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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:homeostasis pathway
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Accession:PW:0000355 term browser browse the term
Definition:Those pathways involved in the maintenance of the internal environment of an organism, the adequate levels of substances and nutrients, the stability of normal body states and the feedback regulatory mechanisms that control them.
Synonyms:related_synonym: homeostatic process



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adenosine monophosphate-activated protein kinase (AMPK) signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAB39 calcium binding protein 39 ISO RGD PMID:14511394 PMID:15509864 RGD:1600678 RGD:1600691 NCBI chr15:131,492,575...131,584,963
Ensembl chr15:131,492,578...131,584,962
JBrowse link
G CALM1 calmodulin 1 ISO RGD PMID:16054095 RGD:2311420 NCBI chr 7:112,160,823...112,171,754
Ensembl chr 7:112,160,806...112,171,744
JBrowse link
G CALM2 calmodulin 2 ISO RGD PMID:16054095 RGD:2311420 NCBI chr 3:93,371,765...93,386,378
Ensembl chr 3:93,372,045...93,386,218
JBrowse link
G CALM3 calmodulin 3 ISO RGD PMID:16054095 RGD:2311420 NCBI chr 6:52,506,979...52,516,704
Ensembl chr 6:52,506,674...52,516,703
JBrowse link
G CAMKK1 calcium/calmodulin dependent protein kinase kinase 1 ISO RGD PMID:16054095 RGD:2311420 NCBI chr12:49,922,837...49,950,668
Ensembl chr12:49,922,855...49,950,605
JBrowse link
G CAMKK2 calcium/calmodulin dependent protein kinase kinase 2 ISO RGD PMID:16054095 RGD:2311420 NCBI chr14:31,307,418...31,366,504
Ensembl chr14:31,312,049...31,366,499
JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO RGD PMID:30868489 RGD:25823184 NCBI chr 2:4,250,642...4,293,914
Ensembl chr 2:4,233,099...4,293,911
JBrowse link
G PPM1E protein phosphatase, Mg2+/Mn2+ dependent 1E ISO RGD PMID:20801214 RGD:7794756 NCBI chr12:35,051,936...35,262,698
Ensembl chr12:35,051,952...35,262,703
JBrowse link
G PPM1F protein phosphatase, Mg2+/Mn2+ dependent 1F ISO RGD PMID:20801214 RGD:7794756 NCBI chr14:50,040,612...50,083,047
Ensembl chr14:50,040,663...50,063,325
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:21782450 RGD:7794757 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,119,939...5,123,617
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:21782450 RGD:7794757 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,688...110,474,891
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:21782450 RGD:7794757 NCBI chr17:59,963,560...59,967,143
Ensembl chr17:59,964,585...59,967,113
JBrowse link
G PPP2CA protein phosphatase 2 catalytic subunit alpha ISO RGD PMID:21782450 RGD:7794757 NCBI chr 2:136,497,780...136,522,630
Ensembl chr 2:136,494,541...136,522,646
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 ISO RGD PMID:12829246 PMID:14511394 PMID:15509864 RGD:1600678 RGD:1600679 RGD:1600691 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,324...25,783,707
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 ISO RGD PMID:12829246 PMID:14511394 PMID:15509864 RGD:1600678 RGD:1600679 RGD:1600691 NCBI chr 6:155,683,392...155,754,283
Ensembl chr 6:155,681,784...155,754,278
JBrowse link
G PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 ISO RGD PMID:12829246 PMID:15509864 RGD:1600678 RGD:1600679 NCBI chr14:33,201,359...33,217,641
Ensembl chr14:33,201,669...33,217,539
JBrowse link
G PRKAB2 protein kinase AMP-activated non-catalytic subunit beta 2 ISO RGD PMID:12829246 PMID:15509864 RGD:1600678 RGD:1600679 NCBI chr 4:100,378,047...100,394,346
Ensembl chr 4:100,378,071...100,394,338
JBrowse link
G PRKAG1 protein kinase AMP-activated non-catalytic subunit gamma 1 ISO RGD PMID:12829246 PMID:14511394 PMID:15509864 RGD:1600678 RGD:1600679 RGD:1600691 NCBI chr 5:15,033,051...15,049,676
Ensembl chr 5:15,033,058...15,049,735
JBrowse link
G PRKAG2 protein kinase AMP-activated non-catalytic subunit gamma 2 ISO RGD PMID:12829246 PMID:15509864 RGD:1600678 RGD:1600679 NCBI chr18:5,475,077...5,744,761
Ensembl chr18:5,475,077...5,744,657
JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 ISO RGD PMID:12829246 PMID:15509864 RGD:1600678 RGD:1600679 NCBI chr15:120,859,486...120,866,308
Ensembl chr15:120,855,201...120,866,332
JBrowse link
G STK11 serine/threonine kinase 11 ISO RGD PMID:14511394 PMID:15509864 RGD:1600678 RGD:1600691 NCBI chr 2:77,229,888...77,249,322
Ensembl chr 2:77,230,372...77,249,327
JBrowse link
G STRADA STE20 related adaptor alpha ISO RGD PMID:14511394 PMID:15509864 RGD:1600678 RGD:1600691 NCBI chr12:15,191,793...15,222,709
Ensembl chr12:15,191,782...15,223,558
JBrowse link
G TSC1 TSC complex subunit 1 ISO RGD PMID:31787541 RGD:25823196 NCBI chr 1:272,636,530...272,685,948
Ensembl chr 1:272,636,532...272,685,951
JBrowse link
alpha-helical insertion pathway of mitochondrial protein import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOMM70 translocase of outer mitochondrial membrane 70 ISO RGD PMID:25633533 RGD:10412658 NCBI chr13:158,577,026...158,629,878
Ensembl chr13:158,577,379...158,628,262
JBrowse link
altered citric acid cycle pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FH fumarate hydratase ISO RGD PMID:17211469 RGD:6907135 NCBI chr10:12,404,143...12,431,843
Ensembl chr10:12,404,176...12,431,824
JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B ISO RGD PMID:21771581 RGD:6907134 NCBI chr 6:75,648,362...75,678,111
Ensembl chr 6:75,648,215...75,678,378
JBrowse link
G SDHD succinate dehydrogenase complex subunit D ISO RGD PMID:21771581 RGD:6907134 NCBI chr 9:39,790,654...39,803,602
Ensembl chr 9:39,790,595...39,803,950
JBrowse link
altered DNA modification pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MBD4 methyl-CpG binding domain 4, DNA glycosylase ISO in silico assessment of loss of DNA-protein interactions and observed enhancement of DNA repair capacity (DRC) in the context of nucleotide excision repair (NER) pathway for SNP RGD PMID:24004570 RGD:9588971 NCBI chr13:68,816,677...68,828,559
Ensembl chr13:68,816,679...68,828,580
JBrowse link
altered energy homeostasis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEP leptin ISO RGD PMID:11102451 PMID:15703762 RGD:1357910 RGD:61790 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,323
JBrowse link
G LEPR leptin receptor ISO RGD PMID:11102451 PMID:15703762 RGD:1357910 RGD:61790 NCBI chr 6:146,802,297...146,896,152
Ensembl chr 6:146,801,954...146,895,995
JBrowse link
G MC4R melanocortin 4 receptor ISO RGD PMID:15189116 RGD:1357925 NCBI chr 1:160,772,013...160,774,124
Ensembl chr 1:160,772,013...160,774,124
JBrowse link
G PCSK1 proprotein convertase subtilisin/kexin type 1 ISO RGD PMID:11874690 RGD:1357926 NCBI chr 2:103,004,794...103,050,707
Ensembl chr 2:103,004,794...103,050,839
JBrowse link
G POMC proopiomelanocortin ISO RGD PMID:11874690 RGD:1357926 NCBI chr 3:113,661,712...113,668,558
Ensembl chr 3:113,661,004...113,670,418
JBrowse link
altered folate cycle metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 7:53,748,585...53,794,777
Ensembl chr 7:53,748,653...53,794,706
JBrowse link
G DHFR dihydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 2:89,230,660...89,255,830 JBrowse link
G FOLR1 folate receptor alpha ISO RGD PMID:22108709 RGD:7242557 NCBI chr 9:6,753,513...6,760,433
Ensembl chr 9:6,757,040...6,760,402
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387
JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22108709 RGD:7242557 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763
JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,228...74,270,783
JBrowse link
G SLC46A1 solute carrier family 46 member 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr12:44,677,499...44,686,277
Ensembl chr12:44,677,502...44,686,250
JBrowse link
altered folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387
JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO RGD PMID:22353665 RGD:7242562 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22353665 RGD:7242562 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763
JBrowse link
altered Hedgehog signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BOC BOC cell adhesion associated, oncogene regulated ISO RGD PMID:18772397 RGD:5490966 NCBI chr13:146,625,218...146,703,165
Ensembl chr13:146,628,134...146,703,098
JBrowse link
G DHH desert hedgehog signaling molecule ISO RGD PMID:11118005 RGD:634737 NCBI chr 5:15,114,524...15,119,610
Ensembl chr 5:15,114,527...15,119,577
JBrowse link
G GLI1 GLI family zinc finger 1 ISO RGD PMID:18772397 PMID:21186299 RGD:5490966 RGD:5491005 NCBI chr 5:22,736,325...22,747,421
Ensembl chr 5:22,739,900...22,747,421
JBrowse link
G GLI3 GLI family zinc finger 3 ISO RGD PMID:18772397 RGD:5490966 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,072...52,697,900
JBrowse link
G LRP2 LDL receptor related protein 2 ISO RGD PMID:18772397 RGD:5490966 NCBI chr15:75,565,299...75,754,604
Ensembl chr15:75,565,303...75,716,694
JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:19506583 RGD:5490965 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,994...2,555,484
JBrowse link
G SMO smoothened, frizzled class receptor ISO RGD PMID:9422511 RGD:704355 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,743...19,478,898
JBrowse link
altered hypoxia inducible factor pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VHL von Hippel-Lindau tumor suppressor ISO RGD PMID:22035299 RGD:6907133 NCBI chr13:66,334,535...66,342,401
Ensembl chr13:66,334,591...66,342,654
JBrowse link
altered insulin responsive facilitative sugar transporter mediated glucose transport pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT2 AKT serine/threonine kinase 2 ISO RGD PMID:21979934 RGD:7248543 NCBI chr 6:48,555,785...48,620,472
Ensembl chr 6:48,555,795...48,587,919
JBrowse link
G TBC1D4 TBC1 domain family member 4 ISO RGD PMID:19470471 RGD:7248544 NCBI chr11:47,543,808...47,760,928
Ensembl chr11:47,543,815...47,828,208
JBrowse link
altered insulin secretion pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC8 ATP binding cassette subfamily C member 8 ISO DNA:missense mutation::A1369S RGD PMID:17259403 RGD:2313628 NCBI chr 2:41,666,974...41,754,624
Ensembl chr 2:41,666,909...41,754,620
JBrowse link
G KCNJ11 potassium inwardly rectifying channel subfamily J member 11 ISO DNA:missense mutation::p.E23K (human)
polymorphisms in the gene are linked to altered insulin secretion; E23K polymorphism appears to confer susceptibility to diabetes type-2 in Caucasian population
RGD PMID:15565284 PMID:17259403 RGD:2313610 RGD:2313628 NCBI chr 2:41,756,637...41,760,340
Ensembl chr 2:41,757,356...41,765,555
JBrowse link
altered insulin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INS insulin ISO RGD PMID:9809695 RGD:2313694 NCBI chr 2:1,496,842...1,498,052
Ensembl chr 2:1,496,842...1,497,841
JBrowse link
G INSR insulin receptor ISO RGD PMID:9809695 RGD:2313694 NCBI chr 2:71,797,209...71,939,923
Ensembl chr 2:71,797,204...71,936,104
JBrowse link
altered leptin system pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INSR insulin receptor ISO increased basal hypothalamic leptin signaling without changes in leptin receptor expression after antisense-mediated hypothalamus-specific Insr knock-down RGD PMID:17585961 RGD:2290473 NCBI chr 2:71,797,209...71,939,923
Ensembl chr 2:71,797,204...71,936,104
JBrowse link
G LEP leptin ISO RGD PMID:11102451 PMID:15703762 RGD:1357910 RGD:61790 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,323
JBrowse link
G LEPR leptin receptor ISO RGD PMID:11102451 PMID:15703762 PMID:17229951 RGD:1357910 RGD:1600611 RGD:61790 NCBI chr 6:146,802,297...146,896,152
Ensembl chr 6:146,801,954...146,895,995
JBrowse link
altered melanocortin system pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRP agouti related neuropeptide ISO RGD PMID:15189116 RGD:1357925 NCBI chr 6:28,132,614...28,135,594
Ensembl chr 6:28,132,615...28,134,900
JBrowse link
G MC4R melanocortin 4 receptor ISO RGD PMID:15189116 RGD:1357925 NCBI chr 1:160,772,013...160,774,124
Ensembl chr 1:160,772,013...160,774,124
JBrowse link
G PCSK1 proprotein convertase subtilisin/kexin type 1 ISO RGD PMID:11874690 PMID:15189116 RGD:1357925 RGD:1357926 NCBI chr 2:103,004,794...103,050,707
Ensembl chr 2:103,004,794...103,050,839
JBrowse link
G POMC proopiomelanocortin ISO RGD PMID:11874690 PMID:15189116 RGD:1357925 RGD:1357926 NCBI chr 3:113,661,712...113,668,558
Ensembl chr 3:113,661,004...113,670,418
JBrowse link
G SDC1 syndecan 1 ISO RGD PMID:15189116 RGD:1357925 NCBI chr 3:117,987,585...118,011,886
Ensembl chr 3:117,987,557...118,011,884
JBrowse link
altered mitochondrial autophagy pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PINK1 PTEN induced kinase 1 ISO RGD PMID:24735649 RGD:10450527 NCBI chr 6:78,863,195...78,884,663
Ensembl chr 6:78,863,190...78,884,640
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24735649 RGD:10450527 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,312...6,730,872
JBrowse link
altered retinoid cycle metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 4:123,202,720...123,333,044
Ensembl chr 4:123,202,753...123,331,144
JBrowse link
G LRAT lecithin retinol acyltransferase ISO RGD PMID:20212494 RGD:8547536 NCBI chr 8:74,412,226...74,428,713
Ensembl chr 8:74,409,461...74,419,681
JBrowse link
