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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:ribosome biogenesis pathway
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Accession:PW:0001066 term browser browse the term
Definition:The pathway of ribosome biogenesis starts with the transcription of rRNA precursors, and involves the co-transciptional events of pre-rRNA processing and the assembly of pre-ribosomal particles. The maturation of pre-40S and pre-60S particles follows independent routes. Once in the cytoplasm, additional steps yield the mature, translation-competent ribosome. Alterations in the pathway result in specific phenotypes collectively known as ribosomopathies.
Synonyms:related_synonym: ribosome biogenesis
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ribosome biogenesis pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 1700009N14Rikl RIKEN cDNA 1700009N14 gene like IEA KEGG rno:03008 NCBI chr 5:54,456,005...54,457,381
Ensembl chr 5:54,455,893...54,457,677 		JBrowse link
G Afg2a AFG2 AAA ATPase homolog A IEA KEGG rno:03008 NCBI chr 2:120,306,417...120,497,707
Ensembl chr 2:120,306,412...120,497,705 		JBrowse link
G Bms1 BMS1 ribosome biogenesis factor IEA
ISO		 KEGG
RGD		 PMID:24550520 rno:03008, RGD:9999445 NCBI chr 4:151,558,163...151,595,187
Ensembl chr 4:151,558,163...151,595,127 		JBrowse link
G Bop1 BOP1 ribosomal biogenesis factor ISO RGD PMID:25346433 PMID:23439679 RGD:9999448, RGD:9999449 NCBI chr 7:108,172,062...108,195,875
Ensembl chr 7:108,172,066...108,195,931 		JBrowse link
G Bysl bystin-like ISO RGD PMID:25346433 PMID:23439679 PMID:24424021 RGD:9999448, RGD:9999449, RGD:10002751 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339 		JBrowse link
G C1d C1D nuclear receptor corepressor ISO RGD PMID:25346433 RGD:9999448 NCBI chr14:91,660,951...91,673,177
Ensembl chr14:91,660,989...91,672,852 		JBrowse link
G Csnk1d casein kinase 1, delta ISO RGD PMID:24424021 RGD:10002751 NCBI chr10:106,221,992...106,256,620
Ensembl chr10:106,221,992...106,256,614 		JBrowse link
G Csnk1e casein kinase 1, epsilon ISO RGD PMID:24424021 RGD:10002751 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 IEA KEGG rno:03008 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696 		JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 IEA KEGG rno:03008 NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080 		JBrowse link
G Csnk2b casein kinase 2 beta IEA KEGG rno:03008 NCBI chr20:3,700,363...3,705,331
Ensembl chr20:3,698,733...3,707,133 		JBrowse link
G Ddx10 DEAD-box helicase 10 ISO RGD PMID:22922795 RGD:10002738 NCBI chr 8:53,488,656...53,643,373
Ensembl chr 8:53,488,656...53,643,373 		JBrowse link
G Ddx18 DEAD-box helicase 18 ISO RGD PMID:22922795 RGD:10002738 NCBI chr13:32,729,697...32,743,161
Ensembl chr13:32,729,700...32,743,161 		JBrowse link
G Ddx24 DEAD-box helicase 24 ISO RGD PMID:22922795 RGD:10002738 NCBI chr 6:122,564,767...122,582,032
Ensembl chr 6:122,564,767...122,581,927 		JBrowse link
G Ddx56 DEAD-box helicase 56 ISO RGD PMID:22922795 RGD:10002738 NCBI chr14:81,112,008...81,122,331
Ensembl chr14:81,112,012...81,122,333 		JBrowse link
G Dhx15 DEAH-box helicase 15 ISO RGD PMID:22922795 RGD:10002738 NCBI chr14:58,787,147...58,825,083
Ensembl chr14:58,787,127...58,825,088 		JBrowse link
G Dhx37 DEAH-box helicase 37 ISO RGD PMID:22922795 RGD:10002738 NCBI chr12:31,194,782...31,214,890
Ensembl chr12:31,194,859...31,216,802 		JBrowse link
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease ISO RGD PMID:25346433 RGD:9999448 NCBI chr15:75,820,040...75,850,450
Ensembl chr15:75,823,436...75,850,642 		JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 IEA
ISO		 KEGG
RGD		 PMID:22065625 rno:03008, RGD:9999451
G Efl1 elongation factor like GTPase 1 IEA KEGG rno:03008 NCBI chr 1:136,638,527...136,763,518
Ensembl chr 1:136,638,527...136,763,518 		JBrowse link
G Eif6 eukaryotic translation initiation factor 6 IEA
ISO		 KEGG
