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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:homeostasis pathway
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Accession:PW:0000355 term browser browse the term
Definition:Those pathways involved in the maintenance of the internal environment of an organism, the adequate levels of substances and nutrients, the stability of normal body states and the feedback regulatory mechanisms that control them.
Synonyms:related_synonym: homeostatic process



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adenosine monophosphate-activated protein kinase (AMPK) signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAB39 calcium binding protein 39 TAS RGD PMID:15509864 RGD:1600678 NCBI chr 2:230,712,842...230,821,075
Ensembl chr 2:230,712,842...230,821,075
JBrowse link
G CALM1 calmodulin 1 TAS RGD PMID:16054095 RGD:2311420 NCBI chr14:90,396,502...90,408,268
Ensembl chr14:90,396,502...90,408,268
JBrowse link
G CALM2 calmodulin 2 TAS RGD PMID:16054095 RGD:2311420 NCBI chr 2:47,160,082...47,176,936
Ensembl chr 2:47,160,084...47,176,921
JBrowse link
G CALM3 calmodulin 3 TAS RGD PMID:16054095 RGD:2311420 NCBI chr19:46,601,074...46,610,782
Ensembl chr19:46,601,074...46,610,782
JBrowse link
G CAMKK1 calcium/calmodulin dependent protein kinase kinase 1 ISO RGD PMID:16054095 RGD:2311420 NCBI chr17:3,860,315...3,893,053
Ensembl chr17:3,860,315...3,894,891
JBrowse link
G CAMKK2 calcium/calmodulin dependent protein kinase kinase 2 IDA RGD PMID:16054095 RGD:2311420 NCBI chr12:121,237,692...121,297,819
Ensembl chr12:121,237,675...121,298,308
JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO RGD PMID:30868489 RGD:25823184 NCBI chr11:68,754,620...68,844,277
Ensembl chr11:68,754,620...68,844,410
JBrowse link
G PPM1E protein phosphatase, Mg2+/Mn2+ dependent 1E IMP RGD PMID:20801214 RGD:7794756 NCBI chr17:58,755,854...58,985,179
Ensembl chr17:58,755,854...58,985,179
JBrowse link
G PPM1F protein phosphatase, Mg2+/Mn2+ dependent 1F IMP RGD PMID:20801214 RGD:7794756 NCBI chr22:21,919,425...21,952,848
Ensembl chr22:21,919,425...21,952,848
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha TAS RGD PMID:21782450 RGD:7794757 NCBI chr11:67,398,183...67,401,858
Ensembl chr11:67,398,181...67,421,183
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta TAS RGD PMID:21782450 RGD:7794757 NCBI chr 2:28,751,604...28,802,940
Ensembl chr 2:28,751,640...28,802,940
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D TAS RGD PMID:21782450 RGD:7794757 NCBI chr20:59,936,663...59,940,305
Ensembl chr20:59,936,663...59,940,305
JBrowse link
G PPP2CA protein phosphatase 2 catalytic subunit alpha TAS RGD PMID:21782450 RGD:7794757 NCBI chr 5:134,194,332...134,226,073
Ensembl chr 5:134,194,035...134,226,073
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 TAS RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr 5:40,759,389...40,798,374
Ensembl chr 5:40,759,389...40,798,374
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 TAS RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr 1:56,645,314...56,715,335
Ensembl chr 1:56,645,314...56,715,335
JBrowse link
G PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 TAS RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr12:119,667,952...119,681,619
Ensembl chr12:119,667,864...119,681,624
JBrowse link
G PRKAB2 protein kinase AMP-activated non-catalytic subunit beta 2 TAS RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr 1:147,155,106...147,172,470
Ensembl chr 1:147,155,106...147,172,550
JBrowse link
G PRKAG1 protein kinase AMP-activated non-catalytic subunit gamma 1 TAS RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr12:49,002,274...49,018,776
Ensembl chr12:49,002,274...49,018,807
JBrowse link
G PRKAG2 protein kinase AMP-activated non-catalytic subunit gamma 2 TAS RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr 7:151,556,127...151,877,115
Ensembl chr 7:151,556,124...151,877,125
JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 TAS RGD PMID:15509864 PMID:12829246 RGD:1600678, RGD:1600679 NCBI chr 2:218,822,308...218,831,803
Ensembl chr 2:218,822,308...218,832,086
JBrowse link
G STK11 serine/threonine kinase 11 TAS RGD PMID:15509864 RGD:1600678 NCBI chr19:1,205,778...1,228,431
Ensembl chr19:1,177,558...1,228,431
JBrowse link
G STRADA STE20 related adaptor alpha TAS RGD PMID:15509864 RGD:1600678 NCBI chr17:63,702,832...63,741,986
Ensembl chr17:63,682,336...63,741,986
JBrowse link
G TSC1 TSC complex subunit 1 ISO RGD PMID:31787541 RGD:25823196 NCBI chr 9:132,891,349...132,945,378
Ensembl chr 9:132,891,348...132,946,874
JBrowse link
alpha-helical insertion pathway of mitochondrial protein import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOMM70 translocase of outer mitochondrial membrane 70 TAS RGD PMID:25633533 RGD:10412658 NCBI chr 3:100,363,431...100,401,089
Ensembl chr 3:100,363,431...100,401,089
JBrowse link
altered citric acid cycle pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FH fumarate hydratase TAS RGD PMID:17211469 RGD:6907135 NCBI chr 1:241,497,603...241,519,755
Ensembl chr 1:241,497,511...241,519,799
JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B TAS RGD PMID:21771581 RGD:6907134 NCBI chr 1:17,018,722...17,054,032
Ensembl chr 1:17,018,722...17,054,032
JBrowse link
G SDHD succinate dehydrogenase complex subunit D TAS RGD PMID:21771581 RGD:6907134 NCBI chr11:112,086,873...112,095,794
Ensembl chr11:112,086,824...112,120,016
JBrowse link
altered DNA modification pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MBD4 methyl-CpG binding domain 4, DNA glycosylase IMP in silico assessment of loss of DNA-protein interactions and observed enhancement of DNA repair capacity (DRC) in the context of nucleotide excision repair (NER) pathway for SNP RGD PMID:24004570 RGD:9588971 NCBI chr 3:129,430,947...129,439,948
Ensembl chr 3:129,430,947...129,440,179
JBrowse link
altered energy homeostasis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEP leptin TAS RGD PMID:15703762 RGD:1357910 NCBI chr 7:128,241,278...128,257,629
Ensembl chr 7:128,241,278...128,257,629
JBrowse link
G LEPR leptin receptor TAS RGD PMID:15703762 RGD:1357910 NCBI chr 1:65,420,652...65,641,559
Ensembl chr 1:65,420,652...65,641,559
JBrowse link
G MC4R melanocortin 4 receptor TAS RGD PMID:15189116 RGD:1357925 NCBI chr18:60,371,062...60,372,775
Ensembl chr18:60,371,062...60,372,775
JBrowse link
G PCSK1 proprotein convertase subtilisin/kexin type 1 TAS RGD PMID:11874690 RGD:1357926 NCBI chr 5:96,390,333...96,433,248
Ensembl chr 5:96,390,333...96,434,143
JBrowse link
G POMC proopiomelanocortin TAS RGD PMID:11874690 RGD:1357926 NCBI chr 2:25,160,860...25,168,580
Ensembl chr 2:25,160,853...25,168,903
JBrowse link
altered folate cycle metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 TAS RGD PMID:22353665 RGD:7242562 NCBI chr 3:126,103,570...126,197,945
Ensembl chr 3:126,103,562...126,197,994
JBrowse link
G DHFR dihydrofolate reductase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983
JBrowse link
G FOLR1 folate receptor alpha TAS RGD PMID:22108709 RGD:7242557 NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 TAS RGD PMID:22108709 RGD:7242557 NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457
JBrowse link
G MTHFR methylenetetrahydrofolate reductase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278
JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025
JBrowse link
G SLC46A1 solute carrier family 46 member 1 TAS RGD PMID:22108709 RGD:7242557 NCBI chr17:28,394,642...28,406,592
Ensembl chr17:28,394,642...28,407,197
JBrowse link
altered folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 TAS RGD PMID:22353665 RGD:7242562 NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457
JBrowse link
G MTHFR methylenetetrahydrofolate reductase TAS RGD PMID:22353665 RGD:7242562 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase TAS RGD PMID:22353665 RGD:7242562 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278
JBrowse link
altered Hedgehog signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BOC BOC cell adhesion associated, oncogene regulated TAS RGD PMID:18772397 RGD:5490966 NCBI chr 3:113,210,926...113,287,459
Ensembl chr 3:113,211,003...113,287,459
JBrowse link
G DHH desert hedgehog signaling molecule ISO RGD PMID:11118005 RGD:634737 NCBI chr12:49,086,656...49,094,801
Ensembl chr12:49,086,656...49,094,801
JBrowse link
G GLI1 GLI family zinc finger 1 TAS RGD PMID:21186299 PMID:18772397 RGD:5491005, RGD:5490966 NCBI chr12:57,459,785...57,472,268
Ensembl chr12:57,459,785...57,472,268
JBrowse link
G GLI3 GLI family zinc finger 3 TAS RGD PMID:18772397 RGD:5490966 NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100
JBrowse link
G LRP2 LDL receptor related protein 2 TAS RGD PMID:18772397 RGD:5490966 NCBI chr 2:169,127,109...169,362,534
Ensembl chr 2:169,127,109...169,362,534
JBrowse link
G SHH sonic hedgehog signaling molecule TAS RGD PMID:19506583 RGD:5490965 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G SMO smoothened, frizzled class receptor IMP RGD PMID:9422511 RGD:704355 NCBI chr 7:129,188,633...129,213,545
Ensembl chr 7:129,188,633...129,213,545
JBrowse link
altered hypoxia inducible factor pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VHL von Hippel-Lindau tumor suppressor TAS RGD PMID:22035299 RGD:6907133 NCBI chr 3:10,141,778...10,153,667
Ensembl chr 3:10,141,778...10,153,667
JBrowse link
altered insulin responsive facilitative sugar transporter mediated glucose transport pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT2 AKT serine/threonine kinase 2 IMP RGD PMID:21979934 RGD:7248543 NCBI chr19:40,230,317...40,285,345
Ensembl chr19:40,230,317...40,285,536
JBrowse link
G TBC1D4 TBC1 domain family member 4 IMP RGD PMID:19470471 RGD:7248544 NCBI chr13:75,283,503...75,482,169
Ensembl chr13:75,283,503...75,482,169
JBrowse link
altered insulin secretion pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC8 ATP binding cassette subfamily C member 8 IMP DNA:missense mutation::A1369S RGD PMID:17259403 RGD:2313628 NCBI chr11:17,392,498...17,476,845
Ensembl chr11:17,392,498...17,476,894
JBrowse link
G KCNJ11 potassium inwardly rectifying channel subfamily J member 11 TAS
IMP
polymorphisms in the gene are linked to altered insulin secretion; E23K polymorphism appears to confer susceptibility to diabetes type-2 in Caucasian population
DNA:missense mutation::p.E23K (human)
RGD PMID:15565284 PMID:17259403 RGD:2313610, RGD:2313628 NCBI chr11:17,385,248...17,389,346
Ensembl chr11:17,365,172...17,389,331
JBrowse link
altered insulin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INS insulin TAS RGD PMID:9809695 RGD:2313694 NCBI chr11:2,159,779...2,161,209
Ensembl chr11:2,159,779...2,161,221
JBrowse link
G INSR insulin receptor TAS RGD PMID:9809695 RGD:2313694 NCBI chr19:7,112,265...7,294,414
Ensembl chr19:7,112,255...7,294,414
JBrowse link
altered leptin system pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INSR insulin receptor ISO increased basal hypothalamic leptin signaling without changes in leptin receptor expression after antisense-mediated hypothalamus-specific Insr knock-down RGD PMID:17585961 RGD:2290473 NCBI chr19:7,112,265...7,294,414
Ensembl chr19:7,112,255...7,294,414
JBrowse link
G LEP leptin TAS RGD PMID:15703762 RGD:1357910 NCBI chr 7:128,241,278...128,257,629
Ensembl chr 7:128,241,278...128,257,629
JBrowse link
G LEPR leptin receptor TAS
IMP
RGD PMID:15703762 PMID:17229951 RGD:1357910, RGD:1600611 NCBI chr 1:65,420,652...65,641,559
Ensembl chr 1:65,420,652...65,641,559
JBrowse link
altered melanocortin system pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRP agouti related neuropeptide TAS RGD PMID:15189116 RGD:1357925 NCBI chr16:67,482,571...67,483,547
Ensembl chr16:67,482,571...67,483,547
JBrowse link
G MC4R melanocortin 4 receptor TAS RGD PMID:15189116 RGD:1357925 NCBI chr18:60,371,062...60,372,775
Ensembl chr18:60,371,062...60,372,775
JBrowse link
G PCSK1 proprotein convertase subtilisin/kexin type 1 TAS RGD PMID:11874690 PMID:15189116 RGD:1357926, RGD:1357925 NCBI chr 5:96,390,333...96,433,248
Ensembl chr 5:96,390,333...96,434,143
JBrowse link
G POMC proopiomelanocortin TAS RGD PMID:11874690 PMID:15189116 RGD:1357926, RGD:1357925 NCBI chr 2:25,160,860...25,168,580
Ensembl chr 2:25,160,853...25,168,903
JBrowse link
G SDC1 syndecan 1 ISO RGD PMID:15189116 RGD:1357925 NCBI chr 2:20,200,797...20,225,475
Ensembl chr 2:20,200,797...20,225,433
JBrowse link
altered mitochondrial autophagy pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PINK1 PTEN induced kinase 1 TAS RGD PMID:24735649 RGD:10450527 NCBI chr 1:20,633,458...20,651,511
Ensembl chr 1:20,633,458...20,651,511
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase TAS RGD PMID:24735649 RGD:10450527 NCBI chr 6:161,347,417...162,727,766
Ensembl chr 6:161,347,417...162,727,775
JBrowse link
altered retinoid cycle metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 TAS RGD PMID:20212494 RGD:8547536 NCBI chr 1:93,992,834...94,121,148
Ensembl chr 1:93,992,834...94,121,148
JBrowse link
G LRAT lecithin retinol acyltransferase TAS RGD PMID:20212494 RGD:8547536 NCBI chr 4:154,740,838...154,753,120
Ensembl chr 4:154,626,945...154,753,120
JBrowse link
G RBP3 retinol binding protein 3 TAS RGD PMID:20212494 RGD:8547536 NCBI chr10:47,348,363...47,357,881
Ensembl chr10:47,348,363...47,357,881
JBrowse link
G RDH12 retinol dehydrogenase 12 TAS RGD PMID:20212494 RGD:8547536 NCBI chr14:67,701,886...67,734,451
Ensembl chr14:67,701,886...67,734,451
JBrowse link
G RLBP1 retinaldehyde binding protein 1 TAS RGD PMID:20212494 RGD:8547536 NCBI chr15:89,209,869...89,221,579
Ensembl chr15:89,209,869...89,221,614
JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 TAS RGD PMID:20212494 RGD:8547536 NCBI chr 1:68,428,822...68,449,954
Ensembl chr 1:68,428,822...68,449,954
JBrowse link
altered surfactant homeostasis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA3 ATP binding cassette subfamily A member 3 TAS RGD PMID:15985750 RGD:1549859 NCBI chr16:2,275,881...2,340,728
Ensembl chr16:2,275,881...2,340,746
JBrowse link