G RBP3 retinol binding protein 3 ISO RGD PMID:20212494 RGD:8547536 NCBI chr14:88,491,701...88,503,388
Ensembl chr14:88,490,013...88,504,510
JBrowse link
G RDH12 retinol dehydrogenase 12 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 7:91,481,238...91,493,838
Ensembl chr 7:91,481,272...91,493,809
JBrowse link
G RLBP1 retinaldehyde binding protein 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 7:54,783,965...54,800,008
Ensembl chr 7:54,776,113...54,889,014
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 6:144,206,078...144,229,471
Ensembl chr 6:144,206,078...144,229,467
JBrowse link
altered surfactant homeostasis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA3 ATP binding cassette subfamily A member 3 ISO RGD PMID:15985750 RGD:1549859 NCBI chr 3:39,689,133...39,732,466
Ensembl chr 3:39,698,895...39,732,978
JBrowse link
altered vascular endothelial growth factor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLT4 fms related receptor tyrosine kinase 4 ISO RGD PMID:15563310 RGD:1334463 NCBI chr 2:78,076,008...78,115,137
Ensembl chr 2:78,076,080...78,115,126
JBrowse link
altered vascular endothelial growth factor signaling pathway involving proteins affecting its expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDR kinase insert domain receptor ISO RGD PMID:18221855 RGD:2292019 NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,122...41,856,336
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:18221855 RGD:2292019 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366
JBrowse link
altered vascular endothelial growth factor signaling pathway involving the main players term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLT4 fms related receptor tyrosine kinase 4 ISO RGD PMID:15563310 RGD:1334463 NCBI chr 2:78,076,008...78,115,137
Ensembl chr 2:78,076,080...78,115,126
JBrowse link
G KDR kinase insert domain receptor ISO RGD PMID:18221855 RGD:2292019 NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,122...41,856,336
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:18221855 RGD:2292019 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,366
JBrowse link
altered visual phototransduction pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNGA1 cyclic nucleotide gated channel subunit alpha 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 8:37,896,460...37,968,935
Ensembl chr 8:37,896,459...37,969,344
JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 6:19,752,734...19,865,830 JBrowse link
G GUCA1B guanylate cyclase activator 1B ISO RGD PMID:20212494 RGD:8547536 NCBI chr 7:37,297,901...37,311,158
Ensembl chr 7:37,297,908...37,310,170
JBrowse link
G PDE6A phosphodiesterase 6A ISO RGD PMID:20212494 RGD:8547536 NCBI chr 2:150,926,652...150,986,050
Ensembl chr 2:150,927,770...150,985,318
JBrowse link
G PDE6B phosphodiesterase 6B ISO RGD PMID:20212494 RGD:8547536 NCBI chr 8:80,378...111,960
Ensembl chr 8:80,378...110,672
JBrowse link
G PDE6G phosphodiesterase 6G ISO RGD PMID:20212494 RGD:8547536 NCBI chr12:1,235,886...1,239,808
Ensembl chr12:1,236,210...1,239,306
JBrowse link
G RHO rhodopsin ISO RGD PMID:20212494 RGD:8547536 NCBI chr13:68,908,578...68,913,651
Ensembl chr13:68,908,578...68,913,651
JBrowse link
G SAG S-antigen visual arrestin ISO RGD PMID:20212494 RGD:8547536 NCBI chr15:133,704,975...133,741,844
Ensembl chr15:133,705,008...133,741,798
JBrowse link
angiotensin (1-7) signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 ISO RGD PMID:10642323 PMID:15283675 RGD:1581953 RGD:1598433 NCBI chr12:15,394,487...15,414,609
Ensembl chr12:15,394,487...15,414,703
JBrowse link
G ACE2 angiotensin converting enzyme 2 ISO RGD PMID:15638741 RGD:1581742 NCBI chr  X:12,099,849...12,152,204
Ensembl chr  X:12,093,242...12,151,286
JBrowse link
G AGT angiotensinogen ISO RGD PMID:15951342 RGD:1581938 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
JBrowse link
G MAS1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:15951342 PMID:16520407 RGD:1581931 RGD:1581938 NCBI chr 1:7,527,566...7,542,110
Ensembl chr 1:7,527,861...7,528,838
JBrowse link
G MME membrane metalloendopeptidase ISO RGD PMID:10642323 PMID:15638741 PMID:16520407 RGD:1581742 RGD:1581931 RGD:1581953 NCBI chr13:95,018,395...95,122,977
Ensembl chr13:95,019,081...95,126,045
JBrowse link
angiotensin II signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 ISO RGD PMID:15638741 RGD:1581742 NCBI chr12:15,394,487...15,414,609
Ensembl chr12:15,394,487...15,414,703
JBrowse link
G AGT angiotensinogen ISO RGD PMID:16141358 RGD:1581847 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:15590154 RGD:1579760 NCBI chr13:88,934,873...88,980,317
Ensembl chr13:88,934,868...88,983,105
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:14657020 RGD:1566502 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388
JBrowse link
G CCL2 chemokine (C-C motif) ligand 2 ISO RGD PMID:14684844 RGD:1582323 NCBI chr12:40,798,109...40,800,013
Ensembl chr12:40,798,109...40,800,026
JBrowse link
G JAK2 Janus kinase 2 ISO RGD PMID:16269269 RGD:1600094 NCBI chr 1:216,849,744...217,002,310
Ensembl chr 1:216,848,689...217,002,148
JBrowse link
G OLR1 oxidized low density lipoprotein receptor 1 ISO RGD PMID:12661921 RGD:1580992 NCBI chr 5:61,799,356...61,809,691
Ensembl chr 5:61,799,286...61,810,624
JBrowse link
G PDPK1 3-phosphoinositide dependent protein kinase 1 ISO RGD PMID:14585963 RGD:1581775 NCBI chr 3:39,429,928...39,512,623
Ensembl chr 3:39,432,058...39,512,601
JBrowse link
G PLA2G6 phospholipase A2 group VI ISO RGD PMID:17613534 RGD:12910844 NCBI chr 5:9,713,809...9,777,921
Ensembl chr 5:9,713,873...9,777,918
JBrowse link
G PRKCZ protein kinase C zeta ISO RGD PMID:16113073 RGD:1642674 NCBI chr 6:64,073,343...64,159,187
Ensembl chr 6:64,068,577...64,163,472
JBrowse link
angiotensin II signaling pathway via AT1 receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:16141358 RGD:1581847 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:9287353 PMID:10977869 PMID:12446719 PMID:14559250 RGD:1581825 RGD:2316188 RGD:5133683 RGD:629553 NCBI chr13:88,934,873...88,980,317
Ensembl chr13:88,934,868...88,983,105
JBrowse link
G AGTRAP angiotensin II receptor associated protein ISO RGD PMID:17875818 RGD:2314353 NCBI chr 6:71,825,319...71,836,812 JBrowse link
G ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 ISO RGD PMID:14559250 RGD:2316188 NCBI chr 9:7,238,043...7,301,085
Ensembl chr 9:7,233,911...7,301,073
JBrowse link
G ARRB1 arrestin beta 1 ISO RGD PMID:16304060 RGD:5133417 NCBI chr 9:9,516,944...9,597,446
Ensembl chr 9:9,516,947...9,597,976
JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:16304060 RGD:5133417 NCBI chr12:52,161,776...52,170,362
Ensembl chr12:52,161,778...52,170,342
JBrowse link
G GNA11 G protein subunit alpha 11 ISO RGD PMID:16141358 RGD:1581847 NCBI chr 2:75,439,405...75,456,855
Ensembl chr 2:75,437,201...75,457,092
JBrowse link
G GNAQ G protein subunit alpha q ISO RGD PMID:16141358 RGD:1581847 NCBI chr 1:230,607,469...230,906,988
Ensembl chr 1:230,605,265...230,907,674
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 ISO RGD PMID:16304060 RGD:5133417 NCBI chr 2:5,209,435...5,227,543
Ensembl chr 2:5,209,439...5,227,758
JBrowse link
G GRK3 G protein-coupled receptor kinase 3 ISO RGD PMID:16304060 RGD:5133417 NCBI chr14:43,305,255...43,445,626
Ensembl chr14:43,224,930...43,442,965
JBrowse link
G GRK5 G protein-coupled receptor kinase 5 ISO RGD PMID:16304060 RGD:5133417 NCBI chr14:129,113,933...129,351,135
Ensembl chr14:129,113,603...129,347,152
JBrowse link
G GRK6 G protein-coupled receptor kinase 6 ISO RGD PMID:16304060 RGD:5133417 NCBI chr 2:80,496,105...80,527,208
Ensembl chr 2:80,508,979...80,527,210
JBrowse link
G JAK2 Janus kinase 2 ISO RGD PMID:9287353 PMID:9314843 RGD:5133683 RGD:6478796 NCBI chr 1:216,849,744...217,002,310
Ensembl chr 1:216,848,689...217,002,148
JBrowse link
G RGS2 regulator of G protein signaling 2 ISO RGD PMID:12588881 RGD:5133418 NCBI chr10:936,836...940,083
Ensembl chr10:936,789...940,098
JBrowse link
G TYK2 tyrosine kinase 2 ISO RGD PMID:9314843 RGD:6478796 NCBI chr 2:69,157,774...69,183,555
Ensembl chr 2:69,157,811...69,183,456
JBrowse link
angiotensin II signaling pathway via AT2 receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:16286564 PMID:16286568 PMID:22949090 RGD:1582434 RGD:1582435 RGD:7401256 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:10977869 PMID:22949090 RGD:1581825 RGD:7401256 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388
JBrowse link
G CNKSR1 connector enhancer of kinase suppressor of Ras 1 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 6:83,598,363...83,608,617
Ensembl chr 6:83,598,372...83,608,607
JBrowse link
G DUSP1 dual specificity phosphatase 1 ISO RGD PMID:18804122 RGD:5133675 NCBI chr16:51,457,924...51,461,095
Ensembl chr16:51,458,020...51,461,086
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 5:21,474,218...21,495,040
Ensembl chr 5:21,474,475...21,495,038
JBrowse link
G GNAI2 G protein subunit alpha i2 ISO RGD PMID:22949090 RGD:7401256 NCBI chr13:32,705,326...32,733,804
Ensembl chr13:32,705,321...32,733,794
JBrowse link
G GNAI3 G protein subunit alpha i3 ISO RGD PMID:22949090 RGD:7401256 NCBI chr 4:110,527,363...110,579,331
Ensembl chr 4:110,525,546...110,579,053
JBrowse link
G MTUS1 microtubule associated scaffold protein 1 ISO RGD PMID:20889352 RGD:5133679 NCBI chr17:5,331,668...5,507,212
Ensembl chr17:5,329,750...5,507,119
JBrowse link
G PTPN6 protein tyrosine phosphatase non-receptor type 6 ISO RGD PMID:18804122 RGD:5133675 NCBI chr 5:63,762,109...63,779,086
Ensembl chr 5:63,762,112...63,808,350
JBrowse link
G SLC9A6 solute carrier family 9 member A6 ISO RGD PMID:20889352 RGD:5133679 NCBI chr  X:111,176,461...111,233,108
Ensembl chr  X:111,176,495...111,233,099
JBrowse link
G TIMP3 TIMP metallopeptidase inhibitor 3 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 5:12,185,816...12,242,599
Ensembl chr 5:12,185,818...12,242,581
JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742
JBrowse link
angiotensin III signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11295571 RGD:1582124 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:11295571 RGD:1582124 NCBI chr13:88,934,873...88,980,317
Ensembl chr13:88,934,868...88,983,105
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:11295571 RGD:1582124 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388
JBrowse link
G ENPEP glutamyl aminopeptidase ISO RGD PMID:15638741 PMID:16537183 RGD:1581649 RGD:1581742 NCBI chr 8:111,765,839...111,858,349
Ensembl chr 8:111,748,514...111,858,510
JBrowse link
angiotensin III signaling pathway via AT1 receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11100981 RGD:1582152 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:11100981 RGD:1582152 NCBI chr13:88,934,873...88,980,317
Ensembl chr13:88,934,868...88,983,105
JBrowse link
angiotensin III signaling pathway via AT2 receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:16380540 RGD:1582118 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:16380540 RGD:1582118 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388
JBrowse link
angiotensin IV signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11282364 RGD:1582105 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
JBrowse link
G ANPEP alanyl aminopeptidase, membrane ISO RGD PMID:15638741 PMID:16537183 RGD:1581649 RGD:1581742 NCBI chr 7:55,351,081...55,373,856
Ensembl chr 7:55,351,087...55,373,881
JBrowse link
G LNPEP leucyl and cystinyl aminopeptidase ISO RGD PMID:11282364 PMID:12591177 RGD:1581864 RGD:1582105 NCBI chr 2:103,568,366...103,659,589
Ensembl chr 2:103,567,602...103,661,070
JBrowse link
G RNPEP arginyl aminopeptidase ISO RGD PMID:16537183 RGD:1581649 NCBI chr10:24,218,144...24,235,520
Ensembl chr10:24,218,139...24,235,518
JBrowse link
angiotensin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:12676165 RGD:1566511 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833
JBrowse link
atrial natriuretic peptide signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CORIN corin, serine peptidase ISO RGD PMID:17485366 RGD:1626338 NCBI chr 8:37,530,812...37,811,226
Ensembl chr 8:37,530,815...37,809,761
JBrowse link
G NPPA natriuretic peptide A ISO RGD PMID:12608696 PMID:15758553 PMID:16010968 RGD:1578335 RGD:1580001 RGD:1626242 NCBI chr 6:71,919,557...71,921,345
Ensembl chr 6:71,918,845...71,921,405
JBrowse link
G NPR1 natriuretic peptide receptor 1 ISO RGD PMID:7552344 RGD:1626243 NCBI chr 4:95,957,220...95,974,253
Ensembl chr 4:95,957,228...95,973,430
JBrowse link
beta-barrel pathway of mitochondrial protein import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTX1 metaxin 1 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 4:94,606,576...94,611,439
Ensembl chr 4:94,606,562...94,611,865
JBrowse link
G MTX2 metaxin 2 ISO RGD PMID:25305573 RGD:10412662 NCBI chr15:82,061,381...82,139,073
Ensembl chr15:82,061,385...82,139,072
JBrowse link
G SAMM50 SAMM50 sorting and assembly machinery component ISO RGD PMID:25305573 RGD:10412662 NCBI chr 5:5,035,893...5,072,550
Ensembl chr 5:5,035,895...5,071,277
JBrowse link
G TIMM10 translocase of inner mitochondrial membrane 10 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 2:13,393,225...13,396,241
Ensembl chr 2:13,393,282...13,396,439
JBrowse link
G TIMM13 translocase of inner mitochondrial membrane 13 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 2:76,146,946...76,148,163
