PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: Toll-like receptor signaling pathway
Accession: PW:0000814
browse the term
Definition: Toll-like receptors represent a large and the better understood family of pattern recognition receptors that sense an array of exogenous structures, and recent evidence shows they can also recognize defective endogenous molecules. The intracellular signaling cascades they set in motion lead to the expression of inflammatory mediators.
Synonyms: related_synonym: TLR signaling pathway; Toll-Like Receptors Cascades
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Akt1
thymoma viral proto-oncogene 1
IEA
KEGG
mmu:04620
NCBI chr12:112,620,260...112,641,266
Ensembl chr12:112,620,255...112,641,318
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Akt2
thymoma viral proto-oncogene 2
IEA
KEGG
mmu:04620
NCBI chr 7:27,290,977...27,340,251
Ensembl chr 7:27,290,977...27,340,251
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Akt3
thymoma viral proto-oncogene 3
IEA
KEGG
mmu:04620
NCBI chr 1:176,847,642...177,091,688
Ensembl chr 1:176,847,639...177,085,769
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Casp8
caspase 8
IEA
KEGG
mmu:04620
NCBI chr 1:58,834,553...58,886,663
Ensembl chr 1:58,834,533...58,886,662
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Ccl3
C-C motif chemokine ligand 3
IEA
KEGG
mmu:04620
NCBI chr11:83,538,669...83,540,204
Ensembl chr11:83,538,670...83,540,181
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Ccl4
C-C motif chemokine ligand 4
IEA
KEGG
mmu:04620
NCBI chr11:83,553,410...83,555,509
Ensembl chr11:83,553,410...83,555,509
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Ccl5
C-C motif chemokine ligand 5
IEA
KEGG
mmu:04620
NCBI chr11:83,416,604...83,421,344
Ensembl chr11:83,416,604...83,421,344
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Cd14
CD14 antigen
IEA ISO
KEGG RGD
PMID:22119168
mmu:04620, RGD:7247704
NCBI chr18:36,858,117...36,859,868
Ensembl chr18:36,858,120...36,859,851
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Cd40
CD40 antigen
IEA
KEGG
mmu:04620
NCBI chr 2:164,897,535...164,913,574
Ensembl chr 2:164,897,547...164,914,868
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Cd80
CD80 antigen
IEA
KEGG
mmu:04620
NCBI chr16:38,277,793...38,316,682
Ensembl chr16:38,275,923...38,316,697
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Cd86
CD86 antigen
IEA
KEGG
mmu:04620
NCBI chr16:36,389,318...36,486,439
Ensembl chr16:36,424,231...36,486,443
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Chuk
conserved helix-loop-helix ubiquitous kinase
IEA
KEGG
mmu:04620
NCBI chr19:44,061,773...44,095,940
Ensembl chr19:44,061,774...44,095,919
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Ctsk
cathepsin K
IEA
KEGG
mmu:04620
NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
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Cxcl10
C-X-C motif chemokine ligand 10
IEA
KEGG
mmu:04620
NCBI chr 5:92,494,497...92,496,748
Ensembl chr 5:92,494,497...92,496,748
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Cxcl11
chemokine (C-X-C motif) ligand 11
IEA
KEGG
mmu:04620
NCBI chr 5:92,507,403...92,511,155
Ensembl chr 5:92,507,403...92,513,344
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Cxcl9
C-X-C motif chemokine ligand 9
IEA
KEGG
mmu:04620
NCBI chr 5:92,469,190...92,475,938
Ensembl chr 5:92,469,206...92,475,938
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Fadd
Fas associated via death domain
IEA
KEGG
mmu:04620
NCBI chr 7:144,132,060...144,136,178
Ensembl chr 7:144,131,055...144,136,200
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Fos
FBJ osteosarcoma oncogene
IEA
KEGG
mmu:04620
NCBI chr12:85,520,664...85,524,048
Ensembl chr12:85,520,664...85,524,047
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Ifna1
interferon alpha 1
IEA
KEGG
mmu:04620
NCBI chr 4:88,768,324...88,768,893
Ensembl chr 4:88,768,324...88,768,893
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Ifna11
interferon alpha 11
IEA
KEGG
mmu:04620
NCBI chr 4:88,738,156...88,738,802
Ensembl chr 4:88,738,196...88,738,768
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Ifna12
interferon alpha 12
IEA
KEGG
mmu:04620
NCBI chr 4:88,520,817...88,521,613
Ensembl chr 4:88,520,817...88,521,613
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Ifna13