altered vascular endothelial growth factor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLT4 fms related receptor tyrosine kinase 4 TAS RGD PMID:15563310 RGD:1334463 NCBI chr 5:180,601,506...180,650,298
Ensembl chr 5:180,601,506...180,649,624
JBrowse link
altered vascular endothelial growth factor signaling pathway involving proteins affecting its expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDR kinase insert domain receptor ISO RGD PMID:18221855 RGD:2292019 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G VEGFA vascular endothelial growth factor A IDA RGD PMID:18221855 RGD:2292019 NCBI chr 6:43,770,211...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
altered vascular endothelial growth factor signaling pathway involving the main players term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLT4 fms related receptor tyrosine kinase 4 TAS RGD PMID:15563310 RGD:1334463 NCBI chr 5:180,601,506...180,650,298
Ensembl chr 5:180,601,506...180,649,624
JBrowse link
G KDR kinase insert domain receptor ISO RGD PMID:18221855 RGD:2292019 NCBI chr 4:55,078,481...55,125,595
Ensembl chr 4:55,078,481...55,125,595
JBrowse link
G VEGFA vascular endothelial growth factor A IDA RGD PMID:18221855 RGD:2292019 NCBI chr 6:43,770,211...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
altered visual phototransduction pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNGA1 cyclic nucleotide gated channel subunit alpha 1 TAS RGD PMID:20212494 RGD:8547536 NCBI chr 4:47,935,977...48,016,681
Ensembl chr 4:47,935,977...48,016,681
JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 TAS RGD PMID:20212494 RGD:8547536 NCBI chr16:57,882,340...57,971,128
Ensembl chr16:57,882,340...57,971,128
JBrowse link
G GUCA1B guanylate cyclase activator 1B TAS RGD PMID:20212494 RGD:8547536 NCBI chr 6:42,183,284...42,194,956
Ensembl chr 6:42,183,284...42,194,956
JBrowse link
G PDE6A phosphodiesterase 6A TAS RGD PMID:20212494 RGD:8547536 NCBI chr 5:149,857,953...149,944,793
Ensembl chr 5:149,857,953...149,944,793
JBrowse link
G PDE6B phosphodiesterase 6B TAS RGD PMID:20212494 RGD:8547536 NCBI chr 4:625,573...670,782
Ensembl chr 4:625,573...670,782
JBrowse link
G PDE6G phosphodiesterase 6G TAS RGD PMID:20212494 RGD:8547536 NCBI chr17:81,650,459...81,663,127
Ensembl chr17:81,650,459...81,663,112
JBrowse link
G RHO rhodopsin TAS RGD PMID:20212494 RGD:8547536 NCBI chr 3:129,528,639...129,535,344
Ensembl chr 3:129,528,639...129,535,344
JBrowse link
G SAG S-antigen visual arrestin TAS RGD PMID:20212494 RGD:8547536 NCBI chr 2:233,307,816...233,347,055
Ensembl chr 2:233,307,816...233,347,055
JBrowse link
angiotensin (1-7) signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme IDA RGD PMID:15283675 RGD:1598433 NCBI chr17:63,477,061...63,498,373
Ensembl chr17:63,477,061...63,498,380
JBrowse link
G ACE2 angiotensin converting enzyme 2 TAS RGD PMID:15638741 RGD:1581742 NCBI chr  X:15,518,197...15,607,211
Ensembl chr  X:15,494,566...15,607,236
JBrowse link
G AGT angiotensinogen ISO RGD PMID:15951342 RGD:1581938 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G MAS1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:16520407 RGD:1581931 NCBI chr 6:159,888,787...159,917,447
Ensembl chr 6:159,890,988...159,917,447
JBrowse link
G MME membrane metalloendopeptidase TAS RGD PMID:15638741 PMID:16520407 RGD:1581742, RGD:1581931 NCBI chr 3:155,024,202...155,183,729
Ensembl chr 3:155,024,124...155,183,704
JBrowse link
angiotensin II signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme TAS RGD PMID:15638741 RGD:1581742 NCBI chr17:63,477,061...63,498,373
Ensembl chr17:63,477,061...63,498,380
JBrowse link
G AGT angiotensinogen TAS RGD PMID:16141358 RGD:1581847 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:15590154 RGD:1579760 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISS RGD PMID:14657020 RGD:1566502 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974
JBrowse link
G CCL2 C-C motif chemokine ligand 2 ISS RGD PMID:14684844 RGD:1582323 NCBI chr17:34,255,285...34,257,203
Ensembl chr17:34,255,274...34,257,208
JBrowse link
G CMA1 chymase 1 TAS
ISO
RGD PMID:15638741 PMID:15869764 RGD:1581742, RGD:1581745 NCBI chr14:24,505,353...24,508,265
Ensembl chr14:24,505,353...24,508,265
JBrowse link
G JAK2 Janus kinase 2 ISO RGD PMID:16269269 RGD:1600094 NCBI chr 9:4,984,390...5,129,948
Ensembl chr 9:4,984,390...5,129,948
JBrowse link
G OLR1 oxidized low density lipoprotein receptor 1 ISS RGD PMID:12661921 RGD:1580992 NCBI chr12:10,158,301...10,176,266
Ensembl chr12:10,158,301...10,172,138
JBrowse link
G PDPK1 3-phosphoinositide dependent protein kinase 1 ISS RGD PMID:14585963 RGD:1581775 NCBI chr16:2,538,021...2,603,188
Ensembl chr16:2,537,979...2,603,188
JBrowse link
G PLA2G6 phospholipase A2 group VI ISO RGD PMID:17613534 RGD:12910844 NCBI chr22:38,111,495...38,181,830
Ensembl chr22:38,111,495...38,214,778
JBrowse link
G PRKCZ protein kinase C zeta ISO RGD PMID:16113073 RGD:1642674 NCBI chr 1:2,048,504...2,185,395
Ensembl chr 1:2,050,411...2,185,395
JBrowse link
angiotensin II signaling pathway via AT1 receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen TAS RGD PMID:16141358 RGD:1581847 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR1 angiotensin II receptor type 1 TAS
ISO
RGD PMID:10977869 PMID:12446719 PMID:9287353 PMID:14559250 RGD:1581825, RGD:629553, RGD:5133683, RGD:2316188 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
G AGTRAP angiotensin II receptor associated protein ISO RGD PMID:17875818 RGD:2314353 NCBI chr 1:11,736,136...11,750,769
Ensembl chr 1:11,736,084...11,754,802
JBrowse link
G ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 ISO RGD PMID:14559250 RGD:2316188 NCBI chr11:72,685,069...72,752,408
Ensembl chr11:72,685,069...72,793,599
JBrowse link
G ARRB1 arrestin beta 1 TAS RGD PMID:16304060 RGD:5133417 NCBI chr11:75,260,122...75,351,661
Ensembl chr11:75,260,122...75,351,705
JBrowse link
G ARRB2 arrestin beta 2 TAS RGD PMID:16304060 RGD:5133417 NCBI chr17:4,710,632...4,721,497
Ensembl chr17:4,710,596...4,721,499
JBrowse link
G GNA11 G protein subunit alpha 11 TAS RGD PMID:16141358 RGD:1581847 NCBI chr19:3,094,362...3,123,999
Ensembl chr19:3,094,362...3,123,999
JBrowse link
G GNAQ G protein subunit alpha q TAS RGD PMID:16141358 RGD:1581847 NCBI chr 9:77,716,097...78,031,811
Ensembl chr 9:77,716,097...78,031,811
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 TAS RGD PMID:16304060 RGD:5133417 NCBI chr11:67,266,473...67,286,556
Ensembl chr11:67,266,473...67,286,556
JBrowse link
G GRK3 G protein-coupled receptor kinase 3 TAS RGD PMID:16304060 RGD:5133417 NCBI chr22:25,564,675...25,729,294
Ensembl chr22:25,564,675...25,729,294
JBrowse link
G GRK5 G protein-coupled receptor kinase 5 TAS RGD PMID:16304060 RGD:5133417 NCBI chr10:119,207,571...119,459,745
Ensembl chr10:119,207,571...119,459,745
JBrowse link
G GRK6 G protein-coupled receptor kinase 6 TAS RGD PMID:16304060 RGD:5133417 NCBI chr 5:177,425,523...177,442,891
Ensembl chr 5:177,403,204...177,442,901
JBrowse link
G JAK2 Janus kinase 2 ISO RGD PMID:9287353 PMID:9314843 RGD:5133683, RGD:6478796 NCBI chr 9:4,984,390...5,129,948
Ensembl chr 9:4,984,390...5,129,948
JBrowse link
G RGS2 regulator of G protein signaling 2 TAS RGD PMID:12588881 RGD:5133418 NCBI chr 1:192,809,039...192,812,275
Ensembl chr 1:192,809,039...192,812,275
JBrowse link
G TYK2 tyrosine kinase 2 ISO RGD PMID:9314843 RGD:6478796 NCBI chr19:10,350,533...10,380,572
Ensembl chr19:10,350,533...10,380,608
JBrowse link
angiotensin II signaling pathway via AT2 receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen TAS RGD PMID:16286564 PMID:22949090 PMID:16286568 RGD:1582434, RGD:7401256, RGD:1582435 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR2 angiotensin II receptor type 2 TAS RGD PMID:10977869 PMID:22949090 RGD:1581825, RGD:7401256 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974
JBrowse link
G CNKSR1 connector enhancer of kinase suppressor of Ras 1 TAS RGD PMID:20889352 RGD:5133679 NCBI chr 1:26,177,491...26,189,884
Ensembl chr 1:26,177,484...26,189,884
JBrowse link
G DUSP1 dual specificity phosphatase 1 ISO RGD PMID:18804122 RGD:5133675 NCBI chr 5:172,768,096...172,771,195
Ensembl chr 5:172,768,096...172,771,195
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 TAS RGD PMID:20889352 RGD:5133679 NCBI chr12:56,080,108...56,103,505
Ensembl chr12:56,076,799...56,103,505
JBrowse link
G GNAI2 G protein subunit alpha i2 TAS RGD PMID:22949090 RGD:7401256 NCBI chr 3:50,227,068...50,263,358
Ensembl chr 3:50,226,292...50,259,362
JBrowse link
G GNAI3 G protein subunit alpha i3 TAS RGD PMID:22949090 RGD:7401256 NCBI chr 1:109,548,615...109,600,195
Ensembl chr 1:109,548,615...109,600,195
JBrowse link
G MTUS1 microtubule associated scaffold protein 1 TAS RGD PMID:20889352 RGD:5133679 NCBI chr 8:17,643,802...17,801,521
Ensembl chr 8:17,643,795...17,801,094
JBrowse link
G PTPN6 protein tyrosine phosphatase non-receptor type 6 ISO RGD PMID:18804122 RGD:5133675 NCBI chr12:6,946,577...6,961,316
Ensembl chr12:6,946,468...6,961,316
JBrowse link
G SLC9A6 solute carrier family 9 member A6 TAS RGD PMID:20889352 RGD:5133679 NCBI chr  X:135,973,837...136,047,269
Ensembl chr  X:135,973,841...136,047,269
JBrowse link
G TIMP3 TIMP metallopeptidase inhibitor 3 TAS RGD PMID:20889352 RGD:5133679 NCBI chr22:32,801,705...32,863,041
Ensembl chr22:32,801,705...32,863,041
JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 TAS RGD PMID:20889352 RGD:5133679 NCBI chr11:114,059,711...114,256,770
Ensembl chr11:114,059,041...114,256,765
JBrowse link
angiotensin III signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11295571 RGD:1582124 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:11295571 RGD:1582124 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:11295571 RGD:1582124 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974
JBrowse link
G ENPEP glutamyl aminopeptidase TAS RGD PMID:15638741 RGD:1581742 NCBI chr 4:110,476,155...110,565,285
Ensembl chr 4:110,365,733...110,565,285
JBrowse link
angiotensin III signaling pathway via AT1 receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11100981 RGD:1582152 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:11100981 RGD:1582152 NCBI chr 3:148,697,903...148,743,003
Ensembl chr 3:148,697,784...148,743,008
JBrowse link
angiotensin III signaling pathway via AT2 receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:16380540 RGD:1582118 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:16380540 RGD:1582118 NCBI chr  X:116,170,744...116,174,974
Ensembl chr  X:116,170,744...116,174,974
JBrowse link
angiotensin IV signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11282364 RGD:1582105 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
G ANPEP alanyl aminopeptidase, membrane TAS RGD PMID:15638741 RGD:1581742 NCBI chr15:89,784,895...89,814,852
Ensembl chr15:89,784,895...89,815,401
JBrowse link
G LNPEP leucyl and cystinyl aminopeptidase TAS RGD PMID:12591177 RGD:1581864 NCBI chr 5:96,936,080...97,037,513
Ensembl chr 5:96,935,394...97,037,513
JBrowse link
G RNPEP arginyl aminopeptidase ISO RGD PMID:16537183 RGD:1581649 NCBI chr 1:201,982,648...202,006,143
Ensembl chr 1:201,982,372...202,006,147
JBrowse link
angiotensin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen TAS RGD PMID:12676165 RGD:1566511 NCBI chr 1:230,702,523...230,745,583
Ensembl chr 1:230,690,776...230,745,576
JBrowse link
atrial natriuretic peptide signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CORIN corin, serine peptidase ISO RGD PMID:17485366 RGD:1626338 NCBI chr 4:47,594,001...47,838,067
Ensembl chr 4:47,593,999...47,838,106
JBrowse link
G NPPA natriuretic peptide A TAS
ISO
RGD PMID:15758553 PMID:12608696 PMID:16010968 RGD:1578335, RGD:1626242, RGD:1580001 NCBI chr 1:11,845,709...11,847,783
Ensembl chr 1:11,845,709...11,848,345
JBrowse link
G NPR1 natriuretic peptide receptor 1 ISO RGD PMID:7552344 RGD:1626243 NCBI chr 1:153,678,688...153,693,992
Ensembl chr 1:153,678,688...153,693,992
JBrowse link
beta-barrel pathway of mitochondrial protein import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTX1 metaxin 1 TAS RGD PMID:25305573 RGD:10412662 NCBI chr 1:155,208,695...155,213,839
Ensembl chr 1:155,208,695...155,213,824
JBrowse link
G MTX2 metaxin 2 TAS RGD PMID:25305573 RGD:10412662 NCBI chr 2:176,269,442...176,338,025
Ensembl chr 2:176,269,395...176,338,025
JBrowse link
G SAMM50 SAMM50 sorting and assembly machinery component TAS RGD PMID:25305573 RGD:10412662 NCBI chr22:43,955,442...43,996,529
Ensembl chr22:43,955,442...44,010,531
JBrowse link
G TIMM10 translocase of inner mitochondrial membrane 10 TAS RGD PMID:25305573 RGD:10412662 NCBI chr11:57,528,464...57,530,754
Ensembl chr11:57,528,464...57,530,803
JBrowse link
G TIMM13 translocase of inner mitochondrial membrane 13 TAS RGD PMID:25305573 RGD:10412662 NCBI chr19:2,425,625...2,427,586
Ensembl chr19:2,425,625...2,427,586
JBrowse link
G TIMM8A translocase of inner mitochondrial membrane 8A TAS RGD PMID:25305573 RGD:10412662 NCBI chr  X:101,345,661...101,348,742
Ensembl chr  X:101,345,661...101,348,742
JBrowse link
G TIMM8B translocase of inner mitochondrial membrane 8 homolog B TAS RGD PMID:25305573 RGD:10412662 NCBI chr11:112,084,800...112,086,756
Ensembl chr11:112,084,800...112,086,798
JBrowse link
G TIMM9 translocase of inner mitochondrial membrane 9 TAS RGD PMID:25305573 RGD:10412662 NCBI chr14:58,408,494...58,427,531
Ensembl chr14:58,408,495...58,427,531
JBrowse link
G TOMM20 translocase of outer mitochondrial membrane 20 TAS RGD PMID:25305573 RGD:10412662 NCBI chr 1:235,109,341...235,128,837
Ensembl chr 1:235,109,341...235,128,837
JBrowse link
G TOMM22 translocase of outer mitochondrial membrane 22 TAS RGD PMID:25305573 RGD:10412662 NCBI chr22:38,681,957...38,685,421
Ensembl chr22:38,681,957...38,685,421
JBrowse link
G TOMM40 translocase of outer mitochondrial membrane 40 TAS RGD PMID:25305573 RGD:10412662 NCBI chr19:44,891,254...44,903,689
Ensembl chr19:44,890,569...44,903,689
JBrowse link
G TOMM5 translocase of outer mitochondrial membrane 5 TAS RGD PMID:25305573 RGD:10412662 NCBI chr 9:37,588,413...37,592,597
Ensembl chr 9:37,582,646...37,592,604
JBrowse link
