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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:homeostasis pathway
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Accession:PW:0000355 term browser browse the term
Definition:Those pathways involved in the maintenance of the internal environment of an organism, the adequate levels of substances and nutrients, the stability of normal body states and the feedback regulatory mechanisms that control them.
Synonyms:related_synonym: homeostatic process


show annotations for term's descendants           Sort by:
adenosine monophosphate-activated protein kinase (AMPK) signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cab39 calcium binding protein 39 TAS RGD PMID:15509864 RGD:1600678 NCBI chr 1:85,721,148...85,779,298
Ensembl chr 1:85,721,162...85,779,297 		JBrowse link
G Calm1 calmodulin 1 ISO RGD PMID:16054095 RGD:2311420 NCBI chr12:100,165,694...100,176,083
Ensembl chr12:100,165,694...100,176,073 		JBrowse link
G Calm2 calmodulin 2 ISO RGD PMID:16054095 RGD:2311420 NCBI chr17:87,740,829...87,754,363
Ensembl chr17:87,740,840...87,754,363 		JBrowse link
G Calm3 calmodulin 3 ISO RGD PMID:16054095 RGD:2311420 NCBI chr 7:16,649,304...16,657,957
Ensembl chr 7:16,649,304...16,658,039 		JBrowse link
G Camkk1 calcium/calmodulin-dependent protein kinase kinase 1, alpha ISO RGD PMID:16054095 RGD:2311420 NCBI chr11:72,906,869...72,932,899
Ensembl chr11:72,909,834...72,932,899 		JBrowse link
G Camkk2 calcium/calmodulin-dependent protein kinase kinase 2, beta ISO RGD PMID:16054095 RGD:2311420 NCBI chr 5:122,856,064...122,918,295
Ensembl chr 5:122,869,233...122,917,472 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1a, liver ISO RGD PMID:30868489 RGD:25823184 NCBI chr19:3,372,328...3,435,735
Ensembl chr19:3,372,334...3,435,733 		JBrowse link
G Ppm1e protein phosphatase 1E (PP2C domain containing) ISO RGD PMID:20801214 RGD:7794756 NCBI chr11:87,117,724...87,249,884
Ensembl chr11:87,117,732...87,249,849 		JBrowse link
G Ppm1f protein phosphatase 1F (PP2C domain containing) ISO RGD PMID:20801214 RGD:7794756 NCBI chr16:16,714,314...16,745,239
Ensembl chr16:16,714,333...16,745,228 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:21782450 RGD:7794757 NCBI chr19:4,242,173...4,245,418
Ensembl chr19:4,242,064...4,245,419 		JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISO RGD PMID:21782450 RGD:7794757 NCBI chr 5:32,616,192...32,651,057
Ensembl chr 5:32,616,187...32,674,777 		JBrowse link
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D ISO RGD PMID:21782450 RGD:7794757 NCBI chr 2:178,052,999...178,056,256
Ensembl chr 2:178,052,999...178,056,265 		JBrowse link
G Ppp2ca protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform ISO RGD PMID:21782450 RGD:7794757 NCBI chr11:51,989,651...52,013,576
Ensembl chr11:51,989,508...52,018,605 		JBrowse link
G Prkaa1 protein kinase, AMP-activated, alpha 1 catalytic subunit ISO RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr15:5,172,641...5,211,380
Ensembl chr15:5,173,343...5,211,380 		JBrowse link
G Prkaa2 protein kinase, AMP-activated, alpha 2 catalytic subunit ISO RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr 4:104,886,846...104,967,095
Ensembl chr 4:104,887,071...104,967,087 		JBrowse link
G Prkab1 protein kinase, AMP-activated, beta 1 non-catalytic subunit ISO RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr 5:116,151,654...116,162,449
Ensembl chr 5:116,151,645...116,162,567 		JBrowse link
G Prkab2 protein kinase, AMP-activated, beta 2 non-catalytic subunit ISO RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr 3:97,565,527...97,581,128
Ensembl chr 3:97,565,509...97,581,128 		JBrowse link
G Prkag1 protein kinase, AMP-activated, gamma 1 non-catalytic subunit ISO RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr15:98,710,678...98,729,354
Ensembl chr15:98,710,678...98,729,402 		JBrowse link
G Prkag2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit ISO RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr 5:25,067,733...25,311,576
Ensembl chr 5:25,067,742...25,305,640 		JBrowse link
G Prkag3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit ISO RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr 1:74,778,062...74,788,623
Ensembl chr 1:74,778,081...74,788,380 		JBrowse link
G Stk11 serine/threonine kinase 11 TAS RGD PMID:15509864 RGD:1600678 NCBI chr10:79,951,602...79,966,513
Ensembl chr10:79,951,637...79,966,516 		JBrowse link
G Strada STE20-related kinase adaptor alpha TAS RGD PMID:15509864 RGD:1600678 NCBI chr11:106,053,739...106,084,460
Ensembl chr11:106,054,156...106,092,994 		JBrowse link
G Tsc1 TSC complex subunit 1 ISO RGD PMID:31787541 RGD:25823196 NCBI chr 2:28,531,005...28,581,183
Ensembl chr 2:28,531,240...28,581,179 		JBrowse link
alpha-helical insertion pathway of mitochondrial protein import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tomm70a translocase of outer mitochondrial membrane 70A ISO RGD PMID:25633533 RGD:10412658 NCBI chr16:56,942,077...56,974,893
Ensembl chr16:56,942,066...56,977,068 		JBrowse link
altered citric acid cycle pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fh1 fumarate hydratase 1 ISO RGD PMID:17211469 RGD:6907135 NCBI chr 1:175,428,944...175,453,201
Ensembl chr 1:175,427,940...175,453,201 		JBrowse link
G Sdhb succinate dehydrogenase complex, subunit B, iron sulfur (Ip) ISO RGD PMID:21771581 RGD:6907134 NCBI chr 4:140,688,582...140,706,509
Ensembl chr 4:140,688,514...140,706,504 		JBrowse link
G Sdhd succinate dehydrogenase complex, subunit D, integral membrane protein ISO RGD PMID:21771581 RGD:6907134 NCBI chr 9:50,507,640...50,515,149
Ensembl chr 9:50,507,657...50,515,112 		JBrowse link
altered DNA modification pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mbd4 methyl-CpG binding domain protein 4 ISO in silico assessment of loss of DNA-protein interactions and observed enhancement of DNA repair capacity (DRC) in the context of nucleotide excision repair (NER) pathway for SNP RGD PMID:24004570 RGD:9588971 NCBI chr 6:115,817,658...115,830,361
Ensembl chr 6:115,817,658...115,830,332 		JBrowse link
altered energy homeostasis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lep leptin ISO RGD PMID:11102451 PMID:15703762 RGD:1357910 RGD:61790 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876 		JBrowse link
G Lepr leptin receptor ISO RGD PMID:11102451 PMID:15703762 RGD:1357910 RGD:61790 NCBI chr 4:101,574,393...101,676,375
Ensembl chr 4:101,574,601...101,672,549 		JBrowse link
G Mc4r melanocortin 4 receptor ISO RGD PMID:15189116 RGD:1357925 NCBI chr18:66,990,776...66,993,558
Ensembl chr18:66,990,775...66,993,577 		JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 ISO RGD PMID:11874690 RGD:1357926 NCBI chr13:75,237,407...75,282,980
Ensembl chr13:75,237,945...75,282,980 		JBrowse link
G Pomc pro-opiomelanocortin-alpha ISO RGD PMID:11874690 RGD:1357926 NCBI chr12:4,004,945...4,010,643
Ensembl chr12:4,004,951...4,010,642 		JBrowse link
altered folate cycle metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 6:90,527,751...90,576,153
Ensembl chr 6:90,463,409...90,577,185 		JBrowse link
G Dhfr dihydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr13:92,491,291...92,525,561
Ensembl chr13:92,491,234...92,525,561 		JBrowse link
G Folr1 folate receptor 1 (adult) ISO RGD PMID:22108709 RGD:7242557 NCBI chr 7:101,507,551...101,519,974
Ensembl chr 7:101,507,538...101,519,995 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase ISO RGD PMID:22108709 RGD:7242557 NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22108709 PMID:22108709 RGD:7242557, RGD:7242557 NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268 		JBrowse link
G Slc46a1 solute carrier family 46, member 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr11:78,356,527...78,362,771
Ensembl chr11:78,356,523...78,362,885 		JBrowse link
altered folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase ISO RGD PMID:22353665 RGD:7242562 NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:22353665 RGD:7242562 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22353665 RGD:7242562 NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999 		JBrowse link
altered Hedgehog signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Boc biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein ISO RGD PMID:18772397 RGD:5490966 NCBI chr16:44,305,408...44,379,233
Ensembl chr16:44,305,412...44,379,260 		JBrowse link
G Dhh desert hedgehog ISO RGD PMID:11118005 RGD:634737 NCBI chr15:98,779,496...98,796,443
Ensembl chr15:98,789,033...98,796,421 		JBrowse link
G Gli1 GLI-Kruppel family member GLI1 ISO RGD PMID:21186299 PMID:18772397 RGD:5491005, RGD:5490966 NCBI chr10:127,165,751...127,177,448
Ensembl chr10:127,165,751...127,177,843 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 ISO RGD PMID:18772397 RGD:5490966 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Lrp2 low density lipoprotein receptor-related protein 2 ISO RGD PMID:18772397 RGD:5490966 NCBI chr 2:69,254,679...69,416,373
Ensembl chr 2:69,254,684...69,416,409 		JBrowse link
G Shh sonic hedgehog ISO RGD PMID:19506583 RGD:5490965 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254 		JBrowse link
G Smo smoothened, frizzled class receptor ISO RGD PMID:9422511 RGD:704355 NCBI chr 6:29,735,480...29,761,359
Ensembl chr 6:29,735,502...29,761,364 		JBrowse link
altered hypoxia inducible factor pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vhl von Hippel-Lindau tumor suppressor ISO RGD PMID:22035299 RGD:6907133 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594 		JBrowse link
altered insulin responsive facilitative sugar transporter mediated glucose transport pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt2 thymoma viral proto-oncogene 2 ISO RGD PMID:21979934 RGD:7248543 NCBI chr 7:27,290,977...27,340,251
Ensembl chr 7:27,290,977...27,340,251 		JBrowse link
G Tbc1d4 TBC1 domain family, member 4 ISO RGD PMID:19470471 RGD:7248544 NCBI chr14:101,679,800...101,846,717
Ensembl chr14:101,679,796...101,846,627 		JBrowse link
altered insulin secretion pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP-binding cassette, sub-family C (CFTR/MRP), member 8 ISO DNA:missense mutation::A1369S (human) RGD PMID:17259403 RGD:2313628 NCBI chr 7:45,753,952...45,829,441
Ensembl chr 7:45,753,947...45,829,457 		JBrowse link
G Kcnj11 potassium inwardly rectifying channel, subfamily J, member 11 ISO polymorphisms in the human gene are linked to altered insulin secretion; E23K polymorphism appears to confer susceptibility to diabetes type-2 in Caucasian population
DNA:missense mutation::p.E23K (human)		 RGD PMID:15565284 PMID:17259403 RGD:2313610, RGD:2313628 NCBI chr 7:45,746,545...45,750,215
Ensembl chr 7:45,743,377...45,750,188 		JBrowse link
altered insulin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ins2 insulin II ISO RGD PMID:9809695 RGD:2313694 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118 		JBrowse link
G Insr insulin receptor ISO RGD PMID:9809695 RGD:2313694 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
altered leptin system pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insr insulin receptor ISO increased basal hypothalamic leptin signaling without changes in leptin receptor expression after antisense-mediated hypothalamus-specific Insr knock-down RGD PMID:17585961 RGD:2290473 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617 		JBrowse link
G Lep leptin ISO RGD PMID:11102451 PMID:15703762 RGD:1357910 RGD:61790 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876 		JBrowse link
G Lepr leptin receptor ISO RGD PMID:17229951 RGD:1600611 NCBI chr 4:101,574,393...101,676,375
Ensembl chr 4:101,574,601...101,672,549 		JBrowse link
altered melanocortin system pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrp agouti related neuropeptide ISO RGD PMID:15189116 RGD:1357925 NCBI chr 8:106,293,327...106,306,477
Ensembl chr 8:106,293,330...106,364,025 		JBrowse link
G Mc4r melanocortin 4 receptor ISO RGD PMID:15189116 RGD:1357925 NCBI chr18:66,990,776...66,993,558
Ensembl chr18:66,990,775...66,993,577 		JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 ISO RGD PMID:15189116 PMID:11874690 RGD:1357925, RGD:1357926 NCBI chr13:75,237,407...75,282,980
Ensembl chr13:75,237,945...75,282,980 		JBrowse link
G Pomc pro-opiomelanocortin-alpha ISO RGD PMID:15189116 PMID:11874690 RGD:1357925, RGD:1357926 NCBI chr12:4,004,945...4,010,643
Ensembl chr12:4,004,951...4,010,642 		JBrowse link
G Sdc1 syndecan 1 TAS RGD PMID:15189116 RGD:1357925 NCBI chr12:8,821,396...8,843,716
Ensembl chr12:8,821,323...8,843,715 		JBrowse link
altered mitochondrial autophagy pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pink1 PTEN induced putative kinase 1 ISO RGD PMID:24735649 RGD:10450527 NCBI chr 4:138,040,718...138,053,631
Ensembl chr 4:138,040,720...138,053,618 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24735649 RGD:10450527 NCBI chr17:11,059,227...12,282,257
Ensembl chr17:11,059,271...12,282,248 		JBrowse link
altered retinoid cycle metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP-binding cassette, sub-family A (ABC1), member 4 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 3:121,837,547...121,973,719
Ensembl chr 3:121,838,092...121,973,772 		JBrowse link
G Lrat lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase) ISO RGD PMID:20212494 RGD:8547536 NCBI chr 3:82,799,889...82,811,281
Ensembl chr 3:82,799,886...82,811,280 		JBrowse link
G Rbp3 retinol binding protein 3, interstitial ISO RGD PMID:20212494 RGD:8547536 NCBI chr14:33,675,960...33,686,176
Ensembl chr14:33,675,960...33,686,173 		JBrowse link
G Rdh12 retinol dehydrogenase 12 ISO RGD PMID:20212494 RGD:8547536 NCBI chr12:79,255,687...79,269,438
Ensembl chr12:79,255,688...79,269,439 		JBrowse link
G Rlbp1 retinaldehyde binding protein 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 7:79,024,613...79,041,989
Ensembl chr 7:79,024,618...79,036,796 		JBrowse link
G Rpe65 retinal pigment epithelium 65 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 3:159,304,712...159,330,944
Ensembl chr 3:159,304,812...159,330,958 		JBrowse link
altered surfactant homeostasis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca3 ATP-binding cassette, sub-family A (ABC1), member 3 ISS RGD PMID:15985750 RGD:1549859 NCBI chr17:24,570,997...24,629,178
Ensembl chr17:24,570,924...24,629,175 		JBrowse link
altered vascular endothelial growth factor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt4 FMS-like tyrosine kinase 4 ISO RGD PMID:15563310 RGD:1334463 NCBI chr11:49,500,506...49,543,566
