PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: microRNA pathway
Accession: PW:0000808
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Definition: MicroRNAs (miRNAs) are a large family of small RNAs involved in the post-transcriptional regulation of gene expression. The biogenesis and function of miRNA is subject to complex control. Deregulation of miRNA expression has been linked to many diseases including cancer.
Synonyms: related_synonym: MicroRNA (miRNA) biogenesis; miRNA pathway; production of miRNAs involved in gene silencing by miRNA
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Adar
adenosine deaminase, RNA-specific
ISO
RGD
PMID:22001383
RGD:9850105
NCBI chr 2:175,138,391...175,178,280
Ensembl chr 2:175,138,403...175,178,282
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Adarb1
adenosine deaminase, RNA-specific, B1
ISO
RGD
PMID:22001383
RGD:9850105
NCBI chr20:11,222,569...11,350,854
Ensembl chr20:11,222,583...11,350,852
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Ago1
argonaute RISC component 1
ISO
RGD
PMID:20484662
RGD:4144862
NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
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Ago2
argonaute RISC catalytic component 2
ISO
RGD
PMID:20484662
RGD:4144862
NCBI chr 7:105,018,202...105,105,118
Ensembl chr 7:105,029,120...105,104,974
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Ago3
argonaute RISC catalytic component 3
ISO
RGD
PMID:20484662
RGD:4144862
NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
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Ago4
argonaute RISC component 4
ISO
RGD
PMID:20484662
RGD:4144862
NCBI chr 5:138,780,446...138,825,898
Ensembl chr 5:138,783,069...138,825,632
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Cnot1
CCR4-NOT transcription complex, subunit 1
ISO
RGD
PMID:23337855
RGD:9850101
NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574
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Cnot10
CCR4-NOT transcription complex, subunit 10
ISO
RGD
PMID:23337855
RGD:9850101
NCBI chr 8:114,280,486...114,330,110
Ensembl chr 8:114,280,490...114,330,107
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Cnot2
CCR4-NOT transcription complex, subunit 2
ISO
RGD
PMID:23337855
RGD:9850101
NCBI chr 7:52,130,445...52,222,338
Ensembl chr 7:52,130,441...52,223,575
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Cnot3
CCR4-NOT transcription complex, subunit 3
ISO
RGD
PMID:23337855
RGD:9850101
NCBI chr 1:65,555,924...65,572,167
Ensembl chr 1:65,555,924...65,572,167
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Cnot6
CCR4-NOT transcription complex, subunit 6
ISO
RGD
PMID:23337855
RGD:9850101
NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025
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Cnot6l
CCR4-NOT transcription complex, subunit 6-like
ISO
RGD
PMID:23337855
RGD:9850101
NCBI chr14:13,410,499...13,502,511
Ensembl chr14:13,411,281...13,498,203
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Cnot7
CCR4-NOT transcription complex, subunit 7
ISO
RGD
PMID:23337855
RGD:9850101
NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
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Cnot8
CCR4-NOT transcription complex, subunit 8
ISO
RGD
PMID:23337855
RGD:9850101
NCBI chr10:42,281,614...42,294,740
Ensembl chr10:42,281,722...42,294,730
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Cnot9
CCR4-NOT transcription complex subunit 9
ISO
RGD
PMID:23337855
RGD:9850101
NCBI chr 9:76,084,269...76,109,111
Ensembl chr 9:76,084,334...76,109,100
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Dcp1b
decapping mRNA 1B
ISO
RGD
PMID:24352420
RGD:9850104
NCBI chr 4:152,358,267...152,395,747
Ensembl chr 4:152,358,241...152,397,145
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Dcp2
decapping mRNA 2
ISO
RGD
PMID:24352420
RGD:9850104
NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
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Ddx6
DEAD-box helicase 6
ISO
RGD
PMID:24352420
RGD:9850104
NCBI chr 8:44,931,127...44,967,773
Ensembl chr 8:44,931,974...44,964,405
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Dgcr8
DGCR8 microprocessor complex subunit
ISO
RGD
PMID:20661255
RGD:4144851
NCBI chr11:82,704,673...82,737,251
Ensembl chr11:82,704,729...82,737,242
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Dicer1
dicer 1 ribonuclease III
ISO
RGD
PMID:20661255
RGD:4144851
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
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Drosha
drosha ribonuclease III
ISO
RGD
PMID:20661255
RGD:4144851
NCBI chr 2:61,864,886...61,976,688
Ensembl chr 2:61,864,970...61,976,688
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Edc3
enhancer of mRNA decapping 3
ISO
RGD
PMID:24352420
RGD:9850104
NCBI chr 8:58,106,147...58,151,685
Ensembl chr 8:58,106,175...58,151,671
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Edc4
enhancer of mRNA decapping 4
ISO
RGD
PMID:24352420
RGD:9850104
NCBI chr19:33,774,062...33,786,054
Ensembl chr19:33,774,055...33,787,758
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Pabpc1
poly(A) binding protein, cytoplasmic 1
ISO
RGD
PMID:23337855
RGD:9850101
NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744
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Pan2
poly(A) specific ribonuclease subunit PAN2
ISO
RGD
PMID:23337855
RGD:9850101
NCBI chr 7:729,146...747,744
Ensembl chr 7:729,562...747,744
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Pan3
poly(A) specific ribonuclease subunit PAN3
ISO
RGD
PMID:23337855
RGD:9850101
NCBI chr12:7,476,707...7,595,384
Ensembl chr12:7,476,697...7,599,204
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Patl1
PAT1 homolog 1, processing body mRNA decay factor
ISO
RGD
PMID:24352420
RGD:9850104
NCBI chr 1:208,831,115...208,862,904
Ensembl chr 1:208,831,115...208,862,857
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Ran
RAN, member RAS oncogene family
ISO
RGD
PMID:19965479
RGD:4144860
NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276
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Tarbp2
Tarbp2 subunit of RISC loading complex
ISO
RGD
PMID:20661255
RGD:4144851
NCBI chr 7:133,649,118...133,654,306
Ensembl chr 7:133,649,090...133,654,314
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Tnrc6a
trinucleotide repeat containing adaptor 6A
ISO
RGD
PMID:20484662
RGD:4144862
NCBI chr 1:177,561,898...177,715,669
Ensembl chr 1:177,646,030...177,715,660
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Tnrc6b
trinucleotide repeat containing adaptor 6B
ISO
RGD
PMID:20484662
RGD:4144862
NCBI chr 7:112,252,351...112,469,829
Ensembl chr 7:112,252,359...112,461,790
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Tnrc6c
trinucleotide repeat containing adaptor 6C
ISO
RGD
PMID:20484662
RGD:4144862
NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194
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Tut4
terminal uridylyl transferase 4
ISO
RGD
PMID:23622238
RGD:9850106
NCBI chr 5:123,201,723...123,306,582
Ensembl chr 5:123,203,003...123,306,465
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Tut7
terminal uridylyl transferase 7
ISO
RGD
PMID:23622238
RGD:9850106
NCBI chr17:4,849,287...4,903,542
Ensembl chr17:4,849,283...4,903,169
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Xpo5
exportin 5
ISO
RGD
PMID:19965479
RGD:4144860
NCBI chr 9:14,740,182...14,778,171
Ensembl chr 9:14,740,182...14,778,171
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all