G TOMM6 translocase of outer mitochondrial membrane 6 TAS RGD PMID:25305573 RGD:10412662 NCBI chr 6:41,787,694...41,789,895
Ensembl chr 6:41,787,662...41,789,898
JBrowse link
G TOMM7 translocase of outer mitochondrial membrane 7 TAS RGD PMID:25305573 RGD:10412662 NCBI chr 7:22,812,974...22,822,849
Ensembl chr 7:22,812,628...22,822,849
JBrowse link
G TOMM70 translocase of outer mitochondrial membrane 70 TAS RGD PMID:25305573 RGD:10412662 NCBI chr 3:100,363,431...100,401,089
Ensembl chr 3:100,363,431...100,401,089
JBrowse link
brain natriuretic peptide signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPPB natriuretic peptide B ISO RGD PMID:7552344 RGD:1626243 NCBI chr 1:11,857,464...11,858,945
Ensembl chr 1:11,857,464...11,858,945
JBrowse link
G NPR1 natriuretic peptide receptor 1 ISO RGD PMID:7552344 RGD:1626243 NCBI chr 1:153,678,688...153,693,992
Ensembl chr 1:153,678,688...153,693,992
JBrowse link
C-type natriuretic peptide signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPPC natriuretic peptide C ISO
TAS
RGD PMID:15337698 PMID:16537417 RGD:1580149, RGD:1601488 NCBI chr 2:231,921,809...231,926,396
Ensembl chr 2:231,921,809...231,926,396
JBrowse link
G NPR2 natriuretic peptide receptor 2 ISO RGD PMID:16537417 RGD:1601488 NCBI chr 9:35,791,591...35,809,731
Ensembl chr 9:35,791,003...35,809,732
JBrowse link
G NPR3 natriuretic peptide receptor 3 ISS RGD PMID:15044621 RGD:1581459 NCBI chr 5:32,690,872...32,791,720
Ensembl chr 5:32,689,070...32,791,724
JBrowse link
calcineurin signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NFATC2 nuclear factor of activated T cells 2 TAS RGD PMID:15336966 RGD:1579951 NCBI chr20:51,386,963...51,562,839
Ensembl chr20:51,386,957...51,562,831
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 TAS RGD PMID:15336966 RGD:1579951 NCBI chr16:68,085,370...68,229,259
Ensembl chr16:68,084,751...68,229,259
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 TAS RGD PMID:15336966 RGD:1579951 NCBI chr14:24,366,911...24,379,604
Ensembl chr14:24,365,673...24,379,604
JBrowse link
G PPP3CA protein phosphatase 3 catalytic subunit alpha TAS RGD PMID:15336966 RGD:1579951 NCBI chr 4:101,023,418...101,347,526
Ensembl chr 4:101,023,409...101,348,278
JBrowse link
G PPP3CB protein phosphatase 3 catalytic subunit beta TAS RGD PMID:15336966 RGD:1579951 NCBI chr10:73,436,433...73,496,024
Ensembl chr10:73,436,433...73,496,024
JBrowse link
G PPP3CC protein phosphatase 3 catalytic subunit gamma TAS RGD PMID:15336966 RGD:1579951 NCBI chr 8:22,441,078...22,541,125
Ensembl chr 8:22,440,819...22,541,142
JBrowse link
G PPP3R1 protein phosphatase 3 regulatory subunit B, alpha TAS RGD PMID:15336966 RGD:1579951 NCBI chr 2:68,178,857...68,252,532
Ensembl chr 2:68,178,857...68,256,237
JBrowse link
G PPP3R2 protein phosphatase 3 regulatory subunit B, beta TAS RGD PMID:15336966 RGD:1579951 NCBI chr 9:101,591,604...101,594,969
Ensembl chr 9:101,591,604...101,595,021
JBrowse link
G RCAN1 regulator of calcineurin 1 ISO RGD PMID:16415348 RGD:1581652 NCBI chr21:34,516,442...34,615,113
Ensembl chr21:34,513,142...34,615,113
JBrowse link
calcium signaling pathway via the calcium-sensing receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARRB1 arrestin beta 1 IDA
ISO
RGD PMID:15637145 PMID:22192592 RGD:7207060, RGD:7207059 NCBI chr11:75,260,122...75,351,661
Ensembl chr11:75,260,122...75,351,705
JBrowse link
G ARRB2 arrestin beta 2 IDA
ISO
RGD PMID:15637145 PMID:22192592 RGD:7207060, RGD:7207059 NCBI chr17:4,710,632...4,721,497
Ensembl chr17:4,710,596...4,721,499
JBrowse link
G CASR calcium sensing receptor ISO RGD PMID:22192592 PMID:12239094 PMID:15637145 RGD:7207059, RGD:7207227, RGD:7207060 NCBI chr 3:122,183,668...122,291,629
Ensembl chr 3:122,183,668...122,291,629
JBrowse link
G FLNA filamin A IMP RGD PMID:12239094 RGD:7207227 NCBI chr  X:154,348,531...154,374,634
Ensembl chr  X:154,348,524...154,374,634
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 IDA RGD PMID:15637145 RGD:7207060 NCBI chr11:67,266,473...67,286,556
Ensembl chr11:67,266,473...67,286,556
JBrowse link
G GRK3 G protein-coupled receptor kinase 3 IDA RGD PMID:15637145 RGD:7207060 NCBI chr22:25,564,675...25,729,294
Ensembl chr22:25,564,675...25,729,294
JBrowse link
G GRK4 G protein-coupled receptor kinase 4 IDA RGD PMID:15637145 RGD:7207060 NCBI chr 4:2,963,571...3,040,760
Ensembl chr 4:2,963,571...3,040,760
JBrowse link
G RGS12 regulator of G protein signaling 12 TAS RGD PMID:12239094 RGD:7207227 NCBI chr 4:3,285,891...3,439,913
Ensembl chr 4:3,293,021...3,439,913
JBrowse link
G RGS2 regulator of G protein signaling 2 IEP RGD PMID:12239094 RGD:7207227 NCBI chr 1:192,809,039...192,812,275
Ensembl chr 1:192,809,039...192,812,275
JBrowse link
G RGS4 regulator of G protein signaling 4 IEP RGD PMID:12239094 RGD:7207227 NCBI chr 1:163,068,871...163,076,802
Ensembl chr 1:163,068,775...163,076,802
JBrowse link
G RGS5 regulator of G protein signaling 5 IEP RGD PMID:21393447 RGD:7207228 NCBI chr 1:163,142,299...163,321,735
Ensembl chr 1:163,111,121...163,321,791
Ensembl chr 1:163,111,121...163,321,791
JBrowse link
G RHOA ras homolog family member A IMP RGD PMID:12239094 RGD:7207227 NCBI chr 3:49,359,145...49,411,976
Ensembl chr 3:49,359,139...49,412,998
JBrowse link
calcium transport pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2A1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 TAS RGD PMID:19789383 RGD:7204695 NCBI chr16:28,878,488...28,904,466
Ensembl chr16:28,878,405...28,904,466
JBrowse link
G ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 TAS RGD PMID:19789383 RGD:7204695 NCBI chr12:110,280,616...110,351,093
Ensembl chr12:110,280,756...110,351,093
JBrowse link
G ATP2A3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 TAS RGD PMID:19789383 RGD:7204695 NCBI chr17:3,923,873...3,964,437
Ensembl chr17:3,923,870...3,964,464
JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 TAS RGD PMID:19789383 RGD:7204695 NCBI chr12:89,588,049...89,709,366
Ensembl chr12:89,588,049...89,709,366
JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 TAS RGD PMID:19789383 RGD:7204695 NCBI chr 3:10,324,023...10,708,007
Ensembl chr 3:10,324,023...10,708,007
JBrowse link
G ATP2B3 ATPase plasma membrane Ca2+ transporting 3 TAS RGD PMID:19789383 RGD:7204695 NCBI chr  X:153,517,642...153,582,929
Ensembl chr  X:153,517,642...153,582,939
JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 TAS RGD PMID:19789383 RGD:7204695 NCBI chr 1:203,626,832...203,744,081
Ensembl chr 1:203,626,832...203,744,081
JBrowse link
G ATP2C1 ATPase secretory pathway Ca2+ transporting 1 TAS RGD PMID:19789383 RGD:7204695 NCBI chr 3:130,850,595...131,016,712
Ensembl chr 3:130,850,595...131,016,712
JBrowse link
G ATP2C2 ATPase secretory pathway Ca2+ transporting 2 TAS RGD PMID:19789383 RGD:7204695 NCBI chr16:84,368,538...84,464,187
Ensembl chr16:84,368,527...84,464,187
JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A TAS RGD PMID:21746798 RGD:7204688 NCBI chr19:13,206,442...13,506,479
Ensembl chr19:13,206,442...13,633,025
JBrowse link
G CACNA1B calcium voltage-gated channel subunit alpha1 B TAS RGD PMID:21746798 RGD:7204688 NCBI chr 9:137,877,782...138,124,619
Ensembl chr 9:137,877,782...138,124,624
JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C TAS RGD PMID:21746798 RGD:7204688 NCBI chr12:1,970,780...2,697,950
Ensembl chr12:1,970,772...2,697,950
JBrowse link
G CACNA1D calcium voltage-gated channel subunit alpha1 D TAS RGD PMID:21746798 RGD:7204688 NCBI chr 3:53,494,611...53,813,733
Ensembl chr 3:53,328,963...53,813,733
JBrowse link
G CACNA1E calcium voltage-gated channel subunit alpha1 E TAS RGD PMID:21746798 RGD:7204688 NCBI chr 1:181,317,699...181,808,084
Ensembl chr 1:181,317,690...181,813,262
JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F TAS RGD PMID:21746798 RGD:7204688 NCBI chr  X:49,205,063...49,233,340
Ensembl chr  X:49,205,063...49,233,371
JBrowse link
G CACNA1G calcium voltage-gated channel subunit alpha1 G TAS RGD PMID:21746798 RGD:7204688 NCBI chr17:50,560,715...50,627,474
Ensembl chr17:50,560,715...50,627,474
JBrowse link
G CACNA1H calcium voltage-gated channel subunit alpha1 H TAS RGD PMID:21746798 RGD:7204688 NCBI chr16:1,153,106...1,221,768
Ensembl chr16:1,153,106...1,221,771
JBrowse link
G CACNA1I calcium voltage-gated channel subunit alpha1 I TAS RGD PMID:21746798 RGD:7204688 NCBI chr22:39,570,753...39,689,735
Ensembl chr22:39,570,753...39,689,735
JBrowse link
G CACNA1S calcium voltage-gated channel subunit alpha1 S TAS RGD PMID:21746798 RGD:7204688 NCBI chr 1:201,039,512...201,112,426
Ensembl chr 1:201,039,512...201,112,451
JBrowse link
G CACNB1 calcium voltage-gated channel auxiliary subunit beta 1 TAS RGD PMID:21746798 RGD:7204688 NCBI chr17:39,173,453...39,197,669
Ensembl chr17:39,173,453...39,197,702
JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 TAS RGD PMID:21746798 RGD:7204688 NCBI chr10:18,140,424...18,543,557
Ensembl chr10:18,140,424...18,543,557
JBrowse link
G CACNB3 calcium voltage-gated channel auxiliary subunit beta 3 TAS RGD PMID:21746798 RGD:7204688 NCBI chr12:48,814,480...48,828,941
Ensembl chr12:48,813,794...48,828,941
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 TAS RGD PMID:21746798 RGD:7204688 NCBI chr 2:151,832,771...152,099,167
Ensembl chr 2:151,832,771...152,099,167
JBrowse link
G CNGA1 cyclic nucleotide gated channel subunit alpha 1 TAS RGD PMID:12087135 RGD:6893549 NCBI chr 4:47,935,977...48,016,681
Ensembl chr 4:47,935,977...48,016,681
JBrowse link
G CNGA2 cyclic nucleotide gated channel subunit alpha 2 TAS RGD PMID:12087135 RGD:6893549 NCBI chr  X:151,734,746...151,745,564
Ensembl chr  X:151,734,746...151,745,564
JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 TAS RGD PMID:12087135 RGD:6893549 NCBI chr 2:98,346,456...98,398,601
Ensembl chr 2:98,346,188...98,398,601
JBrowse link
G CNGA4 cyclic nucleotide gated channel subunit alpha 4 TAS RGD PMID:12087135 RGD:6893549 NCBI chr11:6,234,793...6,244,976
Ensembl chr11:6,234,765...6,244,479
JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 TAS RGD PMID:12087135 RGD:6893549 NCBI chr16:57,882,340...57,971,128
Ensembl chr16:57,882,340...57,971,128
JBrowse link
G CNGB3 cyclic nucleotide gated channel subunit beta 3 TAS RGD PMID:12087135 RGD:6893549 NCBI chr 8:86,574,179...86,743,634
Ensembl chr 8:86,553,977...86,743,675
JBrowse link
G ITPR1 inositol 1,4,5-trisphosphate receptor type 1 TAS RGD PMID:19133301 RGD:7204693 NCBI chr 3:4,493,348...4,847,506
Ensembl chr 3:4,493,345...4,847,506
JBrowse link
G ITPR2 inositol 1,4,5-trisphosphate receptor type 2 TAS RGD PMID:19133301 RGD:7204693 NCBI chr12:26,335,352...26,833,194
Ensembl chr12:26,335,352...26,833,194
JBrowse link
G ITPR3 inositol 1,4,5-trisphosphate receptor type 3 TAS RGD PMID:19133301 RGD:7204693 NCBI chr 6:33,621,322...33,696,562
Ensembl chr 6:33,620,365...33,696,574
JBrowse link
G MCOLN1 mucolipin TRP cation channel 1 TAS RGD PMID:20716668 RGD:7204689 NCBI chr19:7,522,624...7,534,009
Ensembl chr19:7,522,624...7,534,009
JBrowse link
G MCU mitochondrial calcium uniporter TAS RGD PMID:22850819 RGD:7204696 NCBI chr10:72,692,143...72,887,694
Ensembl chr10:72,692,143...72,887,694
JBrowse link
G ORAI1 ORAI calcium release-activated calcium modulator 1 TAS RGD PMID:22914293 RGD:7204692 NCBI chr12:121,626,550...121,642,040
Ensembl chr12:121,626,509...121,643,218
JBrowse link
G ORAI2 ORAI calcium release-activated calcium modulator 2 TAS RGD PMID:22914293 RGD:7204692 NCBI chr 7:102,433,575...102,456,825
Ensembl chr 7:102,433,106...102,456,825
JBrowse link
G ORAI3 ORAI calcium release-activated calcium modulator 3 TAS RGD PMID:22914293 RGD:7204692 NCBI chr16:30,949,068...30,954,938
Ensembl chr16:30,949,068...30,956,461
JBrowse link
G RYR1 ryanodine receptor 1 TAS RGD PMID:20961976 RGD:7204694 NCBI chr19:38,433,691...38,587,564
Ensembl chr19:38,433,691...38,595,273
JBrowse link
G RYR2 ryanodine receptor 2 TAS RGD PMID:20961976 RGD:7204694 NCBI chr 1:237,042,184...237,833,988
Ensembl chr 1:237,042,184...237,833,988
JBrowse link
G RYR3 ryanodine receptor 3 TAS RGD PMID:20961976 RGD:7204694 NCBI chr15:33,310,967...33,866,102
Ensembl chr15:33,310,962...33,866,121
JBrowse link
G SLC24A1 solute carrier family 24 member 1 TAS RGD PMID:17716241 RGD:7204698 NCBI chr15:65,611,350...65,661,002
Ensembl chr15:65,611,366...65,660,995
JBrowse link
G SLC24A2 solute carrier family 24 member 2 TAS RGD PMID:17716241 RGD:7204698 NCBI chr 9:19,507,455...20,307,892
Ensembl chr 9:19,507,452...19,789,037
JBrowse link
G SLC24A3 solute carrier family 24 member 3 TAS RGD PMID:17716241 RGD:7204698 NCBI chr20:19,212,642...19,722,926
Ensembl chr20:19,212,642...19,722,926
JBrowse link
G SLC24A4 solute carrier family 24 member 4 TAS RGD PMID:17716241 RGD:7204698 NCBI chr14:92,322,581...92,501,481
Ensembl chr14:92,322,581...92,501,481
JBrowse link
G SLC24A5 solute carrier family 24 member 5 TAS RGD PMID:17716241 RGD:7204698 NCBI chr15:48,120,990...48,142,672
Ensembl chr15:48,120,990...48,142,672
JBrowse link
G SLC8A1 solute carrier family 8 member A1 TAS RGD PMID:17716241 RGD:7204698 NCBI chr 2:40,097,270...40,512,435
Ensembl chr 2:40,097,270...40,611,053
JBrowse link
G SLC8A2 solute carrier family 8 member A2 TAS RGD PMID:17716241 RGD:7204698 NCBI chr19:47,428,017...47,471,893
Ensembl chr19:47,428,017...47,471,893
JBrowse link
G SLC8A3 solute carrier family 8 member A3 TAS RGD PMID:17716241 RGD:7204698 NCBI chr14:70,044,215...70,189,405
Ensembl chr14:70,044,215...70,189,480
JBrowse link
G SLC8B1 solute carrier family 8 member B1 TAS RGD PMID:22850819 RGD:7204696 NCBI chr12:113,298,771...113,335,109
Ensembl chr12:113,298,759...113,359,493
JBrowse link
G STIM1 stromal interaction molecule 1 TAS RGD PMID:22914293 RGD:7204692 NCBI chr11:3,854,604...4,093,210
Ensembl chr11:3,854,527...4,093,210
JBrowse link
G STIM2 stromal interaction molecule 2 TAS RGD PMID:22914293 RGD:7204692 NCBI chr 4:26,860,841...27,025,381
Ensembl chr 4:26,857,601...27,025,381
JBrowse link
G TPCN1 two pore segment channel 1 TAS RGD PMID:20018950 RGD:7204697 NCBI chr12:113,221,464...113,298,585
Ensembl chr12:113,221,050...113,298,585
JBrowse link
G TPCN2 two pore segment channel 2 TAS RGD PMID:20018950 RGD:7204697 NCBI chr11:69,048,932...69,090,597
Ensembl chr11:69,048,932...69,136,316
JBrowse link