Ensembl chr11:49,500,090...49,543,566 		JBrowse link
altered vascular endothelial growth factor signaling pathway involving proteins affecting its expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdr kinase insert domain protein receptor ISO RGD PMID:18221855 RGD:2292019 NCBI chr 5:76,093,487...76,139,880
Ensembl chr 5:76,093,487...76,139,118 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:18221855 RGD:2292019 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
altered vascular endothelial growth factor signaling pathway involving the main players term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt4 FMS-like tyrosine kinase 4 ISO RGD PMID:15563310 RGD:1334463 NCBI chr11:49,500,506...49,543,566
Ensembl chr11:49,500,090...49,543,566 		JBrowse link
G Kdr kinase insert domain protein receptor ISO RGD PMID:18221855 RGD:2292019 NCBI chr 5:76,093,487...76,139,880
Ensembl chr 5:76,093,487...76,139,118 		JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:18221855 RGD:2292019 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
altered visual phototransduction pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga1 cyclic nucleotide gated channel alpha 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 5:72,761,039...72,800,095
Ensembl chr 5:72,761,039...72,801,618 		JBrowse link
G Cngb1 cyclic nucleotide gated channel beta 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 8:95,965,671...96,033,213
Ensembl chr 8:95,965,673...96,033,213 		JBrowse link
G Guca1b guanylate cyclase activator 1B ISO RGD PMID:20212494 RGD:8547536 NCBI chr17:47,692,526...47,703,892
Ensembl chr17:47,696,318...47,703,892 		JBrowse link
G Pde6a phosphodiesterase 6A, cGMP-specific, rod, alpha ISO RGD PMID:20212494 RGD:8547536 NCBI chr18:61,353,546...61,426,698
Ensembl chr18:61,353,387...61,422,995 		JBrowse link
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide ISO RGD PMID:20212494 RGD:8547536 NCBI chr 5:108,536,239...108,579,609
Ensembl chr 5:108,536,257...108,580,263 		JBrowse link
G Pde6g phosphodiesterase 6G, cGMP-specific, rod, gamma ISO RGD PMID:20212494 RGD:8547536 NCBI chr11:120,338,433...120,344,326
Ensembl chr11:120,338,431...120,344,326 		JBrowse link
G Rho rhodopsin ISO RGD PMID:20212494 RGD:8547536 NCBI chr 6:115,903,741...115,916,999
Ensembl chr 6:115,908,709...115,916,997 		JBrowse link
G Sag S-antigen, retina and pineal gland (arrestin) ISO RGD PMID:20212494 RGD:8547536 NCBI chr 1:87,731,402...87,772,880
Ensembl chr 1:87,731,402...87,772,880 		JBrowse link
angiotensin (1-7) signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 ISO RGD PMID:15283675 RGD:1598433 NCBI chr11:105,858,774...105,880,790
Ensembl chr11:105,858,771...105,880,790 		JBrowse link
G Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 ISO RGD PMID:15638741 RGD:1581742 NCBI chr  X:162,922,338...162,971,414
Ensembl chr  X:162,922,328...162,971,416 		JBrowse link
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) ISO RGD PMID:15951342 RGD:1581938 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Mas1 MAS1 oncogene TAS RGD PMID:16520407 RGD:1581931 NCBI chr17:13,056,981...13,087,037
Ensembl chr17:13,059,966...13,087,030 		JBrowse link
G Mme membrane metallo endopeptidase ISO RGD PMID:15638741 PMID:16520407 RGD:1581742, RGD:1581931 NCBI chr 3:63,202,632...63,291,134
Ensembl chr 3:63,148,958...63,293,451 		JBrowse link
angiotensin II signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 ISO RGD PMID:15638741 RGD:1581742 NCBI chr11:105,858,774...105,880,790
Ensembl chr11:105,858,771...105,880,790 		JBrowse link
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) TAS RGD PMID:16141358 RGD:1581847 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Agtr1a angiotensin II receptor, type 1a ISO RGD PMID:15590154 RGD:1579760 NCBI chr13:30,520,339...30,566,850
Ensembl chr13:30,520,424...30,566,850 		JBrowse link
G Agtr2 angiotensin II receptor, type 2 ISS RGD PMID:14657020 RGD:1566502 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403 		JBrowse link
G Ccl2 chemokine (C-C motif) ligand 2 ISS RGD PMID:14684844 RGD:1582323 NCBI chr11:81,926,403...81,928,278
Ensembl chr11:81,926,397...81,928,279 		JBrowse link
G Cma1 chymase 1, mast cell ISO RGD PMID:15869764 RGD:1581745 NCBI chr14:56,178,908...56,182,132
Ensembl chr14:56,178,908...56,182,132 		JBrowse link
G Jak2 Janus kinase 2 ISO RGD PMID:16269269 RGD:1600094 NCBI chr19:29,229,006...29,290,495
Ensembl chr19:29,229,228...29,290,480 		JBrowse link
G Olr1 oxidized low density lipoprotein (lectin-like) receptor 1 ISS RGD PMID:12661921 RGD:1580992 NCBI chr 6:129,456,113...129,484,312
Ensembl chr 6:129,462,207...129,484,128 		JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 ISS RGD PMID:14585963 RGD:1581775 NCBI chr17:24,292,654...24,370,957
Ensembl chr17:24,292,654...24,369,898 		JBrowse link
G Pla2g6 phospholipase A2, group VI ISO RGD PMID:17613534 RGD:12910844 NCBI chr15:79,170,428...79,212,915
Ensembl chr15:79,170,428...79,212,590 		JBrowse link
G Prkcz protein kinase C, zeta ISO RGD PMID:16113073 RGD:1642674 NCBI chr 4:155,344,575...155,445,885
Ensembl chr 4:155,344,586...155,445,818 		JBrowse link
angiotensin II signaling pathway via AT1 receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) TAS RGD PMID:16141358 RGD:1581847 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Agtr1a angiotensin II receptor, type 1a ISO
TAS		 RGD PMID:15590154 PMID:12446719 PMID:9287353 PMID:14559250 PMID:10977869 RGD:1579760, RGD:629553, RGD:5133683, RGD:2316188, RGD:1581825 NCBI chr13:30,520,339...30,566,850
Ensembl chr13:30,520,424...30,566,850 		JBrowse link
G Agtr1b angiotensin II receptor, type 1b TAS RGD PMID:10977869 RGD:1581825 NCBI chr 3:20,368,637...20,421,341
Ensembl chr 3:20,368,637...20,421,341 		JBrowse link
G Agtrap angiotensin II, type I receptor-associated protein ISO RGD PMID:17875818 RGD:2314353 NCBI chr 4:148,161,518...148,172,521
Ensembl chr 4:148,161,518...148,172,488 		JBrowse link
G Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 ISO RGD PMID:14559250 RGD:2316188 NCBI chr 7:100,997,296...101,061,793
Ensembl chr 7:100,997,274...101,061,793 		JBrowse link
G Arrb1 arrestin, beta 1 ISO RGD PMID:16304060 RGD:5133417 NCBI chr 7:99,184,356...99,255,979
Ensembl chr 7:99,184,673...99,255,978 		JBrowse link
G Arrb2 arrestin, beta 2 ISO RGD PMID:16304060 RGD:5133417 NCBI chr11:70,323,051...70,331,654
Ensembl chr11:70,323,461...70,331,654 		JBrowse link
G Gna11 guanine nucleotide binding protein, alpha 11 ISO RGD PMID:16141358 RGD:1581847 NCBI chr10:81,364,558...81,380,996
Ensembl chr10:81,364,558...81,381,024 		JBrowse link
G Gnaq guanine nucleotide binding protein, alpha q polypeptide ISO RGD PMID:16141358 RGD:1581847 NCBI chr19:16,110,048...16,365,884
Ensembl chr19:16,110,195...16,364,827 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:16304060 RGD:5133417 NCBI chr19:4,336,027...4,356,350
Ensembl chr19:4,336,029...4,356,250 		JBrowse link
G Grk3 G protein-coupled receptor kinase 3 ISO RGD PMID:16304060 RGD:5133417 NCBI chr 5:113,058,344...113,163,518
Ensembl chr 5:113,058,348...113,163,657 		JBrowse link
G Grk5 G protein-coupled receptor kinase 5 ISO RGD PMID:16304060 RGD:5133417 NCBI chr19:60,877,995...61,084,406
Ensembl chr19:60,878,187...61,084,406 		JBrowse link
G Grk6 G protein-coupled receptor kinase 6 ISO RGD PMID:16304060 RGD:5133417 NCBI chr13:55,592,865...55,608,740
Ensembl chr13:55,592,885...55,608,740 		JBrowse link
G Jak2 Janus kinase 2 ISO RGD PMID:9287353 PMID:9314843 RGD:5133683, RGD:6478796 NCBI chr19:29,229,006...29,290,495
Ensembl chr19:29,229,228...29,290,480 		JBrowse link
G Rgs2 regulator of G-protein signaling 2 ISO RGD PMID:12588881 RGD:5133418 NCBI chr 1:143,875,076...143,879,887
Ensembl chr 1:143,875,076...143,879,899 		JBrowse link
G Tyk2 tyrosine kinase 2 ISO RGD PMID:9314843 RGD:6478796 NCBI chr 9:21,015,364...21,042,689
Ensembl chr 9:21,015,364...21,042,539 		JBrowse link
angiotensin II signaling pathway via AT2 receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) TAS
ISO		 RGD PMID:16286564 PMID:22949090 PMID:16286568 RGD:1582434, RGD:7401256, RGD:1582435 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Agtr2 angiotensin II receptor, type 2 TAS
ISO		 RGD PMID:10977869 PMID:22949090 RGD:1581825, RGD:7401256 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403 		JBrowse link
G Cnksr1 connector enhancer of kinase suppressor of Ras 1 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 4:133,955,352...133,965,737
Ensembl chr 4:133,955,352...133,965,710 		JBrowse link
G Dusp1 dual specificity phosphatase 1 ISO RGD PMID:18804122 RGD:5133675 NCBI chr17:26,724,565...26,727,446
Ensembl chr17:26,724,564...26,781,102 		JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:20889352 RGD:5133679 NCBI chr10:128,403,392...128,425,504
Ensembl chr10:128,403,392...128,425,521 		JBrowse link
G Gnai2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 ISO RGD PMID:22949090 RGD:7401256 NCBI chr 9:107,491,324...107,512,542
Ensembl chr 9:107,491,324...107,512,566 		JBrowse link
G Gnai3 guanine nucleotide binding protein (G protein), alpha inhibiting 3 ISO RGD PMID:22949090 RGD:7401256 NCBI chr 3:108,014,591...108,053,468
Ensembl chr 3:108,014,596...108,053,462 		JBrowse link
G Mtus1 mitochondrial tumor suppressor 1 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 8:41,443,949...41,587,318
Ensembl chr 8:41,443,951...41,586,763 		JBrowse link
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 TAS RGD PMID:18804122 RGD:5133675 NCBI chr 6:124,697,670...124,715,672
Ensembl chr 6:124,697,670...124,715,677 		JBrowse link
G Slc9a6 solute carrier family 9 (sodium/hydrogen exchanger), member 6 ISO RGD PMID:20889352 RGD:5133679 NCBI chr  X:55,654,921...55,709,590
Ensembl chr  X:55,655,117...55,709,590 		JBrowse link
G Timp3 tissue inhibitor of metalloproteinase 3 ISO RGD PMID:20889352 RGD:5133679 NCBI chr10:86,136,276...86,185,369
Ensembl chr10:86,136,236...86,185,370 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
angiotensin III signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) ISO RGD PMID:11295571 RGD:1582124 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Agtr1a angiotensin II receptor, type 1a ISO RGD PMID:11295571 RGD:1582124 NCBI chr13:30,520,339...30,566,850
Ensembl chr13:30,520,424...30,566,850 		JBrowse link
G Agtr1b angiotensin II receptor, type 1b ISO RGD PMID:11295571 RGD:1582124 NCBI chr 3:20,368,637...20,421,341
Ensembl chr 3:20,368,637...20,421,341 		JBrowse link
G Agtr2 angiotensin II receptor, type 2 ISO RGD PMID:11295571 RGD:1582124 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403 		JBrowse link
G Aplnr apelin receptor ISO RGD PMID:11295571 RGD:1582124 NCBI chr 2:84,966,704...84,970,267
Ensembl chr 2:84,966,569...84,970,267 		JBrowse link
G Enpep glutamyl aminopeptidase ISO RGD PMID:16537183 RGD:1581649 NCBI chr 3:129,062,826...129,126,398
Ensembl chr 3:129,062,824...129,126,369 		JBrowse link
angiotensin III signaling pathway via AT1 receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) ISO RGD PMID:11100981 RGD:1582152 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Agtr1a angiotensin II receptor, type 1a ISO RGD PMID:11100981 RGD:1582152 NCBI chr13:30,520,339...30,566,850
Ensembl chr13:30,520,424...30,566,850 		JBrowse link
G Agtr1b angiotensin II receptor, type 1b ISO RGD PMID:11100981 RGD:1582152 NCBI chr 3:20,368,637...20,421,341
Ensembl chr 3:20,368,637...20,421,341 		JBrowse link
angiotensin III signaling pathway via AT2 receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) ISO RGD PMID:16380540 RGD:1582118 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Agtr2 angiotensin II receptor, type 2 ISO RGD PMID:16380540 RGD:1582118 NCBI chr  X:21,350,863...21,355,072
Ensembl chr  X:21,350,783...21,355,403 		JBrowse link
angiotensin IV signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) ISO RGD PMID:11282364 RGD:1582105 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Anpep alanyl (membrane) aminopeptidase ISO RGD PMID:16537183 RGD:1581649 NCBI chr 7:79,471,551...79,497,958
Ensembl chr 7:79,471,551...79,510,807 		JBrowse link
G Lnpep leucyl/cystinyl aminopeptidase ISO RGD PMID:12591177 RGD:1581864 NCBI chr17:17,747,985...17,846,303
Ensembl chr17:17,741,672...17,845,312 		JBrowse link
G Rnpep arginyl aminopeptidase (aminopeptidase B) ISO RGD PMID:16537183 RGD:1581649 NCBI chr 1:135,190,437...135,212,222
Ensembl chr 1:135,190,450...135,211,822 		JBrowse link
angiotensin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) ISS RGD PMID:12676165 RGD:1566511 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
atrial natriuretic peptide signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Corin corin, serine peptidase TAS RGD PMID:17485366 RGD:1626338 NCBI chr 5:72,457,291...72,661,883
Ensembl chr 5:72,457,368...72,661,816 		JBrowse link
G Nppa natriuretic peptide type A ISS
ISO		 RGD PMID:15758553 PMID:12608696 PMID:16010968 RGD:1578335, RGD:1626242, RGD:1580001 NCBI chr 4:148,085,179...148,086,531
Ensembl chr 4:148,085,179...148,086,536 		JBrowse link
G Npr1 natriuretic peptide receptor 1 ISO RGD PMID:7552344 RGD:1626243 NCBI chr 3:90,357,898...90,373,235
Ensembl chr 3:90,357,898...90,373,173 		JBrowse link
beta-barrel pathway of mitochondrial protein import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtx1 metaxin 1 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 3:89,116,388...89,121,214
Ensembl chr 3:89,116,388...89,134,395 		JBrowse link
G Mtx2 metaxin 2 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 2:74,656,156...74,707,092
Ensembl chr 2:74,656,147...74,708,775 		JBrowse link
G Samm50 SAMM50 sorting and assembly machinery component ISO RGD PMID:25305573 RGD:10412662 NCBI chr15:84,076,441...84,100,284
Ensembl chr15:84,076,442...84,101,468 		JBrowse link
G Timm10 translocase of inner mitochondrial membrane 10 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 2:84,657,365...84,660,557
Ensembl chr 2:84,657,341...84,660,557 		JBrowse link
G Timm13 translocase of inner mitochondrial membrane 13 ISO RGD PMID:25305573 RGD:10412662 NCBI chr10:80,735,284...80,736,803
Ensembl chr10:80,735,284...80,736,803 		JBrowse link
G Timm8a1 translocase of inner mitochondrial membrane 8A1 ISO RGD PMID:25305573 RGD:10412662 NCBI chr  X:133,438,005...133,442,419
Ensembl chr  X:133,438,005...133,442,614 		JBrowse link
G Timm8b translocase of inner mitochondrial membrane 8B ISO RGD PMID:25305573 RGD:10412662 NCBI chr 9:50,515,227...50,516,620