interferon alpha 13
IEA
KEGG
mmu:04620
NCBI chr 4:88,561,878...88,562,696
Ensembl chr 4:88,561,878...88,562,696
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Ifna14
interferon alpha 14
IEA
KEGG
mmu:04620
NCBI chr 4:88,489,466...88,490,035
Ensembl chr 4:88,489,466...88,490,035
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Ifna15
interferon alpha 15
IEA
KEGG
mmu:04620
NCBI chr 4:88,475,910...88,476,482
Ensembl chr 4:88,475,910...88,476,482
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Ifna2
interferon alpha 2
IEA
KEGG
mmu:04620
NCBI chr 4:88,601,444...88,602,016
Ensembl chr 4:88,601,118...88,602,149
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Ifna4
interferon alpha 4
IEA
KEGG
mmu:04620
NCBI chr 4:88,760,032...88,761,009
Ensembl chr 4:88,760,098...88,760,658
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Ifna5
interferon alpha 5
IEA
KEGG
mmu:04620
NCBI chr 4:88,753,762...88,754,331
Ensembl chr 4:88,753,762...88,754,331
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Ifna6
interferon alpha 6
IEA
KEGG
mmu:04620
NCBI chr 4:88,745,627...88,746,269
Ensembl chr 4:88,745,653...88,746,222
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Ifna7
interferon alpha 7
IEA
KEGG
mmu:04620
NCBI chr 4:88,734,462...88,735,037
Ensembl chr 4:88,734,465...88,735,037
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Ifna9
interferon alpha 9
IEA
KEGG
mmu:04620
NCBI chr 4:88,510,050...88,510,622
Ensembl chr 4:88,510,050...88,510,622
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Ifnab
interferon alpha B
IEA
KEGG
mmu:04620
NCBI chr 4:88,608,836...88,609,505
Ensembl chr 4:88,608,539...88,609,596
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Ifnar1
interferon (alpha and beta) receptor 1
IEA
KEGG
mmu:04620
NCBI chr16:91,281,016...91,307,411
Ensembl chr16:91,282,126...91,304,329
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Ifnar2
interferon (alpha and beta) receptor 2
IEA
KEGG
mmu:04620
NCBI chr16:91,166,517...91,202,477
Ensembl chr16:91,169,671...91,202,477
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Ifnb1
interferon beta 1, fibroblast
IEA
KEGG
mmu:04620
NCBI chr 4:88,440,253...88,441,083
Ensembl chr 4:88,440,262...88,441,011
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Ikbkb
inhibitor of kappaB kinase beta
IEA
KEGG
mmu:04620
NCBI chr 8:23,149,228...23,196,605
Ensembl chr 8:23,149,228...23,196,605
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Ikbke
inhibitor of kappaB kinase epsilon
IEA
KEGG
mmu:04620
NCBI chr 1:131,182,337...131,207,339
Ensembl chr 1:131,182,080...131,207,344
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Ikbkg
inhibitor of kappaB kinase gamma
IEA
KEGG
mmu:04620
NCBI chr X:73,436,883...73,498,013
Ensembl chr X:73,436,896...73,497,460
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Il12a
interleukin 12a
IEA
KEGG
mmu:04620
NCBI chr 3:68,597,977...68,605,881
Ensembl chr 3:68,597,977...68,605,880
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Il12b
interleukin 12b
IEA
KEGG
mmu:04620
NCBI chr11:44,290,890...44,305,504
Ensembl chr11:44,290,890...44,304,860
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Il1b
interleukin 1 beta
IEA
KEGG
mmu:04620
NCBI chr 2:129,206,490...129,213,059
Ensembl chr 2:129,206,490...129,213,059
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Il6
interleukin 6
IEA
KEGG
mmu:04620
NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979
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Irak1
interleukin-1 receptor-associated kinase 1
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr X:73,057,520...73,067,527
Ensembl chr X:73,057,520...73,067,524
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Irak2
interleukin-1 receptor-associated kinase 2
ISO
RGD
PMID:21235323
RGD:5685014
NCBI chr 6:113,615,428...113,671,987
Ensembl chr 6:113,615,428...113,671,987
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Irak3
interleukin-1 receptor-associated kinase 3
IMP
RGD
PMID:28954388
RGD:34888230
NCBI chr10:119,977,553...120,038,035
Ensembl chr10:119,977,553...120,038,035
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Irak4
interleukin-1 receptor-associated kinase 4
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr15:94,441,495...94,466,198
Ensembl chr15:94,441,524...94,479,696
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Irf3
