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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:pentose phosphate pathway - non-oxidative phase
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Accession:PW:0000574 term browser browse the term
Definition:The non-oxidative (circular) phase of the pentose phosphate pathway involves conversion of ribulose-5-phosphate to ribose-5-phosphate, important in the synthesis of nucleotides and nucleic acids, or of 3 or 6 carbon sugars.
Synonyms:related_synonym: pentose-phosphate shunt, non-oxidative branch



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pentose phosphate pathway - non-oxidative phase term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPE ribulose-5-phosphate-3-epimerase ISO RGD PMID:12721358 RGD:1641814 NCBI chr 2:210,002,638...210,022,260
Ensembl chr 2:210,002,565...210,022,260
JBrowse link
G RPIA ribose 5-phosphate isomerase A ISO RGD PMID:12721358 RGD:1641814 NCBI chr 2:88,691,673...88,750,929
Ensembl chr 2:88,691,673...88,750,929
JBrowse link
G TALDO1 transaldolase 1 ISO RGD PMID:8477719 PMID:12721358 RGD:1641803, RGD:1641814 NCBI chr11:747,464...765,012
Ensembl chr11:747,415...765,012
JBrowse link
G TKT transketolase TAS
ISO
RGD PMID:9924800 PMID:16116031 PMID:12721358 RGD:1641798, RGD:1580394, RGD:1641814 NCBI chr 3:53,224,712...53,256,022
Ensembl chr 3:53,224,712...53,256,052
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 5957
    classic metabolic pathway 1803
      carbohydrate metabolic pathway 540
        pentose phosphate pathway 27
          pentose phosphate pathway - non-oxidative phase 4
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