Ensembl chr 9:50,515,210...50,516,620 		JBrowse link
G Timm9 translocase of inner mitochondrial membrane 9 ISO RGD PMID:25305573 RGD:10412662 NCBI chr12:71,169,946...71,183,476
Ensembl chr12:71,169,947...71,183,458 		JBrowse link
G Tomm20 translocase of outer mitochondrial membrane 20 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 8:127,657,414...127,672,671
Ensembl chr 8:127,657,417...127,672,594 		JBrowse link
G Tomm22 translocase of outer mitochondrial membrane 22 ISO RGD PMID:25305573 RGD:10412662 NCBI chr15:79,555,069...79,557,063
Ensembl chr15:79,555,062...79,557,601 		JBrowse link
G Tomm40 translocase of outer mitochondrial membrane 40 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 7:19,435,238...19,449,370
Ensembl chr 7:19,435,238...19,449,363 		JBrowse link
G Tomm5 translocase of outer mitochondrial membrane 5 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 4:45,105,209...45,108,113
Ensembl chr 4:45,105,208...45,108,114 		JBrowse link
G Tomm6 translocase of outer mitochondrial membrane 6 ISO RGD PMID:25305573 RGD:10412662 NCBI chr17:47,997,570...47,999,311
Ensembl chr17:47,997,571...47,999,311 		JBrowse link
G Tomm7 translocase of outer mitochondrial membrane 7 ISO RGD PMID:25305573 RGD:10412662 NCBI chr 5:24,043,942...24,049,143
Ensembl chr 5:24,043,942...24,049,159 		JBrowse link
G Tomm70a translocase of outer mitochondrial membrane 70A ISO RGD PMID:25305573 RGD:10412662 NCBI chr16:56,942,077...56,974,893
Ensembl chr16:56,942,066...56,977,068 		JBrowse link
brain natriuretic peptide signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nppb natriuretic peptide type B ISO RGD PMID:7552344 RGD:1626243 NCBI chr 4:148,070,264...148,071,662
Ensembl chr 4:148,070,245...148,071,662 		JBrowse link
G Npr1 natriuretic peptide receptor 1 ISO RGD PMID:7552344 RGD:1626243 NCBI chr 3:90,357,898...90,373,235
Ensembl chr 3:90,357,898...90,373,173 		JBrowse link
C-type natriuretic peptide signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nppc natriuretic peptide type C ISO
TAS		 RGD PMID:15337698 PMID:16537417 RGD:1580149, RGD:1601488 NCBI chr 1:86,594,015...86,598,295
Ensembl chr 1:86,594,013...86,598,293 		JBrowse link
G Npr2 natriuretic peptide receptor 2 ISO RGD PMID:16537417 RGD:1601488 NCBI chr 4:43,629,015...43,651,437
Ensembl chr 4:43,631,935...43,651,244 		JBrowse link
G Npr3 natriuretic peptide receptor 3 ISS RGD PMID:15044621 RGD:1581459 NCBI chr15:11,839,982...11,907,287
Ensembl chr15:11,839,982...11,907,373 		JBrowse link
calcineurin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc2 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 ISO RGD PMID:15336966 RGD:1579951 NCBI chr 2:168,318,330...168,443,900
Ensembl chr 2:168,318,330...168,443,577 		JBrowse link
G Nfatc3 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 ISO RGD PMID:15336966 RGD:1579951 NCBI chr 8:106,785,450...106,857,169
Ensembl chr 8:106,785,472...106,857,169 		JBrowse link
G Nfatc4 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 4 ISO RGD PMID:15336966 RGD:1579951 NCBI chr14:56,062,252...56,071,400
Ensembl chr14:56,060,601...56,071,400 		JBrowse link
G Ppp3ca protein phosphatase 3, catalytic subunit, alpha isoform ISO RGD PMID:15336966 RGD:1579951 NCBI chr 3:136,375,778...136,643,488
Ensembl chr 3:136,375,885...136,643,488 		JBrowse link
G Ppp3cb protein phosphatase 3, catalytic subunit, beta isoform ISO RGD PMID:15336966 RGD:1579951 NCBI chr14:20,549,432...20,596,641
Ensembl chr14:20,549,432...20,596,641 		JBrowse link
G Ppp3cc protein phosphatase 3, catalytic subunit, gamma isoform ISO RGD PMID:15336966 RGD:1579951 NCBI chr14:70,455,314...70,526,979
Ensembl chr14:70,455,314...70,526,920 		JBrowse link
G Ppp3r1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) ISO RGD PMID:15336966 RGD:1579951 NCBI chr11:17,109,298...17,150,380
Ensembl chr11:17,109,263...17,150,375 		JBrowse link
G Ppp3r2 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II) ISO RGD PMID:15336966 RGD:1579951 NCBI chr 4:49,678,747...49,681,983
Ensembl chr 4:49,678,747...49,682,024 		JBrowse link
G Rcan1 regulator of calcineurin 1 IMP RGD PMID:16415348 RGD:1581652 NCBI chr16:92,188,839...92,263,057
Ensembl chr16:92,188,841...92,267,755 		JBrowse link
calcium signaling pathway via the calcium-sensing receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin, beta 1 ISO RGD PMID:15637145 PMID:22192592 RGD:7207060, RGD:7207059 NCBI chr 7:99,184,356...99,255,979
Ensembl chr 7:99,184,673...99,255,978 		JBrowse link
G Arrb2 arrestin, beta 2 ISO RGD PMID:15637145 PMID:22192592 RGD:7207060, RGD:7207059 NCBI chr11:70,323,051...70,331,654
Ensembl chr11:70,323,461...70,331,654 		JBrowse link
G Casr calcium-sensing receptor ISO RGD PMID:22192592 PMID:15637145 PMID:12239094 RGD:7207059, RGD:7207060, RGD:7207227 NCBI chr16:36,310,947...36,382,605
Ensembl chr16:36,314,058...36,382,503 		JBrowse link
G Flna filamin, alpha ISO RGD PMID:12239094 RGD:7207227 NCBI chr  X:73,267,067...73,293,787
Ensembl chr  X:73,267,067...73,293,426 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:15637145 RGD:7207060 NCBI chr19:4,336,027...4,356,350
Ensembl chr19:4,336,029...4,356,250 		JBrowse link
G Grk3 G protein-coupled receptor kinase 3 ISO RGD PMID:15637145 RGD:7207060 NCBI chr 5:113,058,344...113,163,518
Ensembl chr 5:113,058,348...113,163,657 		JBrowse link
G Grk4 G protein-coupled receptor kinase 4 ISO RGD PMID:15637145 RGD:7207060 NCBI chr 5:34,817,641...34,912,649
Ensembl chr 5:34,817,723...34,912,649 		JBrowse link
G Rgs12 regulator of G-protein signaling 12 ISO RGD PMID:12239094 RGD:7207227 NCBI chr 5:35,106,273...35,196,988
Ensembl chr 5:35,106,789...35,196,988 		JBrowse link
G Rgs2 regulator of G-protein signaling 2 ISO RGD PMID:12239094 RGD:7207227 NCBI chr 1:143,875,076...143,879,887
Ensembl chr 1:143,875,076...143,879,899 		JBrowse link
G Rgs4 regulator of G-protein signaling 4 ISO RGD PMID:12239094 RGD:7207227 NCBI chr 1:169,569,046...169,575,211
Ensembl chr 1:169,569,046...169,575,211 		JBrowse link
G Rgs5 regulator of G-protein signaling 5 ISO RGD PMID:21393447 RGD:7207228 NCBI chr 1:169,483,070...169,523,367
Ensembl chr 1:169,483,070...169,523,382 		JBrowse link
G Rhoa ras homolog family member A ISO RGD PMID:12239094 RGD:7207227 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133 		JBrowse link
calcium transport pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 7:126,045,032...126,062,245
Ensembl chr 7:126,045,030...126,062,280 		JBrowse link
G Atp2a2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 5:122,591,576...122,640,288
Ensembl chr 5:122,591,576...122,640,288 		JBrowse link
G Atp2a3 ATPase, Ca++ transporting, ubiquitous ISO RGD PMID:19789383 RGD:7204695 NCBI chr11:72,851,995...72,883,869
Ensembl chr11:72,851,995...72,883,870 		JBrowse link
G Atp2b1 ATPase, Ca++ transporting, plasma membrane 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chr10:98,750,243...98,862,005
Ensembl chr10:98,750,268...98,862,005 		JBrowse link
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574 		JBrowse link
G Atp2b3 ATPase, Ca++ transporting, plasma membrane 3 ISO RGD PMID:19789383 RGD:7204695 NCBI chr  X:72,546,356...72,632,267
Ensembl chr  X:72,546,692...72,614,611 		JBrowse link
G Atp2b4 ATPase, Ca++ transporting, plasma membrane 4 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 1:133,630,411...133,728,797
Ensembl chr 1:133,627,195...133,728,779 		JBrowse link
G Atp2c1 ATPase, Ca++-sequestering ISO RGD PMID:19789383 RGD:7204695 NCBI chr 9:105,288,561...105,398,456
Ensembl chr 9:105,280,738...105,404,518 		JBrowse link
G Atp2c2 ATPase, Ca++ transporting, type 2C, member 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 8:120,426,748...120,484,457
Ensembl chr 8:120,426,748...120,484,456 		JBrowse link
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875 		JBrowse link
G Cacna1b calcium channel, voltage-dependent, N type, alpha 1B subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 2:24,493,872...24,653,210
Ensembl chr 2:24,493,899...24,653,164 		JBrowse link
G Cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 6:118,564,201...119,174,345
Ensembl chr 6:118,564,201...119,173,851 		JBrowse link
G Cacna1d calcium channel, voltage-dependent, L type, alpha 1D subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr14:29,761,898...30,213,113
Ensembl chr14:29,761,896...30,213,412 		JBrowse link
G Cacna1e calcium channel, voltage-dependent, R type, alpha 1E subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 1:154,266,552...154,760,374
Ensembl chr 1:154,266,477...154,760,247 		JBrowse link
G Cacna1f calcium channel, voltage-dependent, alpha 1F subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr  X:7,473,342...7,501,435
Ensembl chr  X:7,473,322...7,501,435 		JBrowse link
G Cacna1g calcium channel, voltage-dependent, T type, alpha 1G subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr11:94,299,217...94,365,226
Ensembl chr11:94,299,217...94,365,024 		JBrowse link
G Cacna1h calcium channel, voltage-dependent, T type, alpha 1H subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr17:25,593,259...25,655,308
Ensembl chr17:25,593,259...25,652,757 		JBrowse link
G Cacna1i calcium channel, voltage-dependent, alpha 1I subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr15:80,171,439...80,282,493
Ensembl chr15:80,171,439...80,282,480 		JBrowse link
G Cacna1s calcium channel, voltage-dependent, L type, alpha 1S subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 1:135,980,549...136,047,268
Ensembl chr 1:135,980,488...136,047,560 		JBrowse link
G Cacnb1 calcium channel, voltage-dependent, beta 1 subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr11:97,892,339...97,913,860
Ensembl chr11:97,892,334...97,913,860 		JBrowse link
G Cacnb2 calcium channel, voltage-dependent, beta 2 subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 2:14,608,672...14,993,622
Ensembl chr 2:14,607,899...14,992,719 		JBrowse link
G Cacnb3 calcium channel, voltage-dependent, beta 3 subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr15:98,526,317...98,542,410
Ensembl chr15:98,528,721...98,542,410 		JBrowse link
G Cacnb4 calcium channel, voltage-dependent, beta 4 subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 2:52,318,332...52,566,816
Ensembl chr 2:52,318,332...52,566,843 		JBrowse link
G Cnga1 cyclic nucleotide gated channel alpha 1 ISO RGD PMID:12087135 RGD:6893549 NCBI chr 5:72,761,039...72,800,095
Ensembl chr 5:72,761,039...72,801,618 		JBrowse link
G Cnga2 cyclic nucleotide gated channel alpha 2 ISO RGD PMID:12087135 RGD:6893549 NCBI chr  X:71,035,455...71,053,824
Ensembl chr  X:71,035,455...71,053,824 		JBrowse link
G Cnga3 cyclic nucleotide gated channel alpha 3 ISO RGD PMID:12087135 RGD:6893549 NCBI chr 1:37,257,317...37,302,465
Ensembl chr 1:37,253,515...37,302,465 		JBrowse link
G Cnga4 cyclic nucleotide gated channel alpha 4 ISO RGD PMID:12087135 RGD:6893549 NCBI chr 7:105,049,247...105,057,981
Ensembl chr 7:105,053,775...105,057,949 		JBrowse link
G Cngb1 cyclic nucleotide gated channel beta 1 ISO RGD PMID:12087135 RGD:6893549 NCBI chr 8:95,965,671...96,033,213
Ensembl chr 8:95,965,673...96,033,213 		JBrowse link
G Cngb3 cyclic nucleotide gated channel beta 3 TAS RGD PMID:12087135 RGD:6893549 NCBI chr 4:19,280,850...19,510,623
Ensembl chr 4:19,280,850...19,510,623 		JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor 1 ISO RGD PMID:19133301 RGD:7204693 NCBI chr 6:108,190,044...108,528,077
Ensembl chr 6:108,190,057...108,528,070 		JBrowse link
G Itpr2 inositol 1,4,5-triphosphate receptor 2 ISO RGD PMID:19133301 RGD:7204693 NCBI chr 6:146,009,797...146,403,757
Ensembl chr 6:146,009,797...146,403,721 		JBrowse link
G Itpr3 inositol 1,4,5-triphosphate receptor 3 ISO RGD PMID:19133301 RGD:7204693 NCBI chr17:27,275,976...27,341,197
Ensembl chr17:27,276,278...27,341,197 		JBrowse link
G Mcoln1 mucolipin 1 ISO RGD PMID:20716668 RGD:7204689 NCBI chr 8:3,550,458...3,565,232
Ensembl chr 8:3,550,457...3,565,232 		JBrowse link
G Mcu mitochondrial calcium uniporter ISO RGD PMID:22850819 RGD:7204696 NCBI chr10:59,282,806...59,453,231
Ensembl chr10:59,282,806...59,452,514 		JBrowse link
G Orai1 ORAI calcium release-activated calcium modulator 1 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 5:123,153,078...123,168,515
Ensembl chr 5:123,153,137...123,168,519 		JBrowse link
G Orai2 ORAI calcium release-activated calcium modulator 2 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 5:136,176,310...136,201,418
Ensembl chr 5:136,176,313...136,199,567 		JBrowse link
G Orai3 ORAI calcium release-activated calcium modulator 3 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 7:127,368,987...127,374,322
Ensembl chr 7:127,368,987...127,374,322 		JBrowse link
G Ryr1 ryanodine receptor 1, skeletal muscle ISO RGD PMID:20961976 RGD:7204694 NCBI chr 7:28,702,765...28,824,599
Ensembl chr 7:28,702,769...28,824,604 		JBrowse link
G Ryr2 ryanodine receptor 2, cardiac ISO RGD PMID:20961976 RGD:7204694 NCBI chr13:11,567,985...12,121,831
Ensembl chr13:11,567,988...12,121,831 		JBrowse link
G Ryr3 ryanodine receptor 3 ISO RGD PMID:20961976 RGD:7204694 NCBI chr 2:112,461,699...113,047,755
Ensembl chr 2:112,461,700...113,047,441 		JBrowse link
G Slc24a1 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 9:64,830,143...64,858,902
Ensembl chr 9:64,830,143...64,858,889 		JBrowse link
G Slc24a2 solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 4:86,901,361...87,148,780
Ensembl chr 4:86,901,361...87,148,714 		JBrowse link
G Slc24a3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 2:145,009,695...145,484,086
Ensembl chr 2:145,009,674...145,484,086 		JBrowse link
G Slc24a4 solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 ISO RGD PMID:17716241 RGD:7204698 NCBI chr12:102,094,986...102,239,562
Ensembl chr12:102,094,992...102,233,350 		JBrowse link
G Slc24a5 solute carrier family 24, member 5 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 2:124,910,076...124,930,316
Ensembl chr 2:124,910,044...124,930,597 		JBrowse link
G Slc8a1 solute carrier family 8 (sodium/calcium exchanger), member 1 ISO RGD PMID:17716241 RGD:7204698 NCBI chr17:81,680,534...82,045,816
Ensembl chr17:81,680,534...82,045,806 		JBrowse link
G Slc8a2 solute carrier family 8 (sodium/calcium exchanger), member 2 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 7:15,861,540...15,894,988
Ensembl chr 7:15,863,751...15,894,988 		JBrowse link
G Slc8a3 solute carrier family 8 (sodium/calcium exchanger), member 3 ISO RGD PMID:17716241 RGD:7204698 NCBI chr12:81,244,689...81,380,506