interferon regulatory factor 3
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr 7:44,647,072...44,652,272
Ensembl chr 7:44,647,072...44,652,272
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Irf5
interferon regulatory factor 5
IEA
KEGG
mmu:04620
NCBI chr 6:29,526,129...29,541,874
Ensembl chr 6:29,526,624...29,541,870
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Irf7
interferon regulatory factor 7
IEA
KEGG
mmu:04620
NCBI chr 7:140,843,096...140,846,412
Ensembl chr 7:140,842,619...140,846,394
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Jun
jun proto-oncogene
IEA
KEGG
mmu:04620
NCBI chr 4:94,937,273...94,940,459
Ensembl chr 4:94,937,271...94,940,459
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Lbp
lipopolysaccharide binding protein
IEA ISO
KEGG RGD
PMID:22119168
mmu:04620, RGD:7247704
NCBI chr 2:158,148,413...158,174,772
Ensembl chr 2:158,148,413...158,174,772
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Ly96
lymphocyte antigen 96
ISO IEA
KEGG RGD
PMID:21741580 PMID:22119168
mmu:04620, RGD:5685019 , RGD:7247704
NCBI chr 1:16,758,680...16,779,829
Ensembl chr 1:16,758,275...16,779,835
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Map2k1
mitogen-activated protein kinase kinase 1
IEA
KEGG
mmu:04620
NCBI chr 9:64,093,066...64,160,887
Ensembl chr 9:64,093,052...64,160,913
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Map2k2
mitogen-activated protein kinase kinase 2
IEA
KEGG
mmu:04620
NCBI chr10:80,941,749...80,960,531
Ensembl chr10:80,941,749...80,969,809
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Map2k3
mitogen-activated protein kinase kinase 3
IEA
KEGG
mmu:04620
NCBI chr11:60,822,880...60,843,637
Ensembl chr11:60,822,859...60,843,637
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Map2k4
mitogen-activated protein kinase kinase 4
IEA
KEGG
mmu:04620
NCBI chr11:65,579,070...65,679,185
Ensembl chr11:65,579,069...65,679,123
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Map2k6
mitogen-activated protein kinase kinase 6
IEA
KEGG
mmu:04620
NCBI chr11:110,289,928...110,416,348
Ensembl chr11:110,289,948...110,416,348
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Map2k7
mitogen-activated protein kinase kinase 7
IEA
KEGG
mmu:04620
NCBI chr 8:4,288,740...4,297,897
Ensembl chr 8:4,288,740...4,297,897 Ensembl chr 8:4,288,740...4,297,897
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Map3k7
mitogen-activated protein kinase kinase kinase 7
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr 4:31,963,659...32,023,470
Ensembl chr 4:31,964,097...32,023,467
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Map3k8
mitogen-activated protein kinase kinase kinase 8
IEA
KEGG
mmu:04620
NCBI chr18:4,331,325...4,352,978
Ensembl chr18:4,331,327...4,353,015
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Mapk1
mitogen-activated protein kinase 1
IEA
KEGG
mmu:04620
NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317
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Mapk10
mitogen-activated protein kinase 10
IEA
KEGG
mmu:04620
NCBI chr 5:103,056,413...103,359,200
Ensembl chr 5:103,055,814...103,359,200
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Mapk11
mitogen-activated protein kinase 11
IEA
KEGG
mmu:04620
NCBI chr15:89,026,685...89,033,809
Ensembl chr15:89,026,689...89,033,831
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Mapk12
mitogen-activated protein kinase 12
IEA
KEGG
mmu:04620
NCBI chr15:89,014,787...89,025,270
Ensembl chr15:89,014,787...89,024,906
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Mapk13
mitogen-activated protein kinase 13
IEA
KEGG
mmu:04620
NCBI chr17:28,988,260...28,997,678
Ensembl chr17:28,988,271...28,999,207
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Mapk14
mitogen-activated protein kinase 14
IEA
KEGG
mmu:04620
NCBI chr17:28,910,316...28,967,379
Ensembl chr17:28,910,303...28,967,380
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Mapk3
mitogen-activated protein kinase 3
IEA
KEGG
mmu:04620
NCBI chr 7:126,358,798...126,364,988
Ensembl chr 7:126,358,773...126,364,991
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Mapk8
mitogen-activated protein kinase 8
IEA
KEGG
mmu:04620
NCBI chr14:33,099,855...33,169,213
Ensembl chr14:33,099,855...33,169,115
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Mapk9