Ensembl chr 2:76,146,867...76,155,729
JBrowse link
G TIMM8A translocase of inner mitochondrial membrane 8A ISO RGD PMID:25305573 RGD:10412662 NCBI chr  X:82,978,128...82,981,038
Ensembl chr  X:82,974,270...82,980,769
JBrowse link
G TIMM8B translocase of inner mitochondrial membrane 8 homolog B ISO RGD PMID:25305573 RGD:10412662 NCBI chr 9:39,788,164...39,790,563
Ensembl chr 9:39,787,405...39,790,718
JBrowse link
G TIMM9 translocase of inner mitochondrial membrane 9 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 1:187,485,407...187,504,452 JBrowse link
G TOMM20 translocase of outer mitochondrial membrane 20 ISO RGD PMID:25305573 RGD:10412662 NCBI chr14:56,113,087...56,127,686
Ensembl chr14:56,113,192...56,127,677
JBrowse link
G TOMM22 translocase of outer mitochondrial membrane 22 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 5:9,336,114...9,339,867
Ensembl chr 5:9,336,130...9,350,015
JBrowse link
G TOMM40 translocase of outer mitochondrial membrane 40 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 6:51,359,948...51,369,932
Ensembl chr 6:51,359,595...51,369,908
JBrowse link
G TOMM5 translocase of outer mitochondrial membrane 5 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 1:238,328,894...238,333,066 JBrowse link
G TOMM6 translocase of outer mitochondrial membrane 6 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 7:36,976,478...36,976,878
Ensembl chr 7:36,969,909...36,978,283
JBrowse link
G TOMM7 translocase of outer mitochondrial membrane 7 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 9:91,570,069...91,578,991
Ensembl chr 9:91,570,065...91,579,015
JBrowse link
G TOMM70 translocase of outer mitochondrial membrane 70 ISO RGD PMID:25305573 RGD:10412662 NCBI chr13:158,577,026...158,629,878
Ensembl chr13:158,577,379...158,628,262
JBrowse link
brain natriuretic peptide signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPPB natriuretic peptide B ISO RGD PMID:7552344 RGD:1626243 NCBI chr 6:71,930,374...71,931,843
Ensembl chr 6:71,930,382...71,932,254
JBrowse link
G NPR1 natriuretic peptide receptor 1 ISO RGD PMID:7552344 RGD:1626243 NCBI chr 4:95,957,220...95,974,253
Ensembl chr 4:95,957,228...95,973,430
JBrowse link
C-type natriuretic peptide signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPPC natriuretic peptide C ISO RGD PMID:15337698 PMID:16537417 RGD:1580149 RGD:1601488 NCBI chr15:132,504,669...132,509,688
Ensembl chr15:132,506,474...132,509,673
JBrowse link
G NPR2 natriuretic peptide receptor 2 ISO RGD PMID:16537417 RGD:1601488 NCBI chr 1:236,508,994...236,529,172
Ensembl chr 1:236,508,998...236,529,128
JBrowse link
G NPR3 natriuretic peptide receptor 3 ISO RGD PMID:15044621 RGD:1581459 NCBI chr16:18,841,540...18,929,813
Ensembl chr16:18,842,039...18,929,805
JBrowse link
calcineurin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NFATC2 nuclear factor of activated T cells 2 ISO RGD PMID:15336966 RGD:1579951 NCBI chr17:52,743,570...52,907,373
Ensembl chr17:52,743,568...52,906,821
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 ISO RGD PMID:15336966 RGD:1579951 NCBI chr 6:28,666,458...28,806,432
Ensembl chr 6:28,666,549...28,806,419
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 ISO RGD PMID:15336966 RGD:1579951 NCBI chr 7:74,918,982...74,929,688
Ensembl chr 7:74,918,984...74,929,600
JBrowse link
G PPP3CA protein phosphatase 3 catalytic subunit alpha ISO RGD PMID:15336966 RGD:1579951 NCBI chr 8:119,429,181...119,754,615
Ensembl chr 8:119,428,779...119,753,105
JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta ISO RGD PMID:15336966 RGD:1579951 NCBI chr14:76,239,497...76,305,345
Ensembl chr14:76,248,841...76,305,328
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma ISO RGD PMID:15336966 RGD:1579951 NCBI chr14:6,711,789...6,799,318
Ensembl chr14:6,711,442...6,794,667
JBrowse link
G PPP3R1 protein phosphatase 3 regulatory subunit B, alpha ISO RGD PMID:15336966 RGD:1579951 NCBI chr 3:74,004,620...74,068,173
Ensembl chr 3:74,000,517...74,068,172
JBrowse link
G PPP3R2 protein phosphatase 3 regulatory subunit B, beta ISO RGD PMID:15336966 RGD:1579951 NCBI chr 1:243,284,383...243,285,358 JBrowse link
G RCAN1 regulator of calcineurin 1 ISO RGD PMID:16415348 RGD:1581652 NCBI chr13:198,106,256...198,205,727
Ensembl chr13:198,102,098...198,205,629
JBrowse link
calcium signaling pathway via the calcium-sensing receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARRB1 arrestin beta 1 ISO RGD PMID:15637145 PMID:22192592 RGD:7207059 RGD:7207060 NCBI chr 9:9,516,944...9,597,446
Ensembl chr 9:9,516,947...9,597,976
JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:15637145 PMID:22192592 RGD:7207059 RGD:7207060 NCBI chr12:52,161,776...52,170,362
Ensembl chr12:52,161,778...52,170,342
JBrowse link
G CASR calcium sensing receptor ISO RGD PMID:12239094 PMID:15637145 PMID:22192592 RGD:7207059 RGD:7207060 RGD:7207227 NCBI chr13:138,279,785...138,364,934
Ensembl chr13:138,280,364...138,364,252
JBrowse link
G FLNA filamin A ISO RGD PMID:12239094 RGD:7207227 NCBI chr  X:124,889,934...124,915,000
Ensembl chr  X:124,890,162...124,914,992
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 ISO RGD PMID:15637145 RGD:7207060 NCBI chr 2:5,209,435...5,227,543
Ensembl chr 2:5,209,439...5,227,758
JBrowse link
G GRK3 G protein-coupled receptor kinase 3 ISO RGD PMID:15637145 RGD:7207060 NCBI chr14:43,305,255...43,445,626
Ensembl chr14:43,224,930...43,442,965
JBrowse link
G GRK4 G protein-coupled receptor kinase 4 ISO RGD PMID:15637145 RGD:7207060 NCBI chr 8:1,737,960...1,792,390
Ensembl chr 8:1,738,333...1,792,374
JBrowse link
G RGS12 regulator of G protein signaling 12 ISO RGD PMID:12239094 RGD:7207227 NCBI chr 8:1,971,390...2,074,970
Ensembl chr 8:1,963,308...2,075,971
JBrowse link
G RGS2 regulator of G protein signaling 2 ISO RGD PMID:12239094 RGD:7207227 NCBI chr10:936,836...940,083
Ensembl chr10:936,789...940,098
JBrowse link
G RGS4 regulator of G protein signaling 4 ISO RGD PMID:12239094 RGD:7207227 NCBI chr 4:87,383,336...87,390,478
Ensembl chr 4:87,383,345...87,390,893
JBrowse link
G RGS5 regulator of G protein signaling 5 ISO RGD PMID:21393447 RGD:7207228 NCBI chr 4:87,286,953...87,340,816
Ensembl chr 4:87,286,953...87,342,088
JBrowse link
G RHOA ras homolog family member A ISO RGD PMID:12239094 RGD:7207227 NCBI chr13:31,918,484...31,991,207
Ensembl chr13:31,918,834...31,986,607
JBrowse link
calcium transport pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2A1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 3:18,545,064...18,568,312
Ensembl chr 3:18,545,071...18,568,310
JBrowse link
G ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chr14:31,674,659...31,744,981
Ensembl chr14:31,674,757...31,744,969
JBrowse link
G ATP2A3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 ISO RGD PMID:19789383 RGD:7204695 NCBI chr12:49,980,488...50,014,006
Ensembl chr12:49,980,497...50,025,171
JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 5:92,935,688...93,061,406
Ensembl chr 5:92,935,694...93,061,405
JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chr13:66,526,508...66,897,125
Ensembl chr13:66,528,323...66,897,128
JBrowse link
G ATP2B3 ATPase plasma membrane Ca2+ transporting 3 ISO RGD PMID:19789383 RGD:7204695 NCBI chr  X:124,318,874...124,357,653
Ensembl chr  X:124,301,713...124,357,653
JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 9:64,336,354...64,445,669
Ensembl chr 9:64,336,499...64,445,663
JBrowse link
G ATP2C1 ATPase secretory pathway Ca2+ transporting 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chr13:1,461,562...1,580,035
Ensembl chr13:1,438,615...1,612,676
JBrowse link
G ATP2C2 ATPase secretory pathway Ca2+ transporting 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 6:4,237,331...4,313,273
Ensembl chr 6:4,237,440...4,313,247
JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A ISO RGD PMID:21746798 RGD:7204688 NCBI chr 2:65,491,784...65,871,068
Ensembl chr 2:65,514,509...65,871,182
JBrowse link
G CACNA1B calcium voltage-gated channel subunit alpha1 B ISO RGD PMID:21746798 RGD:7204688
G CACNA1C calcium voltage-gated channel subunit alpha1 C ISO RGD PMID:21746798 RGD:7204688 NCBI chr 5:69,016,954...69,448,428
Ensembl chr 5:69,275,176...69,448,430
JBrowse link
G CACNA1D calcium voltage-gated channel subunit alpha1 D ISO RGD PMID:21746798 RGD:7204688 NCBI chr13:35,568,534...35,911,483
Ensembl chr13:35,436,519...35,909,662
JBrowse link
G CACNA1E calcium voltage-gated channel subunit alpha1 E ISO RGD PMID:21746798 RGD:7204688 NCBI chr 9:122,827,386...123,318,372
Ensembl chr 9:123,006,195...123,315,319
JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F ISO RGD PMID:21746798 RGD:7204688 NCBI chr  X:43,250,449...43,284,458
Ensembl chr  X:43,251,370...43,283,990
JBrowse link
G CACNA1G calcium voltage-gated channel subunit alpha1 G ISO RGD PMID:21746798 RGD:7204688 NCBI chr12:26,838,633...26,912,344
Ensembl chr12:26,844,079...26,912,110
JBrowse link
G CACNA1H calcium voltage-gated channel subunit alpha1 H ISO RGD PMID:21746798 RGD:7204688 NCBI chr 3:40,637,420...40,694,616
Ensembl chr 3:40,637,427...40,695,177
JBrowse link
G CACNA1I calcium voltage-gated channel subunit alpha1 I ISO RGD PMID:21746798 RGD:7204688 NCBI chr 5:8,593,014...8,702,734
Ensembl chr 5:8,595,909...8,701,367
JBrowse link
G CACNA1S calcium voltage-gated channel subunit alpha1 S ISO RGD PMID:21746798 RGD:7204688 NCBI chr10:23,503,701...23,567,797
Ensembl chr10:23,502,898...23,568,058
JBrowse link
G CACNB1 calcium voltage-gated channel auxiliary subunit beta 1 ISO RGD PMID:21746798 RGD:7204688 NCBI chr12:23,038,185...23,060,504
Ensembl chr12:23,037,810...23,060,490
JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 ISO RGD PMID:21746798 RGD:7204688 NCBI chr10:44,321,954...44,887,410
Ensembl chr10:44,421,485...44,886,425
JBrowse link
G CACNB3 calcium voltage-gated channel auxiliary subunit beta 3 ISO RGD PMID:21746798 RGD:7204688 NCBI chr 5:14,875,524...14,888,224
Ensembl chr 5:14,874,465...14,888,223
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 ISO RGD PMID:21746798 RGD:7204688 NCBI chr15:402,801...455,691
Ensembl chr15:186,434...459,856
JBrowse link
G CNGA1 cyclic nucleotide gated channel subunit alpha 1 ISO RGD PMID:12087135 RGD:6893549 NCBI chr 8:37,896,460...37,968,935
Ensembl chr 8:37,896,459...37,969,344
JBrowse link
G CNGA2 cyclic nucleotide gated channel subunit alpha 2 ISO RGD PMID:12087135 RGD:6893549 NCBI chr  X:123,115,980...123,130,043
Ensembl chr  X:123,115,975...123,129,840
JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 ISO RGD PMID:12087135 RGD:6893549 NCBI chr 3:55,872,607...55,936,516
Ensembl chr 3:55,874,250...55,922,979
JBrowse link
G CNGA4 cyclic nucleotide gated channel subunit alpha 4 ISO RGD PMID:12087135 RGD:6893549 NCBI chr 9:3,430,995...3,438,411
Ensembl chr 9:3,431,340...3,442,426
JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 ISO RGD PMID:12087135 RGD:6893549 NCBI chr 6:19,752,734...19,865,830 JBrowse link
G CNGB3 cyclic nucleotide gated channel subunit beta 3 ISO RGD PMID:12087135 RGD:6893549 NCBI chr 4:50,112,927...50,263,264
Ensembl chr 4:50,112,927...50,263,222
JBrowse link
G ITPR1 inositol 1,4,5-trisphosphate receptor type 1 ISO RGD PMID:19133301 RGD:7204693 NCBI chr13:61,068,131...61,398,918
Ensembl chr13:61,068,126...61,398,912
JBrowse link
G ITPR2 inositol 1,4,5-trisphosphate receptor type 2 ISO RGD PMID:19133301 RGD:7204693 NCBI chr 5:46,935,923...47,465,681
Ensembl chr 5:46,935,932...47,464,125
JBrowse link
G ITPR3 inositol 1,4,5-trisphosphate receptor type 3 ISO RGD PMID:19133301 RGD:7204693 NCBI chr 7:29,835,922...29,901,305
Ensembl chr 7:29,835,922...29,901,309
JBrowse link
G MCOLN1 mucolipin TRP cation channel 1 ISO RGD PMID:20716668 RGD:7204689 NCBI chr 2:71,602,888...71,613,331
Ensembl chr 2:71,602,770...71,613,312
JBrowse link
G MCU mitochondrial calcium uniporter ISO RGD PMID:22850819 RGD:7204696 NCBI chr14:75,518,533...75,721,502
Ensembl chr14:75,678,393...75,721,500
JBrowse link
G ORAI1 ORAI calcium release-activated calcium modulator 1 ISO RGD PMID:22914293 RGD:7204692 NCBI chr14:31,012,212...31,028,008
Ensembl chr14:31,011,644...31,027,993
JBrowse link
G ORAI2 ORAI calcium release-activated calcium modulator 2 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 3:9,782,626...9,796,761
Ensembl chr 3:9,784,078...9,796,755
JBrowse link
G ORAI3 ORAI calcium release-activated calcium modulator 3 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 3:17,490,524...17,497,391
Ensembl chr 3:17,490,528...17,497,063
JBrowse link
G RYR1 ryanodine receptor 1 ISO RGD PMID:20961976 RGD:7204694 NCBI chr 6:47,339,759...47,458,457
Ensembl chr 6:47,343,768...47,458,458
JBrowse link
G RYR2 ryanodine receptor 2 ISO RGD PMID:20961976 RGD:7204694 NCBI chr14:53,652,140...54,406,691
Ensembl chr14:53,652,485...54,192,063
JBrowse link
G RYR3 ryanodine receptor 3 ISO RGD PMID:20961976 RGD:7204694 NCBI chr 7:80,640,030...81,208,576
Ensembl chr 7:80,640,123...81,208,491
JBrowse link
G SLC24A1 solute carrier family 24 member 1 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 1:163,603,223...163,662,071
Ensembl chr 1:163,604,594...163,658,318
JBrowse link
G SLC24A2 solute carrier family 24 member 2 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 1:203,059,563...203,336,442
Ensembl chr 1:203,059,588...203,333,781
JBrowse link