Ensembl chr12:81,244,689...81,379,954 		JBrowse link
G Slc8b1 solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 ISO RGD PMID:22850819 RGD:7204696 NCBI chr 5:120,649,233...120,672,089
Ensembl chr 5:120,649,233...120,672,089 		JBrowse link
G Stim1 stromal interaction molecule 1 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 7:101,909,279...102,086,525
Ensembl chr 7:101,917,013...102,086,526 		JBrowse link
G Stim2 stromal interaction molecule 2 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 5:54,155,865...54,278,399
Ensembl chr 5:54,155,841...54,278,399 		JBrowse link
G Tpcn1 two pore channel 1 ISO RGD PMID:20018950 RGD:7204697 NCBI chr 5:120,672,222...120,726,731
Ensembl chr 5:120,672,218...120,726,738 		JBrowse link
G Tpcn2 two pore segment channel 2 ISO RGD PMID:20018950 RGD:7204697 NCBI chr 7:144,735,370...144,837,743
Ensembl chr 7:144,740,261...144,837,748 		JBrowse link
G Trpv5 transient receptor potential cation channel, subfamily V, member 5 ISO RGD PMID:20716668 RGD:7204689 NCBI chr 6:41,628,595...41,658,158
Ensembl chr 6:41,629,107...41,657,703 		JBrowse link
G Trpv6 transient receptor potential cation channel, subfamily V, member 6 ISO RGD PMID:20716668 RGD:7204689 NCBI chr 6:41,597,553...41,613,339
Ensembl chr 6:41,597,558...41,613,339 		JBrowse link
calcium/calcium-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 1700001C19Rik RIKEN cDNA 1700001C19 gene ISO RGD PMID:20668007 RGD:7204681 NCBI chr17:47,723,659...47,748,690
Ensembl chr17:47,723,659...47,748,301 		JBrowse link
G Atp2a1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 7:126,045,032...126,062,245
Ensembl chr 7:126,045,030...126,062,280 		JBrowse link
G Atp2a2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 5:122,591,576...122,640,288
Ensembl chr 5:122,591,576...122,640,288 		JBrowse link
G Atp2a3 ATPase, Ca++ transporting, ubiquitous ISO RGD PMID:19789383 RGD:7204695 NCBI chr11:72,851,995...72,883,869
Ensembl chr11:72,851,995...72,883,870 		JBrowse link
G Atp2b1 ATPase, Ca++ transporting, plasma membrane 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chr10:98,750,243...98,862,005
Ensembl chr10:98,750,268...98,862,005 		JBrowse link
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574 		JBrowse link
G Atp2b3 ATPase, Ca++ transporting, plasma membrane 3 ISO RGD PMID:19789383 RGD:7204695 NCBI chr  X:72,546,356...72,632,267
Ensembl chr  X:72,546,692...72,614,611 		JBrowse link
G Atp2b4 ATPase, Ca++ transporting, plasma membrane 4 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 1:133,630,411...133,728,797
Ensembl chr 1:133,627,195...133,728,779 		JBrowse link
G Atp2c1 ATPase, Ca++-sequestering ISO RGD PMID:19789383 RGD:7204695 NCBI chr 9:105,288,561...105,398,456
Ensembl chr 9:105,280,738...105,404,518 		JBrowse link
G Atp2c2 ATPase, Ca++ transporting, type 2C, member 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chr 8:120,426,748...120,484,457
Ensembl chr 8:120,426,748...120,484,456 		JBrowse link
G Cabp1 calcium binding protein 1 ISO RGD PMID:20668007 RGD:7204681 NCBI chr 5:115,306,750...115,332,440
Ensembl chr 5:115,306,748...115,332,440 		JBrowse link
G Cabp2 calcium binding protein 2 ISO RGD PMID:20668007 RGD:7204681 NCBI chr19:4,131,469...4,137,340
Ensembl chr19:4,131,578...4,137,340 		JBrowse link
G Cabp4 calcium binding protein 4 ISO RGD PMID:20668007 RGD:7204681 NCBI chr19:4,185,422...4,189,608
Ensembl chr19:4,185,422...4,194,032 		JBrowse link
G Cacna1a calcium channel, voltage-dependent, P/Q type, alpha 1A subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 8:85,065,257...85,366,880
Ensembl chr 8:85,065,268...85,366,875 		JBrowse link
G Cacna1b calcium channel, voltage-dependent, N type, alpha 1B subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 2:24,493,872...24,653,210
Ensembl chr 2:24,493,899...24,653,164 		JBrowse link
G Cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 6:118,564,201...119,174,345
Ensembl chr 6:118,564,201...119,173,851 		JBrowse link
G Cacna1d calcium channel, voltage-dependent, L type, alpha 1D subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr14:29,761,898...30,213,113
Ensembl chr14:29,761,896...30,213,412 		JBrowse link
G Cacna1e calcium channel, voltage-dependent, R type, alpha 1E subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 1:154,266,552...154,760,374
Ensembl chr 1:154,266,477...154,760,247 		JBrowse link
G Cacna1f calcium channel, voltage-dependent, alpha 1F subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr  X:7,473,342...7,501,435
Ensembl chr  X:7,473,322...7,501,435 		JBrowse link
G Cacna1g calcium channel, voltage-dependent, T type, alpha 1G subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr11:94,299,217...94,365,226
Ensembl chr11:94,299,217...94,365,024 		JBrowse link
G Cacna1h calcium channel, voltage-dependent, T type, alpha 1H subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr17:25,593,259...25,655,308
Ensembl chr17:25,593,259...25,652,757 		JBrowse link
G Cacna1i calcium channel, voltage-dependent, alpha 1I subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr15:80,171,439...80,282,493
Ensembl chr15:80,171,439...80,282,480 		JBrowse link
G Cacna1s calcium channel, voltage-dependent, L type, alpha 1S subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 1:135,980,549...136,047,268
Ensembl chr 1:135,980,488...136,047,560 		JBrowse link
G Cacnb1 calcium channel, voltage-dependent, beta 1 subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr11:97,892,339...97,913,860
Ensembl chr11:97,892,334...97,913,860 		JBrowse link
G Cacnb2 calcium channel, voltage-dependent, beta 2 subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 2:14,608,672...14,993,622
Ensembl chr 2:14,607,899...14,992,719 		JBrowse link
G Cacnb3 calcium channel, voltage-dependent, beta 3 subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr15:98,526,317...98,542,410
Ensembl chr15:98,528,721...98,542,410 		JBrowse link
G Cacnb4 calcium channel, voltage-dependent, beta 4 subunit ISO RGD PMID:21746798 RGD:7204688 NCBI chr 2:52,318,332...52,566,816
Ensembl chr 2:52,318,332...52,566,843 		JBrowse link
G Calb1 calbindin 1 ISO RGD PMID:20943758 RGD:7204685 NCBI chr 4:15,881,264...15,906,709
Ensembl chr 4:15,881,264...15,908,064 		JBrowse link
G Calb2 calbindin 2 ISO RGD PMID:20943758 RGD:7204685 NCBI chr 8:110,869,158...110,894,844
Ensembl chr 8:110,864,134...110,894,842 		JBrowse link
G Calm1 calmodulin 1 ISO RGD PMID:10884684 PMID:18083096 RGD:7204676, RGD:7204677 NCBI chr12:100,165,694...100,176,083
Ensembl chr12:100,165,694...100,176,073 		JBrowse link
G Calm2 calmodulin 2 ISO RGD PMID:10884684 PMID:18083096 RGD:7204676, RGD:7204677 NCBI chr17:87,740,829...87,754,363
Ensembl chr17:87,740,840...87,754,363 		JBrowse link
G Calm3 calmodulin 3 ISO RGD PMID:10884684 PMID:18083096 RGD:7204676, RGD:7204677 NCBI chr 7:16,649,304...16,657,957
Ensembl chr 7:16,649,304...16,658,039 		JBrowse link
G Calr calreticulin ISO RGD PMID:20356453 RGD:7204686 NCBI chr 8:85,568,717...85,573,560
Ensembl chr 8:85,568,479...85,573,563 		JBrowse link
G Casq1 calsequestrin 1 ISO RGD PMID:20356453 RGD:7204686 NCBI chr 1:172,037,461...172,047,462
Ensembl chr 1:172,037,461...172,047,435 		JBrowse link
G Casq2 calsequestrin 2 ISO RGD PMID:20356453 RGD:7204686 NCBI chr 3:101,993,731...102,053,830
Ensembl chr 3:101,993,731...102,053,830 		JBrowse link
G Cnga1 cyclic nucleotide gated channel alpha 1 ISO RGD PMID:22435804 RGD:7204690 NCBI chr 5:72,761,039...72,800,095
Ensembl chr 5:72,761,039...72,801,618 		JBrowse link
G Cnga2 cyclic nucleotide gated channel alpha 2 ISO RGD PMID:22435804 RGD:7204690 NCBI chr  X:71,035,455...71,053,824
Ensembl chr  X:71,035,455...71,053,824 		JBrowse link
G Cnga3 cyclic nucleotide gated channel alpha 3 ISO RGD PMID:22435804 RGD:7204690 NCBI chr 1:37,257,317...37,302,465
Ensembl chr 1:37,253,515...37,302,465 		JBrowse link
G Cnga4 cyclic nucleotide gated channel alpha 4 ISO RGD PMID:22435804 RGD:7204690 NCBI chr 7:105,049,247...105,057,981
Ensembl chr 7:105,053,775...105,057,949 		JBrowse link
G Cngb1 cyclic nucleotide gated channel beta 1 ISO RGD PMID:22435804 RGD:7204690 NCBI chr 8:95,965,671...96,033,213
Ensembl chr 8:95,965,673...96,033,213 		JBrowse link
G Cngb3 cyclic nucleotide gated channel beta 3 ISO RGD PMID:22435804 RGD:7204690 NCBI chr 4:19,280,850...19,510,623
Ensembl chr 4:19,280,850...19,510,623 		JBrowse link
G Guca1a guanylate cyclase activator 1a (retina) ISO RGD PMID:20668007 RGD:7204681 NCBI chr17:47,705,482...47,724,439
Ensembl chr17:47,705,483...47,711,509 		JBrowse link
G Guca1b guanylate cyclase activator 1B ISO RGD PMID:20668007 RGD:7204681 NCBI chr17:47,692,526...47,703,892
Ensembl chr17:47,696,318...47,703,892 		JBrowse link
G Guca2b guanylate cyclase activator 2b (retina) ISO RGD PMID:20668007 RGD:7204681 NCBI chr 4:119,513,798...119,516,142
Ensembl chr 4:119,513,804...119,516,151 		JBrowse link
G Itpr1 inositol 1,4,5-trisphosphate receptor 1 ISO RGD PMID:19133301 RGD:7204693 NCBI chr 6:108,190,044...108,528,077
Ensembl chr 6:108,190,057...108,528,070 		JBrowse link
G Itpr2 inositol 1,4,5-triphosphate receptor 2 ISO RGD PMID:19133301 RGD:7204693 NCBI chr 6:146,009,797...146,403,757
Ensembl chr 6:146,009,797...146,403,721 		JBrowse link
G Itpr3 inositol 1,4,5-triphosphate receptor 3 ISO RGD PMID:19133301 RGD:7204693 NCBI chr17:27,275,976...27,341,197
Ensembl chr17:27,276,278...27,341,197 		JBrowse link
G Kcnip1 Kv channel-interacting protein 1 ISO RGD PMID:20668007 RGD:7204681 NCBI chr11:33,579,339...33,943,854
Ensembl chr11:33,579,339...33,943,152 		JBrowse link
G Kcnip2 Kv channel-interacting protein 2 ISO RGD PMID:20668007 RGD:7204681 NCBI chr19:45,780,785...45,804,948
Ensembl chr19:45,780,278...45,804,500 		JBrowse link
G Kcnip3 Kv channel interacting protein 3, calsenilin ISO RGD PMID:20668007 RGD:7204681 NCBI chr 2:127,298,418...127,364,014
Ensembl chr 2:127,298,418...127,364,014 		JBrowse link
G Kcnip4 Kv channel interacting protein 4 ISO RGD PMID:20668007 RGD:7204681 NCBI chr 5:48,546,845...49,682,464
Ensembl chr 5:48,546,844...49,682,249 		JBrowse link
G Kcnn1 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1 ISO RGD PMID:21942705 RGD:7204683 NCBI chr 8:71,295,802...71,318,335
Ensembl chr 8:71,294,693...71,315,902 		JBrowse link
G Kcnn2 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 ISO RGD PMID:21942705 RGD:7204683 NCBI chr18:45,401,754...45,818,954
Ensembl chr18:45,401,927...45,819,091 		JBrowse link
G Kcnn3 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 ISO RGD PMID:21942705 RGD:7204683 NCBI chr 3:89,427,471...89,579,801
Ensembl chr 3:89,427,471...89,582,439 		JBrowse link
G Kcnn4 potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 ISO RGD PMID:21942705 RGD:7204683 NCBI chr 7:24,069,750...24,084,635
Ensembl chr 7:24,069,688...24,086,115 		JBrowse link
G Mcoln1 mucolipin 1 ISO RGD PMID:20716668 RGD:7204689 NCBI chr 8:3,550,458...3,565,232
Ensembl chr 8:3,550,457...3,565,232 		JBrowse link
G Mcu mitochondrial calcium uniporter ISO RGD PMID:22850819 RGD:7204696 NCBI chr10:59,282,806...59,453,231
Ensembl chr10:59,282,806...59,452,514 		JBrowse link
G Ncs1 neuronal calcium sensor 1 ISO RGD PMID:20668007 RGD:7204681 NCBI chr 2:31,135,766...31,186,001
Ensembl chr 2:31,135,835...31,186,001 		JBrowse link
G Ocm oncomodulin ISO RGD PMID:20943758 RGD:7204685 NCBI chr 5:143,956,615...143,987,691
Ensembl chr 5:143,956,622...143,963,488 		JBrowse link
G Orai1 ORAI calcium release-activated calcium modulator 1 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 5:123,153,078...123,168,515
Ensembl chr 5:123,153,137...123,168,519 		JBrowse link
G Orai2 ORAI calcium release-activated calcium modulator 2 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 5:136,176,310...136,201,418
Ensembl chr 5:136,176,313...136,199,567 		JBrowse link
G Orai3 ORAI calcium release-activated calcium modulator 3 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 7:127,368,987...127,374,322
Ensembl chr 7:127,368,987...127,374,322 		JBrowse link
G Pvalb parvalbumin ISO RGD PMID:20943758 RGD:7204685 NCBI chr15:78,075,312...78,090,600
Ensembl chr15:78,075,314...78,090,600 		JBrowse link
G Rcvrn recoverin ISO RGD PMID:20668007 RGD:7204681 NCBI chr11:67,586,152...67,594,181
Ensembl chr11:67,586,152...67,594,159 		JBrowse link
G Ryr1 ryanodine receptor 1, skeletal muscle ISO RGD PMID:20961976 RGD:7204694 NCBI chr 7:28,702,765...28,824,599
Ensembl chr 7:28,702,769...28,824,604 		JBrowse link
G Ryr2 ryanodine receptor 2, cardiac ISO RGD PMID:20961976 RGD:7204694 NCBI chr13:11,567,985...12,121,831
Ensembl chr13:11,567,988...12,121,831 		JBrowse link
G Ryr3 ryanodine receptor 3 ISO RGD PMID:20961976 RGD:7204694 NCBI chr 2:112,461,699...113,047,755
Ensembl chr 2:112,461,700...113,047,441 		JBrowse link
G S100a1 S100 calcium binding protein A1 ISO RGD PMID:16129693 PMID:17964289 RGD:1579960, RGD:7204682 NCBI chr 3:90,418,341...90,421,637
Ensembl chr 3:90,418,341...90,421,699 		JBrowse link
G S100a4 S100 calcium binding protein A4 ISO RGD PMID:17964289 RGD:7204682 NCBI chr 3:90,511,077...90,513,349
Ensembl chr 3:90,511,078...90,513,352 		JBrowse link
G S100b S100 protein, beta polypeptide, neural ISO RGD PMID:17964289 RGD:7204682 NCBI chr10:76,089,670...76,097,153
Ensembl chr10:76,089,687...76,096,993 		JBrowse link
G S100g S100 calcium binding protein G ISO RGD PMID:20943758 RGD:7204685 NCBI chr  X:161,744,988...161,747,595
Ensembl chr  X:161,744,988...161,747,595 		JBrowse link
G Slc24a1 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 9:64,830,143...64,858,902
Ensembl chr 9:64,830,143...64,858,889 		JBrowse link
G Slc24a2 solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 4:86,901,361...87,148,780
Ensembl chr 4:86,901,361...87,148,714 		JBrowse link
G Slc24a3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 2:145,009,695...145,484,086
Ensembl chr 2:145,009,674...145,484,086 		JBrowse link
G Slc24a4 solute carrier family 24 (sodium/potassium/calcium exchanger), member 4 ISO RGD PMID:17716241 RGD:7204698 NCBI chr12:102,094,986...102,239,562
Ensembl chr12:102,094,992...102,233,350 		JBrowse link
G Slc24a5 solute carrier family 24, member 5 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 2:124,910,076...124,930,316
Ensembl chr 2:124,910,044...124,930,597 		JBrowse link
G Slc8a1 solute carrier family 8 (sodium/calcium exchanger), member 1 ISO RGD PMID:17716241 RGD:7204698 NCBI chr17:81,680,534...82,045,816
Ensembl chr17:81,680,534...82,045,806 		JBrowse link
G Slc8a2 solute carrier family 8 (sodium/calcium exchanger), member 2 ISO RGD PMID:17716241 RGD:7204698 NCBI chr 7:15,861,540...15,894,988
