5,569,302...5,570,120
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Srsf3
serine and arginine rich splicing factor 3
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955437:6,306,151...6,314,332
Ensembl chrNW_004955437:6,306,151...6,314,332
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Srsf4
serine and arginine rich splicing factor 4
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955452:8,143,850...8,174,830
Ensembl chrNW_004955452:8,142,500...8,174,869
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Srsf5
serine and arginine rich splicing factor 5
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955466:612,221...617,087
Ensembl chrNW_004955466:612,221...617,753
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Srsf6
serine and arginine rich splicing factor 6
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955445:13,663,474...13,669,102
Ensembl chrNW_004955445:13,661,209...13,669,102
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Srsf7
serine and arginine rich splicing factor 7
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955441:6,416,709...6,423,185
Ensembl chrNW_004955441:6,416,952...6,423,074
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Srsf9
serine and arginine rich splicing factor 9
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chrNW_004955455:11,175,760...11,183,597
Ensembl chrNW_004955455:11,175,760...11,183,597
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Syf2
SYF2 pre-mRNA splicing factor
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955452:4,850,049...4,856,647
Ensembl chrNW_004955452:4,848,659...4,857,114
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Syncrip
synaptotagmin binding cytoplasmic RNA interacting protein
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chrNW_004955411:13,068,078...13,096,936
Ensembl chrNW_004955411:13,066,789...13,096,938
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Tial1
TIA1 cytotoxic granule associated RNA binding protein like 1
ISO
RGD
PMID:23385723
RGD:9686381
NCBI chrNW_004955551:370,792...395,836
Ensembl chrNW_004955551:370,792...395,836
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Txnl4a
thioredoxin like 4A
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004955402:63,153,274...63,166,208
Ensembl chrNW_004955402:63,153,052...63,166,199
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U2af1
U2 small nuclear RNA auxiliary factor 1
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004955407:38,895,741...38,909,820
Ensembl chrNW_004955407:38,895,711...38,909,820
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U2af2
U2 small nuclear RNA auxiliary factor 2
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chrNW_004955567:683,472...699,105
Ensembl chrNW_004955567:683,078...697,996
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Xab2
XPA binding protein 2
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chrNW_004955563:1,630,403...1,638,333
Ensembl chrNW_004955563:1,630,403...1,641,037
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Clp1
cleavage factor polyribonucleotide kinase subunit 1
ISO
RGD
PMID:25071838
RGD:9685342
NCBI chrNW_004955511:2,588,825...2,592,108
Ensembl chrNW_004955511:2,588,825...2,593,192
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Elac1
elaC ribonuclease Z 1
ISO
RGD
PMID:21572561
RGD:9685334
NCBI chrNW_004955402:35,904,552...35,918,120
Ensembl chrNW_004955402:35,904,553...35,918,111
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Elac2
elaC ribonuclease Z 2
ISO
RGD
PMID:21572561
RGD:9685334
NCBI chrNW_004955467:4,406,947...4,428,769
Ensembl chrNW_004955467:4,406,824...4,427,780
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Pop1
POP1 homolog, ribonuclease P/MRP subunit
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004955417:13,823,027...13,856,448
Ensembl chrNW_004955417:13,823,057...13,856,448
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Pop4
POP4 homolog, ribonuclease P/MRP subunit
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004955468:7,983,394...7,994,863
Ensembl chrNW_004955468:7,983,394...7,994,453
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Pop5
POP5 homolog, ribonuclease P/MRP subunit
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004955455:11,069,131...11,071,814
Ensembl chrNW_004955455:11,069,131...11,071,814
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Pop7
POP7 homolog, ribonuclease P/MRP subunit
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004955573:217,809...218,915
Ensembl chrNW_004955573:215,932...218,976
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Rpp14
ribonuclease P/MRP subunit p14
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004955430:1,794,460...1,802,527
Ensembl chrNW_004955430:1,794,460...1,802,527
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Rpp21
ribonuclease P/MRP subunit p21
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004955583:467,197...468,564
Ensembl chrNW_004955583:467,256...468,513
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Rpp25
ribonuclease P and MRP subunit p25
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004955450:3,026,257...3,027,683
Ensembl chrNW_004955450:3,026,502...3,027,065
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Rpp30
ribonuclease P/MRP subunit p30
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004955425:2,276,006...2,302,882
Ensembl chrNW_004955425:2,273,980...2,303,314
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Rpp38
ribonuclease P/MRP subunit p38
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004955429:19,358,765...19,360,973
Ensembl chrNW_004955429:19,358,765...19,360,973
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Rpp40
ribonuclease P/MRP subunit p40
ISO
RGD
PMID:19931535
RGD:9685326
NCBI chrNW_004955465:8,540,500...8,550,255
Ensembl chrNW_004955465:8,540,459...8,550,249
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Rtcb
RNA 2',3'-cyclic phosphate and 5'-OH ligase
ISO
RGD
PMID:25071838
RGD:9685342
NCBI chrNW_004955405:41,360,370...41,375,215
Ensembl chrNW_004955405:41,360,370...41,375,215
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Ssb
small RNA binding exonuclease protection factor La
ISO
RGD
PMID:21572561
RGD:9685334
NCBI chrNW_004955449:4,806,468...4,815,175
G
Tsen15
tRNA splicing endonuclease subunit 15
ISO
RGD
PMID:25071838
RGD:9685342
NCBI chrNW_004955406:22,787,090...22,806,231
Ensembl chrNW_004955406:22,786,856...22,808,329
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Tsen2
tRNA splicing endonuclease subunit 2
ISO
RGD
PMID:25071838
RGD:9685342
NCBI chrNW_004955429:14,970,105...14,997,459
Ensembl chrNW_004955429:14,969,289...14,997,220
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Tsen34
tRNA splicing endonuclease subunit 34
ISO
RGD
PMID:25071838
RGD:9685342
NCBI chrNW_004955604:84,072...89,419
Ensembl chrNW_004955604:84,072...89,419
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Tsen54
tRNA splicing endonuclease subunit 54
ISO
RGD
PMID:25071838
RGD:9685342
NCBI chrNW_004955553:2,367,476...2,376,704
Ensembl chrNW_004955553:2,367,480...2,376,704
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all