G SLC24A3 solute carrier family 24 member 3 ISO RGD PMID:17716241 RGD:7204698 NCBI chr17:27,270,232...27,780,535
Ensembl chr17:27,270,093...27,780,526
JBrowse link
G SLC24A4 solute carrier family 24 member 4 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 7:113,836,207...114,014,952
Ensembl chr 7:113,836,230...114,014,949
JBrowse link
G SLC24A5 solute carrier family 24 member 5 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 1:123,635,077...123,657,205
Ensembl chr 1:123,635,043...123,656,736
JBrowse link
G SLC8A1 solute carrier family 8 member A1 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 3:99,823,503...100,257,306
Ensembl chr 3:99,897,162...100,244,759
JBrowse link
G SLC8A2 solute carrier family 8 member A2 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 6:53,201,477...53,236,489
Ensembl chr 6:53,201,485...53,236,513
JBrowse link
G SLC8A3 solute carrier family 8 member A3 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 7:93,643,609...93,797,483
Ensembl chr 7:93,643,618...93,796,917
JBrowse link
G SLC8B1 solute carrier family 8 member B1 ISO RGD PMID:22850819 RGD:7204696 NCBI chr14:38,773,396...38,808,261
Ensembl chr14:38,773,407...38,808,265
JBrowse link
G STIM1 stromal interaction molecule 1 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 9:6,066,612...6,270,090
Ensembl chr 9:6,066,617...6,270,575
JBrowse link
G STIM2 stromal interaction molecule 2 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 8:20,456,343...20,609,283
Ensembl chr 8:20,517,587...20,604,319
JBrowse link
G TPCN1 two pore segment channel 1 ISO RGD PMID:20018950 RGD:7204697 NCBI chr14:38,698,680...38,773,189
Ensembl chr14:38,683,597...38,773,186
JBrowse link
G TPCN2 two pore segment channel 2 ISO RGD PMID:20018950 RGD:7204697 NCBI chr 2:4,069,267...4,105,065
Ensembl chr 2:4,069,280...4,105,042
JBrowse link
G TRPV5 transient receptor potential cation channel subfamily V member 5 ISO RGD PMID:20716668 RGD:7204689 NCBI chr18:7,285,186...7,341,965
Ensembl chr18:7,284,589...7,318,392
JBrowse link
calcium/calcium-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2A1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 3:18,545,064...18,568,312
Ensembl chr 3:18,545,071...18,568,310
JBrowse link
G ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chr14:31,674,659...31,744,981
Ensembl chr14:31,674,757...31,744,969
JBrowse link
G ATP2A3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 ISO RGD PMID:19789383 RGD:7204695 NCBI chr12:49,980,488...50,014,006
Ensembl chr12:49,980,497...50,025,171
JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 5:92,935,688...93,061,406
Ensembl chr 5:92,935,694...93,061,405
JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chr13:66,526,508...66,897,125
Ensembl chr13:66,528,323...66,897,128
JBrowse link
G ATP2B3 ATPase plasma membrane Ca2+ transporting 3 ISO RGD PMID:19789383 RGD:7204695 NCBI chr  X:124,318,874...124,357,653
Ensembl chr  X:124,301,713...124,357,653
JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 9:64,336,354...64,445,669
Ensembl chr 9:64,336,499...64,445,663
JBrowse link
G ATP2C1 ATPase secretory pathway Ca2+ transporting 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chr13:1,461,562...1,580,035
Ensembl chr13:1,438,615...1,612,676
JBrowse link
G ATP2C2 ATPase secretory pathway Ca2+ transporting 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 6:4,237,331...4,313,273
Ensembl chr 6:4,237,440...4,313,247
JBrowse link
G CABP1 calcium binding protein 1 ISO RGD PMID:20668007 RGD:7204681 NCBI chr14:40,563,302...40,587,975
Ensembl chr14:40,563,159...40,587,970
JBrowse link
G CABP2 calcium binding protein 2 ISO RGD PMID:20668007 RGD:7204681 NCBI chr 2:5,014,888...5,020,705
Ensembl chr 2:5,014,810...5,020,775
JBrowse link
G CABP4 calcium binding protein 4 ISO RGD PMID:20668007 RGD:7204681 NCBI chr 2:5,068,535...5,079,482
Ensembl chr 2:5,068,037...5,072,188
JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A ISO RGD PMID:21746798 RGD:7204688 NCBI chr 2:65,491,784...65,871,068
Ensembl chr 2:65,514,509...65,871,182
JBrowse link
G CACNA1B calcium voltage-gated channel subunit alpha1 B ISO RGD PMID:21746798 RGD:7204688
G CACNA1C calcium voltage-gated channel subunit alpha1 C ISO RGD PMID:21746798 RGD:7204688 NCBI chr 5:69,016,954...69,448,428
Ensembl chr 5:69,275,176...69,448,430
JBrowse link
G CACNA1D calcium voltage-gated channel subunit alpha1 D ISO RGD PMID:21746798 RGD:7204688 NCBI chr13:35,568,534...35,911,483
Ensembl chr13:35,436,519...35,909,662
JBrowse link
G CACNA1E calcium voltage-gated channel subunit alpha1 E ISO RGD PMID:21746798 RGD:7204688 NCBI chr 9:122,827,386...123,318,372
Ensembl chr 9:123,006,195...123,315,319
JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F ISO RGD PMID:21746798 RGD:7204688 NCBI chr  X:43,250,449...43,284,458
Ensembl chr  X:43,251,370...43,283,990
JBrowse link
G CACNA1G calcium voltage-gated channel subunit alpha1 G ISO RGD PMID:21746798 RGD:7204688 NCBI chr12:26,838,633...26,912,344
Ensembl chr12:26,844,079...26,912,110
JBrowse link
G CACNA1H calcium voltage-gated channel subunit alpha1 H ISO RGD PMID:21746798 RGD:7204688 NCBI chr 3:40,637,420...40,694,616
Ensembl chr 3:40,637,427...40,695,177
JBrowse link
G CACNA1I calcium voltage-gated channel subunit alpha1 I ISO RGD PMID:21746798 RGD:7204688 NCBI chr 5:8,593,014...8,702,734
Ensembl chr 5:8,595,909...8,701,367
JBrowse link
G CACNA1S calcium voltage-gated channel subunit alpha1 S ISO RGD PMID:21746798 RGD:7204688 NCBI chr10:23,503,701...23,567,797
Ensembl chr10:23,502,898...23,568,058
JBrowse link
G CACNB1 calcium voltage-gated channel auxiliary subunit beta 1 ISO RGD PMID:21746798 RGD:7204688 NCBI chr12:23,038,185...23,060,504
Ensembl chr12:23,037,810...23,060,490
JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 ISO RGD PMID:21746798 RGD:7204688 NCBI chr10:44,321,954...44,887,410
Ensembl chr10:44,421,485...44,886,425
JBrowse link
G CACNB3 calcium voltage-gated channel auxiliary subunit beta 3 ISO RGD PMID:21746798 RGD:7204688 NCBI chr 5:14,875,524...14,888,224
Ensembl chr 5:14,874,465...14,888,223
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 ISO RGD PMID:21746798 RGD:7204688 NCBI chr15:402,801...455,691
Ensembl chr15:186,434...459,856
JBrowse link
G CALB1 calbindin 1 ISO RGD PMID:20943758 RGD:7204685 NCBI chr 4:46,701,276...46,723,548
Ensembl chr 4:46,701,045...46,725,197
JBrowse link
G CALB2 calbindin 2 ISO RGD PMID:20943758 RGD:7204685 NCBI chr 6:14,392,220...14,420,663
Ensembl chr 6:14,391,857...14,420,663
JBrowse link
G CALM1 calmodulin 1 ISO RGD PMID:10884684 PMID:18083096 RGD:7204676 RGD:7204677 NCBI chr 7:112,160,823...112,171,754
Ensembl chr 7:112,160,806...112,171,744
JBrowse link
G CALM2 calmodulin 2 ISO RGD PMID:10884684 PMID:18083096 RGD:7204676 RGD:7204677 NCBI chr 3:93,371,765...93,386,378
Ensembl chr 3:93,372,045...93,386,218
JBrowse link
G CALM3 calmodulin 3 ISO RGD PMID:10884684 PMID:18083096 RGD:7204676 RGD:7204677 NCBI chr 6:52,506,979...52,516,704
Ensembl chr 6:52,506,674...52,516,703
JBrowse link
G CALR calreticulin ISO RGD PMID:20356453 RGD:7204686 NCBI chr 2:66,098,263...66,102,074
Ensembl chr 2:66,098,229...66,102,132
JBrowse link
G CASQ1 calsequestrin 1 ISO RGD PMID:20356453 RGD:7204686 NCBI chr 4:90,276,752...90,288,990
Ensembl chr 4:90,276,757...90,288,250
JBrowse link
G CASQ2 calsequestrin 2 ISO RGD PMID:20356453 RGD:7204686 NCBI chr 4:104,918,204...104,984,019
Ensembl chr 4:104,918,501...104,983,607
JBrowse link
G CNGA1 cyclic nucleotide gated channel subunit alpha 1 ISO RGD PMID:22435804 RGD:7204690 NCBI chr 8:37,896,460...37,968,935
Ensembl chr 8:37,896,459...37,969,344
JBrowse link
G CNGA2 cyclic nucleotide gated channel subunit alpha 2 ISO RGD PMID:22435804 RGD:7204690 NCBI chr  X:123,115,980...123,130,043
Ensembl chr  X:123,115,975...123,129,840
JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 ISO RGD PMID:22435804 RGD:7204690 NCBI chr 3:55,872,607...55,936,516
Ensembl chr 3:55,874,250...55,922,979
JBrowse link
G CNGA4 cyclic nucleotide gated channel subunit alpha 4 ISO RGD PMID:22435804 RGD:7204690 NCBI chr 9:3,430,995...3,438,411
Ensembl chr 9:3,431,340...3,442,426
JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 ISO RGD PMID:22435804 RGD:7204690 NCBI chr 6:19,752,734...19,865,830 JBrowse link
G CNGB3 cyclic nucleotide gated channel subunit beta 3 ISO RGD PMID:22435804 RGD:7204690 NCBI chr 4:50,112,927...50,263,264
Ensembl chr 4:50,112,927...50,263,222
JBrowse link
G GUCA1B guanylate cyclase activator 1B ISO RGD PMID:20668007 RGD:7204681 NCBI chr 7:37,297,901...37,311,158
Ensembl chr 7:37,297,908...37,310,170
JBrowse link
G GUCA2B guanylate cyclase activator 2B ISO RGD PMID:20668007 RGD:7204681 NCBI chr 6:169,152,172...169,154,557
Ensembl chr 6:169,152,179...169,154,551
JBrowse link
G ITPR1 inositol 1,4,5-trisphosphate receptor type 1 ISO RGD PMID:19133301 RGD:7204693 NCBI chr13:61,068,131...61,398,918
Ensembl chr13:61,068,126...61,398,912
JBrowse link
G ITPR2 inositol 1,4,5-trisphosphate receptor type 2 ISO RGD PMID:19133301 RGD:7204693 NCBI chr 5:46,935,923...47,465,681
Ensembl chr 5:46,935,932...47,464,125
JBrowse link
G ITPR3 inositol 1,4,5-trisphosphate receptor type 3 ISO RGD PMID:19133301 RGD:7204693 NCBI chr 7:29,835,922...29,901,305
Ensembl chr 7:29,835,922...29,901,309
JBrowse link
G KCNIP1 potassium voltage-gated channel interacting protein 1 ISO RGD PMID:20668007 RGD:7204681 NCBI chr16:53,272,652...53,694,974
Ensembl chr16:53,267,523...53,653,730
JBrowse link
G KCNIP2 potassium voltage-gated channel interacting protein 2 ISO RGD PMID:20668007 RGD:7204681 NCBI chr14:112,857,058...112,876,469
Ensembl chr14:112,857,062...112,876,439
JBrowse link
G KCNIP3 potassium voltage-gated channel interacting protein 3 ISO RGD PMID:20668007 RGD:7204681 NCBI chr 3:45,906,668...46,000,721
Ensembl chr 3:45,906,673...46,000,115
JBrowse link
G KCNIP4 potassium voltage-gated channel interacting protein 4 ISO RGD PMID:20668007 RGD:7204681 NCBI chr 8:15,211,916...16,346,358
Ensembl chr 8:15,211,917...16,346,786
JBrowse link
G KCNN1 potassium calcium-activated channel subfamily N member 1 ISO RGD PMID:21942705 RGD:7204683 NCBI chr 2:59,780,010...59,814,815
Ensembl chr 2:59,780,013...59,817,059
JBrowse link
G KCNN2 potassium calcium-activated channel subfamily N member 2 ISO RGD PMID:21942705 RGD:7204683 NCBI chr 2:118,439,328...118,882,299
Ensembl chr 2:118,439,403...118,882,295
JBrowse link
G KCNN3 potassium calcium-activated channel subfamily N member 3 ISO RGD PMID:21942705 RGD:7204683 NCBI chr 4:94,913,631...95,112,845
Ensembl chr 4:94,915,965...95,113,275
JBrowse link
G KCNN4 potassium calcium-activated channel subfamily N member 4 ISO RGD PMID:21942705 RGD:7204683 NCBI chr 6:50,580,016...50,593,518
Ensembl chr 6:50,580,022...50,593,544
JBrowse link
G MCOLN1 mucolipin TRP cation channel 1 ISO RGD PMID:20716668 RGD:7204689 NCBI chr 2:71,602,888...71,613,331
Ensembl chr 2:71,602,770...71,613,312
JBrowse link
G MCU mitochondrial calcium uniporter ISO RGD PMID:22850819 RGD:7204696 NCBI chr14:75,518,533...75,721,502
Ensembl chr14:75,678,393...75,721,500
JBrowse link
G NCS1 neuronal calcium sensor 1 ISO RGD PMID:20668007 RGD:7204681 NCBI chr 1:270,274,504...270,334,908
Ensembl chr 1:270,274,562...270,334,907
JBrowse link
G OCM oncomodulin ISO RGD PMID:20943758 RGD:7204685 NCBI chr 3:5,239,438...5,245,329 JBrowse link
G ORAI1 ORAI calcium release-activated calcium modulator 1 ISO RGD PMID:22914293 RGD:7204692 NCBI chr14:31,012,212...31,028,008
Ensembl chr14:31,011,644...31,027,993
JBrowse link
G ORAI2 ORAI calcium release-activated calcium modulator 2 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 3:9,782,626...9,796,761
Ensembl chr 3:9,784,078...9,796,755
JBrowse link
G ORAI3 ORAI calcium release-activated calcium modulator 3 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 3:17,490,524...17,497,391
Ensembl chr 3:17,490,528...17,497,063
JBrowse link
G PVALB parvalbumin ISO RGD PMID:20943758 RGD:7204685 NCBI chr 5:10,953,559...10,973,300
Ensembl chr 5:10,955,491...10,973,289
JBrowse link
G RCVRN recoverin ISO RGD PMID:20668007 RGD:7204681 NCBI chr12:54,740,642...54,752,291
Ensembl chr12:54,740,644...54,750,716
JBrowse link
G RYR1 ryanodine receptor 1 ISO RGD PMID:20961976 RGD:7204694 NCBI chr 6:47,339,759...47,458,457
Ensembl chr 6:47,343,768...47,458,458
JBrowse link
G RYR2 ryanodine receptor 2 ISO RGD PMID:20961976 RGD:7204694 NCBI chr14:53,652,140...54,406,691
Ensembl chr14:53,652,485...54,192,063
JBrowse link
G RYR3 ryanodine receptor 3 ISO RGD PMID:20961976 RGD:7204694 NCBI chr 7:80,640,030...81,208,576
Ensembl chr 7:80,640,123...81,208,491
JBrowse link
G S100A1 S100 calcium binding protein A1 ISO RGD PMID:16129693 PMID:17964289 RGD:1579960 RGD:7204682 NCBI chr 4:96,007,026...96,012,305
Ensembl chr 4:96,007,028...96,012,310
JBrowse link
G S100A4 S100 calcium binding protein A4 ISO RGD PMID:17964289 RGD:7204682 NCBI chr 4:96,088,102...96,091,160
Ensembl chr 4:96,088,201...96,091,156
JBrowse link
G S100B S100 calcium binding protein B ISO RGD PMID:17964289 RGD:7204682
G S100G S100 calcium binding protein G ISO RGD PMID:20943758 RGD:7204685 NCBI chr  X:13,107,611...13,114,213
Ensembl chr  X:13,107,402...13,114,213
JBrowse link
G SLC24A1 solute carrier family 24 member 1 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 1:163,603,223...163,662,071
Ensembl chr 1:163,604,594...163,658,318