RGD		 PMID:19373251 rno:03008, RGD:10002774 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401 		JBrowse link
G Emg1 EMG1 N1-specific pseudouridine methyltransferase IEA KEGG rno:03008 NCBI chr 4:157,509,258...157,517,540
Ensembl chr 4:157,509,277...157,517,540 		JBrowse link
G Eri1 exoribonuclease 1 ISO RGD PMID:25346433 RGD:9999448 NCBI chr16:56,724,101...56,744,228
Ensembl chr16:56,724,115...56,744,226 		JBrowse link
G Exosc10 exosome component 10 ISO RGD PMID:24550520 RGD:9999445 NCBI chr 5:158,995,313...159,018,940
Ensembl chr 5:158,995,313...159,018,940 		JBrowse link
G Exosc5 exosome component 5 ISO RGD PMID:24550520 RGD:9999445 NCBI chr 1:81,168,128...81,177,266
Ensembl chr 1:81,166,023...81,177,265 		JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:203,350,226...203,351,741
Ensembl chr 1:203,350,189...203,351,742 		JBrowse link
G Fbl fibrillarin IEA
ISO		 KEGG
RGD		 PMID:22065625 rno:03008, RGD:9999451 NCBI chr 1:83,469,832...83,478,932
Ensembl chr 1:83,469,832...83,478,932 		JBrowse link
G Fbll1 fibrillarin-like 1 IEA KEGG rno:03008 NCBI chr10:20,258,656...20,260,299
Ensembl chr10:20,258,656...20,260,299 		JBrowse link
G Fcf1 Fcf1 rRNA-processing protein ISO RGD PMID:24550520 RGD:9999445 NCBI chr 6:104,617,780...104,629,643
Ensembl chr 6:104,617,770...104,629,643 		JBrowse link
G Gar1 GAR1 ribonucleoprotein IEA
ISO		 KEGG
RGD		 PMID:22065625 rno:03008, RGD:9999451 NCBI chr 2:218,375,231...218,382,509
Ensembl chr 2:218,375,353...218,382,524 		JBrowse link
G Gnl2 G protein nucleolar 2 IEA
ISO		 KEGG
RGD		 PMID:24240281 rno:03008, RGD:10002740 NCBI chr 5:137,293,141...137,318,528
Ensembl chr 5:137,293,081...137,318,526 		JBrowse link
G Gnl3 G protein nucleolar 3 IEA KEGG rno:03008 NCBI chr16:6,207,402...6,213,491
Ensembl chr16:6,207,402...6,213,392 		JBrowse link
G Gnl3l G protein nucleolar 3 like IEA KEGG rno:03008 NCBI chr  X:19,961,277...19,994,454
Ensembl chr  X:19,958,603...19,994,508 		JBrowse link
G Gtpbp4 GTP binding protein 4 IEA KEGG rno:03008 NCBI chr17:61,308,033...61,328,184
Ensembl chr17:61,308,014...61,418,009 		JBrowse link
G Heatr1 HEAT repeat containing 1 IEA KEGG rno:03008 NCBI chr17:58,053,288...58,093,895
Ensembl chr17:58,051,700...58,093,948 		JBrowse link
G Imp3 IMP U3 small nucleolar ribonucleoprotein 3 IEA
ISO		 KEGG
RGD		 PMID:24550520 rno:03008, RGD:9999445 NCBI chr 8:57,339,528...57,340,416
Ensembl chr 8:57,339,496...57,340,414 		JBrowse link
G Imp4 IMP U3 small nucleolar ribonucleoprotein 4 IEA
ISO		 KEGG
RGD		 PMID:24550520 rno:03008, RGD:9999445 NCBI chr 9:36,654,127...36,659,265
Ensembl chr 9:36,654,401...36,660,075 		JBrowse link
G Lsg1 large 60S subunit nuclear export GTPase 1 IEA KEGG rno:03008 NCBI chr11:70,132,919...70,168,526
Ensembl chr11:70,143,847...70,168,518 		JBrowse link
G Ltv1 LTV1 ribosome biogenesis factor ISO RGD PMID:20137954 PMID:24424021 RGD:10002748, RGD:10002751 NCBI chr 1:7,565,673...7,578,398
Ensembl chr 1:7,565,669...7,578,563 		JBrowse link
G Mdn1 midasin AAA ATPase 1 IEA
ISO		 KEGG
RGD		 PMID:21763358 rno:03008, RGD:10002739 NCBI chr 5:47,055,435...47,190,426
Ensembl chr 5:47,055,447...47,186,332 		JBrowse link
G Mphosph10 M-phase phosphoprotein 10 IEA
ISO		 KEGG
RGD		 PMID:24550520 rno:03008, RGD:9999445 NCBI chr 1:117,948,134...117,964,149
Ensembl chr 1:117,948,134...117,964,149 		JBrowse link
G Mtrex Mtr4 exosome RNA helicase ISO RGD PMID:24550520 RGD:9999445 NCBI chr 2:44,500,326...44,560,624
Ensembl chr 2:44,461,444...44,560,627 		JBrowse link
G Nhp2 NHP2 ribonucleoprotein IEA
ISO		 KEGG
RGD		 PMID:22065625 rno:03008, RGD:9999451 NCBI chr10:35,877,057...35,880,399
Ensembl chr10:35,877,054...35,882,545 		JBrowse link
G Nmd3 NMD3 ribosome export adaptor IEA
ISO		 KEGG
RGD		 PMID:17509569 PMID:20137954 rno:03008, RGD:10002749, RGD:10002748 NCBI chr 2:154,012,973...154,038,466
Ensembl chr 2:154,013,020...154,039,259 		JBrowse link
G Nob1 NIN1 (RPN12) binding protein 1 homolog IEA
ISO		 KEGG
RGD		 PMID:23439679 PMID:25346433 PMID:24424021 rno:03008, RGD:9999449, RGD:9999448, RGD:10002751 NCBI chr19:35,322,803...35,335,354