Ensembl chr 7:15,863,751...15,894,988 		JBrowse link
G Slc8a3 solute carrier family 8 (sodium/calcium exchanger), member 3 ISO RGD PMID:17716241 RGD:7204698 NCBI chr12:81,244,689...81,380,506
Ensembl chr12:81,244,689...81,379,954 		JBrowse link
G Slc8b1 solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 ISO RGD PMID:22850819 RGD:7204696 NCBI chr 5:120,649,233...120,672,089
Ensembl chr 5:120,649,233...120,672,089 		JBrowse link
G Stim1 stromal interaction molecule 1 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 7:101,909,279...102,086,525
Ensembl chr 7:101,917,013...102,086,526 		JBrowse link
G Stim2 stromal interaction molecule 2 ISO RGD PMID:22914293 RGD:7204692 NCBI chr 5:54,155,865...54,278,399
Ensembl chr 5:54,155,841...54,278,399 		JBrowse link
G Syt1 synaptotagmin I ISO RGD PMID:15534041 PMID:11751925 RGD:7204679, RGD:2311146 NCBI chr10:108,333,511...108,846,852
Ensembl chr10:108,333,511...108,846,843 		JBrowse link
G Syt7 synaptotagmin VII ISO RGD PMID:15534041 PMID:18713958 RGD:7204679, RGD:2311148 NCBI chr19:10,366,142...10,430,545
Ensembl chr19:10,366,454...10,430,544 		JBrowse link
G Syt9 synaptotagmin IX ISO RGD PMID:18713958 PMID:11751925 RGD:2311148, RGD:2311146 NCBI chr 7:106,969,929...107,147,863
Ensembl chr 7:106,969,935...107,147,863 		JBrowse link
G Tnnc1 troponin C, cardiac/slow skeletal ISO RGD PMID:17964289 RGD:7204682 NCBI chr14:30,930,274...30,933,671
Ensembl chr14:30,930,269...30,933,686 		JBrowse link
G Tnnc2 troponin C2, fast ISO RGD PMID:17964289 RGD:7204682 NCBI chr 2:164,619,081...164,621,654
Ensembl chr 2:164,619,081...164,621,887 		JBrowse link
G Tpcn1 two pore channel 1 ISO RGD PMID:20018950 RGD:7204697 NCBI chr 5:120,672,222...120,726,731
Ensembl chr 5:120,672,218...120,726,738 		JBrowse link
G Tpcn2 two pore segment channel 2 ISO RGD PMID:20018950 RGD:7204697 NCBI chr 7:144,735,370...144,837,743
Ensembl chr 7:144,740,261...144,837,748 		JBrowse link
G Trpv5 transient receptor potential cation channel, subfamily V, member 5 ISO RGD PMID:20716668 RGD:7204689 NCBI chr 6:41,628,595...41,658,158
Ensembl chr 6:41,629,107...41,657,703 		JBrowse link
G Trpv6 transient receptor potential cation channel, subfamily V, member 6 ISO RGD PMID:20716668 RGD:7204689 NCBI chr 6:41,597,553...41,613,339
Ensembl chr 6:41,597,558...41,613,339 		JBrowse link
calcium/calmodulin dependent kinase 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium channel, voltage-dependent, L type, alpha 1C subunit ISO RGD PMID:23091085 RGD:7240708 NCBI chr 6:118,564,201...119,174,345
Ensembl chr 6:118,564,201...119,173,851 		JBrowse link
G Cacnb2 calcium channel, voltage-dependent, beta 2 subunit ISO RGD PMID:23091085 RGD:7240708 NCBI chr 2:14,608,672...14,993,622
Ensembl chr 2:14,607,899...14,992,719 		JBrowse link
G Cacng2 calcium channel, voltage-dependent, gamma subunit 2 ISO RGD PMID:22334212 RGD:7240704 NCBI chr15:77,876,119...78,004,420
Ensembl chr15:77,875,948...78,004,228 		JBrowse link
G Calm1 calmodulin 1 ISO RGD PMID:22717267 PMID:23091085 RGD:7240705, RGD:7240708 NCBI chr12:100,165,694...100,176,083
Ensembl chr12:100,165,694...100,176,073 		JBrowse link
G Calm2 calmodulin 2 ISO RGD PMID:22717267 PMID:23091085 RGD:7240705, RGD:7240708 NCBI chr17:87,740,829...87,754,363
Ensembl chr17:87,740,840...87,754,363 		JBrowse link
G Calm3 calmodulin 3 ISO RGD PMID:22717267 PMID:23091085 RGD:7240705, RGD:7240708 NCBI chr 7:16,649,304...16,657,957
Ensembl chr 7:16,649,304...16,658,039 		JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha ISO RGD PMID:22334212 PMID:22717267 RGD:7240704, RGD:7240705 NCBI chr18:61,058,704...61,121,224
Ensembl chr18:61,058,690...61,121,224 		JBrowse link
G Camk2b calcium/calmodulin-dependent protein kinase II, beta ISO RGD PMID:22334212 PMID:22717267 RGD:7240704, RGD:7240705 NCBI chr11:5,919,642...6,016,401
Ensembl chr11:5,919,644...6,016,362 		JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II, delta ISO RGD PMID:22717267 PMID:23091085 RGD:7240705, RGD:7240708 NCBI chr 3:126,389,136...126,639,975
Ensembl chr 3:126,389,951...126,639,975 		JBrowse link
G Camk2g calcium/calmodulin-dependent protein kinase II gamma ISO RGD PMID:22717267 RGD:7240705 NCBI chr14:20,784,941...20,844,225
Ensembl chr14:20,784,943...20,844,156 		JBrowse link
G Camk2n1 calcium/calmodulin-dependent protein kinase II inhibitor 1 ISO RGD PMID:21070840 PMID:21301225 RGD:7240706, RGD:7240707 NCBI chr 4:138,182,459...138,187,437
Ensembl chr 4:138,181,625...138,187,434 		JBrowse link
G Camk2n2 calcium/calmodulin-dependent protein kinase II inhibitor 2 ISO RGD PMID:21070840 PMID:21301225 RGD:7240706, RGD:7240707 NCBI chr16:20,437,965...20,440,028
Ensembl chr16:20,437,965...20,440,037 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 ISO RGD PMID:22717267 RGD:7240705 NCBI chr16:31,482,261...31,692,174
Ensembl chr16:31,482,261...31,693,947 		JBrowse link
G Gria1 glutamate receptor, ionotropic, AMPA1 (alpha 1) ISO RGD PMID:22334212 RGD:7240704 NCBI chr11:56,902,342...57,221,070
Ensembl chr11:56,902,213...57,221,070 		JBrowse link
G Grin1 glutamate receptor, ionotropic, NMDA1 (zeta 1) ISO RGD PMID:22717267 RGD:7240705 NCBI chr 2:25,181,189...25,209,199
Ensembl chr 2:25,181,193...25,209,199 		JBrowse link
G Grin2a glutamate receptor, ionotropic, NMDA2A (epsilon 1) ISO RGD PMID:22717267 RGD:7240705 NCBI chr16:9,385,765...9,813,744
Ensembl chr16:9,385,762...9,813,424 		JBrowse link
G Grin2b glutamate receptor, ionotropic, NMDA2B (epsilon 2) ISO RGD PMID:22334212 PMID:22717267 RGD:7240704, RGD:7240705 NCBI chr 6:135,690,219...136,150,658
Ensembl chr 6:135,690,231...136,150,509 		JBrowse link
G Hdac4 histone deacetylase 4 ISO RGD PMID:21255680 RGD:7241019 NCBI chr 1:91,856,501...92,123,424
Ensembl chr 1:91,856,501...92,123,421 		JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:21255680 RGD:7241019 NCBI chr11:102,085,244...102,120,968
Ensembl chr11:102,085,258...102,120,992 		JBrowse link
G Lrrc7 leucine rich repeat containing 7 ISO RGD PMID:22717267 RGD:7240705 NCBI chr 3:157,772,823...158,268,254
Ensembl chr 3:157,788,528...158,267,858 		JBrowse link
G Pln phospholamban ISO RGD PMID:23091085 RGD:7240708 NCBI chr10:53,213,782...53,222,095
Ensembl chr10:53,213,763...53,222,083 		JBrowse link
G Ppm1e protein phosphatase 1E (PP2C domain containing) ISO RGD PMID:18454172 RGD:7241020 NCBI chr11:87,117,724...87,249,884
Ensembl chr11:87,117,732...87,249,849 		JBrowse link
G Ppm1f protein phosphatase 1F (PP2C domain containing) ISO RGD PMID:18454172 RGD:7241020 NCBI chr16:16,714,314...16,745,239
Ensembl chr16:16,714,333...16,745,228 		JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma ISO RGD PMID:18454172 RGD:7241020 NCBI chr 5:122,296,297...122,313,336
Ensembl chr 5:122,296,341...122,313,336 		JBrowse link
G Ppp2ca protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform ISO RGD PMID:18454172 RGD:7241020 NCBI chr11:51,989,651...52,013,576
Ensembl chr11:51,989,508...52,018,605 		JBrowse link
G Ryr2 ryanodine receptor 2, cardiac ISO RGD PMID:23091085 RGD:7240708 NCBI chr13:11,567,985...12,121,831
Ensembl chr13:11,567,988...12,121,831 		JBrowse link
G Scn5a sodium channel, voltage-gated, type V, alpha ISO RGD PMID:23091085 RGD:7240708 NCBI chr 9:119,312,470...119,408,096
Ensembl chr 9:119,312,474...119,408,082 		JBrowse link
G Syngap1 synaptic Ras GTPase activating protein 1 homolog (rat) ISO RGD PMID:22717267 RGD:7240705 NCBI chr17:27,160,186...27,191,408
Ensembl chr17:27,160,227...27,191,408 		JBrowse link
calcium/calmodulin dependent kinase signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ednrb endothelin receptor type B ISO RGD PMID:15245872 RGD:1581866 NCBI chr14:104,052,051...104,083,248
Ensembl chr14:104,052,061...104,081,838 		JBrowse link
carrier pathway of mitochondrial protein import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Timm10 translocase of inner mitochondrial membrane 10 ISO RGD PMID:14726512 RGD:10412667 NCBI chr 2:84,657,365...84,660,557
Ensembl chr 2:84,657,341...84,660,557 		JBrowse link
G Timm10b translocase of inner mitochondrial membrane 10B ISO RGD PMID:14726512 RGD:10412667 NCBI chr 7:105,289,652...105,304,955
Ensembl chr 7:105,289,263...105,292,844
Ensembl chr 7:105,289,263...105,292,844 		JBrowse link
G Timm22 translocase of inner mitochondrial membrane 22 ISO RGD PMID:14726512 RGD:10412667 NCBI chr11:76,297,751...76,307,139
Ensembl chr11:76,297,778...76,307,118 		JBrowse link
G Timm9 translocase of inner mitochondrial membrane 9 ISO RGD PMID:14726512 RGD:10412667 NCBI chr12:71,169,946...71,183,476
Ensembl chr12:71,169,947...71,183,458 		JBrowse link
G Tomm20 translocase of outer mitochondrial membrane 20 ISO RGD PMID:25980382 RGD:10412661 NCBI chr 8:127,657,414...127,672,671
Ensembl chr 8:127,657,417...127,672,594 		JBrowse link
G Tomm22 translocase of outer mitochondrial membrane 22 ISO RGD PMID:25980382 RGD:10412661 NCBI chr15:79,555,069...79,557,063
Ensembl chr15:79,555,062...79,557,601 		JBrowse link
G Tomm40 translocase of outer mitochondrial membrane 40 ISO RGD PMID:25980382 RGD:10412661 NCBI chr 7:19,435,238...19,449,370
Ensembl chr 7:19,435,238...19,449,363 		JBrowse link
G Tomm5 translocase of outer mitochondrial membrane 5 ISO RGD PMID:25980382 RGD:10412661 NCBI chr 4:45,105,209...45,108,113
Ensembl chr 4:45,105,208...45,108,114 		JBrowse link
G Tomm6 translocase of outer mitochondrial membrane 6 ISO RGD PMID:25980382 RGD:10412661 NCBI chr17:47,997,570...47,999,311
Ensembl chr17:47,997,571...47,999,311 		JBrowse link
G Tomm7 translocase of outer mitochondrial membrane 7 ISO RGD PMID:25980382 RGD:10412661 NCBI chr 5:24,043,942...24,049,143
Ensembl chr 5:24,043,942...24,049,159 		JBrowse link
G Tomm70a translocase of outer mitochondrial membrane 70A ISO RGD PMID:25980382 RGD:10412661 NCBI chr16:56,942,077...56,974,893
Ensembl chr16:56,942,066...56,977,068 		JBrowse link
citric acid cycle pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acly ATP citrate lyase IEA KEGG mmu:00020 NCBI chr11:100,367,178...100,418,826
Ensembl chr11:100,367,179...100,418,826 		JBrowse link
G Aco1 aconitase 1 IEA KEGG mmu:00020 NCBI chr 4:40,143,265...40,199,009
Ensembl chr 4:40,143,081...40,198,338 		JBrowse link
G Aco2 aconitase 2, mitochondrial IEA
ISO		 KEGG
SMPDB
RGD		 PMID:9712727 SMP:00057 mmu:00020, RGD:2306877 NCBI chr15:81,756,664...81,799,338
Ensembl chr15:81,756,510...81,799,334 		JBrowse link
G Cs citrate synthase ISO
IEA		 SMPDB
KEGG
RGD		 PMID:9712727 PMID:938457 SMP:00057 mmu:00020, RGD:2306877, RGD:2306828 NCBI chr10:128,173,596...128,198,351
Ensembl chr10:128,173,603...128,198,348 		JBrowse link
G Csl citrate synthase like IEA KEGG mmu:00020 NCBI chr10:99,593,567...99,595,346
Ensembl chr10:99,593,568...99,595,520 		JBrowse link
G Dlat dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex) IEA
ISO		 KEGG
SMPDB		 SMP:00057 mmu:00020 NCBI chr 9:50,545,933...50,571,080
Ensembl chr 9:50,545,933...50,571,080 		JBrowse link
G Dld dihydrolipoamide dehydrogenase ISO
IEA		 SMPDB
KEGG
RGD		 PMID:10672230 SMP:00057 mmu:00020, RGD:2306878 NCBI chr12:31,381,561...31,401,470
Ensembl chr12:31,381,276...31,401,452 		JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) ISO
IEA		 SMPDB
KEGG
RGD		 PMID:10672230 SMP:00057 mmu:00020, RGD:2306878 NCBI chr12:85,157,597...85,180,865
Ensembl chr12:85,157,607...85,181,619 		JBrowse link
G Fh1 fumarate hydratase 1 ISO
IEA		 SMPDB
KEGG
RGD		 PMID:938457 SMP:00057 mmu:00020, RGD:2306828 NCBI chr 1:175,428,944...175,453,201
Ensembl chr 1:175,427,940...175,453,201 		JBrowse link
G Idh1 isocitrate dehydrogenase 1 (NADP+), soluble IEA KEGG mmu:00020 NCBI chr 1:65,197,775...65,225,638
Ensembl chr 1:65,197,775...65,225,659 		JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial IEA KEGG mmu:00020 NCBI chr 7:79,744,594...79,768,356
Ensembl chr 7:79,744,594...79,765,140 		JBrowse link
G Idh3a isocitrate dehydrogenase 3 (NAD+) alpha ISO
IEA		 SMPDB
KEGG
RGD		 PMID:938457 SMP:00057 mmu:00020, RGD:2306828 NCBI chr 9:54,493,795...54,511,946
Ensembl chr 9:54,493,618...54,511,945 		JBrowse link
G Idh3b isocitrate dehydrogenase 3 (NAD+) beta ISO
IEA		 SMPDB
KEGG
RGD		 PMID:938457 SMP:00057 mmu:00020, RGD:2306828 NCBI chr 2:130,121,229...130,126,371
Ensembl chr 2:130,121,229...130,126,467 		JBrowse link
G Idh3g isocitrate dehydrogenase 3 (NAD+), gamma ISO
IEA		 SMPDB
KEGG
RGD		 PMID:938457 SMP:00057 mmu:00020, RGD:2306828 NCBI chr  X:72,822,569...72,830,471
Ensembl chr  X:72,822,569...72,830,503 		JBrowse link
G Mdh1 malate dehydrogenase 1, NAD (soluble) IEA KEGG mmu:00020 NCBI chr11:21,506,692...21,521,934
Ensembl chr11:21,506,692...21,522,367 		JBrowse link
G Mdh2 malate dehydrogenase 2, NAD (mitochondrial) ISO
IEA		 SMPDB
KEGG
RGD		 PMID:938457 SMP:00057 mmu:00020, RGD:2306828 NCBI chr 5:135,807,503...135,819,240
Ensembl chr 5:135,807,334...135,819,252 		JBrowse link
G Mpc1 mitochondrial pyruvate carrier 1 ISO SMPDB SMP:00057 NCBI chr17:8,502,590...8,516,499
Ensembl chr17:8,501,736...8,516,493 		JBrowse link
G Ogdh oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) ISO
IEA		 SMPDB
KEGG
RGD		 PMID:9712727 PMID:10672230 SMP:00057 mmu:00020, RGD:2306877, RGD:2306878 NCBI chr11:6,241,597...6,309,094
Ensembl chr11:6,241,633...6,306,642 		JBrowse link
G Ogdhl oxoglutarate dehydrogenase-like IEA KEGG mmu:00020 NCBI chr14:32,043,941...32,070,108
Ensembl chr14:32,043,976...32,070,108 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1, cytosolic IEA KEGG mmu:00020 NCBI chr 2:172,994,866...173,001,067
Ensembl chr 2:172,994,841...173,001,066 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) IEA KEGG mmu:00020 NCBI chr14:55,777,721...55,787,477
Ensembl chr14:55,777,723...55,788,699 		JBrowse link
G Pcx pyruvate carboxylase IEA
ISO		 KEGG
SMPDB		 SMP:00057 mmu:00020 NCBI chr19:4,560,500...4,671,780
Ensembl chr19:4,560,500...4,671,780 		JBrowse link
G Pdha1 pyruvate dehydrogenase E1 alpha 1 IEA
ISO		 KEGG
SMPDB		 SMP:00057 mmu:00020 NCBI chr  X:158,905,215...158,921,426
Ensembl chr  X:158,905,205...158,921,409 		JBrowse link
G Pdha2 pyruvate dehydrogenase E1 alpha 2 IEA KEGG mmu:00020 NCBI chr 3:140,915,765...140,918,116
Ensembl chr 3:140,915,765...140,918,116 		JBrowse link
G Pdhb pyruvate dehydrogenase (lipoamide) beta IEA
ISO		 KEGG
SMPDB		 SMP:00057 mmu:00020 NCBI chr14:14,296,470...14,303,782
Ensembl chr14:14,296,748...14,303,777 		JBrowse link
G Sdha succinate dehydrogenase complex, subunit A, flavoprotein (Fp) ISO
IEA		 SMPDB
KEGG
RGD		 PMID:16143825 SMP:00057 mmu:00020, RGD:2306881 NCBI chr13:74,470,374...74,498,359
Ensembl chr13:74,470,373...74,498,399 		JBrowse link