JBrowse link
G SLC24A2 solute carrier family 24 member 2 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 1:203,059,563...203,336,442
Ensembl chr 1:203,059,588...203,333,781
JBrowse link
G SLC24A3 solute carrier family 24 member 3 ISO RGD PMID:17716241 RGD:7204698 NCBI chr17:27,270,232...27,780,535
Ensembl chr17:27,270,093...27,780,526
JBrowse link
G SLC24A4 solute carrier family 24 member 4 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 7:113,836,207...114,014,952
Ensembl chr 7:113,836,230...114,014,949
JBrowse link
G SLC24A5 solute carrier family 24 member 5 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 1:123,635,077...123,657,205
Ensembl chr 1:123,635,043...123,656,736
JBrowse link
G SLC8A1 solute carrier family 8 member A1 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 3:99,823,503...100,257,306
Ensembl chr 3:99,897,162...100,244,759
JBrowse link
G SLC8A2 solute carrier family 8 member A2 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 6:53,201,477...53,236,489
Ensembl chr 6:53,201,485...53,236,513
JBrowse link
G SLC8A3 solute carrier family 8 member A3 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 7:93,643,609...93,797,483
Ensembl chr 7:93,643,618...93,796,917
JBrowse link
G SLC8B1 solute carrier family 8 member B1 ISO RGD PMID:22850819 RGD:7204696 NCBI chr14:38,773,396...38,808,261
Ensembl chr14:38,773,407...38,808,265
JBrowse link
G STIM1 stromal interaction molecule 1 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 9:6,066,612...6,270,090
Ensembl chr 9:6,066,617...6,270,575
JBrowse link
G STIM2 stromal interaction molecule 2 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 8:20,456,343...20,609,283
Ensembl chr 8:20,517,587...20,604,319
JBrowse link
G SYT1 synaptotagmin 1 ISO RGD PMID:11751925 PMID:15534041 RGD:2311146 RGD:7204679 NCBI chr 5:101,871,313...102,394,310
Ensembl chr 5:101,871,314...102,215,581
JBrowse link
G SYT7 synaptotagmin 7 ISO RGD PMID:15534041 PMID:18713958 RGD:2311148 RGD:7204679 NCBI chr 2:9,947,962...10,012,713
Ensembl chr 2:9,947,925...10,012,496
JBrowse link
G SYT9 synaptotagmin 9 ISO RGD PMID:11751925 PMID:18713958 RGD:2311146 RGD:2311148 NCBI chr 9:2,191,757...2,395,157
Ensembl chr 9:2,191,765...2,391,921
JBrowse link
G TNNC1 troponin C1, slow skeletal and cardiac type ISO RGD PMID:17964289 RGD:7204682 NCBI chr13:34,591,571...34,594,320
Ensembl chr13:34,591,386...34,594,337
JBrowse link
G TNNC2 troponin C2, fast skeletal type ISO RGD PMID:17964289 RGD:7204682 NCBI chr17:48,025,621...48,026,762
Ensembl chr17:48,024,687...48,028,651
JBrowse link
G TPCN1 two pore segment channel 1 ISO RGD PMID:20018950 RGD:7204697 NCBI chr14:38,698,680...38,773,189
Ensembl chr14:38,683,597...38,773,186
JBrowse link
G TPCN2 two pore segment channel 2 ISO RGD PMID:20018950 RGD:7204697 NCBI chr 2:4,069,267...4,105,065
Ensembl chr 2:4,069,280...4,105,042
JBrowse link
G TRPV5 transient receptor potential cation channel subfamily V member 5 ISO RGD PMID:20716668 RGD:7204689 NCBI chr18:7,285,186...7,341,965
Ensembl chr18:7,284,589...7,318,392
JBrowse link
calcium/calmodulin dependent kinase 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALG3 ALG3 alpha-1,3- mannosyltransferase ISO RGD PMID:21070840 PMID:21301225 RGD:7240706 RGD:7240707 NCBI chr13:122,156,080...122,158,396
Ensembl chr13:122,156,041...122,158,367
JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C ISO RGD PMID:23091085 RGD:7240708 NCBI chr 5:69,016,954...69,448,428
Ensembl chr 5:69,275,176...69,448,430
JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 ISO RGD PMID:23091085 RGD:7240708 NCBI chr10:44,321,954...44,887,410
Ensembl chr10:44,421,485...44,886,425
JBrowse link
G CACNG2 calcium voltage-gated channel auxiliary subunit gamma 2 ISO RGD PMID:22334212 RGD:7240704 NCBI chr 5:11,067,016...11,185,480
Ensembl chr 5:11,067,692...11,185,480
JBrowse link
G CALM1 calmodulin 1 ISO RGD PMID:22717267 PMID:23091085 RGD:7240705 RGD:7240708 NCBI chr 7:112,160,823...112,171,754
Ensembl chr 7:112,160,806...112,171,744
JBrowse link
G CALM2 calmodulin 2 ISO RGD PMID:22717267 PMID:23091085 RGD:7240705 RGD:7240708 NCBI chr 3:93,371,765...93,386,378
Ensembl chr 3:93,372,045...93,386,218
JBrowse link
G CALM3 calmodulin 3 ISO RGD PMID:22717267 PMID:23091085 RGD:7240705 RGD:7240708 NCBI chr 6:52,506,979...52,516,704
Ensembl chr 6:52,506,674...52,516,703
JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha ISO RGD PMID:22334212 PMID:22717267 RGD:7240704 RGD:7240705 NCBI chr 2:151,248,356...151,353,907
Ensembl chr 2:151,248,358...151,308,706
JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta ISO RGD PMID:22334212 PMID:22717267 RGD:7240704 RGD:7240705 NCBI chr18:50,862,225...50,956,263
Ensembl chr18:50,861,466...50,956,225
JBrowse link
G CAMK2D calcium/calmodulin dependent protein kinase II delta ISO RGD PMID:22717267 PMID:23091085 RGD:7240705 RGD:7240708 NCBI chr 8:108,916,019...109,221,317
Ensembl chr 8:108,915,572...109,222,905
JBrowse link
G CAMK2G calcium/calmodulin dependent protein kinase II gamma ISO RGD PMID:22717267 RGD:7240705 NCBI chr14:76,535,095...76,632,381
Ensembl chr14:76,535,096...76,593,108
JBrowse link
G CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 ISO RGD PMID:21070840 PMID:21301225 RGD:7240706 RGD:7240707 NCBI chr 6:78,730,204...78,734,232
Ensembl chr 6:78,730,206...78,733,740
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 ISO RGD PMID:22717267 RGD:7240705 NCBI chr13:132,819,931...133,084,880
Ensembl chr13:132,820,870...133,086,841
JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 ISO RGD PMID:22334212 RGD:7240704 NCBI chr16:69,332,786...69,654,366
Ensembl chr16:69,332,587...69,655,380
JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 ISO RGD PMID:22717267 RGD:7240705
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A ISO RGD PMID:22717267 RGD:7240705 NCBI chr 3:32,749,329...33,149,350
Ensembl chr 3:32,750,700...33,143,499
JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B ISO RGD PMID:22334212 PMID:22717267 RGD:7240704 RGD:7240705 NCBI chr 5:58,477,862...58,948,735
Ensembl chr 5:58,480,528...58,927,558
JBrowse link
G HDAC4 histone deacetylase 4 ISO RGD PMID:21255680 RGD:7241019 NCBI chr15:138,378,237...138,657,266
Ensembl chr15:138,381,635...138,614,301
JBrowse link
G HDAC5 histone deacetylase 5 ISO RGD PMID:21255680 RGD:7241019 NCBI chr12:19,077,910...19,119,463
Ensembl chr12:19,078,005...19,121,154
JBrowse link
G LRRC7 leucine rich repeat containing 7 ISO RGD PMID:22717267 RGD:7240705 NCBI chr 6:142,735,676...143,273,992
Ensembl chr 6:142,735,890...143,274,231
JBrowse link
G PLN phospholamban ISO RGD PMID:23091085 RGD:7240708 NCBI chr 1:43,449,354...43,458,925
Ensembl chr 1:43,449,354...43,458,925
JBrowse link
G PPM1E protein phosphatase, Mg2+/Mn2+ dependent 1E ISO RGD PMID:18454172 RGD:7241020 NCBI chr12:35,051,936...35,262,698
Ensembl chr12:35,051,952...35,262,703
JBrowse link
G PPM1F protein phosphatase, Mg2+/Mn2+ dependent 1F ISO RGD PMID:18454172 RGD:7241020 NCBI chr14:50,040,612...50,083,047
Ensembl chr14:50,040,663...50,063,325
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma ISO RGD PMID:18454172 RGD:7241020 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,545...32,091,499
JBrowse link
G PPP2CA protein phosphatase 2 catalytic subunit alpha ISO RGD PMID:18454172 RGD:7241020 NCBI chr 2:136,497,780...136,522,630
Ensembl chr 2:136,494,541...136,522,646
JBrowse link
G RYR2 ryanodine receptor 2 ISO RGD PMID:23091085 RGD:7240708 NCBI chr14:53,652,140...54,406,691
Ensembl chr14:53,652,485...54,192,063
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 ISO RGD PMID:23091085 RGD:7240708 NCBI chr13:23,336,143...23,424,755
Ensembl chr13:23,336,153...23,424,755
JBrowse link
G SYNGAP1 synaptic Ras GTPase activating protein 1 ISO RGD PMID:22717267 RGD:7240705 NCBI chr 7:29,723,745...29,752,351
Ensembl chr 7:29,723,588...29,753,933
JBrowse link
calcium/calmodulin dependent kinase signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDNRB endothelin receptor type B ISO RGD PMID:15245872 RGD:1581866 NCBI chr11:50,073,300...50,102,879
Ensembl chr11:50,072,554...50,102,884
JBrowse link
carrier pathway of mitochondrial protein import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TIMM10 translocase of inner mitochondrial membrane 10 ISO RGD PMID:14726512 RGD:10412667 NCBI chr 2:13,393,225...13,396,241
Ensembl chr 2:13,393,282...13,396,439
JBrowse link
G TIMM10B translocase of inner mitochondrial membrane 10B ISO RGD PMID:14726512 RGD:10412667 NCBI chr 9:3,248,474...3,249,975
Ensembl chr 9:3,248,159...3,250,050
JBrowse link
G TIMM22 translocase of inner mitochondrial membrane 22 ISO RGD PMID:14726512 RGD:10412667 NCBI chr12:46,897,580...46,903,210
Ensembl chr12:46,897,586...46,903,005
JBrowse link
G TIMM9 translocase of inner mitochondrial membrane 9 ISO RGD PMID:14726512 RGD:10412667 NCBI chr 1:187,485,407...187,504,452 JBrowse link
G TOMM20 translocase of outer mitochondrial membrane 20 ISO RGD PMID:25980382 RGD:10412661 NCBI chr14:56,113,087...56,127,686
Ensembl chr14:56,113,192...56,127,677
JBrowse link
G TOMM22 translocase of outer mitochondrial membrane 22 ISO RGD PMID:25980382 RGD:10412661 NCBI chr 5:9,336,114...9,339,867
Ensembl chr 5:9,336,130...9,350,015
JBrowse link
G TOMM40 translocase of outer mitochondrial membrane 40 ISO RGD PMID:25980382 RGD:10412661 NCBI chr 6:51,359,948...51,369,932
Ensembl chr 6:51,359,595...51,369,908
JBrowse link
G TOMM5 translocase of outer mitochondrial membrane 5 ISO RGD PMID:25980382 RGD:10412661 NCBI chr 1:238,328,894...238,333,066 JBrowse link
G TOMM6 translocase of outer mitochondrial membrane 6 ISO RGD PMID:25980382 RGD:10412661 NCBI chr 7:36,976,478...36,976,878
Ensembl chr 7:36,969,909...36,978,283
JBrowse link
G TOMM7 translocase of outer mitochondrial membrane 7 ISO RGD PMID:25980382 RGD:10412661 NCBI chr 9:91,570,069...91,578,991
Ensembl chr 9:91,570,065...91,579,015
JBrowse link
G TOMM70 translocase of outer mitochondrial membrane 70 ISO RGD PMID:25980382 RGD:10412661 NCBI chr13:158,577,026...158,629,878
Ensembl chr13:158,577,379...158,628,262
JBrowse link
citric acid cycle pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACO2 aconitase 2 ISO RGD
SMPDB
PMID:9712727 RGD:2306877 SMP:00057 NCBI chr 5:7,014,383...7,071,023
Ensembl chr 5:7,008,719...7,071,025
JBrowse link
G CS citrate synthase ISO SMPDB
RGD
PMID:938457 PMID:9712727 RGD:2306828 RGD:2306877 SMP:00057 NCBI chr 5:21,669,778...21,700,737
Ensembl chr 5:21,666,585...21,700,711
JBrowse link
G DLAT dihydrolipoamide S-acetyltransferase ISO SMPDB SMP:00057 NCBI chr 9:39,738,639...39,763,813
Ensembl chr 9:39,738,564...39,796,806
JBrowse link
G DLD dihydrolipoamide dehydrogenase ISO SMPDB
RGD
PMID:10672230 RGD:2306878 SMP:00057 NCBI chr 9:107,642,129...107,668,443
Ensembl chr 9:107,642,095...107,673,583
JBrowse link
G DLST dihydrolipoamide S-succinyltransferase ISO SMPDB
RGD
PMID:10672230 RGD:2306878 SMP:00057 NCBI chr 7:98,091,161...98,111,267
Ensembl chr 7:98,091,124...98,111,572
JBrowse link
G FH fumarate hydratase ISO RGD
SMPDB
PMID:938457 RGD:2306828 SMP:00057 NCBI chr10:12,404,143...12,431,843
Ensembl chr10:12,404,176...12,431,824
JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ISO SMPDB
RGD
PMID:938457 RGD:2306828 SMP:00057 NCBI chr 7:47,759,436...47,778,948
Ensembl chr 7:47,759,439...47,778,956
JBrowse link
G IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta ISO SMPDB
RGD
PMID:938457 RGD:2306828 SMP:00057 NCBI chr17:32,955,061...32,960,110
Ensembl chr17:32,955,101...32,960,104
JBrowse link
G IDH3G isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ISO SMPDB
RGD
PMID:938457 RGD:2306828 SMP:00057 NCBI chr  X:124,528,643...124,537,570
Ensembl chr  X:124,528,585...124,537,575
JBrowse link
G MDH2 malate dehydrogenase 2 ISO RGD
SMPDB
PMID:938457 RGD:2306828 SMP:00057 NCBI chr 3:10,120,121...10,132,705
Ensembl chr 3:10,120,083...10,132,752
JBrowse link
G MPC1 mitochondrial pyruvate carrier 1 ISO SMPDB SMP:00057 NCBI chr 1:2,541,475...2,552,864 JBrowse link
G OGDH oxoglutarate dehydrogenase ISO RGD
SMPDB
PMID:9712727 PMID:10672230 RGD:2306877 RGD:2306878 SMP:00057 NCBI chr18:50,609,415...50,684,990
Ensembl chr18:50,609,418...50,684,964
JBrowse link
G PC pyruvate carboxylase ISO SMPDB SMP:00057 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,517...5,587,797
JBrowse link
G PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 ISO SMPDB SMP:00057 NCBI chr  X:15,699,924...15,718,908
Ensembl chr  X:15,700,050...15,718,903
JBrowse link
G PDHB pyruvate dehydrogenase E1 subunit beta ISO SMPDB SMP:00057 NCBI chr13:40,161,519...40,167,502
Ensembl chr13:40,160,568...40,167,476
JBrowse link
G SDHA succinate dehydrogenase complex flavoprotein subunit A ISO SMPDB
RGD
PMID:16143825 RGD:2306881 SMP:00057 NCBI chr16:79,838,442...79,862,956
Ensembl chr16:79,834,044...79,862,524
JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B ISO SMPDB
RGD
PMID:16143825 RGD:2306881 SMP:00057 NCBI chr 6:75,648,362...75,678,111
Ensembl chr 6:75,648,215...75,678,378
JBrowse link
G SDHC succinate dehydrogenase complex subunit C ISO SMPDB
RGD
PMID:16143825 RGD:2306881 SMP:00057 NCBI chr 4:89,135,410...89,169,164
Ensembl chr 4:89,130,379...89,169,118
JBrowse link
G SDHD succinate dehydrogenase complex subunit D ISO SMPDB
RGD
PMID:16143825 RGD:2306881 SMP:00057 NCBI chr 9:39,790,654...39,803,602