Ensembl chr19:35,322,669...35,346,815 		JBrowse link
G Nol12 nucleolar protein 12 ISO RGD PMID:25346433 PMID:23439679 RGD:9999448, RGD:9999449 NCBI chr 7:110,493,294...110,498,908
Ensembl chr 7:110,493,246...110,498,907 		JBrowse link
G Nop10 NOP10 ribonucleoprotein IEA
ISO		 KEGG
RGD		 PMID:22065625 rno:03008, RGD:9999451 NCBI chr 3:99,066,857...99,067,942
Ensembl chr 3:99,066,857...99,067,942 		JBrowse link
G Nop56 NOP56 ribonucleoprotein IEA
ISO		 KEGG
RGD		 PMID:22065625 rno:03008, RGD:9999451 NCBI chr 3:117,476,963...117,481,847
Ensembl chr 3:117,477,053...117,481,841 		JBrowse link
G Nop58 NOP58 ribonucleoprotein IEA
ISO		 KEGG
RGD		 PMID:22065625 rno:03008, RGD:9999451 NCBI chr 9:61,120,939...61,144,810
Ensembl chr 9:61,120,929...61,144,810 		JBrowse link
G Nup214 nucleoporin 214 ISO RGD PMID:17509569 RGD:10002749 NCBI chr 3:15,255,111...15,340,568
Ensembl chr 3:15,255,119...15,340,568 		JBrowse link
G Nup88 nucleoporin 88 ISO RGD PMID:17509569 RGD:10002749 NCBI chr10:55,667,903...55,692,249
Ensembl chr10:55,667,906...55,692,257 		JBrowse link
G Nvl nuclear VCP-like IEA KEGG rno:03008 NCBI chr13:92,851,023...92,906,749
Ensembl chr13:92,853,650...92,906,049 		JBrowse link
G Nxf1 nuclear RNA export factor 1 IEA KEGG rno:03008 NCBI chr 1:205,655,442...205,668,637
Ensembl chr 1:205,655,375...205,668,636 		JBrowse link
G Nxf3 nuclear RNA export factor 3 IEA KEGG rno:03008 NCBI chr  X:99,025,901...99,050,409
Ensembl chr  X:99,025,901...99,039,261 		JBrowse link
G Nxf7 nuclear RNA export factor 7 IEA KEGG rno:03008 NCBI chr  X:98,535,374...98,552,562
Ensembl chr  X:98,535,375...98,552,526 		JBrowse link
G Nxt1 nuclear transport factor 2-like export factor 1 IEA KEGG rno:03008 NCBI chr 3:136,108,975...136,111,897
Ensembl chr 3:136,108,862...136,111,907 		JBrowse link
G Nxt2 nuclear transport factor 2-like export factor 2 IEA KEGG rno:03008 NCBI chr  X:105,855,616...105,862,902
Ensembl chr  X:105,855,608...105,862,899 		JBrowse link
G Pals2 protein associated with LIN7 2, MAGUK p55 family member ISO RGD PMID:25346433 RGD:9999448 NCBI chr 4:79,173,488...79,257,542
Ensembl chr 4:79,124,806...79,254,140 		JBrowse link
G Pdcd11 programmed cell death 11 ISO RGD PMID:23439679 RGD:9999449 NCBI chr 1:245,980,840...246,021,999
Ensembl chr 1:245,980,880...246,021,999 		JBrowse link
G Pes1 pescadillo ribosomal biogenesis factor 1 ISO RGD PMID:25346433 RGD:9999448 NCBI chr14:78,850,754...78,867,134
Ensembl chr14:78,850,709...78,867,134 		JBrowse link
G Pno1 partner of NOB1 homolog ISO RGD PMID:24424021 RGD:10002751 NCBI chr14:91,609,711...91,618,280
Ensembl chr14:91,609,233...91,618,324 		JBrowse link
G Pop1 POP1 homolog, ribonuclease P/MRP subunit IEA KEGG rno:03008 NCBI chr 7:65,705,348...65,733,143
Ensembl chr 7:65,705,368...65,733,141 		JBrowse link
G Pop4 POP4 homolog, ribonuclease P/MRP subunit IEA KEGG rno:03008 NCBI chr 1:90,960,026...90,968,360
Ensembl chr 1:90,960,022...90,968,443 		JBrowse link
G Pop5 POP5 homolog, ribonuclease P/MRP subunit IEA KEGG rno:03008 NCBI chr12:41,376,755...41,384,882
Ensembl chr12:41,376,755...41,381,336 		JBrowse link
G Pop7 POP7 homolog, ribonuclease P/MRP subunit IEA KEGG rno:03008 NCBI chr12:19,189,384...19,190,425
Ensembl chr12:19,189,138...19,190,674 		JBrowse link
G Prkcb protein kinase C, beta ISO RGD PMID:19373251 RGD:10002774 NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536 		JBrowse link
G Pwp2 PWP2, small subunit processome component IEA KEGG rno:03008 NCBI chr20:10,499,332...10,512,965
Ensembl chr20:10,499,363...10,513,640 		JBrowse link
G Rack1 receptor for activated C kinase 1 ISO RGD PMID:19373251 RGD:10002774 NCBI chr10:33,169,415...33,174,896
Ensembl chr10:33,169,169...33,174,975 		JBrowse link
G Ran RAN, member RAS oncogene family IEA
ISO		 KEGG
RGD		 PMID:17509569 rno:03008, RGD:10002749 NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276 		JBrowse link
G Rasl2-9 RAS-like, family 2, locus 9 IEA KEGG rno:03008 NCBI chr 1:68,720,879...68,734,930