G Sdhb succinate dehydrogenase complex, subunit B, iron sulfur (Ip) ISO
IEA		 SMPDB
KEGG
RGD		 PMID:16143825 SMP:00057 mmu:00020, RGD:2306881 NCBI chr 4:140,688,582...140,706,509
Ensembl chr 4:140,688,514...140,706,504 		JBrowse link
G Sdhc succinate dehydrogenase complex, subunit C, integral membrane protein ISO
IEA		 SMPDB
KEGG
RGD		 PMID:16143825 SMP:00057 mmu:00020, RGD:2306881 NCBI chr 1:170,956,726...170,978,209
Ensembl chr 1:170,954,734...170,978,172 		JBrowse link
G Sdhd succinate dehydrogenase complex, subunit D, integral membrane protein ISO
IEA		 SMPDB
KEGG
RGD		 PMID:16143825 SMP:00057 mmu:00020, RGD:2306881 NCBI chr 9:50,507,640...50,515,149
Ensembl chr 9:50,507,657...50,515,112 		JBrowse link
G Sucla2 succinate-Coenzyme A ligase, ADP-forming, beta subunit ISO
IEA		 KEGG
RGD		 PMID:17403370 mmu:00020, RGD:2306915 NCBI chr14:73,790,226...73,833,584
Ensembl chr14:73,762,759...73,833,582 		JBrowse link
G Suclg1 succinate-CoA ligase, GDP-forming, alpha subunit ISO
IEA		 SMPDB
KEGG
RGD		 PMID:17403370 SMP:00057 mmu:00020, RGD:2306915 NCBI chr 6:73,225,488...73,253,890
Ensembl chr 6:73,225,365...73,253,894 		JBrowse link
G Suclg2 succinate-Coenzyme A ligase, GDP-forming, beta subunit ISO
IEA		 SMPDB
KEGG
RGD		 PMID:17403370 SMP:00057 mmu:00020, RGD:2306915 NCBI chr 6:95,449,992...95,695,799
Ensembl chr 6:95,449,990...95,695,781 		JBrowse link
coagulation cascade pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A2m alpha-2-macroglobulin IEA KEGG mmu:04610 NCBI chr 6:121,612,920...121,656,197
Ensembl chr 6:121,612,335...121,656,186 		JBrowse link
G Apoh apolipoprotein H ISS RGD PMID:15507263 RGD:1578489 NCBI chr11:108,286,123...108,305,222
Ensembl chr11:108,234,180...108,305,222 		JBrowse link
G Bdkrb1 bradykinin receptor, beta 1 IEA KEGG mmu:04610 NCBI chr12:105,570,350...105,571,770
Ensembl chr12:105,569,344...105,571,687 		JBrowse link
G Bdkrb2 bradykinin receptor, beta 2 IEA KEGG mmu:04610 NCBI chr12:105,529,431...105,561,503
Ensembl chr12:105,529,485...105,561,496 		JBrowse link
G C1qa complement component 1, q subcomponent, alpha polypeptide IEA KEGG mmu:04610 NCBI chr 4:136,623,227...136,626,155
Ensembl chr 4:136,623,228...136,626,114 		JBrowse link
G C1qb complement component 1, q subcomponent, beta polypeptide IEA KEGG mmu:04610 NCBI chr 4:136,607,437...136,613,511
Ensembl chr 4:136,607,440...136,613,498 		JBrowse link
G C1qc complement component 1, q subcomponent, C chain IEA KEGG mmu:04610 NCBI chr 4:136,617,112...136,620,242
Ensembl chr 4:136,617,115...136,620,376 		JBrowse link
G C1s1 complement component 1, s subcomponent 1 IEA KEGG mmu:04610 NCBI chr 6:124,507,303...124,519,340
Ensembl chr 6:124,507,304...124,519,318 		JBrowse link
G C1s2 complement component 1, s subcomponent 2 IEA KEGG mmu:04610 NCBI chr 6:124,601,584...124,613,044
Ensembl chr 6:124,601,584...124,613,044 		JBrowse link
G C2 complement component 2 (within H-2S) IEA KEGG mmu:04610 NCBI chr17:35,081,578...35,101,076
Ensembl chr17:35,081,580...35,117,241 		JBrowse link
G C3 complement component 3 IEA KEGG mmu:04610 NCBI chr17:57,510,967...57,535,136
Ensembl chr17:57,510,970...57,535,136 		JBrowse link
G C3ar1 complement component 3a receptor 1 IEA KEGG mmu:04610 NCBI chr 6:122,824,099...122,833,116
Ensembl chr 6:122,824,097...122,833,120 		JBrowse link
G C4b complement component 4B (Chido blood group) IEA KEGG mmu:04610 NCBI chr17:34,947,249...34,962,876
Ensembl chr17:34,947,354...34,962,856 		JBrowse link
G C4bp complement component 4 binding protein IEA KEGG mmu:04610 NCBI chr 1:130,563,658...130,589,394
Ensembl chr 1:130,562,510...130,589,369 		JBrowse link
G C5ar1 complement component 5a receptor 1 IEA KEGG mmu:04610 NCBI chr 7:15,980,668...15,993,465
Ensembl chr 7:15,980,668...15,993,465 		JBrowse link
G C6 complement component 6 IEA KEGG mmu:04610 NCBI chr15:4,756,550...4,833,527
Ensembl chr15:4,756,657...4,844,449 		JBrowse link
G C7 complement component 7 IEA KEGG mmu:04610 NCBI chr15:5,017,232...5,093,255
Ensembl chr15:5,018,244...5,093,222 		JBrowse link
G C8a complement component 8, alpha polypeptide IEA KEGG mmu:04610 NCBI chr 4:104,672,876...104,733,684
Ensembl chr 4:104,672,876...104,733,595 		JBrowse link
G C8b complement component 8, beta polypeptide IEA KEGG mmu:04610 NCBI chr 4:104,623,514...104,661,745
Ensembl chr 4:104,623,514...104,661,745 		JBrowse link
G C8g complement component 8, gamma polypeptide IEA KEGG mmu:04610 NCBI chr 2:25,388,662...25,391,919
Ensembl chr 2:25,388,663...25,391,731 		JBrowse link
G C9 complement component 9 IEA KEGG mmu:04610 NCBI chr15:6,474,827...6,528,306
Ensembl chr15:6,474,808...6,528,232 		JBrowse link
G Cd46 CD46 antigen, complement regulatory protein IEA KEGG mmu:04610 NCBI chr 1:194,721,279...194,781,149
Ensembl chr 1:194,719,134...194,774,557 		JBrowse link
G Cd55 CD55 molecule, decay accelerating factor for complement IEA KEGG mmu:04610 NCBI chr 1:130,357,526...130,390,513
Ensembl chr 1:130,366,764...130,390,481 		JBrowse link
G Cd55b CD55 molecule, decay accelerating factor for complement B IEA KEGG mmu:04610 NCBI chr 1:130,316,263...130,350,831
Ensembl chr 1:130,316,274...130,350,746 		JBrowse link
G Cd59a CD59a antigen IEA KEGG mmu:04610 NCBI chr 2:103,926,177...103,945,755
Ensembl chr 2:103,926,146...103,945,699 		JBrowse link
G Cd59b CD59b antigen IEA KEGG mmu:04610 NCBI chr 2:103,900,127...103,920,619
Ensembl chr 2:103,900,194...103,921,532 		JBrowse link
G Cfb complement factor B IEA KEGG mmu:04610 NCBI chr17:35,075,350...35,081,492
Ensembl chr17:35,075,350...35,081,494 		JBrowse link
G Cfd complement factor D (adipsin) IEA KEGG mmu:04610 NCBI chr10:79,726,687...79,728,489
Ensembl chr10:79,726,687...79,728,489 		JBrowse link
G Cfh complement component factor h IEA KEGG mmu:04610 NCBI chr 1:140,013,593...140,111,149
Ensembl chr 1:140,012,446...140,111,502 		JBrowse link
G Cfi complement component factor i IEA KEGG mmu:04610 NCBI chr 3:129,630,432...129,668,978
Ensembl chr 3:129,629,533...129,668,981 		JBrowse link
G Cpb2 carboxypeptidase B2 (plasma) IEA KEGG mmu:04610 NCBI chr14:75,479,727...75,520,995
Ensembl chr14:75,479,727...75,520,995 		JBrowse link
G Cr1l complement component (3b/4b) receptor 1-like IEA KEGG mmu:04610 NCBI chr 1:194,781,019...194,813,878
Ensembl chr 1:194,779,690...194,813,894 		JBrowse link
G Cr2 complement receptor 2 IEA KEGG mmu:04610 NCBI chr 1:194,819,120...194,859,096
Ensembl chr 1:194,819,119...194,859,024 		JBrowse link
G F10 coagulation factor X ISO
IEA		 KEGG
RGD		 PMID:12356487 PMID:12787532 PMID:26018600 PMID:10048754 mmu:04610, RGD:1580376, RGD:11352277, RGD:11342779, RGD:2290183 NCBI chr 8:13,087,308...13,106,676
Ensembl chr 8:13,087,308...13,106,676 		JBrowse link
G F11 coagulation factor XI ISO
IEA		 KEGG
RGD		 PMID:10048754 PMID:12787532 PMID:26018600 mmu:04610, RGD:2290183, RGD:11352277, RGD:11342779 NCBI chr 8:45,693,696...45,715,092
Ensembl chr 8:45,694,211...45,715,068 		JBrowse link
G F12 coagulation factor XII (Hageman factor) ISO
IEA		 KEGG
RGD		 PMID:10048754 PMID:12787532 PMID:26018600 mmu:04610, RGD:2290183, RGD:11352277, RGD:11342779 NCBI chr13:55,565,771...55,574,617
Ensembl chr13:55,565,771...55,574,606 		JBrowse link
G F13a1 coagulation factor XIII, A1 subunit IEA
ISO		 KEGG
RGD		 PMID:16102057 mmu:04610, RGD:11352259 NCBI chr13:37,051,150...37,234,220
Ensembl chr13:37,051,152...37,234,220 		JBrowse link
G F13b coagulation factor XIII, beta subunit IEA
ISO		 KEGG
RGD		 PMID:16102057 mmu:04610, RGD:11352259 NCBI chr 1:139,429,285...139,451,496
Ensembl chr 1:139,429,440...139,451,490 		JBrowse link
G F2 coagulation factor II ISS
ISO
IEA		 KEGG
RGD		 PMID:15975137 PMID:12787532 PMID:26018600 PMID:10048754 mmu:04610, RGD:1578509, RGD:11352277, RGD:11342779, RGD:2290183 NCBI chr 2:91,442,742...91,466,799
Ensembl chr 2:91,455,665...91,466,759 		JBrowse link
G F2r coagulation factor II (thrombin) receptor IEA KEGG mmu:04610 NCBI chr13:95,738,288...95,754,974
Ensembl chr13:95,738,311...95,754,995 		JBrowse link
G F3 coagulation factor III IEA
ISO		 KEGG
RGD		 PMID:12787532 PMID:26018600 mmu:04610, RGD:11352277, RGD:11342779 NCBI chr 3:121,517,186...121,528,701
Ensembl chr 3:121,517,186...121,528,697 		JBrowse link
G F5 coagulation factor V ISO
IEA		 KEGG
RGD		 PMID:15147718 PMID:12787532 PMID:26018600 PMID:10048754 mmu:04610, RGD:1580372, RGD:11352277, RGD:11342779, RGD:2290183 NCBI chr 1:163,979,396...164,048,539
Ensembl chr 1:163,979,407...164,047,846 		JBrowse link
G F7 coagulation factor VII ISO
IEA		 KEGG
RGD		 PMID:12356487 PMID:12787532 PMID:26018600 PMID:10048754 mmu:04610, RGD:1580376, RGD:11352277, RGD:11342779, RGD:2290183 NCBI chr 8:13,075,499...13,085,809
Ensembl chr 8:13,076,034...13,085,809 		JBrowse link
G F8 coagulation factor VIII ISO
IEA		 KEGG
RGD		 PMID:7721754 PMID:12787532 PMID:26018600 PMID:10048754 mmu:04610, RGD:1582371, RGD:11352277, RGD:11342779, RGD:2290183 NCBI chr  X:74,213,950...74,426,342
Ensembl chr  X:74,216,321...74,426,221 		JBrowse link
G F9 coagulation factor IX ISO
IEA		 KEGG
RGD		 PMID:12356487 PMID:12787532 PMID:26018600 PMID:10048754 mmu:04610, RGD:1580376, RGD:11352277, RGD:11342779, RGD:2290183 NCBI chr  X:59,044,675...59,076,120
Ensembl chr  X:59,044,824...59,076,119 		JBrowse link
G Fga fibrinogen alpha chain IEA
ISO		 KEGG
RGD		 PMID:16102057 mmu:04610, RGD:11352259 NCBI chr 3:82,933,460...82,940,934
Ensembl chr 3:82,933,383...82,940,934 		JBrowse link
G Fgb fibrinogen beta chain IEA
ISO		 KEGG
RGD		 PMID:16102057 mmu:04610, RGD:11352259 NCBI chr 3:82,949,553...82,957,170
Ensembl chr 3:82,947,448...82,957,170 		JBrowse link
G Fgg fibrinogen gamma chain IEA
ISO		 KEGG
RGD		 PMID:16102057 mmu:04610, RGD:11352259 NCBI chr 3:82,915,031...82,922,363
Ensembl chr 3:82,915,031...82,922,356 		JBrowse link
G Hc hemolytic complement IEA KEGG mmu:04610 NCBI chr 2:34,873,341...34,958,518
Ensembl chr 2:34,873,343...34,951,450 		JBrowse link
G Klkb1 kallikrein B, plasma 1 IEA KEGG mmu:04610 NCBI chr 8:45,719,725...45,747,872
Ensembl chr 8:45,719,726...45,747,896 		JBrowse link
G Kng1 kininogen 1 IEA KEGG mmu:04610 NCBI chr16:22,876,970...22,900,828
Ensembl chr16:22,876,615...22,900,828 		JBrowse link
G Kng2 kininogen 2 IEA KEGG mmu:04610 NCBI chr16:22,804,602...22,847,851
Ensembl chr16:22,804,604...22,848,232 		JBrowse link
G Masp1 mannan-binding lectin serine peptidase 1 IEA KEGG mmu:04610 NCBI chr16:23,261,778...23,340,127
Ensembl chr16:23,268,167...23,339,565 		JBrowse link
G Masp2 mannan-binding lectin serine peptidase 2 IEA KEGG mmu:04610 NCBI chr 4:148,679,079...148,699,939
Ensembl chr 4:148,687,011...148,699,956 		JBrowse link
G Mbl1 mannose-binding lectin (protein A) 1 IEA KEGG mmu:04610 NCBI chr14:40,873,413...40,885,861
Ensembl chr14:40,873,415...40,881,558 		JBrowse link
G Mbl2 mannose-binding lectin (protein C) 2 IEA KEGG mmu:04610 NCBI chr19:30,210,306...30,217,087
Ensembl chr19:30,210,342...30,217,087 		JBrowse link
G Plat plasminogen activator, tissue IEA KEGG mmu:04610 NCBI chr 8:23,247,655...23,272,864
Ensembl chr 8:23,247,743...23,272,860 		JBrowse link
G Plau plasminogen activator, urokinase IEA KEGG mmu:04610 NCBI chr14:20,886,730...20,893,456
Ensembl chr14:20,886,728...20,893,453 		JBrowse link
G Plaur plasminogen activator, urokinase receptor IEA KEGG mmu:04610 NCBI chr 7:24,161,857...24,175,393
Ensembl chr 7:24,161,909...24,175,393 		JBrowse link
G Plg plasminogen IEA KEGG mmu:04610 NCBI chr17:12,597,496...12,638,271
Ensembl chr17:12,597,495...12,638,272 		JBrowse link
G Proc protein C IEA
ISO		 KEGG
RGD		 PMID:12787532 mmu:04610, RGD:11352277 NCBI chr18:32,256,179...32,272,623
Ensembl chr18:32,256,179...32,272,623 		JBrowse link
G Pros1 protein S (alpha) IEA KEGG mmu:04610 NCBI chr16:62,674,670...62,749,709
Ensembl chr16:62,674,670...62,749,709 		JBrowse link
G Proz protein Z, vitamin K-dependent plasma glycoprotein ISO RGD PMID:23690629 RGD:11352284 NCBI chr 8:13,110,583...13,126,026
Ensembl chr 8:13,110,914...13,126,026 		JBrowse link
G Serpina10 serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10 ISO RGD PMID:23690629 RGD:11352284 NCBI chr12:103,582,934...103,597,681
Ensembl chr12:103,581,045...103,597,703 		JBrowse link
G Serpina1a serine (or cysteine) peptidase inhibitor, clade A, member 1A IEA KEGG mmu:04610 NCBI chr12:103,819,554...103,829,878
Ensembl chr12:103,819,848...103,829,821 		JBrowse link
G Serpina1b serine (or cysteine) preptidase inhibitor, clade A, member 1B IEA KEGG mmu:04610 NCBI chr12:103,694,415...103,704,448
Ensembl chr12:103,694,415...103,796,632 		JBrowse link
G Serpina1c serine (or cysteine) peptidase inhibitor, clade A, member 1C IEA KEGG mmu:04610 NCBI chr12:103,861,185...103,871,209
Ensembl chr12:103,861,185...103,871,146 		JBrowse link
G Serpina1d serine (or cysteine) peptidase inhibitor, clade A, member 1D IEA KEGG mmu:04610 NCBI chr12:103,729,846...103,739,892
Ensembl chr12:103,729,853...103,739,851 		JBrowse link
G Serpina1e serine (or cysteine) peptidase inhibitor, clade A, member 1E IEA KEGG mmu:04610 NCBI chr12:103,913,190...103,923,156
Ensembl chr12:103,913,190...103,925,234 		JBrowse link
G Serpina5 serine (or cysteine) peptidase inhibitor, clade A, member 5 IEA KEGG mmu:04610 NCBI chr12:104,065,572...104,072,397
Ensembl chr12:104,067,372...104,072,396 		JBrowse link
G Serpinc1 serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1 IEA
ISO		 KEGG
RGD		 PMID:12787532 mmu:04610, RGD:11352277 NCBI chr 1:160,806,153...160,830,113
Ensembl chr 1:160,806,155...160,833,433 		JBrowse link
G Serpind1 serine (or cysteine) peptidase inhibitor, clade D, member 1 IEA KEGG mmu:04610 NCBI chr16:17,149,235...17,161,438
Ensembl chr16:17,149,235...17,161,439 		JBrowse link
G Serpine1 serine (or cysteine) peptidase inhibitor, clade E, member 1 IEA KEGG mmu:04610 NCBI chr 5:137,090,358...137,101,126
Ensembl chr 5:137,090,358...137,101,122 		JBrowse link
G Serpinf2 serine (or cysteine) peptidase inhibitor, clade F, member 2 IEA KEGG mmu:04610 NCBI chr11:75,322,562...75,330,327
Ensembl chr11:75,322,558...75,330,417 		JBrowse link
G Serping1 serine (or cysteine) peptidase inhibitor, clade G, member 1 IEA
ISO		 KEGG
RGD		 PMID:12787532 PMID:26018600 mmu:04610, RGD:11352277, RGD:11342779 NCBI chr 2:84,595,704...84,605,778
Ensembl chr 2:84,595,731...84,605,788 		JBrowse link
G Tfpi tissue factor pathway inhibitor IEA
ISO		 KEGG
RGD		 PMID:12787532 PMID:26018600 mmu:04610, RGD:11352277, RGD:11342779 NCBI chr 2:84,263,199...84,307,119
Ensembl chr 2:84,263,199...84,307,119 		JBrowse link
G Thbd thrombomodulin IEA KEGG mmu:04610 NCBI chr 2:148,246,391...148,250,108
Ensembl chr 2:148,246,386...148,250,108 		JBrowse link