mitogen-activated protein kinase 9
IEA
KEGG
mmu:04620
NCBI chr11:49,737,558...49,777,248
Ensembl chr11:49,737,578...49,777,248
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Myd88
myeloid differentiation primary response gene 88
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr 9:119,165,000...119,169,084
Ensembl chr 9:119,165,000...119,170,477
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Nfkb1
nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105
IEA
KEGG
mmu:04620
NCBI chr 3:135,290,416...135,397,422
Ensembl chr 3:135,290,416...135,397,308
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Nfkbia
nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha
IEA
KEGG
mmu:04620
NCBI chr12:55,536,194...55,539,432
Ensembl chr12:55,536,195...55,539,432
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Pik3ca
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
IEA
KEGG
mmu:04620
NCBI chr 3:32,451,203...32,520,256
Ensembl chr 3:32,451,820...32,522,635
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Pik3cb
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta
IEA
KEGG
mmu:04620
NCBI chr 9:98,920,455...99,022,264
Ensembl chr 9:98,918,707...99,022,674
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Pik3cd
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta
IEA
KEGG
mmu:04620
NCBI chr 4:149,733,625...149,787,023
Ensembl chr 4:149,733,625...149,787,028
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Pik3cg
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma
IEA
KEGG
mmu:04620
NCBI chr12:32,223,128...32,258,675
Ensembl chr12:32,223,472...32,258,658
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Pik3r1
phosphoinositide-3-kinase regulatory subunit 1
IEA
KEGG
mmu:04620
NCBI chr13:101,817,269...101,904,725
Ensembl chr13:101,817,071...101,904,725
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Pik3r2
phosphoinositide-3-kinase regulatory subunit 2
IEA
KEGG
mmu:04620
NCBI chr 8:71,220,820...71,229,356
Ensembl chr 8:71,220,820...71,229,357
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Pik3r3
phosphoinositide-3-kinase regulatory subunit 3
IEA
KEGG
mmu:04620
NCBI chr 4:116,078,593...116,160,253
Ensembl chr 4:116,078,815...116,160,253 Ensembl chr 4:116,078,815...116,160,253
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Pik3r5
phosphoinositide-3-kinase regulatory subunit 5
IEA
KEGG
mmu:04620
NCBI chr11:68,322,951...68,388,675
Ensembl chr11:68,322,947...68,388,675
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Rac1
Rac family small GTPase 1
IEA
KEGG
mmu:04620
NCBI chr 5:143,491,236...143,513,786
Ensembl chr 5:143,489,389...143,513,791
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Rela
v-rel reticuloendotheliosis viral oncogene homolog A (avian)
IEA
KEGG
mmu:04620
NCBI chr19:5,686,993...5,698,162
Ensembl chr19:5,687,511...5,698,158
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Ripk1
receptor (TNFRSF)-interacting serine-threonine kinase 1
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr13:34,181,072...34,219,153
Ensembl chr13:34,186,346...34,221,130
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Spp1
secreted phosphoprotein 1
IEA
KEGG
mmu:04620
NCBI chr 5:104,582,977...104,588,919
Ensembl chr 5:104,582,984...104,588,916
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Stat1
signal transducer and activator of transcription 1
IEA
KEGG
mmu:04620
NCBI chr 1:52,158,588...52,201,024
Ensembl chr 1:52,158,599...52,201,024
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Tab1
TGF-beta activated kinase 1/MAP3K7 binding protein 1
ISO IEA
KEGG RGD
PMID:20940366
mmu:04620, RGD:5685016
NCBI chr15:80,017,333...80,045,908
Ensembl chr15:80,017,328...80,045,908
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Tab2
TGF-beta activated kinase 1/MAP3K7 binding protein 2
ISO IEA
KEGG RGD
PMID:20940366
mmu:04620, RGD:5685016
NCBI chr10:7,781,412...7,832,039
Ensembl chr10:7,781,417...7,831,994
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Tab3
TGF-beta activated kinase 1/MAP3K7 binding protein 3
ISO
RGD
PMID:20940366
RGD:5685016
NCBI chr X:84,617,466...84,678,075
Ensembl chr X:84,617,628...84,678,075
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Tbk1
TANK-binding kinase 1
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr10:121,382,360...121,422,699
Ensembl chr10:121,382,360...121,422,692