G TRPV5 transient receptor potential cation channel subfamily V member 5 TAS RGD PMID:20716668 RGD:7204689 NCBI chr 7:142,908,101...142,933,746
Ensembl chr 7:142,908,101...142,933,746
JBrowse link
G TRPV6 transient receptor potential cation channel subfamily V member 6 TAS RGD PMID:20716668 RGD:7204689 NCBI chr 7:142,871,208...142,885,745
Ensembl chr 7:142,871,208...142,885,745
JBrowse link
calcium/calcium-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2A1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 TAS RGD PMID:19789383 RGD:7204695 NCBI chr16:28,878,488...28,904,466
Ensembl chr16:28,878,405...28,904,466
JBrowse link
G ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 TAS RGD PMID:19789383 RGD:7204695 NCBI chr12:110,280,616...110,351,093
Ensembl chr12:110,280,756...110,351,093
JBrowse link
G ATP2A3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 TAS RGD PMID:19789383 RGD:7204695 NCBI chr17:3,923,873...3,964,437
Ensembl chr17:3,923,870...3,964,464
JBrowse link
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 TAS RGD PMID:19789383 RGD:7204695 NCBI chr12:89,588,049...89,709,366
Ensembl chr12:89,588,049...89,709,366
JBrowse link
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 TAS RGD PMID:19789383 RGD:7204695 NCBI chr 3:10,324,023...10,708,007
Ensembl chr 3:10,324,023...10,708,007
JBrowse link
G ATP2B3 ATPase plasma membrane Ca2+ transporting 3 TAS RGD PMID:19789383 RGD:7204695 NCBI chr  X:153,517,642...153,582,929
Ensembl chr  X:153,517,642...153,582,939
JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 TAS RGD PMID:19789383 RGD:7204695 NCBI chr 1:203,626,832...203,744,081
Ensembl chr 1:203,626,832...203,744,081
JBrowse link
G ATP2C1 ATPase secretory pathway Ca2+ transporting 1 TAS RGD PMID:19789383 RGD:7204695 NCBI chr 3:130,850,595...131,016,712
Ensembl chr 3:130,850,595...131,016,712
JBrowse link
G ATP2C2 ATPase secretory pathway Ca2+ transporting 2 TAS RGD PMID:19789383 RGD:7204695 NCBI chr16:84,368,538...84,464,187
Ensembl chr16:84,368,527...84,464,187
JBrowse link
G CABP1 calcium binding protein 1 TAS RGD PMID:20668007 RGD:7204681 NCBI chr12:120,640,626...120,680,866
Ensembl chr12:120,640,626...120,667,324
JBrowse link
G CABP2 calcium binding protein 2 TAS RGD PMID:20668007 RGD:7204681 NCBI chr11:67,518,912...67,523,446
Ensembl chr11:67,518,912...67,524,517
JBrowse link
G CABP4 calcium binding protein 4 TAS RGD PMID:20668007 RGD:7204681 NCBI chr11:67,452,403...67,461,752
Ensembl chr11:67,452,406...67,461,752
JBrowse link
G CACNA1A calcium voltage-gated channel subunit alpha1 A TAS RGD PMID:21746798 RGD:7204688 NCBI chr19:13,206,442...13,506,479
Ensembl chr19:13,206,442...13,633,025
JBrowse link
G CACNA1B calcium voltage-gated channel subunit alpha1 B TAS RGD PMID:21746798 RGD:7204688 NCBI chr 9:137,877,782...138,124,619
Ensembl chr 9:137,877,782...138,124,624
JBrowse link
G CACNA1C calcium voltage-gated channel subunit alpha1 C TAS RGD PMID:21746798 RGD:7204688 NCBI chr12:1,970,780...2,697,950
Ensembl chr12:1,970,772...2,697,950
JBrowse link
G CACNA1D calcium voltage-gated channel subunit alpha1 D TAS RGD PMID:21746798 RGD:7204688 NCBI chr 3:53,494,611...53,813,733
Ensembl chr 3:53,328,963...53,813,733
JBrowse link
G CACNA1E calcium voltage-gated channel subunit alpha1 E TAS RGD PMID:21746798 RGD:7204688 NCBI chr 1:181,317,699...181,808,084
Ensembl chr 1:181,317,690...181,813,262
JBrowse link
G CACNA1F calcium voltage-gated channel subunit alpha1 F TAS RGD PMID:21746798 RGD:7204688 NCBI chr  X:49,205,063...49,233,340
Ensembl chr  X:49,205,063...49,233,371
JBrowse link
G CACNA1G calcium voltage-gated channel subunit alpha1 G TAS RGD PMID:21746798 RGD:7204688 NCBI chr17:50,560,715...50,627,474
Ensembl chr17:50,560,715...50,627,474
JBrowse link
G CACNA1H calcium voltage-gated channel subunit alpha1 H TAS RGD PMID:21746798 RGD:7204688 NCBI chr16:1,153,106...1,221,768
Ensembl chr16:1,153,106...1,221,771
JBrowse link
G CACNA1I calcium voltage-gated channel subunit alpha1 I TAS RGD PMID:21746798 RGD:7204688 NCBI chr22:39,570,753...39,689,735
Ensembl chr22:39,570,753...39,689,735
JBrowse link
G CACNA1S calcium voltage-gated channel subunit alpha1 S TAS RGD PMID:21746798 RGD:7204688 NCBI chr 1:201,039,512...201,112,426
Ensembl chr 1:201,039,512...201,112,451
JBrowse link
G CACNB1 calcium voltage-gated channel auxiliary subunit beta 1 TAS RGD PMID:21746798 RGD:7204688 NCBI chr17:39,173,453...39,197,669
Ensembl chr17:39,173,453...39,197,702
JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 TAS RGD PMID:21746798 RGD:7204688 NCBI chr10:18,140,424...18,543,557
Ensembl chr10:18,140,424...18,543,557
JBrowse link
G CACNB3 calcium voltage-gated channel auxiliary subunit beta 3 TAS RGD PMID:21746798 RGD:7204688 NCBI chr12:48,814,480...48,828,941
Ensembl chr12:48,813,794...48,828,941
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 TAS RGD PMID:21746798 RGD:7204688 NCBI chr 2:151,832,771...152,099,167
Ensembl chr 2:151,832,771...152,099,167
JBrowse link
G CALB1 calbindin 1 TAS RGD PMID:20943758 RGD:7204685 NCBI chr 8:90,058,608...90,082,879
Ensembl chr 8:90,058,608...90,095,475
JBrowse link
G CALB2 calbindin 2 TAS RGD PMID:20943758 RGD:7204685 NCBI chr16:71,358,723...71,390,433
Ensembl chr16:71,358,713...71,390,436
JBrowse link
G CALM1 calmodulin 1 TAS RGD PMID:10884684 PMID:18083096 RGD:7204676, RGD:7204677 NCBI chr14:90,396,502...90,408,268
Ensembl chr14:90,396,502...90,408,268
JBrowse link
G CALM2 calmodulin 2 TAS RGD PMID:10884684 PMID:18083096 RGD:7204676, RGD:7204677 NCBI chr 2:47,160,082...47,176,936
Ensembl chr 2:47,160,084...47,176,921
JBrowse link
G CALM3 calmodulin 3 TAS RGD PMID:10884684 PMID:18083096 RGD:7204676, RGD:7204677 NCBI chr19:46,601,074...46,610,782
Ensembl chr19:46,601,074...46,610,782
JBrowse link
G CALR calreticulin TAS RGD PMID:20356453 RGD:7204686 NCBI chr19:12,938,609...12,944,489
Ensembl chr19:12,938,578...12,944,489
JBrowse link
G CASQ1 calsequestrin 1 TAS RGD PMID:20356453 RGD:7204686 NCBI chr 1:160,190,575...160,201,886
Ensembl chr 1:160,190,575...160,201,886
JBrowse link
G CASQ2 calsequestrin 2 TAS RGD PMID:20356453 RGD:7204686 NCBI chr 1:115,700,021...115,768,714
Ensembl chr 1:115,700,021...115,768,714
JBrowse link
G CIMIP3 ciliary microtubule inner protein 3 TAS RGD PMID:20668007 RGD:7204681 NCBI chr 6:42,155,406...42,163,418
Ensembl chr 6:42,155,406...42,163,418
JBrowse link
G CNGA1 cyclic nucleotide gated channel subunit alpha 1 TAS RGD PMID:22435804 RGD:7204690 NCBI chr 4:47,935,977...48,016,681
Ensembl chr 4:47,935,977...48,016,681
JBrowse link
G CNGA2 cyclic nucleotide gated channel subunit alpha 2 TAS RGD PMID:22435804 RGD:7204690 NCBI chr  X:151,734,746...151,745,564
Ensembl chr  X:151,734,746...151,745,564
JBrowse link
G CNGA3 cyclic nucleotide gated channel subunit alpha 3 TAS RGD PMID:22435804 RGD:7204690 NCBI chr 2:98,346,456...98,398,601
Ensembl chr 2:98,346,188...98,398,601
JBrowse link
G CNGA4 cyclic nucleotide gated channel subunit alpha 4 TAS RGD PMID:22435804 RGD:7204690 NCBI chr11:6,234,793...6,244,976
Ensembl chr11:6,234,765...6,244,479
JBrowse link
G CNGB1 cyclic nucleotide gated channel subunit beta 1 TAS RGD PMID:22435804 RGD:7204690 NCBI chr16:57,882,340...57,971,128
Ensembl chr16:57,882,340...57,971,128
JBrowse link
G CNGB3 cyclic nucleotide gated channel subunit beta 3 TAS RGD PMID:22435804 RGD:7204690 NCBI chr 8:86,574,179...86,743,634
Ensembl chr 8:86,553,977...86,743,675
JBrowse link
G GUCA1B guanylate cyclase activator 1B TAS RGD PMID:20668007 RGD:7204681 NCBI chr 6:42,183,284...42,194,956
Ensembl chr 6:42,183,284...42,194,956
JBrowse link
G GUCA2B guanylate cyclase activator 2B TAS RGD PMID:20668007 RGD:7204681 NCBI chr 1:42,153,410...42,155,820
Ensembl chr 1:42,153,410...42,155,820
JBrowse link
G ITPR1 inositol 1,4,5-trisphosphate receptor type 1 TAS RGD PMID:19133301 RGD:7204693 NCBI chr 3:4,493,348...4,847,506
Ensembl chr 3:4,493,345...4,847,506
JBrowse link
G ITPR2 inositol 1,4,5-trisphosphate receptor type 2 TAS RGD PMID:19133301 RGD:7204693 NCBI chr12:26,335,352...26,833,194
Ensembl chr12:26,335,352...26,833,194
JBrowse link
G ITPR3 inositol 1,4,5-trisphosphate receptor type 3 TAS RGD PMID:19133301 RGD:7204693 NCBI chr 6:33,621,322...33,696,562
Ensembl chr 6:33,620,365...33,696,574
JBrowse link
G KCNIP1 potassium voltage-gated channel interacting protein 1 TAS RGD PMID:20668007 RGD:7204681 NCBI chr 5:170,353,487...170,736,632
Ensembl chr 5:170,353,487...170,736,632
JBrowse link
G KCNIP2 potassium voltage-gated channel interacting protein 2 TAS RGD PMID:20668007 RGD:7204681 NCBI chr10:101,825,974...101,843,800
Ensembl chr10:101,825,974...101,843,920
JBrowse link
G KCNIP3 potassium voltage-gated channel interacting protein 3 TAS RGD PMID:20668007 RGD:7204681 NCBI chr 2:95,297,347...95,386,077
Ensembl chr 2:95,297,327...95,386,077
JBrowse link
G KCNIP4 potassium voltage-gated channel interacting protein 4 TAS RGD PMID:20668007 RGD:7204681 NCBI chr 4:20,728,606...21,948,772
Ensembl chr 4:20,728,606...21,948,772
JBrowse link
G KCNN1 potassium calcium-activated channel subfamily N member 1 TAS RGD PMID:21942705 RGD:7204683 NCBI chr19:17,951,290...18,000,085
Ensembl chr19:17,951,293...18,000,085
JBrowse link
G KCNN2 potassium calcium-activated channel subfamily N member 2 TAS RGD PMID:21942705 RGD:7204683 NCBI chr 5:114,055,978...114,496,496
Ensembl chr 5:114,055,926...114,496,500
JBrowse link
G KCNN3 potassium calcium-activated channel subfamily N member 3 TAS RGD PMID:21942705 RGD:7204683 NCBI chr 1:154,697,455...154,870,281
Ensembl chr 1:154,697,455...154,870,281
JBrowse link
G KCNN4 potassium calcium-activated channel subfamily N member 4 TAS RGD PMID:21942705 RGD:7204683 NCBI chr19:43,766,533...43,780,973
Ensembl chr19:43,766,533...43,780,976
JBrowse link
G MCOLN1 mucolipin TRP cation channel 1 TAS RGD PMID:20716668 RGD:7204689 NCBI chr19:7,522,624...7,534,009
Ensembl chr19:7,522,624...7,534,009
JBrowse link
G MCU mitochondrial calcium uniporter TAS RGD PMID:22850819 RGD:7204696 NCBI chr10:72,692,143...72,887,694
Ensembl chr10:72,692,143...72,887,694
JBrowse link
G NCS1 neuronal calcium sensor 1 TAS RGD PMID:20668007 RGD:7204681 NCBI chr 9:130,172,404...130,237,303
Ensembl chr 9:130,172,404...130,237,303
JBrowse link
G OCM oncomodulin TAS RGD PMID:20943758 RGD:7204685 NCBI chr 7:5,859,718...5,886,363
Ensembl chr 7:5,879,827...5,886,363
JBrowse link
G ORAI1 ORAI calcium release-activated calcium modulator 1 TAS RGD PMID:22914293 RGD:7204692 NCBI chr12:121,626,550...121,642,040
Ensembl chr12:121,626,509...121,643,218
JBrowse link
G ORAI2 ORAI calcium release-activated calcium modulator 2 TAS RGD PMID:22914293 RGD:7204692 NCBI chr 7:102,433,575...102,456,825
Ensembl chr 7:102,433,106...102,456,825
JBrowse link
G ORAI3 ORAI calcium release-activated calcium modulator 3 TAS RGD PMID:22914293 RGD:7204692 NCBI chr16:30,949,068...30,954,938
Ensembl chr16:30,949,068...30,956,461
JBrowse link
G PVALB parvalbumin TAS RGD PMID:20943758 RGD:7204685 NCBI chr22:36,800,703...36,819,499
Ensembl chr22:36,800,684...36,819,479
JBrowse link
G RCVRN recoverin TAS RGD PMID:20668007 RGD:7204681 NCBI chr17:9,896,320...9,905,271
Ensembl chr17:9,896,320...9,905,271
JBrowse link
G RYR1 ryanodine receptor 1 TAS RGD PMID:20961976 RGD:7204694 NCBI chr19:38,433,691...38,587,564
Ensembl chr19:38,433,691...38,595,273
JBrowse link
G RYR2 ryanodine receptor 2 TAS RGD PMID:20961976 RGD:7204694 NCBI chr 1:237,042,184...237,833,988
Ensembl chr 1:237,042,184...237,833,988
JBrowse link
G RYR3 ryanodine receptor 3 TAS RGD PMID:20961976 RGD:7204694 NCBI chr15:33,310,967...33,866,102
Ensembl chr15:33,310,962...33,866,121
JBrowse link
G S100A1 S100 calcium binding protein A1 IMP
ISO
TAS
RGD PMID:16129693 PMID:17964289 PMID:17964289 RGD:1579960, RGD:7204682, RGD:7204682 NCBI chr 1:153,628,434...153,632,039
Ensembl chr 1:153,627,926...153,632,039
JBrowse link
G S100A4 S100 calcium binding protein A4 TAS
ISO
RGD PMID:17964289 PMID:17964289 RGD:7204682, RGD:7204682 NCBI chr 1:153,543,621...153,545,806
Ensembl chr 1:153,543,613...153,550,136
JBrowse link
G S100B S100 calcium binding protein B TAS
ISO
RGD PMID:17964289 PMID:17964289 RGD:7204682, RGD:7204682 NCBI chr21:46,598,604...46,605,082
Ensembl chr21:46,598,604...46,605,208
JBrowse link
G S100G S100 calcium binding protein G TAS RGD PMID:20943758 RGD:7204685 NCBI chr  X:16,650,158...16,654,670
Ensembl chr  X:16,650,158...16,654,670
JBrowse link
G SLC24A1 solute carrier family 24 member 1 TAS RGD PMID:17716241 RGD:7204698 NCBI chr15:65,611,350...65,661,002
Ensembl chr15:65,611,366...65,660,995
JBrowse link
G SLC24A2 solute carrier family 24 member 2 TAS RGD PMID:17716241 RGD:7204698 NCBI chr 9:19,507,455...20,307,892
Ensembl chr 9:19,507,452...19,789,037
JBrowse link
G SLC24A3 solute carrier family 24 member 3 TAS RGD PMID:17716241 RGD:7204698 NCBI chr20:19,212,642...19,722,926
Ensembl chr20:19,212,642...19,722,926
JBrowse link
G SLC24A4 solute carrier family 24 member 4 TAS RGD PMID:17716241 RGD:7204698 NCBI chr14:92,322,581...92,501,481
Ensembl chr14:92,322,581...92,501,481
JBrowse link
G SLC24A5 solute carrier family 24 member 5 TAS RGD PMID:17716241 RGD:7204698 NCBI chr15:48,120,990...48,142,672
Ensembl chr15:48,120,990...48,142,672
JBrowse link
G SLC8A1 solute carrier family 8 member A1 TAS RGD PMID:17716241 RGD:7204698 NCBI chr 2:40,097,270...40,512,435
Ensembl chr 2:40,097,270...40,611,053
JBrowse link
G SLC8A2 solute carrier family 8 member A2 TAS RGD PMID:17716241 RGD:7204698 NCBI chr19:47,428,017...47,471,893
Ensembl chr19:47,428,017...47,471,893
JBrowse link
G SLC8A3 solute carrier family 8 member A3 TAS RGD PMID:17716241 RGD:7204698 NCBI chr14:70,044,215...70,189,405
Ensembl chr14:70,044,215...70,189,480
JBrowse link
G SLC8B1 solute carrier family 8 member B1 TAS RGD PMID:22850819 RGD:7204696 NCBI chr12:113,298,771...113,335,109
Ensembl chr12:113,298,759...113,359,493
JBrowse link
G STIM1 stromal interaction molecule 1 TAS RGD PMID:22914293 RGD:7204692 NCBI chr11:3,854,604...4,093,210
Ensembl chr11:3,854,527...4,093,210
JBrowse link
G STIM2 stromal interaction molecule 2 TAS RGD PMID:22914293 RGD:7204692 NCBI chr 4:26,860,841...27,025,381
Ensembl chr 4:26,857,601...27,025,381
JBrowse link
G SYT1 synaptotagmin 1 TAS