Ensembl chr 1:68,720,879...68,722,057 		JBrowse link
G Rbm28 RNA binding motif protein 28 IEA
ISO		 KEGG
RGD		 PMID:23439679 rno:03008, RGD:9999449 NCBI chr 4:57,722,946...57,761,935
Ensembl chr 4:57,722,223...57,761,653 		JBrowse link
G Rcl1 RNA terminal phosphate cyclase-like 1 IEA
ISO		 KEGG
RGD		 PMID:24550520 rno:03008, RGD:9999445 NCBI chr 1:226,824,561...226,869,046
Ensembl chr 1:226,824,534...226,902,315 		JBrowse link
G Rexo1 RNA exonuclease 1 homolog IEA KEGG rno:03008 NCBI chr 7:9,154,050...9,174,035
Ensembl chr 7:9,154,061...9,173,454 		JBrowse link
G Rexo1l1-ps1 REX1, RNA exonuclease 1 homolog-like 1, pseudogene 1 IEA KEGG rno:03008 NCBI chr 2:138,834,049...138,838,838
Ensembl chr 2:138,834,559...138,837,083 		JBrowse link
G Rexo2 RNA exonuclease 2 IEA KEGG rno:03008 NCBI chr 8:48,811,900...48,823,622
Ensembl chr 8:48,811,900...48,823,622 		JBrowse link
G Rexo5 RNA exonuclease 5 IEA KEGG rno:03008 NCBI chr 1:174,168,633...174,264,526
Ensembl chr 1:174,168,694...174,241,486 		JBrowse link
G Riok1 RIO kinase 1 IEA
ISO		 KEGG
RGD		 PMID:24424021 rno:03008, RGD:10002751 NCBI chr17:26,767,440...26,789,900
Ensembl chr17:26,766,947...26,789,900 		JBrowse link
G Riok2 RIO kinase 2 IEA
ISO		 KEGG
RGD		 PMID:24424021 rno:03008, RGD:10002751 NCBI chr 1:58,103,132...58,119,397
Ensembl chr 1:58,103,084...58,120,512 		JBrowse link
G Riok3 RIO kinase 3 ISO RGD PMID:24424021 RGD:10002751 NCBI chr18:3,327,776...3,353,350
Ensembl chr18:3,327,776...3,353,343 		JBrowse link
G Rpl10 ribosomal protein L10 ISO RGD PMID:23636399 RGD:10002762 NCBI chr  X:152,054,562...152,056,769
Ensembl chr  X:152,054,452...152,056,761 		JBrowse link
G Rpl10a ribosomal protein L10A ISO RGD PMID:23636399 RGD:10002762 NCBI chr20:6,388,800...6,391,358
Ensembl chr20:6,385,823...6,391,357 		JBrowse link
G Rpl11 ribosomal protein L11 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599 		JBrowse link
G Rpl12 ribosomal protein L12 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 3:16,264,269...16,266,645
Ensembl chr 3:16,264,251...16,266,642 		JBrowse link
G Rpl13 ribosomal protein L13 ISO RGD PMID:23636399 RGD:10002762 NCBI chr19:51,153,990...51,156,541
Ensembl chr19:51,153,924...51,163,014 		JBrowse link
G Rpl13a ribosomal protein L13A ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:95,609,374...95,612,557
Ensembl chr 1:95,609,370...95,620,463 		JBrowse link
G Rpl14 ribosomal protein L14 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:120,286,035...120,289,160
Ensembl chr 8:120,284,645...120,289,064 		JBrowse link
G Rpl15 ribosomal protein L15 ISO RGD PMID:25346433 PMID:23636399 RGD:9999448, RGD:10002762 NCBI chr15:7,503,883...7,507,166
Ensembl chr15:7,503,883...7,507,165 		JBrowse link
G Rpl17 ribosomal protein L17 ISO RGD PMID:23636399 RGD:10002762 NCBI chr18:68,581,141...68,584,253
Ensembl chr18:68,581,098...68,584,253 		JBrowse link
G Rpl18 ribosomal protein L18 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:96,188,811...96,191,452
Ensembl chr 1:96,188,112...96,191,452 		JBrowse link
G Rpl18a ribosomal protein L18A ISO RGD PMID:23636399 RGD:10002762 NCBI chr16:18,542,555...18,544,578
Ensembl chr16:18,542,566...18,545,546 		JBrowse link
G Rpl19 ribosomal protein L19 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:83,022,503...83,026,030
Ensembl chr10:83,019,257...83,052,112 		JBrowse link
G Rpl21 ribosomal protein L21 ISO RGD PMID:23636399 RGD:10002762 NCBI chr12:8,268,641...8,272,278
Ensembl chr12:8,267,196...8,272,281
Ensembl chr 3:8,267,196...8,272,281
Ensembl chr13:8,267,196...8,272,281 		JBrowse link
G Rpl22 ribosomal protein L22 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:162,835,241...162,843,394
Ensembl chr 5:162,833,740...162,843,368
Ensembl chr 7:162,833,740...162,843,368
Ensembl chr 4:162,833,740...162,843,368 		JBrowse link
G Rpl23 ribosomal protein L23 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:82,771,878...82,775,840