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Ticam1
TIR domain containing adaptor molecule 1
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr17:56,576,462...56,583,767
Ensembl chr17:56,576,319...56,583,786
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Ticam2
TIR domain containing adaptor molecule 2
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr18:46,691,298...46,707,600
Ensembl chr18:46,690,358...46,707,600
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Tirap
toll-interleukin 1 receptor (TIR) domain-containing adaptor protein
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr 9:35,095,687...35,111,587
Ensembl chr 9:35,095,847...35,111,587
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Tlr1
toll-like receptor 1
ISO IEA
KEGG RGD
PMID:16973131 PMID:21235323
mmu:04620, RGD:1643119 , RGD:5685014
NCBI chr 5:65,082,023...65,090,945
Ensembl chr 5:65,082,022...65,090,906
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Tlr2
toll-like receptor 2
ISO IEA
KEGG RGD
PMID:16973131 PMID:18353287 PMID:21235323
mmu:04620, RGD:1643119 , RGD:5684896 , RGD:5685014
NCBI chr 3:83,743,579...83,749,045
Ensembl chr 3:83,743,579...83,749,074
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Tlr3
toll-like receptor 3
ISO IEA
KEGG RGD
PMID:16973131 PMID:21235323
mmu:04620, RGD:1643119 , RGD:5685014
NCBI chr 8:45,848,702...45,864,112
Ensembl chr 8:45,848,702...45,864,117
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Tlr4
toll-like receptor 4
ISO IEA
KEGG RGD
PMID:16973131 PMID:21235323 PMID:22119168
mmu:04620, RGD:1643119 , RGD:5685014 , RGD:7247704
NCBI chr 4:66,745,788...66,765,338
Ensembl chr 4:66,745,821...66,848,521
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Tlr5
toll-like receptor 5
ISO IEA
KEGG RGD
PMID:16973131 PMID:21235323
mmu:04620, RGD:1643119 , RGD:5685014
NCBI chr 1:182,782,317...182,804,010
Ensembl chr 1:182,782,353...182,804,010
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Tlr6
toll-like receptor 6
ISO IEA
KEGG RGD
PMID:16973131 PMID:18353287 PMID:21235323
mmu:04620, RGD:1643119 , RGD:5684896 , RGD:5685014
NCBI chr 5:65,109,373...65,128,387
Ensembl chr 5:65,109,374...65,117,440
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Tlr7
toll-like receptor 7
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr X:166,086,376...166,113,570
Ensembl chr X:166,087,925...166,113,554
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Tlr8
toll-like receptor 8
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr X:166,024,119...166,047,325
Ensembl chr X:166,025,692...166,047,325
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Tlr9
toll-like receptor 9
ISO IEA
KEGG RGD
PMID:16973131 PMID:21235323
mmu:04620, RGD:1643119 , RGD:5685014
NCBI chr 9:106,099,797...106,104,075
Ensembl chr 9:106,099,797...106,104,082
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Tnf
tumor necrosis factor
IEA
KEGG
mmu:04620
NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
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Tollip
toll interacting protein
IEA
KEGG
mmu:04620
NCBI chr 7:141,435,317...141,456,198
Ensembl chr 7:141,428,550...141,472,244
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Tradd
TNFRSF1A-associated via death domain
ISO
RGD
PMID:21235323
RGD:5685014
NCBI chr 8:105,985,207...105,991,226
Ensembl chr 8:105,984,918...105,991,241
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Traf3
TNF receptor-associated factor 3
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr12:111,132,799...111,233,589
Ensembl chr12:111,132,804...111,233,587
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Traf6
TNF receptor-associated factor 6
ISO IEA
KEGG RGD
PMID:21235323
mmu:04620, RGD:5685014
NCBI chr 2:101,508,765...101,532,013
Ensembl chr 2:101,508,774...101,532,014
G
Ube2n
ubiquitin-conjugating enzyme E2N
ISO
RGD
PMID:21235323
RGD:5685014
NCBI chr10:95,351,024...95,381,520
Ensembl chr10:95,351,007...95,381,519
G
Ube2v1
ubiquitin-conjugating enzyme E2 variant 1
ISO
RGD
PMID:21235323
RGD:5685014
NCBI chr 2:167,449,559...167,473,933
Ensembl chr 2:167,449,558...167,474,015
G
Unc93b1
unc-93 homolog B1, TLR signaling regulator
ISO
RGD
PMID:21235323
RGD:5685014
NCBI chr19:3,985,222...3,999,340
Ensembl chr19:3,985,186...3,999,340
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all