ISO
RGD PMID:15534041 PMID:11751925 RGD:7204679, RGD:2311146 NCBI chr12:78,863,982...79,452,008
Ensembl chr12:78,863,993...79,452,008
JBrowse link
G SYT7 synaptotagmin 7 TAS RGD PMID:15534041 PMID:18713958 RGD:7204679, RGD:2311148 NCBI chr11:61,513,714...61,588,387
Ensembl chr11:61,513,714...61,581,148
JBrowse link
G SYT9 synaptotagmin 9 TAS
ISO
RGD PMID:18713958 PMID:11751925 RGD:2311148, RGD:2311146 NCBI chr11:7,238,778...7,469,043
Ensembl chr11:7,238,778...7,469,043
JBrowse link
G TNNC1 troponin C1, slow skeletal and cardiac type TAS RGD PMID:17964289 RGD:7204682 NCBI chr 3:52,451,100...52,454,041
Ensembl chr 3:52,451,100...52,454,041
JBrowse link
G TNNC2 troponin C2, fast skeletal type TAS
ISO
RGD PMID:17964289 PMID:17964289 RGD:7204682, RGD:7204682 NCBI chr20:45,823,214...45,833,306
Ensembl chr20:45,823,214...45,833,745
JBrowse link
G TPCN1 two pore segment channel 1 TAS RGD PMID:20018950 RGD:7204697 NCBI chr12:113,221,464...113,298,585
Ensembl chr12:113,221,050...113,298,585
JBrowse link
G TPCN2 two pore segment channel 2 TAS RGD PMID:20018950 RGD:7204697 NCBI chr11:69,048,932...69,090,597
Ensembl chr11:69,048,932...69,136,316
JBrowse link
G TRPV5 transient receptor potential cation channel subfamily V member 5 TAS RGD PMID:20716668 RGD:7204689 NCBI chr 7:142,908,101...142,933,746
Ensembl chr 7:142,908,101...142,933,746
JBrowse link
G TRPV6 transient receptor potential cation channel subfamily V member 6 TAS RGD PMID:20716668 RGD:7204689 NCBI chr 7:142,871,208...142,885,745
Ensembl chr 7:142,871,208...142,885,745
JBrowse link
calcium/calmodulin dependent kinase 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1C calcium voltage-gated channel subunit alpha1 C TAS RGD PMID:23091085 RGD:7240708 NCBI chr12:1,970,780...2,697,950
Ensembl chr12:1,970,772...2,697,950
JBrowse link
G CACNB2 calcium voltage-gated channel auxiliary subunit beta 2 TAS RGD PMID:23091085 RGD:7240708 NCBI chr10:18,140,424...18,543,557
Ensembl chr10:18,140,424...18,543,557
JBrowse link
G CACNG2 calcium voltage-gated channel auxiliary subunit gamma 2 TAS RGD PMID:22334212 RGD:7240704 NCBI chr22:36,560,857...36,703,752
Ensembl chr22:36,560,857...36,703,752
JBrowse link
G CALM1 calmodulin 1 TAS RGD PMID:22717267 PMID:23091085 RGD:7240705, RGD:7240708 NCBI chr14:90,396,502...90,408,268
Ensembl chr14:90,396,502...90,408,268
JBrowse link
G CALM2 calmodulin 2 TAS RGD PMID:22717267 PMID:23091085 RGD:7240705, RGD:7240708 NCBI chr 2:47,160,082...47,176,936
Ensembl chr 2:47,160,084...47,176,921
JBrowse link
G CALM3 calmodulin 3 TAS RGD PMID:22717267 PMID:23091085 RGD:7240705, RGD:7240708 NCBI chr19:46,601,074...46,610,782
Ensembl chr19:46,601,074...46,610,782
JBrowse link
G CAMK2A calcium/calmodulin dependent protein kinase II alpha TAS RGD PMID:22334212 PMID:22717267 RGD:7240704, RGD:7240705 NCBI chr 5:150,219,491...150,290,130
Ensembl chr 5:150,219,491...150,290,093
JBrowse link
G CAMK2B calcium/calmodulin dependent protein kinase II beta TAS RGD PMID:22334212 PMID:22717267 RGD:7240704, RGD:7240705 NCBI chr 7:44,217,154...44,326,013
Ensembl chr 7:44,210,019...44,334,577
JBrowse link
G CAMK2D calcium/calmodulin dependent protein kinase II delta TAS RGD PMID:22717267 PMID:23091085 RGD:7240705, RGD:7240708 NCBI chr 4:113,451,032...113,761,738
Ensembl chr 4:113,418,054...113,761,927
JBrowse link
G CAMK2G calcium/calmodulin dependent protein kinase II gamma TAS RGD PMID:22717267 RGD:7240705 NCBI chr10:73,812,501...73,874,555
Ensembl chr10:73,812,501...73,874,591
JBrowse link
G CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 TAS RGD PMID:21070840 PMID:21301225 RGD:7240706, RGD:7240707 NCBI chr 1:20,482,391...20,486,210
Ensembl chr 1:20,482,391...20,486,210
JBrowse link
G CAMK2N2 calcium/calmodulin dependent protein kinase II inhibitor 2 TAS RGD PMID:21070840 PMID:21301225 RGD:7240706, RGD:7240707 NCBI chr 3:184,259,213...184,261,553
Ensembl chr 3:184,259,213...184,261,553
JBrowse link
G DLG1 discs large MAGUK scaffold protein 1 TAS RGD PMID:22717267 RGD:7240705 NCBI chr 3:197,042,560...197,299,321
Ensembl chr 3:197,042,560...197,299,330
JBrowse link
G GRIA1 glutamate ionotropic receptor AMPA type subunit 1 TAS RGD PMID:22334212 RGD:7240704 NCBI chr 5:153,489,615...153,813,869
Ensembl chr 5:153,489,615...153,813,869
JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 TAS RGD PMID:22717267 RGD:7240705 NCBI chr 9:137,139,154...137,168,756
Ensembl chr 9:137,138,346...137,168,756
JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A TAS RGD PMID:22717267 RGD:7240705 NCBI chr16:9,753,404...10,182,908
Ensembl chr16:9,753,404...10,182,928
JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B TAS RGD PMID:22334212 PMID:22717267 RGD:7240704, RGD:7240705 NCBI chr12:13,537,337...13,982,134
Ensembl chr12:13,437,942...13,982,002
JBrowse link
G HDAC4 histone deacetylase 4 TAS RGD PMID:21255680 RGD:7241019 NCBI chr 2:239,048,168...239,401,649
Ensembl chr 2:239,048,168...239,401,654
JBrowse link
G HDAC5 histone deacetylase 5 TAS RGD PMID:21255680 RGD:7241019 NCBI chr17:44,076,753...44,123,641
Ensembl chr17:44,076,746...44,123,702
JBrowse link
G LRRC7 leucine rich repeat containing 7 TAS RGD PMID:22717267 RGD:7240705 NCBI chr 1:69,567,922...70,144,364
Ensembl chr 1:69,567,922...70,151,945
JBrowse link
G PLN phospholamban TAS RGD PMID:23091085 RGD:7240708 NCBI chr 6:118,548,296...118,561,716
Ensembl chr 6:118,548,296...118,561,716
JBrowse link
G PPM1E protein phosphatase, Mg2+/Mn2+ dependent 1E TAS RGD PMID:18454172 RGD:7241020 NCBI chr17:58,755,854...58,985,179
Ensembl chr17:58,755,854...58,985,179
JBrowse link
G PPM1F protein phosphatase, Mg2+/Mn2+ dependent 1F TAS RGD PMID:18454172 RGD:7241020 NCBI chr22:21,919,425...21,952,848
Ensembl chr22:21,919,425...21,952,848
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma TAS RGD PMID:18454172 RGD:7241020 NCBI chr12:110,708,376...110,742,891
Ensembl chr12:110,719,680...110,742,939
JBrowse link
G PPP2CA protein phosphatase 2 catalytic subunit alpha TAS RGD PMID:18454172 RGD:7241020 NCBI chr 5:134,194,332...134,226,073
Ensembl chr 5:134,194,035...134,226,073
JBrowse link
G RYR2 ryanodine receptor 2 TAS RGD PMID:23091085 RGD:7240708 NCBI chr 1:237,042,184...237,833,988
Ensembl chr 1:237,042,184...237,833,988
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 TAS RGD PMID:23091085 RGD:7240708 NCBI chr 3:38,548,062...38,649,687
Ensembl chr 3:38,548,057...38,649,687
JBrowse link
G SYNGAP1 synaptic Ras GTPase activating protein 1 TAS RGD PMID:22717267 RGD:7240705 NCBI chr 6:33,418,167...33,453,689
Ensembl chr 6:33,419,661...33,453,689
JBrowse link
calcium/calmodulin dependent kinase signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EDNRB endothelin receptor type B ISO RGD PMID:15245872 RGD:1581866 NCBI chr13:77,895,481...77,975,527
Ensembl chr13:77,895,481...77,975,529
JBrowse link
carrier pathway of mitochondrial protein import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TIMM10 translocase of inner mitochondrial membrane 10 IDA RGD PMID:14726512 RGD:10412667 NCBI chr11:57,528,464...57,530,754
Ensembl chr11:57,528,464...57,530,803
JBrowse link
G TIMM10B translocase of inner mitochondrial membrane 10B IDA RGD PMID:14726512 RGD:10412667 NCBI chr11:6,481,501...6,484,681
Ensembl chr11:6,481,501...6,484,681
JBrowse link
G TIMM22 translocase of inner mitochondrial membrane 22 TAS RGD PMID:14726512 RGD:10412667 NCBI chr17:997,129...1,003,671
Ensembl chr17:997,129...1,003,671
JBrowse link
G TIMM9 translocase of inner mitochondrial membrane 9 IDA RGD PMID:14726512 RGD:10412667 NCBI chr14:58,408,494...58,427,531
Ensembl chr14:58,408,495...58,427,531
JBrowse link
G TOMM20 translocase of outer mitochondrial membrane 20 TAS RGD PMID:25980382 RGD:10412661 NCBI chr 1:235,109,341...235,128,837
Ensembl chr 1:235,109,341...235,128,837
JBrowse link
G TOMM22 translocase of outer mitochondrial membrane 22 TAS RGD PMID:25980382 RGD:10412661 NCBI chr22:38,681,957...38,685,421
Ensembl chr22:38,681,957...38,685,421
JBrowse link
G TOMM40 translocase of outer mitochondrial membrane 40 TAS RGD PMID:25980382 RGD:10412661 NCBI chr19:44,891,254...44,903,689
Ensembl chr19:44,890,569...44,903,689
JBrowse link
G TOMM5 translocase of outer mitochondrial membrane 5 TAS RGD PMID:25980382 RGD:10412661 NCBI chr 9:37,588,413...37,592,597
Ensembl chr 9:37,582,646...37,592,604
JBrowse link
G TOMM6 translocase of outer mitochondrial membrane 6 TAS RGD PMID:25980382 RGD:10412661 NCBI chr 6:41,787,694...41,789,895
Ensembl chr 6:41,787,662...41,789,898
JBrowse link
G TOMM7 translocase of outer mitochondrial membrane 7 TAS RGD PMID:25980382 RGD:10412661 NCBI chr 7:22,812,974...22,822,849
Ensembl chr 7:22,812,628...22,822,849
JBrowse link
G TOMM70 translocase of outer mitochondrial membrane 70 TAS RGD PMID:25980382 RGD:10412661 NCBI chr 3:100,363,431...100,401,089
Ensembl chr 3:100,363,431...100,401,089
JBrowse link
citric acid cycle pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACLY ATP citrate lyase IEA KEGG hsa:00020 NCBI chr17:41,866,917...41,930,545
Ensembl chr17:41,866,917...41,930,542
JBrowse link
G ACO1 aconitase 1 IEA KEGG hsa:00020 NCBI chr 9:32,384,643...32,454,769
Ensembl chr 9:32,384,603...32,454,769
JBrowse link
G ACO2 aconitase 2 IEA
EXP
ISO
KEGG
SMPDB
RGD
PMID:9712727 SMP:00057 hsa:00020, RGD:2306877 NCBI chr22:41,469,117...41,528,974
Ensembl chr22:41,447,830...41,529,273
JBrowse link
G CS citrate synthase ISO
EXP
IEA
SMPDB
KEGG
RGD
PMID:9712727 PMID:938457 SMP:00057 hsa:00020, RGD:2306877, RGD:2306828 NCBI chr12:56,271,699...56,300,330
Ensembl chr12:56,271,699...56,300,391
JBrowse link
G DLAT dihydrolipoamide S-acetyltransferase IEA
EXP
KEGG
SMPDB
SMP:00057 hsa:00020 NCBI chr11:112,025,408...112,064,404
Ensembl chr11:112,025,408...112,064,404
JBrowse link
G DLD dihydrolipoamide dehydrogenase TAS
EXP
IEA
SMPDB
KEGG
RGD
PMID:10672230 SMP:00057 hsa:00020, RGD:2306878 NCBI chr 7:107,891,107...107,921,198
Ensembl chr 7:107,891,162...107,931,730
JBrowse link
G DLST dihydrolipoamide S-succinyltransferase TAS
EXP
IEA
SMPDB
KEGG
RGD
PMID:10672230 SMP:00057 hsa:00020, RGD:2306878 NCBI chr14:74,881,916...74,903,743
Ensembl chr14:74,881,891...74,903,743
JBrowse link
G FH fumarate hydratase ISO
EXP
IEA
SMPDB
KEGG
RGD
PMID:938457 SMP:00057 hsa:00020, RGD:2306828 NCBI chr 1:241,497,603...241,519,755
Ensembl chr 1:241,497,511...241,519,799
JBrowse link
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 IEA KEGG hsa:00020 NCBI chr 2:208,236,227...208,255,071
Ensembl chr 2:208,236,229...208,266,074
JBrowse link
G IDH2 isocitrate dehydrogenase (NADP(+)) 2 IEA KEGG hsa:00020 NCBI chr15:90,083,045...90,102,468
Ensembl chr15:90,083,045...90,102,477
JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ISO
EXP
IEA
SMPDB
KEGG
RGD
PMID:938457 SMP:00057 hsa:00020, RGD:2306828 NCBI chr15:78,149,362...78,171,945
Ensembl chr15:78,131,498...78,171,945
JBrowse link
G IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta ISO
EXP
IEA
SMPDB
KEGG
RGD
PMID:938457 SMP:00057 hsa:00020, RGD:2306828 NCBI chr20:2,658,395...2,664,216
Ensembl chr20:2,658,395...2,664,219
JBrowse link
G IDH3G isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ISO
EXP
IEA
SMPDB
KEGG
RGD
PMID:938457 SMP:00057 hsa:00020, RGD:2306828 NCBI chr  X:153,785,768...153,794,375
Ensembl chr  X:153,785,766...153,794,512
JBrowse link
G MDH1 malate dehydrogenase 1 IEA KEGG hsa:00020 NCBI chr 2:63,588,963...63,607,197
Ensembl chr 2:63,588,609...63,607,197
JBrowse link
G MDH2 malate dehydrogenase 2 IEA
EXP
ISO
KEGG
SMPDB
RGD
PMID:938457 SMP:00057 hsa:00020, RGD:2306828 NCBI chr 7:76,048,106...76,067,508
Ensembl chr 7:76,048,051...76,067,508
JBrowse link
G MPC1 mitochondrial pyruvate carrier 1 EXP SMPDB SMP:00057 NCBI chr 6:166,364,919...166,382,940
Ensembl chr 6:166,364,919...166,383,013
JBrowse link
G OGDH oxoglutarate dehydrogenase ISO
EXP
IEA
TAS
SMPDB
KEGG
RGD
PMID:9712727 PMID:10672230 SMP:00057 hsa:00020, RGD:2306877, RGD:2306878 NCBI chr 7:44,606,627...44,709,066
Ensembl chr 7:44,606,572...44,709,066
JBrowse link
G OGDHL oxoglutarate dehydrogenase L IEA KEGG hsa:00020 NCBI chr10:49,734,641...49,762,379
Ensembl chr10:49,734,641...49,762,379
JBrowse link
G PC pyruvate carboxylase IEA
EXP
KEGG
SMPDB
SMP:00057 hsa:00020 NCBI chr11:66,848,420...66,958,383
Ensembl chr11:66,848,417...66,958,386
JBrowse link
G PCK1 phosphoenolpyruvate carboxykinase 1 IEA KEGG hsa:00020 NCBI chr20:57,561,110...57,568,121
Ensembl chr20:57,561,080...57,568,121
JBrowse link
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial IEA KEGG hsa:00020 NCBI chr14:24,094,171...24,104,125
Ensembl chr14:24,094,053...24,110,598
JBrowse link
G PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 IEA
EXP
KEGG
SMPDB
SMP:00057 hsa:00020 NCBI chr  X:19,343,927...19,361,718
Ensembl chr  X:19,343,893...19,361,718
JBrowse link
G PDHA2 pyruvate dehydrogenase E1 subunit alpha 2 IEA KEGG hsa:00020 NCBI chr 4:95,840,093...95,841,464
Ensembl chr 4:95,840,093...95,841,464
JBrowse link
G PDHB pyruvate dehydrogenase E1 subunit beta IEA
EXP
KEGG
SMPDB
SMP:00057 hsa:00020 NCBI chr 3:58,427,630...58,433,832
Ensembl chr 3:58,427,630...58,433,857
JBrowse link
G SDHA succinate dehydrogenase complex flavoprotein subunit A TAS
EXP
IEA
SMPDB
KEGG
RGD
PMID:16143825 SMP:00057 hsa:00020, RGD:2306881 NCBI chr 5:218,320...268,746
Ensembl chr 5:218,303...257,082
JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B TAS
EXP
IEA
SMPDB
KEGG
RGD
PMID:16143825 SMP:00057 hsa:00020, RGD:2306881 NCBI chr 1:17,018,722...17,054,032
Ensembl chr 1:17,018,722...17,054,032
JBrowse link
G SDHC succinate dehydrogenase complex subunit C TAS
EXP
IEA
SMPDB
KEGG
RGD
PMID:16143825 SMP:00057 hsa:00020, RGD:2306881 NCBI chr 1:161,314,381...161,363,206
Ensembl chr 1:161,314,381...161,363,206
JBrowse link
G SDHD succinate dehydrogenase complex subunit D TAS
EXP
IEA
SMPDB
KEGG
RGD
PMID:16143825 SMP:00057 hsa:00020, RGD:2306881 NCBI chr11:112,086,873...112,095,794
Ensembl chr11:112,086,824...112,120,016
JBrowse link
G SUCLA2 succinate-CoA ligase ADP-forming subunit beta ISO
IEA
KEGG
RGD
PMID:17403370 hsa:00020, RGD:2306915 NCBI chr13:47,942,656...48,001,273
Ensembl chr13:47,745,736...48,037,968
JBrowse link
G SUCLG1 succinate-CoA ligase GDP/ADP-forming subunit alpha ISO
EXP
IEA