Ensembl chr10:82,771,538...82,775,870 		JBrowse link
G Rpl23a ribosomal protein L23A ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:63,076,660...63,079,346
Ensembl chr10:63,076,066...63,079,346 		JBrowse link
G Rpl24 ribosomal protein L24 ISO RGD PMID:23636399 RGD:10002762 NCBI chr11:44,653,937...44,659,346
Ensembl chr11:44,653,937...44,659,370 		JBrowse link
G Rpl26 ribosomal protein L26 ISO RGD PMID:25346433 PMID:23636399 RGD:9999448, RGD:10002762 NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966 		JBrowse link
G Rpl27 ribosomal protein L27 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:86,375,511...86,379,210
Ensembl chr10:86,375,454...86,379,193 		JBrowse link
G Rpl27a ribosomal protein L27A ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:163,539,732...163,542,771 JBrowse link
G Rpl28 ribosomal protein L28 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:69,052,148...69,054,735
Ensembl chr 1:69,053,203...69,055,032 		JBrowse link
G Rpl29 ribosomal protein L29 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:107,068,929...107,070,963
Ensembl chr 8:107,068,480...107,070,914 		JBrowse link
G Rpl3 ribosomal protein L3 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 7:111,622,255...111,627,640
Ensembl chr 7:111,621,610...111,636,468 		JBrowse link
G Rpl30 ribosomal protein L30 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 7:65,648,266...65,651,401
Ensembl chr 7:65,645,991...65,651,363
Ensembl chr10:65,645,991...65,651,363
Ensembl chr10:65,645,991...65,651,363 		JBrowse link
G Rpl31 ribosomal protein L31 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 9:41,647,397...41,651,441
Ensembl chr 9:41,647,426...41,662,129 		JBrowse link
G Rpl32 ribosomal protein L32 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 4:148,864,048...148,867,612
Ensembl chr 4:148,864,044...148,867,612 		JBrowse link
G Rpl34 ribosomal protein L34 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 2:219,284,373...219,288,108
Ensembl chr 2:219,284,382...219,288,111 		JBrowse link
G Rpl35 ribosomal protein L35 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 3:22,753,255...22,756,217
Ensembl chr 3:22,753,253...22,756,243 		JBrowse link
G Rpl35a ribosomal protein L35A ISO RGD PMID:23636399 RGD:10002762 NCBI chr11:67,726,031...67,729,953
Ensembl chr11:67,726,032...67,729,942
Ensembl chr 5:67,726,032...67,729,942 		JBrowse link
G Rpl36 ribosomal protein L36 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 9:1,441,986...1,447,397
Ensembl chr 6:98,809,534...98,809,897 		JBrowse link
G Rpl36a ribosomal protein L36A ISO RGD PMID:23636399 RGD:10002762 NCBI chr  X:97,766,179...97,768,892
Ensembl chr  X:97,766,179...97,768,892 		JBrowse link
G Rpl37 ribosomal protein L37 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 2:54,215,469...54,217,429
Ensembl chr 2:54,215,469...54,217,442 		JBrowse link
G Rpl37a ribosomal protein L37A ISO RGD PMID:23636399 RGD:10002762 NCBI chr 9:74,298,843...74,300,926 JBrowse link
G Rpl37l1 ribosomal protein L37-like 1 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:61,033,799...61,034,157
Ensembl chr10:61,033,797...61,034,168
Ensembl chr 9:61,033,797...61,034,168 		JBrowse link
G Rpl38 ribosomal protein L38 ISO RGD PMID:23636399 RGD:10002762 NCBI chr10:99,701,330...99,705,004
Ensembl chr10:99,701,362...99,705,004
Ensembl chr14:99,701,362...99,705,004
Ensembl chr 3:99,701,362...99,705,004
Ensembl chr 2:99,701,362...99,705,004
Ensembl chr16:99,701,362...99,705,004 		JBrowse link
G Rpl39 ribosomal protein L39 ISO RGD PMID:23636399 RGD:10002762 NCBI chr  X:116,327,216...116,330,211
Ensembl chr18:6,326,330...6,326,692
Ensembl chr  X:6,326,330...6,326,692 		JBrowse link
G Rpl4 ribosomal protein L4 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:64,671,177...64,676,301
Ensembl chr 8:64,671,160...64,676,306 		JBrowse link
G Rpl5 ribosomal protein L5 ISO RGD PMID:23636399 RGD:10002762 NCBI chr14:1,843,856...1,850,301
Ensembl chr14:1,843,770...1,850,290 		JBrowse link