G Vwf Von Willebrand factor IEA KEGG mmu:04610 NCBI chr 6:125,529,911...125,663,642
Ensembl chr 6:125,523,737...125,663,642 		JBrowse link
cytosolic iron-sulfur cluster protein assembly pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ciao1 cytosolic iron-sulfur protein assembly 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr 2:127,082,858...127,089,736
Ensembl chr 2:127,082,858...127,089,736 		JBrowse link
G Ciao2a cytosolic iron-sulfur assembly component 2A ISO RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr 9:66,033,878...66,046,250
Ensembl chr 9:66,033,893...66,046,237 		JBrowse link
G Ciao2b cytosolic iron-sulfur assembly component 2B ISO RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr 8:105,366,471...105,368,360
Ensembl chr 8:105,366,470...105,368,597 		JBrowse link
G Ciao3 cytosolic iron-sulfur assembly component 3 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr17:25,992,750...26,002,306
Ensembl chr17:25,992,750...26,002,306 		JBrowse link
G Ciapin1 cytokine induced apoptosis inhibitor 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr 8:95,546,446...95,565,454
Ensembl chr 8:95,546,432...95,564,986 		JBrowse link
G Mms19 MMS19 cytosolic iron-sulfur assembly component ISO RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr19:41,932,146...41,969,603
Ensembl chr19:41,929,525...41,969,596 		JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr 2:25,134,825...25,145,458
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034 		JBrowse link
G Nubp1 nucleotide binding protein 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr16:10,229,748...10,242,317
Ensembl chr16:10,229,812...10,242,292 		JBrowse link
G Nubp2 nucleotide binding protein 2 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr17:25,101,585...25,105,423
Ensembl chr17:25,101,585...25,105,323 		JBrowse link
DNA modification pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxxc1 CXXC finger 1 (PHD domain) ISO RGD PMID:23697932 RGD:9479164 NCBI chr18:74,349,283...74,354,564
Ensembl chr18:74,349,195...74,354,567 		JBrowse link
G Dnmt1 DNA methyltransferase (cytosine-5) 1 ISO RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 9:20,818,501...20,871,084
Ensembl chr 9:20,818,505...20,871,184 		JBrowse link
G Dnmt3a DNA methyltransferase 3A ISO RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr12:3,851,559...3,964,443
Ensembl chr12:3,856,007...3,964,443 		JBrowse link
G Dnmt3b DNA methyltransferase 3B ISO RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 2:153,491,332...153,529,650
Ensembl chr 2:153,491,370...153,529,650 		JBrowse link
G Ebf1 early B cell factor 1 ISO RGD PMID:24825349 RGD:8695944 NCBI chr11:44,502,738...44,898,923
Ensembl chr11:44,508,144...44,898,918 		JBrowse link
G Kdm2a lysine (K)-specific demethylase 2A ISO RGD PMID:23697932 RGD:9479164 NCBI chr19:4,366,172...4,448,749
Ensembl chr19:4,364,447...4,448,313 		JBrowse link
G Kdm2b lysine (K)-specific demethylase 2B ISO RGD PMID:23697932 RGD:9479164 NCBI chr 5:123,008,727...123,127,333
Ensembl chr 5:123,008,728...123,127,886 		JBrowse link
G Kmt2a lysine (K)-specific methyltransferase 2A ISO RGD PMID:23697932 RGD:9479164 NCBI chr 9:44,714,652...44,793,492
Ensembl chr 9:44,714,652...44,792,594 		JBrowse link
G Kmt2c lysine (K)-specific methyltransferase 2C ISO RGD PMID:23697932 RGD:9479164 NCBI chr 5:25,476,793...25,703,853
Ensembl chr 5:25,476,796...25,703,781 		JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 ISO RGD PMID:23324617 RGD:8695954 NCBI chr18:74,400,676...74,415,808
Ensembl chr18:74,400,676...74,415,803 		JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chr18:70,701,298...70,761,769
Ensembl chr18:70,701,260...70,759,202 		JBrowse link
G Mbd4 methyl-CpG binding domain protein 4 ISO RGD PMID:23324617 RGD:8695954 NCBI chr 6:115,817,658...115,830,361
Ensembl chr 6:115,817,658...115,830,332 		JBrowse link
G Mecp2 methyl CpG binding protein 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,178,969 		JBrowse link
G Nanog Nanog homeobox ISO RGD PMID:24825349 RGD:8695944 NCBI chr 6:122,684,448...122,691,592
Ensembl chr 6:122,684,448...122,691,592 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) ISO RGD PMID:24825349 RGD:8695944 NCBI chr  X:100,683,617...100,727,957
Ensembl chr  X:100,683,666...100,727,957 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma ISO RGD PMID:24825349 RGD:8695944 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360 		JBrowse link
G Prdm14 PR domain containing 14 ISO RGD PMID:24825349 RGD:8695944 NCBI chr 1:13,183,652...13,197,387
Ensembl chr 1:13,183,681...13,197,387 		JBrowse link
G Sin3a transcriptional regulator, SIN3A (yeast) ISO RGD PMID:24825349 RGD:8695944 NCBI chr 9:56,979,271...57,035,652
Ensembl chr 9:56,979,324...57,035,650 		JBrowse link
G Spi1 spleen focus forming virus (SFFV) proviral integration oncogene ISO RGD PMID:24825349 RGD:8695944 NCBI chr 2:90,912,750...90,946,104
Ensembl chr 2:90,912,735...90,946,101 		JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 ISO RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr10:62,640,349...62,723,242
Ensembl chr10:62,640,349...62,744,775 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 ISO RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 3:133,169,438...133,250,882
Ensembl chr 3:133,169,440...133,250,900 		JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 ISO RGD PMID:22770212 PMID:23697932 PMID:24825349 RGD:8695943, RGD:9479164, RGD:8695944 NCBI chr 6:83,339,355...83,434,190
Ensembl chr 6:83,339,355...83,436,066 		JBrowse link
G Uhrf1 ubiquitin-like, containing PHD and RING finger domains, 1 ISO RGD PMID:23324617 RGD:8695954 NCBI chr17:56,610,405...56,630,486
Ensembl chr17:56,610,321...56,630,486 		JBrowse link
G Uhrf2 ubiquitin-like, containing PHD and RING finger domains 2 ISO RGD PMID:23324617 RGD:8695954 NCBI chr19:30,007,920...30,071,126
Ensembl chr19:30,007,913...30,071,122 		JBrowse link
G Zbtb33 zinc finger and BTB domain containing 33 ISO RGD PMID:23324617 RGD:8695954 NCBI chr  X:37,278,670...37,285,923
Ensembl chr  X:37,278,670...37,285,923 		JBrowse link
G Zbtb38 zinc finger and BTB domain containing 38 ISO RGD PMID:23324617 RGD:8695954 NCBI chr 9:96,564,820...96,613,728
Ensembl chr 9:96,564,823...96,634,884 		JBrowse link
G Zbtb4 zinc finger and BTB domain containing 4 ISO RGD PMID:23324617 RGD:8695954 NCBI chr11:69,656,738...69,674,852
Ensembl chr11:69,656,738...69,674,849 		JBrowse link
G Zfp57 zinc finger protein 57 ISO RGD PMID:23324617 RGD:8695954 NCBI chr17:37,307,060...37,326,196
Ensembl chr17:37,312,055...37,321,527 		JBrowse link
electron transport chain pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha ISO SMPDB SMP:00355 NCBI chr18:77,861,468...77,870,569
Ensembl chr18:77,861,429...77,870,569 		JBrowse link
G Atp5f1b ATP synthase F1 subunit beta ISO SMPDB SMP:00355 NCBI chr10:127,919,176...127,926,257
Ensembl chr10:127,919,142...127,926,260 		JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma ISO SMPDB SMP:00355 NCBI chr 2:10,060,841...10,085,321
Ensembl chr 2:10,060,827...10,085,321 		JBrowse link
G Atp5f1d ATP synthase F1 subunit delta ISO SMPDB SMP:00355 NCBI chr10:79,974,451...79,981,662
Ensembl chr10:79,974,466...79,981,652 		JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon ISO SMPDB SMP:00355 NCBI chr 2:174,302,868...174,305,894
Ensembl chr 2:174,302,865...174,305,898 		JBrowse link
G Atp5mc2 ATP synthase membrane subunit c locus 2 ISO SMPDB SMP:00355 NCBI chr15:102,571,303...102,579,482
Ensembl chr15:102,571,299...102,580,787 		JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b ISO SMPDB SMP:00355 NCBI chr 3:105,850,014...105,866,579
Ensembl chr 3:105,850,014...105,867,415 		JBrowse link
G Cycs cytochrome c, somatic ISO SMPDB SMP:00355 NCBI chr 6:50,539,543...50,543,549
Ensembl chr 6:50,539,543...50,543,518 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase ISO SMPDB SMP:00355 NCBI chr 6:125,138,812...125,143,450
Ensembl chr 6:125,138,678...125,143,430 		JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 (soluble) ISO SMPDB SMP:00355 NCBI chr15:99,615,468...99,622,895
Ensembl chr15:99,615,396...99,622,886 		JBrowse link
G Gpd2 glycerol phosphate dehydrogenase 2, mitochondrial ISO SMPDB SMP:00355 NCBI chr 2:57,127,690...57,260,731
Ensembl chr 2:57,127,647...57,260,731 		JBrowse link
G mt-Atp6 ATP synthase 6, mitochondrial ISO SMPDB SMP:00355 NCBI chr MT:7,927...8,607
Ensembl chr MT:7,927...8,607 		JBrowse link
G mt-Co1 cytochrome c oxidase I, mitochondrial ISO SMPDB SMP:00355 NCBI chr MT:5,328...6,872
Ensembl chr MT:5,328...6,872 		JBrowse link
G Ndufa1 NADH:ubiquinone oxidoreductase subunit A1 ISO SMPDB SMP:00355 NCBI chr  X:36,451,241...36,454,891
Ensembl chr  X:36,451,241...36,454,816 		JBrowse link
G Sdha succinate dehydrogenase complex, subunit A, flavoprotein (Fp) ISO SMPDB
RGD		 PMID:16143825 SMP:00355, RGD:2306881 NCBI chr13:74,470,374...74,498,359
Ensembl chr13:74,470,373...74,498,399 		JBrowse link
G Sdhb succinate dehydrogenase complex, subunit B, iron sulfur (Ip) ISO SMPDB
RGD		 PMID:16143825 SMP:00355, RGD:2306881 NCBI chr 4:140,688,582...140,706,509
Ensembl chr 4:140,688,514...140,706,504 		JBrowse link
G Sdhc succinate dehydrogenase complex, subunit C, integral membrane protein ISO SMPDB
RGD		 PMID:16143825 SMP:00355, RGD:2306881 NCBI chr 1:170,956,726...170,978,209
Ensembl chr 1:170,954,734...170,978,172 		JBrowse link
G Sdhd succinate dehydrogenase complex, subunit D, integral membrane protein IMP
ISO		 SMPDB
RGD		 PMID:15572694 PMID:16143825 SMP:00355, RGD:1580035, RGD:2306881 NCBI chr 9:50,507,640...50,515,149
Ensembl chr 9:50,507,657...50,515,112 		JBrowse link
G Slc25a4 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4 ISO SMPDB SMP:00355 NCBI chr 8:46,660,205...46,664,099
Ensembl chr 8:46,659,834...46,664,321 		JBrowse link
G Slc37a4 solute carrier family 37 (glucose-6-phosphate transporter), member 4 ISO SMPDB SMP:00355 NCBI chr 9:44,308,243...44,314,263
Ensembl chr 9:44,308,149...44,314,265 		JBrowse link
G Uqcrc1 ubiquinol-cytochrome c reductase core protein 1 ISO SMPDB SMP:00355 NCBI chr 9:108,765,716...108,778,709
Ensembl chr 9:108,765,701...108,778,691 		JBrowse link
G Uqcrh ubiquinol-cytochrome c reductase hinge protein ISO experiments done with purified bovine protein RGD PMID:3036796 RGD:2301375 NCBI chr 4:115,924,162...115,932,267
Ensembl chr 4:115,924,162...115,932,268 		JBrowse link
energy homeostasis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lep leptin TAS RGD PMID:17010638 RGD:1625125 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876 		JBrowse link
G Lepr leptin receptor TAS RGD PMID:17010638 RGD:1625125 NCBI chr 4:101,574,393...101,676,375
Ensembl chr 4:101,574,601...101,672,549 		JBrowse link
epinephrine signaling pathway via adrenergic receptor beta term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenergic receptor, beta 1 ISO RGD PMID:19110970 RGD:4140391 NCBI chr19:56,710,549...56,713,582
Ensembl chr19:56,710,631...56,721,545 		JBrowse link
G Adrb2 adrenergic receptor, beta 2 ISO RGD PMID:19110970 RGD:4140391 NCBI chr18:62,310,784...62,313,052
Ensembl chr18:62,310,887...62,313,030 		JBrowse link
G Arrb1 arrestin, beta 1 ISO RGD PMID:19229505 PMID:18268361 RGD:5135529, RGD:4140419 NCBI chr 7:99,184,356...99,255,979
Ensembl chr 7:99,184,673...99,255,978 		JBrowse link
G Arrb2 arrestin, beta 2 ISO RGD PMID:19229505 PMID:18268361 RGD:5135529, RGD:4140419 NCBI chr11:70,323,051...70,331,654
Ensembl chr11:70,323,461...70,331,654 		JBrowse link
G Gnas GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus ISO RGD PMID:19110970 RGD:4140391 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:19110970 PMID:19229505 RGD:4140391, RGD:5135529 NCBI chr19:4,336,027...4,356,350
Ensembl chr19:4,336,029...4,356,250 		JBrowse link
G Grk5 G protein-coupled receptor kinase 5 ISO RGD PMID:19110970 PMID:19229505 RGD:4140391, RGD:5135529 NCBI chr19:60,877,995...61,084,406
Ensembl chr19:60,878,187...61,084,406 		JBrowse link
G Snx13 sorting nexin 13 ISO RGD PMID:17173929 RGD:4140388 NCBI chr12:35,097,191...35,197,479
Ensembl chr12:35,097,185...35,197,478 		JBrowse link
facilitative sugar transporter mediated glucose transport pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a1 solute carrier family 2 (facilitated glucose transporter), member 1 ISO RGD PMID:15449578 PMID:2211693 PMID:15466941 RGD:1626159, RGD:2303167, RGD:1625539 NCBI chr 4:118,965,942...118,994,527
Ensembl chr 4:118,965,908...118,995,180 		JBrowse link
G Slc2a2 solute carrier family 2 (facilitated glucose transporter), member 2 ISO RGD PMID:15449578 RGD:1626159 NCBI chr 3:28,752,052...28,782,510
Ensembl chr 3:28,752,052...28,785,508 		JBrowse link
G Slc2a3 solute carrier family 2 (facilitated glucose transporter), member 3 ISO RGD PMID:15449578 PMID:15466941 RGD:1626159, RGD:1625539 NCBI chr 6:122,704,783...122,779,149
Ensembl chr 6:122,704,768...122,778,599 		JBrowse link
G Slc2a4 solute carrier family 2 (facilitated glucose transporter), member 4 ISO RGD PMID:15449578 PMID:15466941 RGD:1626159, RGD:1625539 NCBI chr11:69,833,112...69,839,040
Ensembl chr11:69,833,365...69,839,014 		JBrowse link
fibrinolysis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpb2 carboxypeptidase B2 (plasma) ISO RGD PMID:26149056 RGD:11352249 NCBI chr14:75,479,727...75,520,995
Ensembl chr14:75,479,727...75,520,995 		JBrowse link
G Fga fibrinogen alpha chain ISO RGD PMID:26149056 RGD:11352249 NCBI chr 3:82,933,460...82,940,934
Ensembl chr 3:82,933,383...82,940,934 		JBrowse link
G Fgb fibrinogen beta chain ISO RGD PMID:26149056 RGD:11352249 NCBI chr 3:82,949,553...82,957,170
Ensembl chr 3:82,947,448...82,957,170 		JBrowse link
G Fgg fibrinogen gamma chain ISO RGD PMID:26149056 RGD:11352249 NCBI chr 3:82,915,031...82,922,363
Ensembl chr 3:82,915,031...82,922,356 		JBrowse link
G Plat plasminogen activator, tissue ISO RGD PMID:26149056 RGD:11352249 NCBI chr 8:23,247,655...23,272,864
Ensembl chr 8:23,247,743...23,272,860 		JBrowse link
G Plau plasminogen activator, urokinase ISO RGD PMID:26149056 RGD:11352249 NCBI chr14:20,886,730...20,893,456
Ensembl chr14:20,886,728...20,893,453 		JBrowse link
G Plg plasminogen ISO RGD PMID:26149056 RGD:11352249 NCBI chr17:12,597,496...12,638,271
Ensembl chr17:12,597,495...12,638,272 		JBrowse link
G Serpina5 serine (or cysteine) peptidase inhibitor, clade A, member 5 ISO RGD PMID:26149056 RGD:11352249 NCBI chr12:104,065,572...104,072,397
Ensembl chr12:104,067,372...104,072,396 		JBrowse link
