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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:primary immunodeficiency pathway
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Accession:PW:0001027 term browser browse the term
Definition:Primary immunodeficiency groups disorders that result from the immune system malfunctioning that affect both cell-mediated and humoral immunity pathways.
Synonyms:exact_synonym: primary immunodeficiency disease pathway
 related_synonym: KEGG:05340


show annotations for term's descendants           Sort by:
primary immunodeficiency pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase IEA KEGG rno:05340 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:172,818,176...172,842,293 		JBrowse link
G Aicda activation-induced cytidine deaminase IEA KEGG rno:05340 NCBI chr 4:157,446,120...157,455,958
Ensembl chr 4:157,444,697...157,456,356 		JBrowse link
G Aire autoimmune regulator IEA KEGG rno:05340 NCBI chr20:10,635,775...10,650,709
Ensembl chr20:10,635,775...10,650,709 		JBrowse link
G Blnk B-cell linker IEA KEGG rno:05340 NCBI chr 1:239,753,640...239,821,113
Ensembl chr 1:249,703,072...249,770,533 		JBrowse link
G Btk Bruton tyrosine kinase IEA KEGG rno:05340 NCBI chr  X:102,016,070...102,055,448
Ensembl chr  X:102,016,074...102,055,143 		JBrowse link
G Cd19 CD19 molecule IEA KEGG rno:05340 NCBI chr 1:180,987,286...180,993,920
Ensembl chr 1:190,417,853...190,424,355 		JBrowse link
G Cd3d CD3 delta subunit of T-cell receptor complex IEA KEGG rno:05340 NCBI chr 8:45,287,803...45,293,342
Ensembl chr 8:54,175,155...54,196,722 		JBrowse link
G Cd3e CD3 epsilon subunit of T-cell receptor complex IEA KEGG rno:05340 NCBI chr 8:54,200,617...54,211,770
Ensembl chr 8:54,200,617...54,211,876 		JBrowse link
G Cd4 Cd4 molecule IEA KEGG rno:05340 NCBI chr 4:159,355,147...159,381,636
Ensembl chr 4:159,356,337...159,381,461 		JBrowse link
G Cd40 CD40 molecule IEA KEGG rno:05340 NCBI chr 3:174,209,113...174,224,592
Ensembl chr 3:174,209,719...174,224,847 		JBrowse link
G Cd40lg CD40 ligand IEA KEGG rno:05340 NCBI chr  X:140,164,341...140,176,057
Ensembl chr  X:140,164,302...140,176,475 		JBrowse link
G Cd79a CD79a molecule IEA KEGG rno:05340 NCBI chr 1:89,621,460...89,625,813
Ensembl chr 1:89,621,460...89,625,812 		JBrowse link
G Cd8a CD8 subunit alpha IEA KEGG rno:05340 NCBI chr 4:103,365,804...103,370,041
Ensembl chr 4:104,900,833...104,928,358 		JBrowse link
G Cd8b CD8 subunit beta IEA KEGG rno:05340 NCBI chr 4:103,312,596...103,328,523
Ensembl chr 4:104,870,893...104,886,868 		JBrowse link
G Ciita class II, major histocompatibility complex, transactivator IEA KEGG rno:05340 NCBI chr10:5,139,947...5,187,493
Ensembl chr10:5,647,085...5,694,342 		JBrowse link
G Dclre1c DNA cross-link repair 1C IEA KEGG rno:05340 NCBI chr17:79,684,988...79,718,399
Ensembl chr17:79,678,698...79,718,734 		JBrowse link
G Icos inducible T-cell co-stimulator IEA KEGG rno:05340 NCBI chr 9:62,368,075...62,406,900
Ensembl chr 9:69,877,785...69,900,960 		JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma IEA KEGG rno:05340 NCBI chr  X:152,216,485...152,241,476
Ensembl chr  X:157,367,639...157,392,757 		JBrowse link
G Il2rg interleukin 2 receptor subunit gamma IEA KEGG rno:05340 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:70,435,343...70,439,161 		JBrowse link
G Il7r interleukin 7 receptor IEA KEGG rno:05340 NCBI chr 2:60,179,561...60,204,937
Ensembl chr 2:60,181,382...60,211,027 		JBrowse link
G Jak3 Janus kinase 3 IEA KEGG rno:05340 NCBI chr16:18,418,807...18,432,515
Ensembl chr16:18,420,415...18,433,222 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase IEA KEGG rno:05340 NCBI chr 5:141,888,318...141,916,945
Ensembl chr 5:147,172,642...147,201,267 		JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C IEA KEGG rno:05340 NCBI chr13:52,147,717...52,259,810
Ensembl chr13:52,147,717...52,259,746 		JBrowse link
G Rag1 recombination activating 1 IEA KEGG rno:05340 NCBI chr 3:108,372,087...108,383,184
Ensembl chr 3:108,371,978...108,383,261 		JBrowse link
G Rag2 recombination activating 2 IEA KEGG rno:05340 NCBI chr 3:108,357,399...108,367,186
Ensembl chr 3:108,357,399...108,365,253 		JBrowse link
G Rfx5 regulatory factor X5 IEA KEGG rno:05340 NCBI chr 2:185,210,206...185,217,735
Ensembl chr 2:185,210,217...185,217,743 		JBrowse link
G Rfxank regulatory factor X-associated ankyrin-containing protein IEA KEGG rno:05340 NCBI chr16:19,280,857...19,288,886
Ensembl chr16:19,314,759...19,325,248 		JBrowse link
G Rfxap regulatory factor X-associated protein IEA KEGG rno:05340 NCBI chr 2:139,008,052...139,012,235
Ensembl chr 2:141,158,215...141,162,397 		JBrowse link
G Tap1 transporter 1, ATP binding cassette subfamily B member IEA KEGG rno:05340 NCBI chr20:4,658,171...4,668,543
Ensembl chr20:4,658,172...4,668,810 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member IEA KEGG rno:05340 NCBI chr20:4,638,257...4,652,296
Ensembl chr20:4,638,257...4,651,537 		JBrowse link
G Tnfrsf13b TNF receptor superfamily member 13B IEA KEGG rno:05340 NCBI chr10:46,301,336...46,322,460
Ensembl chr10:46,301,316...46,324,408 		JBrowse link
G Tnfrsf13c TNF receptor superfamily member 13C IEA KEGG rno:05340 NCBI chr 7:113,736,046...113,738,523
Ensembl chr 7:115,616,303...115,618,620 		JBrowse link
G Ung uracil-DNA glycosylase IEA KEGG rno:05340 NCBI chr12:42,485,276...42,494,217
Ensembl chr12:48,145,838...48,155,257 		JBrowse link
G Zap70 zeta chain of T cell receptor associated protein kinase 70 IEA KEGG rno:05340 NCBI chr 9:46,485,605...46,507,552
Ensembl chr 9:46,485,598...46,509,062 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6091
    disease pathway 1954
      immune system disease pathway 293
        primary immunodeficiency pathway 34
paths to the root