G Rpl6 ribosomal protein L6 ISO RGD PMID:23636399 RGD:10002762 NCBI chr12:35,347,493...35,352,011
Ensembl chr12:35,347,497...35,351,921 		JBrowse link
G Rpl7 ribosomal protein L7 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 5:3,217,184...3,220,192 JBrowse link
G Rpl7a ribosomal protein L7A ISO RGD PMID:23636399 RGD:10002762 NCBI chr 3:10,239,026...10,241,703
Ensembl chr 3:10,239,001...10,241,716 		JBrowse link
G Rpl8 ribosomal protein L8 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 7:108,626,194...108,628,485
Ensembl chr 7:108,622,324...108,628,482
Ensembl chr 3:108,622,324...108,628,482 		JBrowse link
G Rpl9 ribosomal protein L9 ISO RGD PMID:23636399 RGD:10002762 NCBI chr14:42,893,945...42,897,140
Ensembl chr14:42,893,942...42,897,136
Ensembl chr 3:42,893,942...42,897,136 		JBrowse link
G Rplp0 ribosomal protein lateral stalk subunit P0 ISO RGD PMID:23636399 RGD:10002762 NCBI chr12:41,054,363...41,057,632
Ensembl chr12:41,054,179...41,057,632 		JBrowse link
G Rplp1 ribosomal protein lateral stalk subunit P1 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 8:62,394,008...62,395,341
Ensembl chr 8:62,393,177...62,395,339 		JBrowse link
G Rplp2 ribosomal protein lateral stalk subunit P2 ISO RGD PMID:23636399 RGD:10002762 NCBI chr 1:196,546,086...196,548,636
Ensembl chr 1:196,546,352...196,548,645 		JBrowse link
G Rpp25 ribonuclease P and MRP subunit p25 IEA KEGG rno:03008 NCBI chr 8:57,907,352...57,908,732
Ensembl chr 8:57,907,352...57,908,732 		JBrowse link
G Rpp30 ribonuclease P/MRP subunit p30 IEA KEGG rno:03008 NCBI chr 1:233,786,048...233,808,958
Ensembl chr 1:233,786,099...233,808,952 		JBrowse link
G Rpp38 ribonuclease P/MRP subunit p38 IEA KEGG rno:03008 NCBI chr17:74,914,066...74,917,742
Ensembl chr17:74,908,932...74,927,431 		JBrowse link
G Rpp40 ribonuclease P/MRP subunit p40 IEA KEGG rno:03008 NCBI chr17:28,947,752...28,956,788
Ensembl chr17:28,947,734...28,956,788 		JBrowse link
G Rps10 ribosomal protein S10 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr20:5,694,313...5,698,922
Ensembl chr20:5,694,313...5,699,044
Ensembl chr 6:5,694,313...5,699,044 		JBrowse link
G Rps11 ribosomal protein S11 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:95,605,690...95,607,798
Ensembl chr 1:95,605,692...95,607,874 		JBrowse link
G Rps12 ribosomal protein S12 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:21,680,854...21,683,010
Ensembl chr 1:21,680,852...21,683,014 		JBrowse link
G Rps13 ribosomal protein S13 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:170,572,925...170,575,355
Ensembl chr 1:170,572,921...170,575,355
Ensembl chr 3:170,572,921...170,575,355 		JBrowse link
G Rps14 ribosomal protein S14 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr18:54,227,854...54,232,638
Ensembl chr18:54,227,854...54,233,166 		JBrowse link
G Rps15 ribosomal protein S15 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 7:9,416,003...9,417,442
Ensembl chr 7:9,416,004...9,417,450 		JBrowse link
G Rps15a ribosomal protein S15a ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:172,420,151...172,427,021
Ensembl chr 1:172,419,761...172,426,995 		JBrowse link
G Rps16 ribosomal protein S16 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:83,643,066...83,646,056
Ensembl chr 1:83,643,130...83,646,206 		JBrowse link
G Rps17 ribosomal protein S17 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730 RGD:10002762 NCBI chr 1:135,295,920...135,298,506
Ensembl chr 1:135,295,919...135,298,535
Ensembl chr 8:135,295,919...135,298,535 		JBrowse link
G Rps18 ribosomal protein S18 ISO RGD PMID:25346433 PMID:20819938 PMID:23636399 RGD:9999448, RGD:10002730, RGD:10002762 NCBI chr20:4,931,427...4,935,538
Ensembl chr10:101,204,500...101,205,146
Ensembl chr20:101,204,500...101,205,146 		JBrowse link
G Rps19 ribosomal protein S19 ISO RGD PMID:25346433 PMID:23439679 PMID:20819938 PMID:23636399 RGD:9999448, RGD:9999449, RGD:10002730, RGD:10002762 NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508 		JBrowse link
