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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:aminoacyl-tRNA biosynthetic pathway
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Accession:PW:0001159 term browser browse the term
Definition:Aminoacyl-tRNA, or transfer RNA (tRNA) carries amino acids to ribosomes and is part of the translation pathway. tRNAs are specific for the amino acids with which they are associated. Their synthesis involves adenylation of the amino acid followed by its transfer; both steps require ATP.
Synonyms:related_synonym: tRNA Aminoacylation



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aminoacyl-tRNA biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147
JBrowse link
G Aars2 alanyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 9:15,484,639...15,496,116
Ensembl chr 9:15,297,531...15,496,090
JBrowse link
G Cars1 cysteinyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 1:198,753,689...198,796,016
Ensembl chr 1:198,753,691...198,795,941
JBrowse link
G Dars1 aspartyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr13:39,857,936...39,913,055
Ensembl chr13:39,857,936...39,913,116
JBrowse link
G Dars2 aspartyl-tRNA synthetase 2 (mitochondrial) IEA KEGG rno:00970 NCBI chr13:73,308,726...73,336,558
Ensembl chr13:73,308,726...73,336,934
JBrowse link
G Ears2 glutamyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 1:176,597,986...176,625,848
Ensembl chr 1:176,597,986...176,625,836
JBrowse link
G Eprs1 glutamyl-prolyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr13:96,901,548...96,971,966
Ensembl chr13:96,901,575...96,971,966
JBrowse link
G Fars2 phenylalanyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr17:28,319,215...28,746,217
Ensembl chr17:28,319,280...28,746,337
JBrowse link
G Farsa phenylalanyl-tRNA synthetase subunit alpha IEA KEGG rno:00970 NCBI chr19:23,291,409...23,300,985
Ensembl chr19:23,268,869...23,300,980
JBrowse link
G Farsb phenylalanyl-tRNA synthetase subunit beta IEA KEGG rno:00970 NCBI chr 9:79,887,852...79,947,082
Ensembl chr 9:79,887,842...79,947,045
JBrowse link
G Gars1 glycyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 4:84,171,596...84,212,609
Ensembl chr 4:84,171,596...84,212,609
JBrowse link
G Hars1 histidyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr18:28,381,649...28,398,699
Ensembl chr18:28,381,655...28,398,740
JBrowse link
G Iars1 isoleucyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr17:14,940,919...14,987,277
Ensembl chr17:14,940,924...14,987,237
JBrowse link
G Kars1 lysyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr19:39,957,846...39,976,837
Ensembl chr19:39,957,846...39,977,632
JBrowse link
G Lars1 leucyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr18:34,201,555...34,256,003
Ensembl chr18:34,201,549...34,255,931
JBrowse link
G Lars2 leucyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 8:123,010,271...123,106,395
Ensembl chr 8:123,010,293...123,106,395
JBrowse link
G Mars1 methionyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 7:63,121,142...63,138,550
Ensembl chr 7:63,121,142...63,138,495
JBrowse link
G Mars2 methionyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 9:56,720,408...56,729,991
Ensembl chr 9:56,720,983...56,723,820
JBrowse link
G Mtfmt mitochondrial methionyl-tRNA formyltransferase IEA KEGG rno:00970 NCBI chr 8:65,953,787...65,971,841
Ensembl chr 8:65,953,767...65,971,841
JBrowse link
G Nars1 asparaginyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr18:57,989,308...58,005,584
Ensembl chr18:57,989,308...58,005,622
JBrowse link
G Nars2 asparaginyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 1:151,300,446...151,412,086
Ensembl chr 1:151,300,467...151,413,521
JBrowse link
G Pars2 prolyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 5:121,433,993...121,439,158
Ensembl chr 5:121,434,096...121,439,154
JBrowse link
G Qars1 glutaminyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 8:109,207,705...109,215,738
Ensembl chr 8:109,207,705...109,215,739
JBrowse link
G Rars1 arginyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr10:20,270,744...20,295,192
Ensembl chr10:20,270,483...20,295,196
JBrowse link
G Rars2 arginyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 5:49,181,517...49,238,664
Ensembl chr 5:49,181,565...49,233,276
JBrowse link
G Sars1 seryl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 2:196,065,543...196,081,240
Ensembl chr 2:196,065,430...196,081,277
JBrowse link
G Sars2 seryl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 1:84,028,972...84,040,725
Ensembl chr 1:84,028,986...84,040,725
JBrowse link
G Tars1 threonyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 2:60,368,893...60,387,715
Ensembl chr 2:60,367,796...60,387,717
JBrowse link
G Tars2 threonyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr 2:183,293,095...183,310,210
Ensembl chr 2:183,293,097...183,310,184
JBrowse link
G Tars3 threonyl-tRNA synthetase 3 IEA KEGG rno:00970 NCBI chr 1:119,213,189...119,265,492
Ensembl chr 1:119,213,213...119,265,488
JBrowse link
G Vars1 valyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr20:3,805,774...3,820,468
Ensembl chr20:3,805,776...3,820,298
JBrowse link
G Vars2 valyl-tRNA synthetase 2, mitochondrial IEA KEGG rno:00970 NCBI chr20:3,077,132...3,087,994
Ensembl chr20:3,077,132...3,087,994
JBrowse link
G Wars1 tryptophanyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 6:127,776,088...127,807,273
Ensembl chr 6:127,776,090...127,807,269
JBrowse link
G Wars2 tryptophanyl tRNA synthetase 2 (mitochondrial) IEA KEGG rno:00970 NCBI chr 2:186,459,744...186,543,581
Ensembl chr 2:186,459,444...186,543,571
JBrowse link
G Yars1 tyrosyl-tRNA synthetase 1 IEA KEGG rno:00970 NCBI chr 5:141,535,815...141,564,029
Ensembl chr 5:141,535,759...141,563,833
JBrowse link
G Yars2 tyrosyl-tRNA synthetase 2 IEA KEGG rno:00970 NCBI chr11:84,632,350...84,638,138
Ensembl chr11:84,624,369...84,638,125
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6092
    regulatory pathway 3871
      pathway pertinent to DNA replication and repair, cell cycle, maintenance of genomic integrity, RNA and protein biosynthesis 1752
        translation pathway 264
          aminoacyl-tRNA biosynthetic pathway 36
paths to the root