G Serpinb2 serine (or cysteine) peptidase inhibitor, clade B, member 2 ISO RGD PMID:26149056 RGD:11352249 NCBI chr 1:107,439,153...107,453,330
Ensembl chr 1:107,439,153...107,463,208 		JBrowse link
G Serpine1 serine (or cysteine) peptidase inhibitor, clade E, member 1 ISO RGD PMID:26149056 RGD:11352249 NCBI chr 5:137,090,358...137,101,126
Ensembl chr 5:137,090,358...137,101,122 		JBrowse link
G Serpine2 serine (or cysteine) peptidase inhibitor, clade E, member 2 ISO RGD PMID:26149056 RGD:11352249 NCBI chr 1:79,772,038...79,836,382
Ensembl chr 1:79,771,914...79,838,897 		JBrowse link
G Serpinf2 serine (or cysteine) peptidase inhibitor, clade F, member 2 ISO RGD PMID:26149056 RGD:11352249 NCBI chr11:75,322,562...75,330,327
Ensembl chr11:75,322,558...75,330,417 		JBrowse link
folate cycle metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 6:90,527,751...90,576,153
Ensembl chr 6:90,463,409...90,577,185 		JBrowse link
G Amt aminomethyltransferase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 9:108,174,104...108,179,501
Ensembl chr 9:108,174,052...108,179,501 		JBrowse link
G Dhfr dihydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr13:92,491,291...92,525,561
Ensembl chr13:92,491,234...92,525,561 		JBrowse link
G Dld dihydrolipoamide dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr12:31,381,561...31,401,470
Ensembl chr12:31,381,276...31,401,452 		JBrowse link
G Dmgdh dimethylglycine dehydrogenase precursor ISO RGD PMID:20645850 RGD:7242560 NCBI chr13:93,810,944...93,889,331
Ensembl chr13:93,810,941...93,889,341 		JBrowse link
G Folh1 folate hydrolase 1 ISO RGD PMID:20814827 PMID:16859665 RGD:7242426, RGD:7242559 NCBI chr 7:86,365,733...86,425,171
Ensembl chr 7:86,368,185...86,425,151 		JBrowse link
G Folr1 folate receptor 1 (adult) ISO RGD PMID:22108709 RGD:7242557 NCBI chr 7:101,507,551...101,519,974
Ensembl chr 7:101,507,538...101,519,995 		JBrowse link
G Folr2 folate receptor 2 (fetal) ISO RGD PMID:22108709 RGD:7242557 NCBI chr 7:101,489,195...101,506,397
Ensembl chr 7:101,489,195...101,506,401 		JBrowse link
G Fpgs folylpolyglutamyl synthetase ISO RGD PMID:16859665 RGD:7242559 NCBI chr 2:32,572,621...32,594,208
Ensembl chr 2:32,572,621...32,594,157 		JBrowse link
G Gcsh glycine cleavage system protein H (aminomethyl carrier) ISO RGD PMID:20645850 RGD:7242560 NCBI chr 8:117,708,706...117,720,237
Ensembl chr 8:117,708,549...117,720,276 		JBrowse link
G Ggh gamma-glutamyl hydrolase ISO RGD PMID:16859665 RGD:7242559 NCBI chr 4:20,041,963...20,066,111
Ensembl chr 4:20,042,052...20,066,750 		JBrowse link
G Gldc glycine decarboxylase ISO RGD PMID:20645850 RGD:7242560 NCBI chr19:30,075,847...30,152,829
Ensembl chr19:30,075,847...30,152,829 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase ISO RGD PMID:22108709 RGD:7242557 NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like ISO RGD PMID:22108709 RGD:7242557 NCBI chr10:3,918,282...4,117,081
Ensembl chr10:3,923,118...4,117,081 		JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase ISO RGD PMID:20645850 PMID:22108709 RGD:7242560, RGD:7242557 NCBI chr 6:83,282,686...83,302,926
Ensembl chr 6:83,282,673...83,302,890 		JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like ISO RGD PMID:22108709 RGD:7242557 NCBI chr 5:91,078,704...91,169,227
Ensembl chr 5:91,078,976...91,169,227 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22108709 RGD:7242557 NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268 		JBrowse link
G Sardh sarcosine dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 2:27,078,405...27,138,344
Ensembl chr 2:27,078,405...27,138,349 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 (soluble) ISO RGD PMID:22108709 RGD:7242557 NCBI chr11:60,678,933...60,702,091
Ensembl chr11:60,678,930...60,702,544 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 (mitochondrial) ISO RGD PMID:20645850 PMID:22108709 RGD:7242560, RGD:7242557 NCBI chr10:127,352,992...127,358,313
Ensembl chr10:127,352,992...127,358,313 		JBrowse link
G Slc19a1 solute carrier family 19 (folate transporter), member 1 ISO RGD PMID:22108709 PMID:20814827 RGD:7242557, RGD:7242426 NCBI chr10:76,868,103...76,886,266
Ensembl chr10:76,868,075...76,896,836 		JBrowse link
G Slc25a32 solute carrier family 25, member 32 ISO RGD PMID:22332074 RGD:7242561 NCBI chr15:38,954,625...38,976,213
Ensembl chr15:38,954,626...38,976,111 		JBrowse link
G Slc46a1 solute carrier family 46, member 1 ISO RGD PMID:22108709 PMID:20814827 RGD:7242557, RGD:7242426 NCBI chr11:78,356,527...78,362,771
Ensembl chr11:78,356,523...78,362,885 		JBrowse link
folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 IEA KEGG mmu:00670 NCBI chr 6:90,527,751...90,576,153
Ensembl chr 6:90,463,409...90,577,185 		JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 IEA KEGG mmu:00670 NCBI chr10:83,320,386...83,370,008
Ensembl chr10:83,323,314...83,370,004 		JBrowse link
G Amt aminomethyltransferase IEA KEGG mmu:00670 NCBI chr 9:108,174,104...108,179,501
Ensembl chr 9:108,174,052...108,179,501 		JBrowse link
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IEA
ISO		 KEGG
RGD		 PMID:9332377 PMID:22332074 mmu:00670, RGD:70804, RGD:7242561 NCBI chr 1:71,596,315...71,618,562
Ensembl chr 1:71,596,309...71,618,790 		JBrowse link
G Dhfr dihydrofolate reductase IEA
ISO		 KEGG
RGD		 PMID:22332074 mmu:00670, RGD:7242561 NCBI chr13:92,491,291...92,525,561
Ensembl chr13:92,491,234...92,525,561 		JBrowse link
G Dmgdh dimethylglycine dehydrogenase precursor ISO RGD PMID:15358367 RGD:1547831 NCBI chr13:93,810,944...93,889,331
Ensembl chr13:93,810,941...93,889,341 		JBrowse link
G Folh1 folate hydrolase 1 ISO RGD PMID:9501243 RGD:728645 NCBI chr 7:86,365,733...86,425,171
Ensembl chr 7:86,368,185...86,425,151 		JBrowse link
G Ftcd formiminotransferase cyclodeaminase IEA KEGG mmu:00670 NCBI chr10:76,411,482...76,426,172
Ensembl chr10:76,411,482...76,426,172 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase IEA
ISO		 KEGG
RGD		 PMID:22332074 mmu:00670, RGD:7242561 NCBI chr16:91,418,283...91,444,505
Ensembl chr16:91,418,074...91,443,840 		JBrowse link
G Gnmt glycine N-methyltransferase ISO RGD PMID:8278367 RGD:1545057 NCBI chr17:47,036,590...47,040,091
Ensembl chr17:47,036,590...47,040,094 		JBrowse link
G Mtfmt mitochondrial methionyl-tRNA formyltransferase IEA KEGG mmu:00670 NCBI chr 9:65,343,064...65,360,336
Ensembl chr 9:65,343,064...65,360,336 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase IEA
ISO		 KEGG
RGD		 PMID:22332074 mmu:00670, RGD:7242561 NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like IEA KEGG mmu:00670 NCBI chr10:3,918,282...4,117,081
Ensembl chr10:3,923,118...4,117,081 		JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase IEA KEGG mmu:00670 NCBI chr 6:83,282,686...83,302,926
Ensembl chr 6:83,282,673...83,302,890 		JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like IEA KEGG mmu:00670 NCBI chr 5:91,078,704...91,169,227
Ensembl chr 5:91,078,976...91,169,227 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase IEA
ISO		 KEGG
RGD		 PMID:22332074 mmu:00670, RGD:7242561 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008 		JBrowse link
G Mthfs 5, 10-methenyltetrahydrofolate synthetase IEA KEGG mmu:00670 NCBI chr 9:89,093,243...89,122,278
Ensembl chr 9:89,092,729...89,259,766 		JBrowse link
G Mthfsl 5, 10-methenyltetrahydrofolate synthetase-like IEA KEGG mmu:00670 NCBI chr 9:88,567,696...88,602,381
Ensembl chr 9:88,570,655...88,602,349 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IEA
ISO		 KEGG
RGD		 PMID:20814827 mmu:00670, RGD:7242426 NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 (soluble) ISO
IEA		 KEGG
RGD		 PMID:3110140 PMID:22332074 mmu:00670, RGD:2300383, RGD:7242561 NCBI chr11:60,678,933...60,702,091
Ensembl chr11:60,678,930...60,702,544 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 (mitochondrial) ISO
IEA		 KEGG
RGD		 PMID:3110140 PMID:22332074 mmu:00670, RGD:2300383, RGD:7242561 NCBI chr10:127,352,992...127,358,313
Ensembl chr10:127,352,992...127,358,313 		JBrowse link
G Tyms thymidylate synthase IEA
ISO		 KEGG
RGD		 PMID:22332074 mmu:00670, RGD:7242561 NCBI chr 5:30,243,544...30,279,261
Ensembl chr 5:30,263,200...30,278,615 		JBrowse link
folate metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akp3 alkaline phosphatase 3, intestine, not Mn requiring IEA KEGG mmu:00790 NCBI chr 1:87,052,676...87,056,450
Ensembl chr 1:87,052,695...87,055,634 		JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 ISO SMPDB SMP:00053 NCBI chr 6:90,527,751...90,576,153
Ensembl chr 6:90,463,409...90,577,185 		JBrowse link
G Alpi alkaline phosphatase, intestinal IEA KEGG mmu:00790 NCBI chr 1:87,025,724...87,029,328
Ensembl chr 1:87,025,724...87,029,328 		JBrowse link
G Alpl alkaline phosphatase, liver/bone/kidney IEA KEGG mmu:00790 NCBI chr 4:137,469,042...137,523,695
Ensembl chr 4:137,469,044...137,523,695 		JBrowse link
G Alppl2 alkaline phosphatase, placental-like 2 IEA KEGG mmu:00790 NCBI chr 1:87,014,412...87,023,656
Ensembl chr 1:87,014,416...87,017,650 		JBrowse link
G Dhfr dihydrofolate reductase IEA
ISO		 KEGG
SMPDB		 SMP:00053 mmu:00790 NCBI chr13:92,491,291...92,525,561
Ensembl chr13:92,491,234...92,525,561 		JBrowse link
G Dmgdh dimethylglycine dehydrogenase precursor ISO RGD PMID:15358367 RGD:1547831 NCBI chr13:93,810,944...93,889,331
Ensembl chr13:93,810,941...93,889,341 		JBrowse link
G Folh1 folate hydrolase 1 ISO RGD PMID:9816319 RGD:151347637 NCBI chr 7:86,365,733...86,425,171
Ensembl chr 7:86,368,185...86,425,151 		JBrowse link
G Folr2 folate receptor 2 (fetal) ISO RGD PMID:8445646 RGD:1540379 NCBI chr 7:101,489,195...101,506,397
Ensembl chr 7:101,489,195...101,506,401 		JBrowse link
G Fpgs folylpolyglutamyl synthetase IEA
ISO		 KEGG
SMPDB		 SMP:00053 mmu:00790 NCBI chr 2:32,572,621...32,594,208
Ensembl chr 2:32,572,621...32,594,157 		JBrowse link
G Ftcd formiminotransferase cyclodeaminase ISO SMPDB SMP:00053 NCBI chr10:76,411,482...76,426,172
Ensembl chr10:76,411,482...76,426,172 		JBrowse link
G Gart phosphoribosylglycinamide formyltransferase ISO RGD PMID:12450384 RGD:1547842 NCBI chr16:91,418,283...91,444,505
Ensembl chr16:91,418,074...91,443,840 		JBrowse link
G Gch1 GTP cyclohydrolase 1 IEA KEGG mmu:00790 NCBI chr14:47,391,352...47,426,870
Ensembl chr14:47,391,352...47,426,870 		JBrowse link
G Ggh gamma-glutamyl hydrolase IEA
ISO		 KEGG
SMPDB		 SMP:00053 mmu:00790 NCBI chr 4:20,041,963...20,066,111
Ensembl chr 4:20,042,052...20,066,750 		JBrowse link
G Gnmt glycine N-methyltransferase ISO RGD PMID:15347642 RGD:1359070 NCBI chr17:47,036,590...47,040,091
Ensembl chr17:47,036,590...47,040,094 		JBrowse link
G Mocs1 molybdenum cofactor synthesis 1 IEA KEGG mmu:00790 NCBI chr17:49,735,378...49,762,463
Ensembl chr17:49,735,390...49,762,463 		JBrowse link
G Mocs2 molybdenum cofactor synthesis 2 IEA KEGG mmu:00790 NCBI chr13:114,954,707...114,965,956
Ensembl chr13:114,954,772...114,968,811 		JBrowse link
G Mtfmt mitochondrial methionyl-tRNA formyltransferase ISO SMPDB SMP:00053 NCBI chr 9:65,343,064...65,360,336
Ensembl chr 9:65,343,064...65,360,336 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase ISO SMPDB SMP:00053 NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577 		JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like ISO SMPDB SMP:00053 NCBI chr10:3,918,282...4,117,081
Ensembl chr10:3,923,118...4,117,081 		JBrowse link
G Mthfd2 methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase ISO SMPDB SMP:00053 NCBI chr 6:83,282,686...83,302,926
Ensembl chr 6:83,282,673...83,302,890 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO SMPDB SMP:00053 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008 		JBrowse link
G Mthfs 5, 10-methenyltetrahydrofolate synthetase ISO SMPDB SMP:00053 NCBI chr 9:89,093,243...89,122,278
Ensembl chr 9:89,092,729...89,259,766 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:15845641 RGD:1359026 NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:15979034 RGD:1359037 NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268 		JBrowse link
G Pts 6-pyruvoyl-tetrahydropterin synthase IEA KEGG mmu:00790 NCBI chr 9:50,432,917...50,440,017
Ensembl chr 9:50,432,917...50,440,024 		JBrowse link
G Qdpr quinoid dihydropteridine reductase IEA KEGG mmu:00790 NCBI chr 5:45,591,374...45,607,571
Ensembl chr 5:45,591,363...45,607,578 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 (soluble) ISO RGD PMID:15671219 RGD:1359815 NCBI chr11:60,678,933...60,702,091
Ensembl chr11:60,678,930...60,702,544 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 (mitochondrial) ISO RGD PMID:15671219 RGD:1359815 NCBI chr10:127,352,992...127,358,313
Ensembl chr10:127,352,992...127,358,313 		JBrowse link
G Slc19a1 solute carrier family 19 (folate transporter), member 1 ISO RGD PMID:11600421 RGD:735239 NCBI chr10:76,868,103...76,886,266
Ensembl chr10:76,868,075...76,896,836 		JBrowse link
G Slc46a1 solute carrier family 46, member 1 ISO SMPDB SMP:00053 NCBI chr11:78,356,527...78,362,771
Ensembl chr11:78,356,523...78,362,885 		JBrowse link
G Spr sepiapterin reductase IEA KEGG mmu:00790 NCBI chr 6:85,110,662...85,114,746
Ensembl chr 6:85,107,158...85,114,748 		JBrowse link
G Tyms thymidylate synthase ISO RGD PMID:9894005 RGD:1545055 NCBI chr 5:30,243,544...30,279,261
Ensembl chr 5:30,263,200...30,278,615 		JBrowse link
ghrelin system pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin TAS RGD PMID:15788704 RGD:1642818 NCBI chr 6:113,693,080...113,696,872
Ensembl chr 6:113,693,080...113,696,841 		JBrowse link
G Ghsr growth hormone secretagogue receptor TAS RGD PMID:15788704 RGD:1642818 NCBI chr 3:27,425,500...27,433,384
Ensembl chr 3:27,425,500...27,432,159 		JBrowse link
glucagon signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy5 adenylate cyclase 5 ISO RGD PMID:17010343 PMID:10894801 RGD:2315004, RGD:2315006 NCBI chr16:34,974,933...35,126,108
Ensembl chr16:34,975,247...35,126,108 		JBrowse link
G Adcy6 adenylate cyclase 6 ISO RGD PMID:17010343 PMID:10894801 RGD:2315004, RGD:2315006 NCBI chr15:98,484,982...98,508,119
Ensembl chr15:98,487,854...98,507,957 		JBrowse link
G Gcg glucagon ISO RGD PMID:16929363 RGD:2315015 NCBI chr 2:62,304,874...62,313,997
Ensembl chr 2:62,304,874...62,313,994 		JBrowse link
G Gcgr glucagon receptor ISO RGD PMID:15687107 PMID:17010343 RGD:1625210, RGD:2315004 NCBI chr11:120,420,011...120,429,815
Ensembl chr11:120,421,525...120,429,812 		JBrowse link
G Gnas GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus ISO RGD PMID:15687107 PMID:17010343 RGD:1625210, RGD:2315004 NCBI chr 2:174,126,113...174,188,537
Ensembl chr 2:174,126,113...174,188,537 		JBrowse link