G Rps2 ribosomal protein S2 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr10:13,747,316...13,749,165
Ensembl chr10:13,747,301...13,749,163 		JBrowse link
G Rps20 ribosomal protein S20 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 5:16,819,095...16,820,476
Ensembl chr 5:16,819,304...16,820,475
Ensembl chr 9:16,819,304...16,820,475
Ensembl chr 3:16,819,304...16,820,475 		JBrowse link
G Rps21 ribosomal protein S21 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 3:167,346,437...167,347,459
Ensembl chr 3:167,346,201...167,347,470 		JBrowse link
G Rps21-ps1 ribosomal protein S21, pseudogene 1 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730 RGD:10002762 NCBI chr 5:153,387,133...153,387,476
Ensembl chr 5:153,387,176...153,387,427 		JBrowse link
G Rps23 ribosomal protein S23 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 2:22,079,339...22,080,909
Ensembl chr 2:22,079,302...22,080,918 		JBrowse link
G Rps24 ribosomal protein S24 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr16:89,538...94,267
Ensembl chr16:89,604...94,279 		JBrowse link
G Rps25 ribosomal protein s25 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 8:44,733,623...44,735,999
Ensembl chr 8:44,733,029...44,737,271 		JBrowse link
G Rps26 ribosomal protein S26 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 7:1,057,332...1,058,882 JBrowse link
G Rps27 ribosomal protein S27 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 2:175,665,858...175,666,963
Ensembl chr 2:175,665,853...175,666,964 		JBrowse link
G Rps27a ribosomal protein S27a ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr14:103,285,734...103,288,011
Ensembl chr14:103,285,734...103,288,011
Ensembl chr 5:103,285,734...103,288,011 		JBrowse link
G Rps27l ribosomal protein S27-like ISO RGD PMID:20819938 RGD:10002730 NCBI chr 8:67,562,483...67,567,418
Ensembl chr 8:67,562,483...67,567,418 		JBrowse link
G Rps28 ribosomal protein S28 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 7:14,607,801...14,609,170
Ensembl chr 7:14,607,801...14,609,170
Ensembl chr16:14,607,801...14,609,170 		JBrowse link
G Rps29 ribosomal protein S29 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 6:87,635,229...87,636,627
Ensembl chr 6:87,635,230...87,636,636 		JBrowse link
G Rps3 ribosomal protein S3 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:153,778,363...153,783,663
Ensembl chr 1:153,777,472...153,783,680 		JBrowse link
G Rps3a ribosomal protein S3a ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 2:171,524,685...171,529,054
Ensembl chr 2:171,524,500...171,529,055 		JBrowse link
G Rps4x ribosomal protein S4, X-linked ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr  X:67,298,522...67,302,965
Ensembl chr  X:67,298,525...67,303,019
Ensembl chr 4:67,298,525...67,303,019 		JBrowse link
G Rps4x-ps13 ribosomal protein S4, X-linked, pseudogene 13 ISO RGD PMID:20819938 RGD:10002730 NCBI chr 4:181,269,507...181,270,440
Ensembl chr 4:181,269,081...181,270,349 		JBrowse link
G Rps5 ribosomal protein S5 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 1:73,538,776...73,543,073
Ensembl chr 1:73,538,776...73,543,073 		JBrowse link
G Rps6 ribosomal protein S6 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730 RGD:10002762 NCBI chr 5:101,371,716...101,374,576
Ensembl chr 5:101,371,136...101,374,602
Ensembl chr 5:101,371,136...101,374,602 		JBrowse link
G Rps7 ribosomal protein S7 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 6:45,266,200...45,271,064
Ensembl chr 6:45,223,980...45,271,145 		JBrowse link
G Rps8 ribosomal protein S8 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 5:130,630,362...130,632,932
Ensembl chr 5:130,629,716...130,633,268 		JBrowse link
G Rps9 ribosomal protein S9 ISO RGD PMID:20819938 PMID:23636399 RGD:10002730 RGD:10002762 NCBI chr 1:65,511,723...65,515,076
Ensembl chr 1:65,511,723...65,515,123 		JBrowse link