SMPDB
KEGG
RGD
PMID:17403370 SMP:00057 hsa:00020, RGD:2306915 NCBI chr 2:84,423,528...84,459,280
Ensembl chr 2:84,423,528...84,460,045
JBrowse link
G SUCLG2 succinate-CoA ligase GDP-forming subunit beta ISO
EXP
IEA
SMPDB
KEGG
RGD
PMID:17403370 SMP:00057 hsa:00020, RGD:2306915 NCBI chr 3:67,360,460...67,654,612
Ensembl chr 3:67,360,460...67,654,612
JBrowse link
coagulation cascade pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A2M alpha-2-macroglobulin IEA KEGG hsa:04610 NCBI chr12:9,067,708...9,116,229
Ensembl chr12:9,067,664...9,116,229
JBrowse link
G APOH apolipoprotein H TAS RGD PMID:15507263 RGD:1578489 NCBI chr17:66,212,033...66,229,415
Ensembl chr17:66,212,033...66,256,525
JBrowse link
G BDKRB1 bradykinin receptor B1 IEA KEGG hsa:04610 NCBI chr14:96,256,210...96,264,763
Ensembl chr14:96,256,210...96,268,967
JBrowse link
G BDKRB2 bradykinin receptor B2 IEA KEGG hsa:04610 NCBI chr14:96,204,839...96,244,164
Ensembl chr14:96,204,679...96,244,166
JBrowse link
G C1QA complement C1q A chain IEA KEGG hsa:04610 NCBI chr 1:22,636,463...22,639,678
Ensembl chr 1:22,635,077...22,639,678
JBrowse link
G C1QB complement C1q B chain IEA KEGG hsa:04610 NCBI chr 1:22,653,236...22,661,637
Ensembl chr 1:22,652,762...22,661,637
JBrowse link
G C1QC complement C1q C chain IEA KEGG hsa:04610 NCBI chr 1:22,643,633...22,648,108
Ensembl chr 1:22,643,014...22,648,110
JBrowse link
G C1R complement C1r IEA KEGG hsa:04610 NCBI chr12:7,080,219...7,092,445
Ensembl chr12:7,080,214...7,092,540
JBrowse link
G C1S complement C1s IEA KEGG hsa:04610 NCBI chr12:7,060,718...7,071,032
Ensembl chr12:6,988,259...7,071,032
JBrowse link
G C2 complement C2 IEA KEGG hsa:04610 NCBI chr 6:31,897,783...31,945,672
Ensembl chr 6:31,897,785...31,945,673
JBrowse link
G C3 complement C3 IEA KEGG hsa:04610 NCBI chr19:6,677,704...6,720,650
Ensembl chr19:6,677,704...6,730,562
JBrowse link
G C3AR1 complement C3a receptor 1 IEA KEGG hsa:04610 NCBI chr12:8,056,844...8,066,359
Ensembl chr12:8,056,844...8,066,359
JBrowse link
G C4A complement C4A (Rodgers blood group) IEA KEGG hsa:04610 NCBI chr 6:31,982,057...32,002,681
Ensembl chr 6:31,982,057...32,002,681
JBrowse link
G C4B complement C4B (Chido blood group) IEA KEGG hsa:04610 NCBI chr 6:32,014,795...32,035,418
Ensembl chr 6:32,014,795...32,035,418
JBrowse link
G C4BPA complement component 4 binding protein alpha IEA KEGG hsa:04610 NCBI chr 1:207,104,233...207,144,972
Ensembl chr 1:207,104,233...207,144,972
JBrowse link
G C4BPB complement component 4 binding protein beta IEA KEGG hsa:04610 NCBI chr 1:207,088,860...207,099,993
Ensembl chr 1:207,088,860...207,099,993
JBrowse link
G C5 complement C5 IEA KEGG hsa:04610 NCBI chr 9:120,952,335...121,074,865
Ensembl chr 9:120,932,987...121,075,195
JBrowse link
G C5AR1 complement C5a receptor 1 IEA KEGG hsa:04610 NCBI chr19:47,307,477...47,322,066
Ensembl chr19:47,290,023...47,322,066
JBrowse link
G C6 complement C6 IEA KEGG hsa:04610 NCBI chr 5:41,142,116...41,261,469
Ensembl chr 5:41,142,116...41,261,438
JBrowse link
G C7 complement C7 IEA KEGG hsa:04610 NCBI chr 5:40,909,497...40,984,643
Ensembl chr 5:40,909,492...41,020,216
JBrowse link
G C8A complement C8 alpha chain IEA KEGG hsa:04610 NCBI chr 1:56,854,797...56,918,223
Ensembl chr 1:56,854,768...56,918,223
JBrowse link
G C8B complement C8 beta chain IEA KEGG hsa:04610 NCBI chr 1:56,929,207...56,966,015
Ensembl chr 1:56,929,207...56,974,383
JBrowse link
G C8G complement C8 gamma chain IEA KEGG hsa:04610 NCBI chr 9:136,945,243...136,946,975
Ensembl chr 9:136,945,185...136,946,975
JBrowse link
G C9 complement C9 IEA KEGG hsa:04610 NCBI chr 5:39,284,140...39,364,495
Ensembl chr 5:39,284,140...39,371,324
JBrowse link
G CD46 CD46 molecule IEA KEGG hsa:04610 NCBI chr 1:207,752,038...207,795,516
Ensembl chr 1:207,752,037...207,795,513
JBrowse link
G CD55 CD55 molecule (Cromer blood group) IEA KEGG hsa:04610 NCBI chr 1:207,321,678...207,360,966
Ensembl chr 1:207,321,519...207,386,804
JBrowse link
G CD59 CD59 molecule (CD59 blood group) IEA KEGG hsa:04610 NCBI chr11:33,703,010...33,736,479
Ensembl chr11:33,703,010...33,736,479
JBrowse link
G CFB complement factor B IEA KEGG hsa:04610 NCBI chr 6:31,946,095...31,952,084
Ensembl chr 6:31,945,650...31,952,086
JBrowse link
G CFD complement factor D IEA KEGG hsa:04610 NCBI chr19:859,664...863,641
Ensembl chr19:859,453...867,884
JBrowse link
G CFH complement factor H IEA KEGG hsa:04610 NCBI chr 1:196,652,043...196,747,504
Ensembl chr 1:196,651,754...196,752,476
JBrowse link
G CFI complement factor I IEA KEGG hsa:04610 NCBI chr 4:109,730,982...109,801,999
Ensembl chr 4:109,731,008...109,802,150
JBrowse link
G CPB2 carboxypeptidase B2 IEA KEGG hsa:04610 NCBI chr13:46,053,186...46,105,033
Ensembl chr13:46,053,186...46,105,033
JBrowse link
G CR1 complement C3b/C4b receptor 1 (Knops blood group) IEA KEGG hsa:04610 NCBI chr 1:207,496,157...207,641,765
Ensembl chr 1:207,496,147...207,641,765
JBrowse link
G CR2 complement C3d receptor 2 IEA KEGG hsa:04610 NCBI chr 1:207,454,328...207,489,892
Ensembl chr 1:207,453,024...207,489,895
JBrowse link
G F10 coagulation factor X TAS
IEA
ISO
KEGG
RGD
PMID:12356487 PMID:12787532 PMID:26018600 PMID:10048754 hsa:04610, RGD:1580376, RGD:11352277, RGD:11342779, RGD:2290183 NCBI chr13:113,122,799...113,149,529
Ensembl chr13:113,122,799...113,149,529
JBrowse link
G F11 coagulation factor XI ISO
TAS
IEA
KEGG
RGD
PMID:10048754 PMID:12787532 PMID:26018600 hsa:04610, RGD:2290183, RGD:11352277, RGD:11342779 NCBI chr 4:186,266,189...186,289,681
Ensembl chr 4:186,266,189...186,289,681
JBrowse link
G F12 coagulation factor XII ISO
TAS
IEA
KEGG
RGD
PMID:10048754 PMID:12787532 PMID:26018600 hsa:04610, RGD:2290183, RGD:11352277, RGD:11342779 NCBI chr 5:177,402,141...177,409,564
Ensembl chr 5:177,402,133...177,416,583
JBrowse link
G F13A1 coagulation factor XIII A chain IEA
TAS
KEGG
RGD
PMID:16102057 hsa:04610, RGD:11352259 NCBI chr 6:6,144,084...6,320,662
Ensembl chr 6:6,144,084...6,321,013
JBrowse link
G F13B coagulation factor XIII B chain IEA
TAS
KEGG
RGD
PMID:16102057 hsa:04610, RGD:11352259 NCBI chr 1:197,038,741...197,067,260
Ensembl chr 1:197,038,741...197,067,260
JBrowse link
G F2 coagulation factor II, thrombin ISS
TAS
IEA
ISO
KEGG
RGD
PMID:15975137 PMID:12787532 PMID:26018600 PMID:10048754 hsa:04610, RGD:1578509, RGD:11352277, RGD:11342779, RGD:2290183 NCBI chr11:46,719,213...46,739,506
Ensembl chr11:46,719,196...46,739,506
JBrowse link
G F2R coagulation factor II thrombin receptor IEA KEGG hsa:04610 NCBI chr 5:76,716,126...76,735,770
Ensembl chr 5:76,716,126...76,735,770
JBrowse link
G F3 coagulation factor III, tissue factor IEA
TAS
KEGG
RGD
PMID:12787532 PMID:26018600 hsa:04610, RGD:11352277, RGD:11342779 NCBI chr 1:94,529,173...94,541,759
Ensembl chr 1:94,529,173...94,541,759
JBrowse link
G F5 coagulation factor V TAS
IEA
ISO
KEGG
RGD
PMID:15147718 PMID:12787532 PMID:26018600 PMID:10048754 hsa:04610, RGD:1580372, RGD:11352277, RGD:11342779, RGD:2290183 NCBI chr 1:169,511,951...169,586,481
Ensembl chr 1:169,511,951...169,586,588
JBrowse link
G F7 coagulation factor VII TAS
IEA
ISO
KEGG
RGD
PMID:12356487 PMID:12787532 PMID:26018600 PMID:10048754 hsa:04610, RGD:1580376, RGD:11352277, RGD:11342779, RGD:2290183 NCBI chr13:113,105,788...113,120,685
Ensembl chr13:113,105,788...113,120,685
JBrowse link
G F8 coagulation factor VIII IDA
TAS
IEA
ISO
KEGG
RGD
PMID:7721754 PMID:12787532 PMID:26018600 PMID:10048754 hsa:04610, RGD:1582371, RGD:11352277, RGD:11342779, RGD:2290183 NCBI chr  X:154,835,792...155,022,723
Ensembl chr  X:154,835,788...155,026,940
JBrowse link
G F9 coagulation factor IX TAS
IEA
ISO
KEGG
RGD
PMID:12356487 PMID:12787532 PMID:26018600 PMID:10048754 hsa:04610, RGD:1580376, RGD:11352277, RGD:11342779, RGD:2290183 NCBI chr  X:139,530,739...139,563,459
Ensembl chr  X:139,530,739...139,563,459
JBrowse link
G FGA fibrinogen alpha chain IEA
TAS
KEGG
RGD
PMID:16102057 hsa:04610, RGD:11352259 NCBI chr 4:154,583,126...154,590,742
Ensembl chr 4:154,583,126...154,590,742
JBrowse link
G FGB fibrinogen beta chain IEA
TAS
KEGG
RGD
PMID:16102057 hsa:04610, RGD:11352259 NCBI chr 4:154,562,980...154,572,807
Ensembl chr 4:154,563,011...154,572,807
JBrowse link
G FGG fibrinogen gamma chain IEA
TAS
KEGG
RGD
PMID:16102057 hsa:04610, RGD:11352259 NCBI chr 4:154,604,136...154,612,656
Ensembl chr 4:154,604,134...154,612,967
JBrowse link
G KLKB1 kallikrein B1 IEA KEGG hsa:04610 NCBI chr 4:186,210,853...186,258,471
Ensembl chr 4:186,226,438...186,258,471
JBrowse link
G KNG1 kininogen 1 IEA KEGG hsa:04610 NCBI chr 3:186,717,359...186,744,410
Ensembl chr 3:186,717,348...186,744,410
JBrowse link
G MASP1 MBL associated serine protease 1 IEA KEGG hsa:04610 NCBI chr 3:187,217,282...187,291,737
Ensembl chr 3:187,217,282...187,291,980
JBrowse link
G MASP2 MBL associated serine protease 2 IEA KEGG hsa:04610 NCBI chr 1:11,026,523...11,047,239
Ensembl chr 1:11,022,009...11,047,239
JBrowse link
G MBL2 mannose binding lectin 2 IEA KEGG hsa:04610 NCBI chr10:52,765,380...52,772,784
Ensembl chr10:52,765,380...52,772,784
JBrowse link
G PLAT plasminogen activator, tissue type IEA KEGG hsa:04610 NCBI chr 8:42,174,718...42,207,565
Ensembl chr 8:42,174,718...42,207,709
JBrowse link
G PLAU plasminogen activator, urokinase IEA KEGG hsa:04610 NCBI chr10:73,909,164...73,917,494
Ensembl chr10:73,909,177...73,917,496
JBrowse link
G PLAUR plasminogen activator, urokinase receptor IEA KEGG hsa:04610 NCBI chr19:43,646,095...43,670,169
Ensembl chr19:43,646,095...43,670,547
JBrowse link
G PLG plasminogen IEA KEGG hsa:04610 NCBI chr 6:160,702,193...160,754,097
Ensembl chr 6:160,702,194...160,754,097
JBrowse link
G PROC protein C, inactivator of coagulation factors Va and VIIIa IEA
TAS
KEGG
RGD
PMID:12787532 hsa:04610, RGD:11352277 NCBI chr 2:127,418,427...127,429,242
Ensembl chr 2:127,418,427...127,429,242
JBrowse link
G PROS1 protein S IEA KEGG hsa:04610 NCBI chr 3:93,873,051...93,973,896
Ensembl chr 3:93,873,051...93,980,003
JBrowse link
G PROZ protein Z, vitamin K dependent plasma glycoprotein TAS RGD PMID:23690629 RGD:11352284 NCBI chr13:113,158,648...113,172,386
Ensembl chr13:113,158,648...113,172,386
JBrowse link
G SERPINA1 serpin family A member 1 IEA KEGG hsa:04610 NCBI chr14:94,376,747...94,390,635
Ensembl chr14:94,376,747...94,390,693
JBrowse link
G SERPINA10 serpin family A member 10 TAS RGD PMID:23690629 RGD:11352284 NCBI chr14:94,280,460...94,293,268
Ensembl chr14:94,280,460...94,293,268
JBrowse link
G SERPINA5 serpin family A member 5 IEA KEGG hsa:04610 NCBI chr14:94,581,426...94,593,118
Ensembl chr14:94,561,442...94,593,118
JBrowse link
G SERPINC1 serpin family C member 1 IEA
TAS
KEGG
RGD
PMID:12787532 hsa:04610, RGD:11352277 NCBI chr 1:173,903,800...173,917,327
Ensembl chr 1:173,903,800...173,917,327
JBrowse link
G SERPIND1 serpin family D member 1 IEA KEGG hsa:04610 NCBI chr22:20,774,113...20,787,720
Ensembl chr22:20,774,113...20,787,720
JBrowse link
G SERPINE1 serpin family E member 1 IEA KEGG hsa:04610 NCBI chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247
JBrowse link
G SERPINF2 serpin family F member 2 IEA KEGG hsa:04610 NCBI chr17:1,742,871...1,755,265
Ensembl chr17:1,742,836...1,755,265
JBrowse link
G SERPING1 serpin family G member 1 IEA
TAS
KEGG
RGD
PMID:12787532 PMID:26018600 hsa:04610, RGD:11352277, RGD:11342779 NCBI chr11:57,597,685...57,614,848
Ensembl chr11:57,597,387...57,619,171
JBrowse link
G TFPI tissue factor pathway inhibitor IEA
TAS
KEGG
RGD
PMID:12787532 PMID:26018600 hsa:04610, RGD:11352277, RGD:11342779 NCBI chr 2:187,464,230...187,554,435
Ensembl chr 2:187,464,230...187,565,760
JBrowse link
G THBD thrombomodulin IEA KEGG hsa:04610 NCBI chr20:23,045,633...23,049,672
Ensembl chr20:23,045,633...23,049,672
JBrowse link
G VWF von Willebrand factor IEA KEGG hsa:04610 NCBI chr12:5,948,877...6,124,670
Ensembl chr12:5,948,877...6,124,770
JBrowse link
cytosolic iron-sulfur cluster protein assembly pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIAO1 cytosolic iron-sulfur assembly component 1 TAS RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr 2:96,266,225...96,274,173
Ensembl chr 2:96,266,159...96,274,173
JBrowse link
G CIAO2A cytosolic iron-sulfur assembly component 2A TAS RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr15:64,072,565...64,093,838
Ensembl chr15:64,072,565...64,093,857
JBrowse link
G CIAO2B cytosolic iron-sulfur assembly component 2B TAS RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr16:66,932,065...66,934,402
Ensembl chr16:66,932,065...66,934,423
JBrowse link
G CIAO3 cytosolic iron-sulfur assembly component 3 TAS RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr16:729,765...740,997
Ensembl chr16:729,760...741,329
JBrowse link
G CIAPIN1 cytokine induced apoptosis inhibitor 1 TAS RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr16:57,428,187...57,447,385
Ensembl chr16:57,428,187...57,447,420
JBrowse link
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component TAS RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr10:97,458,324...97,498,794
Ensembl chr10:97,458,324...97,498,794
JBrowse link
G NDOR1 NADPH dependent diflavin oxidoreductase 1 TAS RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr 9:137,205,700...137,219,361
Ensembl chr 9:137,205,685...137,219,361
JBrowse link
G NUBP1 NUBP iron-sulfur cluster assembly factor 1, cytosolic TAS RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr16:10,743,842...10,769,351
Ensembl chr16:10,743,786...10,769,351
JBrowse link
G NUBP2 NUBP iron-sulfur cluster assembly factor 2, cytosolic TAS RGD PMID:25245479 PMID:25583461 RGD:11554190, RGD:11554192 NCBI chr16:1,782,960...1,789,186
Ensembl chr16:1,782,932...1,789,186
JBrowse link
DNA modification pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXXC1 CXXC finger protein 1 TAS RGD PMID:23697932 RGD:9479164 NCBI chr18:50,282,347...50,287,692
Ensembl chr18:50,282,343...50,287,839
JBrowse link
G DNMT1 DNA methyltransferase 1 TAS RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr19:10,133,346...10,194,953
Ensembl chr19:10,133,342...10,231,286
JBrowse link
G DNMT3A DNA methyltransferase 3 alpha TAS RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 2:25,227,874...25,342,590
Ensembl chr 2:25,227,855...25,342,590