Ensembl chr 9:39,790,595...39,803,950
JBrowse link
G SUCLA2 succinate-CoA ligase ADP-forming subunit beta ISO RGD PMID:17403370 RGD:2306915 NCBI chr11:19,616,415...19,670,667
Ensembl chr11:19,616,495...19,670,662
JBrowse link
G SUCLG1 succinate-CoA ligase GDP/ADP-forming subunit alpha ISO RGD
SMPDB
PMID:17403370 RGD:2306915 SMP:00057 NCBI chr 3:60,142,340...60,177,497
Ensembl chr 3:60,142,435...60,177,378
JBrowse link
G SUCLG2 succinate-CoA ligase GDP-forming subunit beta ISO RGD
SMPDB
PMID:17403370 RGD:2306915 SMP:00057 NCBI chr13:48,650,851...49,090,521
Ensembl chr13:48,823,733...49,090,468
JBrowse link
coagulation cascade pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOH apolipoprotein H ISO RGD PMID:15507263 RGD:1578489 NCBI chr12:12,827,195...12,839,172
Ensembl chr12:12,827,201...12,839,175
JBrowse link
G F10 coagulation factor X ISO RGD PMID:10048754 PMID:12356487 PMID:12787532 PMID:26018600 RGD:11342779 RGD:11352277 RGD:1580376 RGD:2290183 NCBI chr11:78,521,760...78,538,256
Ensembl chr11:78,521,598...78,538,258
JBrowse link
G F11 coagulation factor XI ISO RGD PMID:10048754 PMID:12787532 PMID:26018600 RGD:11342779 RGD:11352277 RGD:2290183 NCBI chr17:9,045,990...9,073,552
Ensembl chr17:9,046,002...9,073,520
JBrowse link
G F12 coagulation factor XII ISO RGD PMID:10048754 PMID:12787532 PMID:26018600 RGD:11342779 RGD:11352277 RGD:2290183 NCBI chr 2:80,527,451...80,544,835
Ensembl chr 2:80,527,446...80,544,828
JBrowse link
G F13A1 coagulation factor XIII A chain ISO RGD PMID:16102057 RGD:11352259 NCBI chr 7:3,751,290...3,900,797
Ensembl chr 7:3,751,292...3,900,762
JBrowse link
G F13B coagulation factor XIII B chain ISO RGD PMID:16102057 RGD:11352259
G F2 coagulation factor II, thrombin ISO RGD PMID:10048754 PMID:12787532 PMID:15975137 PMID:26018600 RGD:11342779 RGD:11352277 RGD:1578509 RGD:2290183 NCBI chr 2:15,793,257...15,819,151
Ensembl chr 2:15,791,455...15,819,137
JBrowse link
G F3 coagulation factor III, tissue factor ISO RGD PMID:12787532 PMID:26018600 RGD:11342779 RGD:11352277 NCBI chr 4:122,827,018...122,837,673
Ensembl chr 4:122,826,644...122,837,666
JBrowse link
G F5 coagulation factor V ISO RGD PMID:10048754 PMID:12787532 PMID:15147718 PMID:26018600 RGD:11342779 RGD:11352277 RGD:1580372 RGD:2290183 NCBI chr 4:81,403,273...81,484,908
Ensembl chr 4:81,403,274...81,485,066
JBrowse link
G F7 coagulation factor VII ISO RGD PMID:10048754 PMID:12356487 PMID:12787532 PMID:26018600 RGD:11342779 RGD:11352277 RGD:1580376 RGD:2290183 NCBI chr11:78,512,389...78,518,668
Ensembl chr11:78,512,137...78,518,668
JBrowse link
G F8 coagulation factor VIII ISO RGD PMID:2513867 PMID:7721754 PMID:10048754 PMID:12787532 PMID:26018600 RGD:11342779 RGD:11352277 RGD:1582368 RGD:1582371 RGD:2290183 NCBI chr  X:125,265,330...125,350,853
Ensembl chr  X:125,229,450...125,350,853
JBrowse link
G F9 coagulation factor IX ISO RGD PMID:10048754 PMID:12356487 PMID:12787532 PMID:26018600 RGD:11342779 RGD:11352277 RGD:1580376 RGD:2290183 NCBI chr  X:114,218,704...114,250,436
Ensembl chr  X:114,218,707...114,250,429
JBrowse link
G FGA fibrinogen alpha chain ISO RGD PMID:16102057 RGD:11352259 NCBI chr 8:74,574,870...74,584,202
Ensembl chr 8:74,574,882...74,584,202
JBrowse link
G FGB fibrinogen beta chain ISO RGD PMID:16102057 RGD:11352259 NCBI chr 8:74,598,170...74,607,409
Ensembl chr 8:74,595,688...74,607,409
JBrowse link
G FGG fibrinogen gamma chain ISO RGD PMID:16102057 RGD:11352259 NCBI chr 8:74,553,040...74,562,151
Ensembl chr 8:74,553,105...74,563,688
JBrowse link
G PROC protein C, inactivator of coagulation factors Va and VIIIa ISO RGD PMID:12787532 RGD:11352277 NCBI chr15:25,043,543...25,054,310
Ensembl chr15:25,043,545...25,056,595
JBrowse link
G SERPINC1 serpin family C member 1 ISO RGD PMID:12787532 RGD:11352277 NCBI chr 9:116,181,988...116,193,100
Ensembl chr 9:116,181,670...116,193,201
JBrowse link
G SERPING1 serpin family G member 1 ISO RGD PMID:12787532 PMID:26018600 RGD:11342779 RGD:11352277 NCBI chr 2:13,324,160...13,338,826
Ensembl chr 2:13,324,158...13,338,663
JBrowse link
G TFPI tissue factor pathway inhibitor ISO RGD PMID:12787532 PMID:26018600 RGD:11342779 RGD:11352277 NCBI chr15:92,345,083...92,409,962
Ensembl chr15:92,345,075...92,409,905
JBrowse link
cytosolic iron-sulfur cluster protein assembly pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIAO1 cytosolic iron-sulfur assembly component 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 3:46,960,880...46,967,003
Ensembl chr 3:46,960,881...46,966,635
JBrowse link
G CIAO2A cytosolic iron-sulfur assembly component 2A ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 1:107,951,618...107,969,306
Ensembl chr 1:107,951,646...107,969,298
JBrowse link
G CIAO2B cytosolic iron-sulfur assembly component 2B ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 6:27,610,469...27,612,617
Ensembl chr 6:27,610,470...27,612,592
JBrowse link
G CIAO3 cytosolic iron-sulfur assembly component 3 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 3:41,042,672...41,050,013
Ensembl chr 3:41,042,702...41,050,012
JBrowse link
G CIAPIN1 cytokine induced apoptosis inhibitor 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 6:19,356,065...19,373,085
Ensembl chr 6:19,356,069...19,373,060
JBrowse link
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr14:108,853,038...108,886,587
Ensembl chr14:108,853,025...108,886,579
JBrowse link
G NDOR1 NADPH dependent diflavin oxidoreductase 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192
G NUBP1 NUBP iron-sulfur cluster assembly factor 1, cytosolic ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 3:32,311,774...32,340,120
Ensembl chr 3:32,311,779...32,340,034
JBrowse link
G NUBP2 NUBP iron-sulfur cluster assembly factor 2, cytosolic ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 3:40,178,417...40,184,646
Ensembl chr 3:40,178,417...40,186,551
JBrowse link
DNA modification pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXXC1 CXXC finger protein 1 ISO RGD PMID:23697932 RGD:9479164 NCBI chr 1:99,934,493...99,940,125
Ensembl chr 1:99,934,497...99,940,130
JBrowse link
G DNMT1 DNA methyltransferase 1 ISO RGD PMID:22770212 PMID:24825349 RGD:8695943 RGD:8695944 NCBI chr 2:68,981,564...69,040,364
Ensembl chr 2:68,981,566...69,029,844
JBrowse link
G DNMT3A DNA methyltransferase 3 alpha ISO RGD PMID:22770212 PMID:24825349 RGD:8695943 RGD:8695944 NCBI chr 3:113,501,972...113,609,148
Ensembl chr 3:113,528,926...113,603,087
JBrowse link
G DNMT3B DNA methyltransferase 3 beta ISO RGD PMID:22770212 PMID:24825349 RGD:8695943 RGD:8695944 NCBI chr17:36,345,715...36,386,076
Ensembl chr17:36,345,816...36,386,072
JBrowse link
G EBF1 EBF transcription factor 1 ISO RGD PMID:24825349 RGD:8695944 NCBI chr16:64,357,999...64,753,188
Ensembl chr16:64,359,001...64,752,210
JBrowse link
G KDM2A lysine demethylase 2A ISO RGD PMID:23697932 RGD:9479164 NCBI chr 2:5,238,690...5,357,799
Ensembl chr 2:5,240,312...5,357,829
JBrowse link
G KDM2B lysine demethylase 2B ISO RGD PMID:23697932 RGD:9479164 NCBI chr14:31,057,121...31,203,093
Ensembl chr14:31,165,950...31,203,091
JBrowse link
G KMT2A lysine methyltransferase 2A ISO RGD PMID:23697932 RGD:9479164 NCBI chr 9:45,743,566...45,828,559
Ensembl chr 9:45,743,397...45,824,884
JBrowse link
G KMT2C lysine methyltransferase 2C ISO RGD PMID:23697932 RGD:9479164 NCBI chr18:4,993,213...5,279,668
Ensembl chr18:4,993,227...5,278,723
JBrowse link
G MBD1 methyl-CpG binding domain protein 1 ISO RGD PMID:23324617 RGD:8695954 NCBI chr 1:99,848,193...99,917,347
Ensembl chr 1:99,900,801...99,917,323
JBrowse link
G MBD2 methyl-CpG binding domain protein 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chr 1:103,683,077...103,768,372
Ensembl chr 1:103,735,192...103,752,402
JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase ISO RGD PMID:23324617 RGD:8695954 NCBI chr13:68,816,677...68,828,559
Ensembl chr13:68,816,679...68,828,580
JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chr  X:124,735,523...124,789,063
Ensembl chr  X:124,735,656...124,738,659
JBrowse link
G NANOG Nanog homeobox ISO RGD PMID:24825349 RGD:8695944 NCBI chr 5:62,931,642...62,939,086
Ensembl chr 5:62,932,382...62,939,082
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:24825349 RGD:8695944 NCBI chr  X:57,521,091...57,558,467
Ensembl chr  X:57,521,098...57,558,515
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO RGD PMID:24825349 RGD:8695944 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,322...68,433,944
JBrowse link
G PRDM14 PR/SET domain 14 ISO RGD PMID:24825349 RGD:8695944 NCBI chr 4:65,273,988...65,295,362
Ensembl chr 4:65,271,315...65,295,178
JBrowse link
G SIN3A SIN3 transcription regulator family member A ISO RGD PMID:24825349 RGD:8695944 NCBI chr 7:58,171,821...58,246,126
Ensembl chr 7:58,176,167...58,245,971
JBrowse link
G SPI1 Spi-1 proto-oncogene ISO RGD PMID:24825349 RGD:8695944 NCBI chr 2:15,227,850...15,245,679
Ensembl chr 2:15,227,881...15,245,677
JBrowse link
G TET1 tet methylcytosine dioxygenase 1 ISO RGD PMID:22770212 PMID:24825349 RGD:8695943 RGD:8695944 NCBI chr14:71,675,671...71,812,732
Ensembl chr14:71,675,671...71,815,618
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 ISO RGD PMID:22770212 PMID:24825349 RGD:8695943 RGD:8695944 NCBI chr 8:116,413,253...116,546,976
Ensembl chr 8:116,415,267...116,545,299
JBrowse link
G TET3 tet methylcytosine dioxygenase 3 ISO RGD PMID:22770212 PMID:23697932 PMID:24825349 RGD:8695943 RGD:8695944 RGD:9479164 NCBI chr 3:68,918,896...69,020,406
Ensembl chr 3:68,918,933...69,020,986
JBrowse link
G UHRF1 ubiquitin like with PHD and ring finger domains 1 ISO RGD PMID:23324617 RGD:8695954 NCBI chr 2:73,898,061...73,937,727
Ensembl chr 2:73,898,071...73,931,769
JBrowse link
G UHRF2 ubiquitin like with PHD and ring finger domains 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chr 1:215,730,212...215,807,630
Ensembl chr 1:215,730,225...215,807,627
JBrowse link
G ZBTB33 zinc finger and BTB domain containing 33 ISO RGD PMID:23324617 RGD:8695954 NCBI chr  X:98,370,137...98,413,686
Ensembl chr  X:98,405,319...98,414,279
JBrowse link
G ZBTB38 zinc finger and BTB domain containing 38 ISO RGD PMID:23324617 RGD:8695954 NCBI chr13:82,053,887...82,195,321
Ensembl chr13:82,064,565...82,195,319
JBrowse link
G ZBTB4 zinc finger and BTB domain containing 4 ISO RGD PMID:23324617 RGD:8695954 NCBI chr12:52,759,912...52,775,725 JBrowse link
G ZFP57 ZFP57 zinc finger protein ISO RGD PMID:23324617 RGD:8695954 NCBI chr 7:22,607,420...22,612,064
Ensembl chr 7:22,605,125...22,612,064
JBrowse link
electron transport chain pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5F1A ATP synthase F1 subunit alpha ISO SMPDB SMP:00355 NCBI chr 1:95,738,789...95,750,835
Ensembl chr 1:95,733,090...95,750,841
JBrowse link
G ATP5F1B ATP synthase F1 subunit beta ISO SMPDB SMP:00355 NCBI chr 5:21,984,750...21,992,393
Ensembl chr 5:21,984,580...21,992,407
JBrowse link
G ATP5F1C ATP synthase F1 subunit gamma ISO SMPDB SMP:00355 NCBI chr10:63,584,288...63,599,537
Ensembl chr10:63,583,695...63,599,453
JBrowse link
G ATP5F1D ATP synthase F1 subunit delta ISO SMPDB SMP:00355 NCBI chr 2:77,216,430...77,219,301
Ensembl chr 2:77,216,436...77,222,632
JBrowse link
G ATP5F1E ATP synthase F1 subunit epsilon ISO SMPDB SMP:00355 NCBI chr17:59,163,085...59,174,488 JBrowse link
G ATP5MC2 ATP synthase membrane subunit c locus 2 ISO SMPDB SMP:00355 NCBI chr 5:18,871,025...18,879,933
Ensembl chr 5:18,871,026...18,879,609
JBrowse link
G ATP5PB ATP synthase peripheral stalk-membrane subunit b ISO SMPDB SMP:00355 NCBI chr 4:108,896,063...108,907,626
Ensembl chr 4:108,896,057...108,907,805
JBrowse link
G CYCS cytochrome c, somatic ISO SMPDB SMP:00355 NCBI chr18:47,169,921...47,172,212
Ensembl chr18:47,169,866...47,173,866
JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase ISO SMPDB SMP:00355 NCBI chr 5:64,129,678...64,135,194
Ensembl chr 5:64,129,679...64,133,991
JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 ISO SMPDB SMP:00355 NCBI chr 5:16,008,179...16,021,676
Ensembl chr 5:16,007,448...16,017,825
JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 ISO SMPDB SMP:00355 NCBI chr15:63,592,723...63,728,636
Ensembl chr15:63,619,762...63,728,633
JBrowse link
G MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 ISO SMPDB SMP:00355 NCBI chr MT:9,120...9,800
Ensembl chr MT:9,120...9,800
JBrowse link
G MT-CO1 mitochondrially encoded cytochrome c oxidase I ISO SMPDB SMP:00355 NCBI chr MT:6,511...8,055
Ensembl chr MT:6,511...8,055
JBrowse link
G NDUFA1 NADH:ubiquinone oxidoreductase subunit A1 ISO SMPDB SMP:00355 NCBI chr  X:98,219,717...98,223,873
Ensembl chr  X:98,219,988...98,223,868
JBrowse link
G SDHA succinate dehydrogenase complex flavoprotein subunit A ISO SMPDB
RGD
PMID:16143825 RGD:2306881 SMP:00355 NCBI chr16:79,838,442...79,862,956
Ensembl chr16:79,834,044...79,862,524
JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B ISO SMPDB
RGD
PMID:16143825 RGD:2306881 SMP:00355 NCBI chr 6:75,648,362...75,678,111
Ensembl chr 6:75,648,215...75,678,378
JBrowse link
G SDHC succinate dehydrogenase complex subunit C ISO SMPDB
RGD
PMID:16143825 RGD:2306881 SMP:00355 NCBI chr 4:89,135,410...89,169,164
Ensembl chr 4:89,130,379...89,169,118
JBrowse link
G SDHD succinate dehydrogenase complex subunit D ISO SMPDB
RGD
PMID:15572694 PMID:16143825 RGD:1580035 RGD:2306881 SMP:00355 NCBI chr 9:39,790,654...39,803,602
