PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: urinary bladder cancer pathway
Accession: PW:0000610
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Definition: Bladder cancer groups several types of malignant tumors of the urinary bladder. It is more prevalent in men than in women and combines both risk factors such as tobacco and exposure to certain carcinogens and genetic factors. Mutations in genes involved in a number of signaling pathways have been implicated in the development of these conditions.
Synonyms: exact_synonym: bladder cancer pathway
related_synonym: KEGG:05219; bladder neoplasm pathway
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Braf
B-Raf proto-oncogene, serine/threonine kinase
IEA
KEGG
rno:05219
NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
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Ccnd1
cyclin D1
IEA
KEGG
rno:05219
NCBI chr 1:200,089,002...200,098,524
Ensembl chr 1:200,089,002...200,098,602
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Cdh1
cadherin 1
IEA
KEGG
rno:05219
NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
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Cdk4
cyclin-dependent kinase 4
IEA
KEGG
rno:05219
NCBI chr 7:62,886,124...62,889,562
Ensembl chr 7:62,883,105...62,942,403
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Cdkn1a
cyclin-dependent kinase inhibitor 1A
IEA
KEGG
rno:05219
NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
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Cdkn2a
cyclin-dependent kinase inhibitor 2A
IEA
KEGG
rno:05219
NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
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Dapk1
death associated protein kinase 1
IEA
KEGG
rno:05219
NCBI chr17:3,930,223...4,090,991
Ensembl chr17:3,930,213...4,090,991
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Dapk3
death-associated protein kinase 3
IEA
KEGG
rno:05219
NCBI chr 7:8,524,182...8,532,552
Ensembl chr 7:8,524,183...8,532,558
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E2f1
E2F transcription factor 1
IEA
KEGG
rno:05219
NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
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E2f3
E2F transcription factor 3
IEA
KEGG
rno:05219
NCBI chr17:34,601,756...34,679,139
Ensembl chr17:34,601,830...34,676,253
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Egf
epidermal growth factor
IEA
KEGG
rno:05219
NCBI chr 2:218,219,408...218,302,359
Ensembl chr 2:218,219,415...218,302,064
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Egfr
epidermal growth factor receptor
IEA
KEGG
rno:05219
NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382
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Erbb2
erb-b2 receptor tyrosine kinase 2
IEA
KEGG
rno:05219
NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
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Fgfr3
fibroblast growth factor receptor 3
IEA
KEGG
rno:05219
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
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Hras
HRas proto-oncogene, GTPase
IEA
KEGG
rno:05219
NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
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Kras
KRAS proto-oncogene, GTPase
IEA
KEGG
rno:05219
NCBI chr 4:178,185,418...178,218,484
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Map2k1
mitogen activated protein kinase kinase 1
IEA
KEGG
rno:05219
NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
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Map2k2
mitogen activated protein kinase kinase 2
IEA
KEGG
rno:05219
NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243
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Mapk1
mitogen activated protein kinase 1
IEA
KEGG
rno:05219
NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
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Mapk3
mitogen activated protein kinase 3
IEA
KEGG
rno:05219
NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
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Mdm2
MDM2 proto-oncogene
IEA
KEGG
rno:05219
NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
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Mmp1
matrix metallopeptidase 1
IEA
KEGG
rno:05219
NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
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Mmp2
matrix metallopeptidase 2
IEA
KEGG
rno:05219
NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870
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Mmp9
matrix metallopeptidase 9
IEA
KEGG
rno:05219
NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
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Myc
MYC proto-oncogene, bHLH transcription factor
IEA
KEGG
rno:05219
NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
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Nras
NRAS proto-oncogene, GTPase
IEA
KEGG
rno:05219
NCBI chr 2:190,582,885...190,593,509
Ensembl chr 2:190,582,918...190,591,626
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Pgf
placental growth factor
IEA
KEGG
rno:05219
NCBI chr 6:104,816,102...104,826,685
Ensembl chr 6:104,816,104...104,826,685
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Raf1
Raf-1 proto-oncogene, serine/threonine kinase
IEA
KEGG
rno:05219
NCBI chr 4:148,679,534...148,740,265
Ensembl chr 4:148,679,530...148,740,317
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Rassf1
Ras association domain family member 1
IEA
KEGG
rno:05219
NCBI chr 8:108,225,023...108,236,164
Ensembl chr 8:108,225,023...108,236,164
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Rb1
RB transcriptional corepressor 1
IEA
KEGG
rno:05219
NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
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Tp53
tumor protein p53
IEA
KEGG
rno:05219
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
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Tymp
thymidine phosphorylase
IEA
KEGG
rno:05219
NCBI chr 7:120,438,768...120,444,088
Ensembl chr 7:120,438,770...120,443,874 Ensembl chr 7:120,438,770...120,443,874
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Vegfa
vascular endothelial growth factor A
IEA
KEGG
rno:05219
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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Vegfb
vascular endothelial growth factor B
IEA
KEGG
rno:05219
NCBI chr 1:204,172,297...204,178,046
Ensembl chr 1:204,172,225...204,177,944
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Vegfc
vascular endothelial growth factor C
IEA
KEGG
rno:05219
NCBI chr16:37,712,251...37,827,845
Ensembl chr16:37,712,262...37,827,848
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Vegfd
vascular endothelial growth factor D
IEA
KEGG
rno:05219
NCBI chr X:30,073,122...30,108,413
Ensembl chr X:30,074,163...30,108,295
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