JBrowse link
G DNMT3B DNA methyltransferase 3 beta TAS RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr20:32,762,385...32,809,356
Ensembl chr20:32,762,385...32,809,359
JBrowse link
G EBF1 EBF transcription factor 1 TAS RGD PMID:24825349 RGD:8695944 NCBI chr 5:158,695,920...159,099,916
Ensembl chr 5:158,695,916...159,099,916
JBrowse link
G KDM2A lysine demethylase 2A TAS RGD PMID:23697932 RGD:9479164 NCBI chr11:67,119,263...67,258,082
Ensembl chr11:67,119,263...67,258,082
JBrowse link
G KDM2B lysine demethylase 2B TAS RGD PMID:23697932 RGD:9479164 NCBI chr12:121,408,461...121,582,279
Ensembl chr12:121,429,096...121,581,023
JBrowse link
G KMT2A lysine methyltransferase 2A TAS RGD PMID:23697932 RGD:9479164 NCBI chr11:118,436,492...118,526,832
Ensembl chr11:118,436,456...118,526,832
JBrowse link
G KMT2C lysine methyltransferase 2C TAS RGD PMID:23697932 RGD:9479164 NCBI chr 7:152,134,925...152,436,003
Ensembl chr 7:152,134,922...152,436,644
JBrowse link
G MBD1 methyl-CpG binding domain protein 1 TAS RGD PMID:23324617 RGD:8695954 NCBI chr18:50,266,885...50,281,767
Ensembl chr18:50,266,882...50,281,774
JBrowse link
G MBD2 methyl-CpG binding domain protein 2 TAS RGD PMID:23324617 RGD:8695954 NCBI chr18:54,151,606...54,224,669
Ensembl chr18:54,151,606...54,224,669
JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase TAS RGD PMID:23324617 RGD:8695954 NCBI chr 3:129,430,947...129,439,948
Ensembl chr 3:129,430,947...129,440,179
JBrowse link
G MECP2 methyl-CpG binding protein 2 TAS RGD PMID:23324617 RGD:8695954 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103
JBrowse link
G NANOG Nanog homeobox TAS RGD PMID:24825349 RGD:8695944 NCBI chr12:7,789,402...7,799,146
Ensembl chr12:7,787,794...7,799,146
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase TAS RGD PMID:24825349 RGD:8695944 NCBI chr  X:71,533,104...71,575,892
Ensembl chr  X:71,533,087...71,575,892
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma TAS RGD PMID:24825349 RGD:8695944 NCBI chr 3:12,287,368...12,434,344
Ensembl chr 3:12,287,368...12,434,356
JBrowse link
G PRDM14 PR/SET domain 14 TAS RGD PMID:24825349 RGD:8695944 NCBI chr 8:70,051,651...70,071,252
Ensembl chr 8:70,051,651...70,071,693
JBrowse link
G SIN3A SIN3 transcription regulator family member A TAS RGD PMID:24825349 RGD:8695944 NCBI chr15:75,369,379...75,455,815
Ensembl chr15:75,369,379...75,455,842
JBrowse link
G SPI1 Spi-1 proto-oncogene TAS RGD PMID:24825349 RGD:8695944 NCBI chr11:47,354,860...47,378,547
Ensembl chr11:47,354,860...47,378,547
JBrowse link
G TET1 tet methylcytosine dioxygenase 1 TAS RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr10:68,560,337...68,694,487
Ensembl chr10:68,560,337...68,694,487
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 TAS RGD PMID:22770212 PMID:24825349 RGD:8695943, RGD:8695944 NCBI chr 4:105,145,875...105,279,803
Ensembl chr 4:105,145,875...105,279,816
JBrowse link
G TET3 tet methylcytosine dioxygenase 3 TAS RGD PMID:22770212 PMID:23697932 PMID:24825349 RGD:8695943, RGD:9479164, RGD:8695944 NCBI chr 2:73,983,631...74,135,498
Ensembl chr 2:73,984,910...74,108,176
JBrowse link
G UHRF1 ubiquitin like with PHD and ring finger domains 1 TAS RGD PMID:23324617 RGD:8695954 NCBI chr19:4,903,080...4,962,154
Ensembl chr19:4,903,080...4,962,154
JBrowse link
G UHRF2 ubiquitin like with PHD and ring finger domains 2 TAS RGD PMID:23324617 RGD:8695954 NCBI chr 9:6,413,199...6,507,054
Ensembl chr 9:6,413,151...6,507,054
JBrowse link
G ZBTB33 zinc finger and BTB domain containing 33 TAS RGD PMID:23324617 RGD:8695954 NCBI chr  X:120,250,812...120,258,398
Ensembl chr  X:120,250,752...120,258,398
JBrowse link
G ZBTB38 zinc finger and BTB domain containing 38 TAS RGD PMID:23324617 RGD:8695954 NCBI chr 3:141,324,186...141,449,792
Ensembl chr 3:141,324,213...141,449,792
JBrowse link
G ZBTB4 zinc finger and BTB domain containing 4 TAS RGD PMID:23324617 RGD:8695954 NCBI chr17:7,459,378...7,484,249
Ensembl chr17:7,459,366...7,484,263
JBrowse link
G ZFP57 ZFP57 zinc finger protein TAS RGD PMID:23324617 RGD:8695954 NCBI chr 6:29,672,392...29,681,152
Ensembl chr 6:29,672,483...29,681,155
JBrowse link
electron transport chain pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5F1A ATP synthase F1 subunit alpha EXP SMPDB SMP:00355 NCBI chr18:46,080,248...46,104,227
Ensembl chr18:46,080,248...46,104,334
JBrowse link
G ATP5F1B ATP synthase F1 subunit beta EXP SMPDB SMP:00355 NCBI chr12:56,638,175...56,645,984
Ensembl chr12:56,638,175...56,645,984
JBrowse link
G ATP5F1C ATP synthase F1 subunit gamma EXP SMPDB SMP:00355 NCBI chr10:7,788,177...7,807,801
Ensembl chr10:7,788,147...7,807,815
JBrowse link
G ATP5F1D ATP synthase F1 subunit delta EXP SMPDB SMP:00355 NCBI chr19:1,241,751...1,244,825
Ensembl chr19:1,241,746...1,244,825
JBrowse link
G ATP5F1E ATP synthase F1 subunit epsilon EXP SMPDB SMP:00355 NCBI chr20:59,025,475...59,032,335
Ensembl chr20:59,025,475...59,032,345
JBrowse link
G ATP5MC2 ATP synthase membrane subunit c locus 2 EXP SMPDB SMP:00355 NCBI chr12:53,665,170...53,681,423
Ensembl chr12:53,632,726...53,677,408
JBrowse link
G ATP5PB ATP synthase peripheral stalk-membrane subunit b EXP SMPDB SMP:00355 NCBI chr 1:111,449,464...111,462,773
Ensembl chr 1:111,448,864...111,462,773
JBrowse link
G CYCS cytochrome c, somatic EXP SMPDB SMP:00355 NCBI chr 7:25,118,656...25,125,260
Ensembl chr 7:25,118,656...25,125,260
JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase EXP SMPDB SMP:00355 NCBI chr12:6,534,517...6,538,371
Ensembl chr12:6,534,512...6,538,374
JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 EXP SMPDB SMP:00355 NCBI chr12:50,104,008...50,111,313
Ensembl chr12:50,103,982...50,111,313
JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 EXP SMPDB SMP:00355 NCBI chr 2:156,400,281...156,586,403
Ensembl chr 2:156,435,290...156,613,735
JBrowse link
G MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 EXP SMPDB SMP:00355 NCBI chr MT:8,527...9,207
Ensembl chr MT:8,527...9,207
JBrowse link
G MT-CO1 mitochondrially encoded cytochrome c oxidase I EXP SMPDB SMP:00355 NCBI chr MT:5,904...7,445
Ensembl chr MT:5,904...7,445
JBrowse link
G NDUFA1 NADH:ubiquinone oxidoreductase subunit A1 EXP SMPDB SMP:00355 NCBI chr  X:119,871,832...119,876,662
Ensembl chr  X:119,871,832...119,876,662
JBrowse link
G SDHA succinate dehydrogenase complex flavoprotein subunit A TAS
EXP
SMPDB
RGD
PMID:16143825 SMP:00355, RGD:2306881 NCBI chr 5:218,320...268,746
Ensembl chr 5:218,303...257,082
JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B TAS
EXP
SMPDB
RGD
PMID:16143825 SMP:00355, RGD:2306881 NCBI chr 1:17,018,722...17,054,032
Ensembl chr 1:17,018,722...17,054,032
JBrowse link
G SDHC succinate dehydrogenase complex subunit C TAS
EXP
SMPDB
RGD
PMID:16143825 SMP:00355, RGD:2306881 NCBI chr 1:161,314,381...161,363,206
Ensembl chr 1:161,314,381...161,363,206
JBrowse link
G SDHD succinate dehydrogenase complex subunit D ISO
EXP
TAS
SMPDB
RGD
PMID:15572694 PMID:16143825 SMP:00355, RGD:1580035, RGD:2306881 NCBI chr11:112,086,873...112,095,794
Ensembl chr11:112,086,824...112,120,016
JBrowse link
G SLC25A4 solute carrier family 25 member 4 EXP SMPDB SMP:00355 NCBI chr 4:185,143,266...185,150,382
Ensembl chr 4:185,143,266...185,150,382
JBrowse link
G SLC37A4 solute carrier family 37 member 4 EXP SMPDB SMP:00355 NCBI chr11:119,024,112...119,030,877
Ensembl chr11:119,023,751...119,030,906
JBrowse link
G UQCRC1 ubiquinol-cytochrome c reductase core protein 1 EXP SMPDB SMP:00355 NCBI chr 3:48,599,002...48,609,646
Ensembl chr 3:48,599,002...48,610,976
JBrowse link
G UQCRH ubiquinol-cytochrome c reductase hinge protein ISO experiments done with purified bovine protein RGD PMID:3036796 RGD:2301375 NCBI chr 1:46,303,698...46,316,776
Ensembl chr 1:46,303,698...46,316,776
JBrowse link
energy homeostasis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LEP leptin TAS RGD PMID:12079865 RGD:1357909 NCBI chr 7:128,241,278...128,257,629
Ensembl chr 7:128,241,278...128,257,629
JBrowse link
G LEPR leptin receptor TAS RGD PMID:12079865 RGD:1357909 NCBI chr 1:65,420,652...65,641,559
Ensembl chr 1:65,420,652...65,641,559
JBrowse link
epinephrine signaling pathway via adrenergic receptor beta term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB2 adrenoceptor beta 2 TAS RGD PMID:19110970 RGD:4140391 NCBI chr 5:148,826,611...148,828,623
Ensembl chr 5:148,826,611...148,828,623
JBrowse link
G ARRB1 arrestin beta 1 TAS RGD PMID:19229505 PMID:18268361 RGD:5135529, RGD:4140419 NCBI chr11:75,260,122...75,351,661
Ensembl chr11:75,260,122...75,351,705
JBrowse link
G ARRB2 arrestin beta 2 TAS RGD PMID:19229505 PMID:18268361 RGD:5135529, RGD:4140419 NCBI chr17:4,710,632...4,721,497
Ensembl chr17:4,710,596...4,721,499
JBrowse link
G GNAS GNAS complex locus TAS RGD PMID:19110970 RGD:4140391 NCBI chr20:58,839,748...58,911,192
Ensembl chr20:58,839,718...58,911,192
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 TAS RGD PMID:19110970 PMID:19229505 RGD:4140391, RGD:5135529 NCBI chr11:67,266,473...67,286,556
Ensembl chr11:67,266,473...67,286,556
JBrowse link
G GRK5 G protein-coupled receptor kinase 5 TAS RGD PMID:19110970 PMID:19229505 RGD:4140391, RGD:5135529 NCBI chr10:119,207,571...119,459,745
Ensembl chr10:119,207,571...119,459,745
JBrowse link
G SNX13 sorting nexin 13 TAS RGD PMID:17173929 RGD:4140388 NCBI chr 7:17,790,761...17,940,494
Ensembl chr 7:17,790,761...17,940,501
JBrowse link
facilitative sugar transporter mediated glucose transport pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC2A1 solute carrier family 2 member 1 TAS
ISO
RGD PMID:15449578 PMID:2211693 PMID:15466941 RGD:1626159, RGD:2303167, RGD:1625539 NCBI chr 1:42,925,353...42,958,868
Ensembl chr 1:42,925,353...42,958,893
JBrowse link
G SLC2A2 solute carrier family 2 member 2 TAS RGD PMID:15449578 RGD:1626159 NCBI chr 3:170,996,347...171,026,720
Ensembl chr 3:170,996,347...171,026,743
JBrowse link
G SLC2A3 solute carrier family 2 member 3 TAS RGD PMID:15449578 PMID:15466941 RGD:1626159, RGD:1625539 NCBI chr12:7,919,230...7,936,187
Ensembl chr12:7,919,230...7,936,187
JBrowse link
G SLC2A4 solute carrier family 2 member 4 TAS RGD PMID:15449578 PMID:15466941 RGD:1626159, RGD:1625539 NCBI chr17:7,281,718...7,288,257
Ensembl chr17:7,281,718...7,288,257
JBrowse link
fibrinolysis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPB2 carboxypeptidase B2 TAS RGD PMID:26149056 RGD:11352249 NCBI chr13:46,053,186...46,105,033
Ensembl chr13:46,053,186...46,105,033
JBrowse link
G FGA fibrinogen alpha chain TAS RGD PMID:26149056 RGD:11352249 NCBI chr 4:154,583,126...154,590,742
Ensembl chr 4:154,583,126...154,590,742
JBrowse link
G FGB fibrinogen beta chain TAS RGD PMID:26149056 RGD:11352249 NCBI chr 4:154,562,980...154,572,807
Ensembl chr 4:154,563,011...154,572,807
JBrowse link
G FGG fibrinogen gamma chain TAS RGD PMID:26149056 RGD:11352249 NCBI chr 4:154,604,136...154,612,656
Ensembl chr 4:154,604,134...154,612,967
JBrowse link
G PLAT plasminogen activator, tissue type TAS RGD PMID:26149056 RGD:11352249 NCBI chr 8:42,174,718...42,207,565
Ensembl chr 8:42,174,718...42,207,709
JBrowse link
G PLAU plasminogen activator, urokinase TAS RGD PMID:26149056 RGD:11352249 NCBI chr10:73,909,164...73,917,494
Ensembl chr10:73,909,177...73,917,496
JBrowse link
G PLG plasminogen TAS RGD PMID:26149056 RGD:11352249 NCBI chr 6:160,702,193...160,754,097
Ensembl chr 6:160,702,194...160,754,097
JBrowse link
G SERPINA5 serpin family A member 5 TAS RGD PMID:26149056 RGD:11352249 NCBI chr14:94,581,426...94,593,118
Ensembl chr14:94,561,442...94,593,118
JBrowse link
G SERPINB2 serpin family B member 2 TAS RGD PMID:26149056 RGD:11352249 NCBI chr18:63,887,705...63,903,888
Ensembl chr18:63,871,692...63,903,888
JBrowse link
G SERPINE1 serpin family E member 1 TAS RGD PMID:26149056 RGD:11352249 NCBI chr 7:101,127,104...101,139,247
Ensembl chr 7:101,127,104...101,139,247
JBrowse link
G SERPINE2 serpin family E member 2 TAS RGD PMID:26149056 RGD:11352249 NCBI chr 2:223,975,045...224,039,286
Ensembl chr 2:223,975,045...224,039,318
JBrowse link
G SERPINF2 serpin family F member 2 TAS RGD PMID:26149056 RGD:11352249 NCBI chr17:1,742,871...1,755,265
Ensembl chr17:1,742,836...1,755,265
JBrowse link
folate cycle metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 TAS RGD PMID:22353665 RGD:7242562 NCBI chr 3:126,103,570...126,197,945
Ensembl chr 3:126,103,562...126,197,994
JBrowse link
G AMT aminomethyltransferase TAS RGD PMID:20645850 RGD:7242560 NCBI chr 3:49,416,778...49,422,473
Ensembl chr 3:49,416,778...49,422,685
JBrowse link
G DHFR dihydrofolate reductase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983
JBrowse link
G DLD dihydrolipoamide dehydrogenase TAS RGD PMID:20645850 RGD:7242560 NCBI chr 7:107,891,107...107,921,198
Ensembl chr 7:107,891,162...107,931,730
JBrowse link
G DMGDH dimethylglycine dehydrogenase TAS RGD PMID:20645850 RGD:7242560 NCBI chr 5:78,997,564...79,069,674
Ensembl chr 5:78,997,564...79,236,038
JBrowse link
G FOLH1 folate hydrolase 1 TAS RGD PMID:20814827 PMID:16859665 RGD:7242426, RGD:7242559 NCBI chr11:49,145,092...49,208,602
Ensembl chr11:49,145,092...49,208,638
JBrowse link
G FOLR1 folate receptor alpha TAS RGD PMID:22108709 RGD:7242557 NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323
JBrowse link
G FOLR2 folate receptor beta TAS RGD PMID:22108709 RGD:7242557 NCBI chr11:72,216,794...72,221,950
Ensembl chr11:72,216,601...72,221,950
JBrowse link
G FPGS folylpolyglutamate synthase TAS RGD PMID:16859665 RGD:7242559 NCBI chr 9:127,802,858...127,814,506
Ensembl chr 9:127,794,597...127,814,327
JBrowse link
G GCSH glycine cleavage system protein H TAS RGD PMID:20645850 RGD:7242560 NCBI chr16:81,081,945...81,096,395
Ensembl chr16:81,081,945...81,096,395
JBrowse link
G GGH gamma-glutamyl hydrolase TAS RGD PMID:16859665 RGD:7242559 NCBI chr 8:63,015,079...63,038,806
Ensembl chr 8:63,014,881...63,039,407
JBrowse link
G GLDC glycine decarboxylase TAS RGD PMID:20645850 RGD:7242560 NCBI chr 9:6,532,467...6,645,729
Ensembl chr 9:6,532,467...6,645,729
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 TAS RGD PMID:22108709 RGD:7242557 NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457
JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like TAS RGD PMID:22108709 RGD:7242557 NCBI chr 6:150,865,702...151,101,887
Ensembl chr 6:150,865,679...151,101,887
JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase TAS RGD PMID:20645850 PMID:22108709 RGD:7242560, RGD:7242557 NCBI chr 2:74,198,615...74,217,565
Ensembl chr 2:74,186,172...74,217,565
JBrowse link
G MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like TAS RGD PMID:22108709 RGD:7242557 NCBI chr 4:74,114,560...74,303,099
Ensembl chr 4:74,114,174...74,303,099
JBrowse link
G MTHFR methylenetetrahydrofolate reductase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278
JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase TAS RGD PMID:22108709 RGD:7242557 NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025
JBrowse link
G SARDH sarcosine dehydrogenase TAS RGD PMID:20645850 RGD:7242560 NCBI chr 9:133,659,418...133,739,955
Ensembl chr 9:133,663,560...133,739,955
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 TAS RGD PMID:22108709 RGD:7242557 NCBI chr17:18,327,873...18,363,550
Ensembl chr17:18,327,860...18,363,563
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 TAS RGD PMID:20645850 PMID:22108709 RGD:7242560, RGD:7242557 NCBI chr12:57,229,711...57,234,935
Ensembl chr12:57,229,573...57,234,935
JBrowse link
G SLC19A1 solute carrier family 19 member 1 TAS RGD PMID:22108709 PMID:20814827 RGD:7242557, RGD:7242426 NCBI chr21:45,502,517...45,563,025
Ensembl chr21:45,493,572...45,573,365
JBrowse link
G SLC25A32 solute carrier family 25 member 32 TAS RGD PMID:22332074 RGD:7242561 NCBI chr 8:103,398,638...103,415,107
Ensembl chr 8:103,398,635...103,415,189
JBrowse link
G SLC46A1 solute carrier family 46 member 1 TAS RGD PMID:22108709 PMID:20814827 RGD:7242557, RGD:7242426 NCBI chr17:28,394,642...28,406,592
Ensembl chr17:28,394,642...28,407,197
JBrowse link
folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 IEA KEGG hsa:00670 NCBI chr 3:126,103,570...126,197,945
Ensembl chr 3:126,103,562...126,197,994
JBrowse link
G ALDH1L2 aldehyde dehydrogenase 1 family member L2 IEA KEGG hsa:00670 NCBI chr12:105,019,790...105,084,458
Ensembl chr12:105,019,784...105,107,643
JBrowse link
G AMT aminomethyltransferase IEA KEGG hsa:00670 NCBI chr 3:49,416,778...49,422,473
Ensembl chr 3:49,416,778...49,422,685
JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase IEA
ISO
TAS
KEGG
RGD
PMID:9332377 PMID:22332074 hsa:00670, RGD:70804, RGD:7242561 NCBI chr 2:215,312,059...215,368,592
Ensembl chr 2:215,311,956...215,349,773
JBrowse link
G DHFR dihydrofolate reductase ISS
TAS
IEA
KEGG
RGD
PMID:11502523 PMID:22332074 hsa:00670, RGD:1298877, RGD:7242561 NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983
JBrowse link
G DMGDH dimethylglycine dehydrogenase ISS RGD PMID:15358367 RGD:1547831 NCBI chr 5:78,997,564...79,069,674
Ensembl chr 5:78,997,564...79,236,038
JBrowse link
G FOLH1 folate hydrolase 1 ISS RGD PMID:9501243 RGD:728645 NCBI chr11:49,145,092...49,208,602
Ensembl chr11:49,145,092...49,208,638
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase IEA KEGG hsa:00670 NCBI chr21:46,136,262...46,155,579
Ensembl chr21:46,136,160...46,155,579
JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IDA
TAS
IEA
KEGG
RGD
PMID:12450384 PMID:22332074 hsa:00670, RGD:1547842, RGD:7242561 NCBI chr21:33,503,931...33,542,893
Ensembl chr21:33,503,931...33,543,491
JBrowse link
G GNMT glycine N-methyltransferase ISO RGD PMID:8278367 RGD:1545057 NCBI chr 6:42,960,754...42,963,880
Ensembl chr 6:42,960,754...42,963,880
JBrowse link
G MTFMT mitochondrial methionyl-tRNA formyltransferase IEA KEGG hsa:00670 NCBI chr15:65,001,512...65,029,639
Ensembl chr15:65,001,512...65,029,639
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 IEA
TAS
ISS
KEGG
RGD
PMID:22332074 PMID:2186031 hsa:00670, RGD:7242561, RGD:1299513 NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457
JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like IEA KEGG hsa:00670 NCBI chr 6:150,865,702...151,101,887
Ensembl chr 6:150,865,679...151,101,887
JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase TAS
IEA
KEGG
RGD
PMID:9454603 hsa:00670, RGD:1540378 NCBI chr 2:74,198,615...74,217,565
Ensembl chr 2:74,186,172...74,217,565
JBrowse link
G MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like IEA KEGG hsa:00670 NCBI chr 4:74,114,560...74,303,099
Ensembl chr 4:74,114,174...74,303,099
JBrowse link
G MTHFR methylenetetrahydrofolate reductase TAS
IEA
KEGG
RGD
PMID:11933257 PMID:22332074 hsa:00670, RGD:1535021, RGD:7242561 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455
JBrowse link
G MTHFS methenyltetrahydrofolate synthetase IEA KEGG hsa:00670 NCBI chr15:79,843,547...79,897,285
Ensembl chr15:79,833,585...79,897,379
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase IEA
TAS
ISS
KEGG
RGD
PMID:20814827 PMID:15845641 hsa:00670, RGD:7242426, RGD:1359026 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278
JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase TAS RGD PMID:20814827 RGD:7242426 NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 TAS
IEA
ISO
KEGG
RGD
PMID:15671219 PMID:22332074 PMID:3110140 hsa:00670, RGD:1359815, RGD:7242561, RGD:2300383 NCBI chr17:18,327,873...18,363,550
Ensembl chr17:18,327,860...18,363,563
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 TAS
IEA
ISO
KEGG
RGD
PMID:15671219 PMID:22332074 PMID:3110140 hsa:00670, RGD:1359815, RGD:7242561, RGD:2300383 NCBI chr12:57,229,711...57,234,935
Ensembl chr12:57,229,573...57,234,935
JBrowse link
G TYMS thymidylate synthetase IEA
TAS
ISS
KEGG
RGD
PMID:22332074 PMID:9894005 hsa:00670, RGD:7242561, RGD:1545055 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
JBrowse link
folate metabolic pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 EXP SMPDB SMP:00053 NCBI chr 3:126,103,570...126,197,945
Ensembl chr 3:126,103,562...126,197,994
JBrowse link
G ALPG alkaline phosphatase, germ cell IEA KEGG hsa:00790 NCBI chr 2:232,406,844...232,410,714
Ensembl chr 2:232,406,844...232,410,714
JBrowse link
G ALPI alkaline phosphatase, intestinal IEA KEGG hsa:00790 NCBI chr 2:232,456,153...232,460,753
Ensembl chr 2:232,456,125...232,460,753
JBrowse link
G ALPL alkaline phosphatase, biomineralization associated IEA KEGG hsa:00790 NCBI chr 1:21,508,984...21,578,410
Ensembl chr 1:21,509,397...21,578,410
JBrowse link
G ALPP alkaline phosphatase, placental IEA KEGG hsa:00790 NCBI chr 2:232,378,751...232,382,889
Ensembl chr 2:232,378,724...232,382,889
JBrowse link
G DHFR dihydrofolate reductase ISS
EXP
IEA
SMPDB
KEGG
RGD
PMID:11502523 SMP:00053 hsa:00790, RGD:1298877 NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983
JBrowse link
G DMGDH dimethylglycine dehydrogenase ISS RGD PMID:15358367 RGD:1547831 NCBI chr 5:78,997,564...79,069,674
Ensembl chr 5:78,997,564...79,236,038
JBrowse link
G FOLH1 folate hydrolase 1 IDA RGD PMID:9816319 RGD:151347637 NCBI chr11:49,145,092...49,208,602
Ensembl chr11:49,145,092...49,208,638
JBrowse link
G FOLR2 folate receptor beta TAS RGD PMID:8445646 RGD:1540379 NCBI chr11:72,216,794...72,221,950
Ensembl chr11:72,216,601...72,221,950
JBrowse link
G FPGS folylpolyglutamate synthase IEA
EXP
KEGG
SMPDB
SMP:00053 hsa:00790 NCBI chr 9:127,802,858...127,814,506
Ensembl chr 9:127,794,597...127,814,327
JBrowse link
G FTCD formimidoyltransferase cyclodeaminase EXP SMPDB SMP:00053 NCBI chr21:46,136,262...46,155,579
Ensembl chr21:46,136,160...46,155,579
JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase IDA RGD PMID:12450384 RGD:1547842 NCBI chr21:33,503,931...33,542,893
Ensembl chr21:33,503,931...33,543,491
JBrowse link
G GCH1 GTP cyclohydrolase 1 IEA KEGG hsa:00790 NCBI chr14:54,842,017...54,902,826
Ensembl chr14:54,842,008...54,902,826
JBrowse link
G GGH gamma-glutamyl hydrolase IEA
EXP
KEGG
SMPDB
SMP:00053 hsa:00790 NCBI chr 8:63,015,079...63,038,806
Ensembl chr 8:63,014,881...63,039,407
JBrowse link
G GNMT glycine N-methyltransferase ISO RGD PMID:15347642 RGD:1359070 NCBI chr 6:42,960,754...42,963,880
Ensembl chr 6:42,960,754...42,963,880
JBrowse link
G MOCS1 molybdenum cofactor synthesis 1 IEA KEGG hsa:00790 NCBI chr 6:39,904,170...39,934,462
Ensembl chr 6:39,899,578...39,934,551
JBrowse link
G MOCS2 molybdenum cofactor synthesis 2 IEA KEGG hsa:00790 NCBI chr 5:53,095,679...53,109,757
Ensembl chr 5:53,095,679...53,110,063
JBrowse link
G MTFMT mitochondrial methionyl-tRNA formyltransferase EXP SMPDB SMP:00053 NCBI chr15:65,001,512...65,029,639
Ensembl chr15:65,001,512...65,029,639
JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISS
EXP
SMPDB
RGD
PMID:2186031 SMP:00053, RGD:1299513 NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457
JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like EXP SMPDB SMP:00053 NCBI chr 6:150,865,702...151,101,887
Ensembl chr 6:150,865,679...151,101,887
JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase TAS
EXP
SMPDB
RGD
PMID:9454603 SMP:00053, RGD:1540378 NCBI chr 2:74,198,615...74,217,565
Ensembl chr 2:74,186,172...74,217,565
JBrowse link
G MTHFR methylenetetrahydrofolate reductase TAS
EXP
SMPDB
RGD
PMID:11933257 SMP:00053, RGD:1535021 NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455
JBrowse link
G MTHFS methenyltetrahydrofolate synthetase EXP SMPDB SMP:00053 NCBI chr15:79,843,547...79,897,285
Ensembl chr15:79,833,585...79,897,379
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISS RGD PMID:15845641 RGD:1359026 NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278
JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase TAS RGD PMID:15979034 RGD:1359037 NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025
JBrowse link
G PTS 6-pyruvoyltetrahydropterin synthase IEA KEGG hsa:00790 NCBI chr11:112,226,428...112,233,973
Ensembl chr11:112,226,367...112,269,955
JBrowse link
G QDPR quinoid dihydropteridine reductase IEA KEGG hsa:00790 NCBI chr 4:17,486,395...17,512,090
Ensembl chr 4:17,460,261...17,512,206
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 TAS RGD PMID:15671219 RGD:1359815 NCBI chr17:18,327,873...18,363,550
Ensembl chr17:18,327,860...18,363,563
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 TAS RGD PMID:15671219 RGD:1359815 NCBI chr12:57,229,711...57,234,935
Ensembl chr12:57,229,573...57,234,935
JBrowse link
G SLC19A1 solute carrier family 19 member 1 ISS RGD PMID:11600421 RGD:735239 NCBI chr21:45,502,517...45,563,025
Ensembl chr21:45,493,572...45,573,365
JBrowse link
G SLC46A1 solute carrier family 46 member 1 EXP SMPDB SMP:00053 NCBI chr17:28,394,642...28,406,592
Ensembl chr17:28,394,642...28,407,197
JBrowse link
G SPR sepiapterin reductase IEA KEGG hsa:00790 NCBI chr 2:72,887,408...72,892,158
Ensembl chr 2:72,887,382...72,892,158
JBrowse link
G TYMS thymidylate synthetase ISS RGD PMID:9894005 RGD:1545055 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
JBrowse link
ghrelin system pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GHRL ghrelin and obestatin prepropeptide TAS RGD PMID:15788704 RGD:1642818 NCBI chr 3:10,285,666...10,292,947
Ensembl chr 3:10,285,666...10,292,947
JBrowse link
G GHSR growth hormone secretagogue receptor TAS RGD PMID:15788704 RGD:1642818 NCBI chr 3:172,443,291...172,448,456
Ensembl chr 3:172,443,291...172,448,456
JBrowse link
glucagon signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY5 adenylate cyclase 5 ISO RGD PMID:17010343 PMID:10894801 RGD:2315004, RGD:2315006 NCBI chr 3:123,282,296...123,449,090
Ensembl chr 3:123,282,296...123,449,090
JBrowse link
G ADCY6 adenylate cyclase 6 ISO RGD PMID:17010343 PMID:10894801 RGD:2315004, RGD:2315006 NCBI chr12:48,766,194...48,789,974
Ensembl chr12:48,766,194...48,789,089
JBrowse link
G GCG glucagon TAS RGD PMID:16929363 RGD:2315015 NCBI chr 2:162,142,882...162,152,247
Ensembl chr 2:162,142,882...162,152,404
JBrowse link
G GCGR glucagon receptor ISO RGD PMID:15687107 PMID:17010343 RGD:1625210, RGD:2315004 NCBI chr17:81,804,150...81,814,008
Ensembl chr17:81,804,132...81,814,008
JBrowse link
G GNAS GNAS complex locus ISO RGD PMID:15687107 PMID:17010343 RGD:1625210, RGD:2315004 NCBI chr20:58,839,748...58,911,192
Ensembl chr20:58,839,718...58,911,192
JBrowse link
gluconeogenesis pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSS1 acyl-CoA synthetase short chain family member 1 IEA KEGG hsa:00010 NCBI chr20:25,006,237...25,058,139
Ensembl chr20:25,006,230...25,058,980
JBrowse link
G ACSS2 acyl-CoA synthetase short chain family member 2 IEA KEGG hsa:00010 NCBI chr20:34,874,989...34,927,959
Ensembl chr20:34,872,146...34,927,962
JBrowse link
G ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide IEA KEGG hsa:00010 NCBI chr 4:99,276,369...99,290,985
Ensembl chr 4:99,276,369...99,291,003
JBrowse link
G ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide IEA KEGG hsa:00010 NCBI chr 4:99,304,971...99,321,401
Ensembl chr 4:99,304,971...99,352,760
JBrowse link
G ADH1C alcohol dehydrogenase 1C (class I), gamma polypeptide IEA KEGG hsa:00010 NCBI chr 4:99,336,497...99,352,746
Ensembl chr 4:99,336,497...99,352,746
JBrowse link
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide IEA KEGG hsa:00010 NCBI chr 4:99,123,658...99,144,297
Ensembl chr 4:99,123,657...99,157,792
JBrowse link
G ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide IEA KEGG hsa:00010 NCBI chr 4:99,070,978...99,088,788
Ensembl chr 4:99,070,978...99,088,801
JBrowse link
G ADH6 alcohol dehydrogenase 6 (class V) IEA KEGG hsa:00010 NCBI chr 4:99,202,639...99,219,246
Ensembl chr 4:99,202,638...99,219,537
JBrowse link
G ADH7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide IEA KEGG hsa:00010 NCBI chr 4:99,412,263...99,435,342
Ensembl chr 4:99,412,261...99,435,510
JBrowse link
G ADPGK ADP dependent glucokinase IEA KEGG hsa:00010 NCBI chr15:72,751,294...72,783,758
Ensembl chr15:72,751,294...72,785,846
JBrowse link
G AKR1A1 aldo-keto reductase family 1 member A1 IEA KEGG hsa:00010 NCBI chr 1:45,550,826...45,570,049
Ensembl chr 1:45,550,543...45,570,049
JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 IEA KEGG hsa:00010 NCBI chr15:100,879,831...100,916,626
Ensembl chr15:100,877,714...100,916,626
JBrowse link
G ALDH1B1 aldehyde dehydrogenase 1 family member B1 IEA KEGG hsa:00010 NCBI chr 9:38,392,702...38,398,661
Ensembl chr 9:38,392,702...38,398,661