Ensembl chr 9:39,790,595...39,803,950
JBrowse link
G SLC25A4 solute carrier family 25 member 4 ISO SMPDB SMP:00355 NCBI chr15:46,193,498...46,197,989
Ensembl chr15:46,193,746...46,200,987
JBrowse link
G SLC37A4 solute carrier family 37 member 4 ISO SMPDB SMP:00355 NCBI chr 9:46,247,278...46,254,068
Ensembl chr 9:46,247,284...46,254,031
JBrowse link
G UQCRC1 ubiquinol-cytochrome c reductase core protein 1 ISO SMPDB SMP:00355 NCBI chr13:31,298,449...31,308,719
Ensembl chr13:31,298,449...31,309,516
JBrowse link
energy homeostasis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEP leptin ISO RGD PMID:12058043 PMID:12079865 PMID:17010638 RGD:1357909 RGD:1625125 RGD:625499 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,323
JBrowse link
G LEPR leptin receptor ISO RGD PMID:11102451 PMID:12079865 PMID:17010638 RGD:1357909 RGD:1625125 RGD:61790 NCBI chr 6:146,802,297...146,896,152
Ensembl chr 6:146,801,954...146,895,995
JBrowse link
epinephrine signaling pathway via adrenergic receptor beta term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:19110970 RGD:4140391 NCBI chr14:124,400,330...124,401,739
Ensembl chr14:124,400,330...124,401,739
JBrowse link
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:19110970 RGD:4140391 NCBI chr 2:150,032,649...150,035,591
Ensembl chr 2:150,033,579...150,040,731
JBrowse link
G ARRB1 arrestin beta 1 ISO RGD PMID:18268361 PMID:19229505 RGD:4140419 RGD:5135529 NCBI chr 9:9,516,944...9,597,446
Ensembl chr 9:9,516,947...9,597,976
JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:18268361 PMID:19229505 RGD:4140419 RGD:5135529 NCBI chr12:52,161,776...52,170,362
Ensembl chr12:52,161,778...52,170,342
JBrowse link
G GNAS GNAS complex locus ISO RGD PMID:19110970 RGD:4140391 NCBI chr17:58,985,580...59,053,022
Ensembl chr17:58,998,981...59,053,021
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 ISO RGD PMID:19110970 PMID:19229505 RGD:4140391 RGD:5135529 NCBI chr 2:5,209,435...5,227,543
Ensembl chr 2:5,209,439...5,227,758
JBrowse link
G GRK5 G protein-coupled receptor kinase 5 ISO RGD PMID:19110970 PMID:19229505 RGD:4140391 RGD:5135529 NCBI chr14:129,113,933...129,351,135
Ensembl chr14:129,113,603...129,347,152
JBrowse link
G SNX13 sorting nexin 13 ISO RGD PMID:17173929 RGD:4140388 NCBI chr 9:86,964,038...87,087,200
Ensembl chr 9:86,964,045...87,086,577
JBrowse link
facilitative sugar transporter mediated glucose transport pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC2A1 solute carrier family 2 member 1 ISO RGD PMID:15449578 PMID:15466941 RGD:1625539 RGD:1626159 NCBI chr 6:168,535,398...168,561,170
Ensembl chr 6:168,535,440...168,560,867
JBrowse link
G SLC2A2 solute carrier family 2 member 2 ISO RGD PMID:15449578 RGD:1626159 NCBI chr13:109,592,595...109,614,105
Ensembl chr13:109,587,258...109,638,510
JBrowse link
G SLC2A3 solute carrier family 2 member 3 ISO RGD PMID:15320870 PMID:15449578 PMID:15466941 RGD:1625539 RGD:1626159 RGD:1642813 NCBI chr 5:62,963,635...63,041,955 JBrowse link
G SLC2A4 solute carrier family 2 member 4 ISO RGD PMID:15449578 PMID:15466941 RGD:1625539 RGD:1626159 NCBI chr12:52,628,746...52,634,965
Ensembl chr12:52,628,450...52,634,967
JBrowse link
fibrinolysis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPB2 carboxypeptidase B2 ISO RGD PMID:26149056 RGD:11352249 NCBI chr11:21,234,447...21,298,250
Ensembl chr11:21,234,447...21,298,241
JBrowse link
G FGA fibrinogen alpha chain ISO RGD PMID:26149056 RGD:11352249 NCBI chr 8:74,574,870...74,584,202
Ensembl chr 8:74,574,882...74,584,202
JBrowse link
G FGB fibrinogen beta chain ISO RGD PMID:26149056 RGD:11352249 NCBI chr 8:74,598,170...74,607,409
Ensembl chr 8:74,595,688...74,607,409
JBrowse link
G FGG fibrinogen gamma chain ISO RGD PMID:26149056 RGD:11352249 NCBI chr 8:74,553,040...74,562,151
Ensembl chr 8:74,553,105...74,563,688
JBrowse link
G PLAT plasminogen activator, tissue type ISO RGD PMID:26149056 RGD:11352249 NCBI chr17:11,195,599...11,223,821
Ensembl chr17:11,195,602...11,224,032
JBrowse link
G PLAU plasminogen activator, urokinase ISO RGD PMID:26149056 RGD:11352249 NCBI chr14:76,629,313...76,635,173
Ensembl chr14:76,629,299...76,635,172
JBrowse link
G PLG plasminogen ISO RGD PMID:26149056 RGD:11352249 NCBI chr 1:7,062,399...7,109,521
Ensembl chr 1:7,061,192...7,110,555
JBrowse link
G SERPINA5 serpin family A member 5 ISO RGD PMID:26149056 RGD:11352249 NCBI chr 7:115,799,414...115,810,825
Ensembl chr 7:115,802,150...115,810,824
JBrowse link
G SERPINB2 serpin family B member 2 ISO RGD PMID:26149056 RGD:11352249 NCBI chr 1:157,871,919...157,886,525
Ensembl chr 1:157,872,212...157,886,602
JBrowse link
G SERPINE1 serpin family E member 1 ISO RGD PMID:26149056 RGD:11352249 NCBI chr 3:8,863,738...8,871,572
Ensembl chr 3:8,863,695...8,871,547
JBrowse link
G SERPINE2 serpin family E member 2 ISO RGD PMID:26149056 RGD:11352249 NCBI chr15:125,748,383...125,777,788
Ensembl chr15:125,748,394...125,816,215
JBrowse link
G SERPINF2 serpin family F member 2 ISO RGD PMID:26149056 RGD:11352249 NCBI chr12:47,934,551...47,942,283
Ensembl chr12:47,933,864...47,942,285
JBrowse link
folate cycle metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 7:53,748,585...53,794,777
Ensembl chr 7:53,748,653...53,794,706
JBrowse link
G AMT aminomethyltransferase ISO RGD PMID:20645850 RGD:7242560 NCBI chr13:31,995,600...32,002,514
Ensembl chr13:31,995,595...32,002,470
JBrowse link
G DHFR dihydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 2:89,230,660...89,255,830 JBrowse link
G DLD dihydrolipoamide dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 9:107,642,129...107,668,443
Ensembl chr 9:107,642,095...107,673,583
JBrowse link
G DMGDH dimethylglycine dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 2:87,791,827...87,867,189
Ensembl chr 2:87,791,943...87,866,679
JBrowse link
G FOLH1B folate hydrolase 1B ISO RGD PMID:16859665 PMID:20814827 RGD:7242426 RGD:7242559 NCBI chr 9:22,903,997...22,960,648
Ensembl chr 9:22,903,979...22,963,472
JBrowse link
G FOLR1 folate receptor alpha ISO RGD PMID:22108709 RGD:7242557 NCBI chr 9:6,753,513...6,760,433
Ensembl chr 9:6,757,040...6,760,402
JBrowse link
G FOLR2 folate receptor 2 (fetal) ISO RGD PMID:22108709 RGD:7242557 NCBI chr 9:6,785,308...6,790,466
Ensembl chr 9:6,785,303...6,790,465
JBrowse link
G FPGS folylpolyglutamate synthase ISO RGD PMID:16859665 RGD:7242559 NCBI chr 1:268,281,298...268,309,397
Ensembl chr 1:268,287,765...268,309,398
JBrowse link
G GCSH glycine cleavage system protein H ISO RGD PMID:20645850 RGD:7242560 NCBI chr 6:7,171,186...7,184,732
Ensembl chr 6:7,171,192...7,184,729
JBrowse link
G GGH gamma-glutamyl hydrolase ISO RGD PMID:16859665 RGD:7242559 NCBI chr 4:70,996,730...71,020,513
Ensembl chr 4:70,996,755...71,021,838
JBrowse link
G GLDC glycine decarboxylase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 1:215,608,854...215,715,062
Ensembl chr 1:215,608,849...215,715,059
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387
JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like ISO RGD PMID:22108709 RGD:7242557 NCBI chr 1:15,140,929...15,330,265
Ensembl chr 1:15,140,899...15,329,986
JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO RGD PMID:20645850 PMID:22108709 RGD:7242557 RGD:7242560 NCBI chr 3:68,819,171...68,833,641
Ensembl chr 3:68,818,119...68,833,600
JBrowse link
G MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like ISO RGD PMID:22108709 RGD:7242557 NCBI chr 8:70,179,701...70,288,356
Ensembl chr 8:70,179,658...70,290,047
JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22108709 RGD:7242557 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763
JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,228...74,270,783
JBrowse link
G SARDH sarcosine dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 1:273,230,357...273,295,170
Ensembl chr 1:273,230,375...273,294,621
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:20645850 PMID:22108709 RGD:7242557 RGD:7242560 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319
JBrowse link
G SLC19A1 solute carrier family 19 member 1 ISO RGD PMID:20814827 PMID:22108709 RGD:7242426 RGD:7242557 NCBI chr13:207,986,094...208,007,855
Ensembl chr13:207,986,098...208,007,675
JBrowse link
G SLC25A32 solute carrier family 25 member 32 ISO RGD PMID:22332074 RGD:7242561 NCBI chr 4:33,704,810...33,727,796
Ensembl chr 4:33,704,771...33,730,130
JBrowse link
G SLC46A1 solute carrier family 46 member 1 ISO RGD PMID:20814827 PMID:22108709 RGD:7242426 RGD:7242557 NCBI chr12:44,677,499...44,686,277
Ensembl chr12:44,677,502...44,686,250
JBrowse link
folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:14729668 RGD:1547843 NCBI chr 7:53,748,585...53,794,777
Ensembl chr 7:53,748,653...53,794,706
JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:9332377 PMID:22332074 RGD:70804 RGD:7242561 NCBI chr15:117,617,584...117,649,063
Ensembl chr15:117,617,502...117,649,107
JBrowse link
G DHFR dihydrofolate reductase ISO RGD PMID:11502523 PMID:22332074 RGD:1298877 RGD:7242561 NCBI chr 2:89,230,660...89,255,830 JBrowse link
G DMGDH dimethylglycine dehydrogenase ISO RGD PMID:15358367 RGD:1547831 NCBI chr 2:87,791,827...87,867,189
Ensembl chr 2:87,791,943...87,866,679
JBrowse link
G FOLH1B folate hydrolase 1B ISO RGD PMID:9501243 RGD:728645 NCBI chr 9:22,903,997...22,960,648
Ensembl chr 9:22,903,979...22,963,472
JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:12450384 PMID:22332074 RGD:1547842 RGD:7242561 NCBI chr13:197,130,898...197,158,797
Ensembl chr13:197,130,904...197,161,891
JBrowse link
G GNMT glycine N-methyltransferase ISO RGD PMID:8278367 RGD:1545057 NCBI chr 7:38,038,359...38,041,218
Ensembl chr 7:38,038,358...38,041,217
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:2186031 PMID:22332074 RGD:1299513 RGD:7242561 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387
JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO RGD PMID:9454603 RGD:1540378 NCBI chr 3:68,819,171...68,833,641
Ensembl chr 3:68,818,119...68,833,600
JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO RGD PMID:11933257 PMID:22332074 RGD:1535021 RGD:7242561 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:15845641 PMID:20814827 RGD:1359026 RGD:7242426 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763
JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,228...74,270,783
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 ISO RGD PMID:3110140 PMID:15671219 PMID:22332074 RGD:1359815 RGD:2300383 RGD:7242561 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:3110140 PMID:15671219 PMID:22332074 RGD:1359815 RGD:2300383 RGD:7242561 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319
JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:9894005 PMID:22332074 RGD:1545055 RGD:7242561 NCBI chr 6:105,642,730...105,660,279
Ensembl chr 6:105,642,381...105,660,578
JBrowse link
folate metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO SMPDB
RGD
PMID:14729668 RGD:1547843 SMP:00053 NCBI chr 7:53,748,585...53,794,777
Ensembl chr 7:53,748,653...53,794,706
JBrowse link
G DHFR dihydrofolate reductase ISO SMPDB
RGD
PMID:11502523 RGD:1298877 SMP:00053 NCBI chr 2:89,230,660...89,255,830 JBrowse link
G DMGDH dimethylglycine dehydrogenase ISO RGD PMID:15358367 RGD:1547831 NCBI chr 2:87,791,827...87,867,189
Ensembl chr 2:87,791,943...87,866,679
JBrowse link
G FOLH1B folate hydrolase 1B ISO RGD PMID:9816319 RGD:151347637 NCBI chr 9:22,903,997...22,960,648
Ensembl chr 9:22,903,979...22,963,472
JBrowse link
G FOLR2 folate receptor 2 (fetal) ISO RGD PMID:8445646 RGD:1540379 NCBI chr 9:6,785,308...6,790,466
Ensembl chr 9:6,785,303...6,790,465
JBrowse link
G FPGS folylpolyglutamate synthase ISO SMPDB SMP:00053 NCBI chr 1:268,281,298...268,309,397
Ensembl chr 1:268,287,765...268,309,398
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase ISO SMPDB SMP:00053
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:12450384 RGD:1547842 NCBI chr13:197,130,898...197,158,797
Ensembl chr13:197,130,904...197,161,891
JBrowse link
G GGH gamma-glutamyl hydrolase ISO SMPDB SMP:00053 NCBI chr 4:70,996,730...71,020,513
Ensembl chr 4:70,996,755...71,021,838
JBrowse link
G GNMT glycine N-methyltransferase ISO RGD PMID:15347642 RGD:1359070 NCBI chr 7:38,038,359...38,041,218
Ensembl chr 7:38,038,358...38,041,217
JBrowse link
G LOC102167410 5-formyltetrahydrofolate cyclo-ligase ISO SMPDB SMP:00053 NCBI chr 7:48,717,518...48,873,492
Ensembl chr 7:48,717,851...48,873,455
JBrowse link
G MTFMT mitochondrial methionyl-tRNA formyltransferase ISO SMPDB SMP:00053 NCBI chr 1:106,970,620...107,001,563
Ensembl chr 1:106,970,640...107,001,564
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO SMPDB
RGD
PMID:2186031 RGD:1299513 SMP:00053 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387
JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like ISO SMPDB SMP:00053 NCBI chr 1:15,140,929...15,330,265
Ensembl chr 1:15,140,899...15,329,986
JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO SMPDB
RGD
PMID:9454603 RGD:1540378 SMP:00053 NCBI chr 3:68,819,171...68,833,641
Ensembl chr 3:68,818,119...68,833,600
JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO SMPDB
RGD
PMID:11933257 RGD:1535021 SMP:00053 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:15845641 RGD:1359026 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763
JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:15979034 RGD:1359037 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,228...74,270,783
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 ISO RGD PMID:15671219 RGD:1359815 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:15671219 RGD:1359815 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319
JBrowse link
G SLC19A1 solute carrier family 19 member 1 ISO RGD PMID:11600421 RGD:735239 NCBI chr13:207,986,094...208,007,855
Ensembl chr13:207,986,098...208,007,675
JBrowse link
G SLC46A1 solute carrier family 46 member 1 ISO SMPDB SMP:00053 NCBI chr12:44,677,499...44,686,277
Ensembl chr12:44,677,502...44,686,250
JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:9894005 RGD:1545055 NCBI chr 6:105,642,730...105,660,279
Ensembl chr 6:105,642,381...105,660,578
JBrowse link
ghrelin system pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide ISO RGD PMID:15788704 RGD:1642818 NCBI chr13:66,442,106...66,453,576
Ensembl chr13:66,445,992...66,452,917
JBrowse link
G GHSR growth hormone secretagogue receptor ISO RGD PMID:15788704 RGD:1642818 NCBI chr13:110,981,465...111,006,149
Ensembl chr13:110,983,298...111,038,324
JBrowse link
glucagon signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY5 adenylate cyclase 5 ISO RGD PMID:10894801 PMID:17010343 RGD:2315004 RGD:2315006 NCBI chr13:136,965,746...137,133,795
Ensembl chr13:136,972,801...137,135,347
JBrowse link
G ADCY6 adenylate cyclase 6 ISO RGD PMID:10894801 PMID:17010343 RGD:2315004 RGD:2315006 NCBI chr 5:14,834,420...14,855,309
Ensembl chr 5:14,834,426...14,850,728
JBrowse link
G GCG glucagon ISO RGD PMID:16929363 RGD:2315015 NCBI chr15:68,800,557...68,810,268
Ensembl chr15:68,800,560...68,810,242
JBrowse link
G GCGR glucagon receptor ISO RGD PMID:15687107 PMID:17010343 RGD:1625210 RGD:2315004 NCBI chr12:1,149,589...1,157,234
Ensembl chr12:1,146,069...1,157,234
JBrowse link
G GNAS GNAS complex locus ISO RGD PMID:15687107 PMID:17010343 RGD:1625210 RGD:2315004 NCBI chr17:58,985,580...59,053,022
Ensembl chr17:58,998,981...59,053,021
JBrowse link
gluconeogenesis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOB aldolase, fructose-bisphosphate B ISO RGD PMID:5251864 RGD:2302796 NCBI chr 1:243,127,870...243,141,504
Ensembl chr 1:243,110,585...243,141,418
JBrowse link
G BPGM bisphosphoglycerate mutase ISO SMPDB SMP:00128 NCBI chr18:14,555,919...14,593,321
Ensembl chr18:14,556,832...14,593,252
JBrowse link
G ENO1 enolase 1 ISO RGD
SMPDB
PMID:2966075 RGD:2302802 SMP:00128 NCBI chr 6:69,385,879...69,401,664
Ensembl chr 6:69,385,879...69,401,151
JBrowse link
G ENO2 enolase 2 ISO RGD PMID:15720133 RGD:2302795 NCBI chr 5:63,799,927...63,809,067
Ensembl chr 5:63,799,930...63,809,410
JBrowse link
G FBP1 fructose-bisphosphatase 1 ISO RGD
SMPDB
PMID:4353083 PMID:11440903 RGD:2302851 RGD:2302970 SMP:00128 NCBI chr10:27,588,609...27,622,225
Ensembl chr10:27,588,570...27,622,674
JBrowse link
G FBP2 fructose-bisphosphatase 2 ISO RGD PMID:4353083 PMID:11440903 RGD:2302851 RGD:2302970 NCBI chr10:27,631,833...27,661,704
Ensembl chr10:27,631,496...27,665,246
JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 ISO SMPDB
RGD
PMID:4303362 PMID:4353083 PMID:11440903 RGD:2302850 RGD:2302851 RGD:2302970 SMP:00128 NCBI chr12:19,965,885...19,975,783
Ensembl chr12:19,965,330...19,975,857
JBrowse link
G G6PC3 glucose-6-phosphatase catalytic subunit 3 ISO RGD PMID:4303362 PMID:4353083 PMID:11440903 RGD:2302850 RGD:2302851 RGD:2302970 NCBI chr12:19,121,540...19,126,291
Ensembl chr12:19,121,544...19,126,295
JBrowse link
G GALM galactose mutarotase ISO SMPDB SMP:00128 NCBI chr 3:101,617,521...101,682,821
Ensembl chr 3:101,617,526...101,753,125
JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase ISO RGD
SMPDB
PMID:15720133 RGD:2302795 SMP:00128 NCBI chr 5:64,129,678...64,135,194
Ensembl chr 5:64,129,679...64,133,991
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:2966075 RGD:2302802 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 ISO RGD PMID:2966075 RGD:2302802 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067
JBrowse link
G GPI glucose-6-phosphate isomerase ISO SMPDB SMP:00128 NCBI chr 6:44,038,374...44,069,331
Ensembl chr 6:44,038,357...44,069,328
JBrowse link
G HK2 hexokinase 2 ISO SMPDB SMP:00128 NCBI chr 3:68,155,656...68,231,187
Ensembl chr 3:68,153,835...68,231,615
JBrowse link
G MDH2 malate dehydrogenase 2 ISO SMPDB SMP:00128 NCBI chr 3:10,120,121...10,132,705
Ensembl chr 3:10,120,083...10,132,752
JBrowse link
G MPC1 mitochondrial pyruvate carrier 1 ISO SMPDB SMP:00128 NCBI chr 1:2,541,475...2,552,864 JBrowse link
G PANK1 pantothenate kinase 1 ISO SMPDB SMP:00128 NCBI chr14:101,410,139...101,512,498
Ensembl chr14:101,409,253...101,473,945
JBrowse link
G PC pyruvate carboxylase ISO SMPDB
RGD
PMID:4353083 PMID:5773282 PMID:6049928 PMID:18613815 RGD:2302809 RGD:2302851 RGD:2302971 RGD:2302972 SMP:00128 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,517...5,587,797
JBrowse link
G PCK1 phosphoenolpyruvate carboxykinase 1 ISO SMPDB
RGD
PMID:2966075 PMID:4303362 PMID:4353083 PMID:6049928 PMID:11440903 More... RGD:2302802 RGD:2302809 RGD:2302850 RGD:2302851 RGD:2302970 RGD:2302971 SMP:00128 NCBI chr17:57,930,507...57,936,523
Ensembl chr17:57,930,432...57,936,522
JBrowse link
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial ISO RGD PMID:2966075 PMID:4353083 PMID:6049928 PMID:11440903 PMID:18613815 RGD:2302802 RGD:2302809 RGD:2302851 RGD:2302970 RGD:2302971 NCBI chr 7:75,187,195...75,197,613
Ensembl chr 7:75,187,197...75,197,733
JBrowse link
G PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 ISO RGD PMID:15170386 RGD:2302793 NCBI chr  X:47,771,751...47,859,079
Ensembl chr  X:47,765,154...47,859,061
JBrowse link
G PGAM1 phosphoglycerate mutase 1 ISO SMPDB SMP:00128 NCBI chr14:108,822,782...108,832,818
Ensembl chr14:108,822,812...108,833,058
JBrowse link
G PGAM2 phosphoglycerate mutase 2 ISO RGD
SMPDB
PMID:15720133 PMID:18092946 RGD:2302794 RGD:2302795 SMP:00128 NCBI chr18:48,693,832...48,712,787
Ensembl chr18:48,710,347...48,713,862
JBrowse link
G PGK1 phosphoglycerate kinase 1 ISO RGD PMID:3091090 PMID:15720133 RGD:2302795 RGD:2302860 NCBI chr  X:62,187,472...62,210,321
Ensembl chr  X:62,187,434...62,210,705
JBrowse link
G PGM1 phosphoglucomutase 1 ISO SMPDB SMP:00128 NCBI chr 6:148,851,183...148,918,891
Ensembl chr 6:148,851,183...148,994,952
JBrowse link
G SLC25A11 solute carrier family 25 member 11 ISO SMPDB SMP:00128 NCBI chr12:51,970,794...51,973,668
Ensembl chr12:51,970,806...51,975,548
JBrowse link
G SLC2A2 solute carrier family 2 member 2 ISO SMPDB SMP:00128 NCBI chr13:109,592,595...109,614,105
Ensembl chr13:109,587,258...109,638,510
JBrowse link
G SLC37A4 solute carrier family 37 member 4 ISO SMPDB SMP:00128 NCBI chr 9:46,247,278...46,254,068
Ensembl chr 9:46,247,284...46,254,031
JBrowse link
G TPI1 triosephosphate isomerase 1 ISO SMPDB SMP:00128 NCBI chr 5:63,839,473...63,842,853
Ensembl chr 5:63,838,506...63,843,134
JBrowse link
glycogen biosynthetic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBE1 1,4-alpha-glucan branching enzyme 1 ISO RGD PMID:6449198 RGD:1642743 NCBI chr13:173,634,401...173,909,646
Ensembl chr13:173,634,454...173,914,756
JBrowse link
G GCK glucokinase ISO RGD PMID:15138155 RGD:1582633 NCBI chr18:50,979,167...51,024,500
Ensembl chr18:50,979,167...51,029,844
JBrowse link
G GSK3A glycogen synthase kinase 3 alpha ISO RGD PMID:17530463 RGD:2306093 NCBI chr 6:49,690,319...49,700,735
Ensembl chr 6:49,690,370...49,701,189
JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO RGD PMID:17530463 RGD:2306093 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,569
JBrowse link
G GYG1 glycogenin 1 ISO RGD PMID:8224611 PMID:10710493 RGD:2303736 RGD:2304070 NCBI chr13:89,221,086...89,259,569
Ensembl chr13:89,221,157...89,259,792
JBrowse link
G GYS1 glycogen synthase 1 ISO RGD PMID:6449198 PMID:12297270 RGD:1642743 RGD:2304106 NCBI chr 6:54,234,600...54,250,211
Ensembl chr 6:54,233,050...54,250,261
JBrowse link
G GYS2 glycogen synthase 2 ISO RGD PMID:6449198 PMID:12297270 PMID:15138155 RGD:1582633 RGD:1642743 RGD:2304106 NCBI chr 5:51,862,952...51,915,153
Ensembl chr 5:51,862,863...51,917,757
JBrowse link
G PGM1 phosphoglucomutase 1 ISO RGD PMID:9549096 RGD:2304188 NCBI chr 6:148,851,183...148,918,891
Ensembl chr 6:148,851,183...148,994,952
JBrowse link
G PGM2 phosphoglucomutase 2 ISO RGD PMID:9549096 RGD:2304188 NCBI chr 8:29,307,628...29,343,012
Ensembl chr 8:29,307,685...29,342,861
JBrowse link
G PGM3 phosphoglucomutase 3 ISO RGD PMID:9549096 RGD:2304188 NCBI chr 1:83,003,622...83,029,392
Ensembl chr 1:83,003,604...83,029,897
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 PMID:14715909 RGD:2304267 RGD:2304325 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,119,939...5,123,617
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 PMID:14715909 RGD:2304267 RGD:2304325 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,688...110,474,891
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma ISO RGD PMID:14715909 RGD:2304325 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,545...32,091,499
JBrowse link
G PPP1R3A protein phosphatase 1 regulatory subunit 3A ISO RGD PMID:14715909 RGD:2304325 NCBI chr18:31,997,667...32,039,949
Ensembl chr18:31,997,713...32,039,852
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B ISO RGD PMID:7720853 PMID:11716774 PMID:14715909 RGD:2304267 RGD:2304325 RGD:2306167 NCBI chr15:56,002,383...56,013,477
Ensembl chr15:56,002,378...56,013,478
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chr14:103,273,401...103,278,757
Ensembl chr14:103,273,405...103,278,762
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chr17:59,963,560...59,967,143
Ensembl chr17:59,964,585...59,967,113
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chr 7:75,770,813...75,782,717
Ensembl chr 7:75,776,720...75,780,649
JBrowse link
glycogen degradation pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase ISO RGD PMID:11766064 PMID:15180797 RGD:1642741 RGD:2304191 NCBI chr 4:118,186,031...118,269,106
Ensembl chr 4:118,177,377...118,269,101
JBrowse link
G CALM1 calmodulin 1 ISO RGD PMID:10487978 RGD:2305981 NCBI chr 7:112,160,823...112,171,754
Ensembl chr 7:112,160,806...112,171,744
JBrowse link
G CALM2 calmodulin 2 ISO RGD PMID:10487978 RGD:2305981 NCBI chr 3:93,371,765...93,386,378
Ensembl chr 3:93,372,045...93,386,218
JBrowse link
G CALM3 calmodulin 3 ISO RGD PMID:10487978 RGD:2305981 NCBI chr 6:52,506,979...52,516,704
Ensembl chr 6:52,506,674...52,516,703
JBrowse link
G PGM1 phosphoglucomutase 1 ISO RGD PMID:9549096 RGD:2304188 NCBI chr 6:148,851,183...148,918,891
Ensembl chr 6:148,851,183...148,994,952
JBrowse link
G PGM2 phosphoglucomutase 2 ISO RGD PMID:9549096 RGD:2304188 NCBI chr 8:29,307,628...29,343,012
Ensembl chr 8:29,307,685...29,342,861
JBrowse link
G PGM3 phosphoglucomutase 3 ISO RGD PMID:9549096 RGD:2304188 NCBI chr 1:83,003,622...83,029,392
Ensembl chr 1:83,003,604...83,029,897
JBrowse link
G PHKA1 phosphorylase kinase regulatory subunit alpha 1 ISO RGD PMID:10487978 RGD:2305981 NCBI chr  X:58,456,097...58,583,216
Ensembl chr  X:58,455,939...58,583,216
JBrowse link
G PHKA2 phosphorylase kinase regulatory subunit alpha 2 ISO RGD PMID:10487978 RGD:2305981 NCBI chr  X:15,279,398...15,365,731
Ensembl chr  X:15,283,120...15,365,565
JBrowse link
G PHKB phosphorylase kinase regulatory subunit beta ISO RGD PMID:10487978 RGD:2305981 NCBI chr 6:36,994,424...37,193,631
Ensembl chr 6:36,991,274...37,193,593
JBrowse link
G PHKG1 phosphorylase kinase catalytic subunit gamma 1 ISO RGD PMID:10487978 RGD:2305981 NCBI chr 3:16,822,042...16,831,054
Ensembl chr 3:16,822,043...16,834,329
JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 ISO RGD PMID:10487978 RGD:2305981 NCBI chr 3:17,640,790...17,656,765
Ensembl chr 3:17,639,996...17,656,618
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 PMID:14715909 RGD:2304267 RGD:2304325 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,119,939...5,123,617
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 PMID:14715909 RGD:2304267 RGD:2304325 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,688...110,474,891
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma ISO RGD PMID:14715909 RGD:2304325 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,545...32,091,499
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G PPP1R3A protein phosphatase 1 regulatory subunit 3A ISO RGD PMID:14715909 RGD:2304325 NCBI chr18:31,997,667...32,039,949
Ensembl chr18:31,997,713...32,039,852
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G PPP1R3B protein phosphatase 1 regulatory subunit 3B ISO RGD PMID:7720853 PMID:11716774 PMID:14715909 RGD:2304267 RGD:2304325 RGD:2306167 NCBI chr15:56,002,383...56,013,477
Ensembl chr15:56,002,378...56,013,478
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chr14:103,273,401...103,278,757
Ensembl chr14:103,273,405...103,278,762
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chr17:59,963,560...59,967,143
Ensembl chr17:59,964,585...59,967,113
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chr 7:75,770,813...75,782,717
Ensembl chr 7:75,776,720...75,780,649
JBrowse link
G PYGB glycogen phosphorylase B ISO RGD PMID:1544539 PMID:11340058 RGD:1642822 RGD:2304109 NCBI chr17:30,940,457...30,995,688
Ensembl chr17:30,940,452...30,995,691
JBrowse link
G PYGL glycogen phosphorylase L