G Rpsa ribosomal protein SA ISO RGD PMID:20819938 PMID:23636399 RGD:10002730, RGD:10002762 NCBI chr 8:119,851,225...119,855,103
Ensembl chr 8:119,851,225...119,855,247 		JBrowse link
G Rrp12 ribosomal RNA processing 12 ISO RGD PMID:24424021 RGD:10002751 NCBI chr 1:240,672,378...240,705,992
Ensembl chr 1:240,672,382...240,706,018 		JBrowse link
G Rrp7a ribosomal RNA processing 7 homolog A IEA KEGG rno:03008 NCBI chr 7:114,262,929...114,272,817
Ensembl chr 7:114,256,472...114,272,817 		JBrowse link
G Sbds Sbds, ribosome maturation factor IEA KEGG rno:03008 NCBI chr12:26,420,410...26,429,650
Ensembl chr12:26,420,414...26,429,649 		JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 IEA
ISO		 KEGG
RGD		 PMID:22065625 rno:03008, RGD:9999451 NCBI chr 7:113,565,293...113,570,887
Ensembl chr 7:113,565,295...113,570,872
Ensembl chr 1:113,565,295...113,570,872 		JBrowse link
G Snu13l1 small nuclear ribonucleoprotein 13 like 1 IEA KEGG rno:03008 NCBI chr  X:150,624,087...150,624,525
Ensembl chr  X:150,624,087...150,624,473 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 IEA KEGG rno:03008 NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769 		JBrowse link
G Tbl3 transducin (beta)-like 3 IEA KEGG rno:03008 NCBI chr10:13,726,127...13,731,340
Ensembl chr10:13,726,129...13,731,372 		JBrowse link
G Tcof1 treacle ribosome biogenesis factor 1 IEA KEGG rno:03008 NCBI chr18:54,267,015...54,300,324
Ensembl chr18:54,267,026...54,300,324 		JBrowse link
G Uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 ISO RGD PMID:23636399 RGD:10002762 NCBI chr16:18,918,614...18,920,807
Ensembl chr16:18,900,616...18,920,807 		JBrowse link
G Utp14a UTP14A small subunit processome component IEA KEGG rno:03008 NCBI chr  X:127,439,282...127,464,634
Ensembl chr  X:127,439,268...127,464,633 		JBrowse link
G Utp15 UTP15, small subunit processome component IEA KEGG rno:03008 NCBI chr 2:29,594,405...29,612,819
Ensembl chr 2:29,594,941...29,612,773 		JBrowse link
G Utp18 UTP18 small subunit processome component IEA KEGG rno:03008 NCBI chr10:78,811,879...78,839,338
Ensembl chr10:78,811,880...78,839,627 		JBrowse link
G Utp23 UTP23, small subunit processome component ISO RGD PMID:24550520 RGD:9999445 NCBI chr 7:83,185,187...83,196,652
Ensembl chr 7:83,189,656...83,196,655 		JBrowse link
G Utp4 UTP4 small subunit processome component IEA KEGG rno:03008 NCBI chr19:34,790,962...34,820,558
Ensembl chr19:34,792,457...34,820,550 		JBrowse link
G Utp6 UTP6 small subunit processome component IEA KEGG rno:03008 NCBI chr10:64,897,321...64,927,997
Ensembl chr10:64,897,328...64,927,997 		JBrowse link
G Wdr3 WD repeat domain 3 IEA
ISO		 KEGG
RGD		 PMID:24550520 rno:03008, RGD:9999445 NCBI chr 2:187,505,816...187,528,432
Ensembl chr 2:187,505,816...187,528,432 		JBrowse link
G Wdr43 WD repeat domain 43 IEA KEGG rno:03008 NCBI chr 6:23,845,499...23,884,846
Ensembl chr 6:23,845,499...23,884,846 		JBrowse link
G Wdr75 WD repeat domain 75 IEA KEGG rno:03008 NCBI chr 9:47,903,214...47,933,399
Ensembl chr 9:47,903,200...47,933,399 		JBrowse link
G Xpo1 exportin 1 IEA
ISO		 KEGG
RGD		 PMID:17509569 PMID:25802992 rno:03008, RGD:10002749, RGD:10002750 NCBI chr14:97,233,282...97,275,536
Ensembl chr14:97,233,270...97,275,498 		JBrowse link
G Xpo5 exportin 5 ISO RGD PMID:25802992 RGD:10002750 NCBI chr 9:14,740,182...14,778,171
Ensembl chr 9:14,740,182...14,778,171 		JBrowse link
G Xrn1 5'-3' exoribonuclease 1 IEA KEGG rno:03008 NCBI chr 8:96,527,871...96,637,385
Ensembl chr 8:96,528,195...96,632,739 		JBrowse link
G Xrn2 5'-3' exoribonuclease 2 IEA
ISO		 KEGG
RGD		 PMID:24550520 rno:03008, RGD:9999445 NCBI chr 3:134,436,916...134,509,308
Ensembl chr 3:134,437,109...134,509,306 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6092
    regulatory pathway 3867
      pathway pertinent to DNA replication and repair, cell cycle, maintenance of genomic integrity, RNA and protein biosynthesis 1738
        translation pathway 264
          ribosome biogenesis pathway 185
            altered ribosome biogenesis pathway 0
paths to the root