Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:glycerophospholipid metabolic pathway
go back to main search page
Accession:PW:0000354 term browser browse the term
Definition:Those metabolic reactions involved in the synthesis, utilization and/or degradation of glycerophospholipids, also known as phospholipids. They are key components of membranes and some are also involved in signaling.
Synonyms:related_synonym: glycerophospholipid metabolic process;   phospholipid metabolic pathway


show annotations for term's descendants           Sort by:
glycerophospholipid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr12:19,406,133...19,413,713
Ensembl chr12:19,407,360...19,413,651 		JBrowse link
G Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr20:4,135,955...4,144,880
Ensembl chr20:4,135,957...4,145,278 		JBrowse link
G Agpat2 1-acylglycerol-3-phosphate O-acyltransferase 2 IEA KEGG rno:00564 NCBI chr 3:9,416,837...9,428,567
Ensembl chr 3:9,416,843...9,428,371 		JBrowse link
G Agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 IEA KEGG rno:00564 NCBI chr20:10,330,960...10,415,358
Ensembl chr20:10,384,507...10,415,358 		JBrowse link
G Agpat4 1-acylglycerol-3-phosphate O-acyltransferase 4 IEA KEGG rno:00564 NCBI chr 1:48,525,131...48,633,798
Ensembl chr 1:48,527,323...48,633,345 		JBrowse link
G Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 1:181,583,098...181,587,409
Ensembl chr 1:181,583,141...181,587,408 		JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr14:7,820,328...7,882,943
Ensembl chr14:7,820,351...7,882,681 		JBrowse link
G Cds2 CDP-diacylglycerol synthase 2 IEA KEGG rno:00564 NCBI chr 3:119,514,963...119,553,555
Ensembl chr 3:119,515,000...119,553,541 		JBrowse link
G Cept1 choline/ethanolamine phosphotransferase 1 IEA KEGG rno:00564 NCBI chr 2:193,994,220...194,036,141
Ensembl chr 2:193,993,447...194,035,578 		JBrowse link
G Chat choline O-acetyltransferase IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr16:7,657,362...7,717,093
Ensembl chr16:7,657,362...7,717,093 		JBrowse link
G Chka choline kinase alpha IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 1:201,076,804...201,125,517
Ensembl chr 1:201,076,860...201,125,516 		JBrowse link
G Chkb choline kinase beta IEA KEGG rno:00564 NCBI chr 7:120,500,960...120,504,359
Ensembl chr 7:120,500,984...120,504,461 		JBrowse link
G Chpt1 choline phosphotransferase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 7:22,866,455...22,915,111
Ensembl chr 7:22,863,027...22,915,103 		JBrowse link
G Crls1 cardiolipin synthase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 3:120,119,822...120,138,674
Ensembl chr 3:120,119,852...120,138,655 		JBrowse link
G Dgka diacylglycerol kinase, alpha IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 7:1,148,734...1,175,324
Ensembl chr 7:1,148,735...1,175,110 		JBrowse link
G Dgkb diacylglycerol kinase, beta IEA KEGG rno:00564 NCBI chr 6:54,640,948...55,397,210
Ensembl chr 6:54,641,614...55,397,043 		JBrowse link
G Dgkd diacylglycerol kinase, delta IEA KEGG rno:00564 NCBI chr 9:88,516,686...88,607,349
Ensembl chr 9:88,516,715...88,607,345 		JBrowse link
G Dgkg diacylglycerol kinase, gamma IEA KEGG rno:00564 NCBI chr11:78,384,212...78,579,158
Ensembl chr11:78,384,458...78,577,212 		JBrowse link
G Dgki diacylglycerol kinase, iota IEA KEGG rno:00564 NCBI chr 4:65,410,878...65,872,733
Ensembl chr 4:65,420,108...65,872,733 		JBrowse link
G Dgkq diacylglycerol kinase, theta IEA KEGG rno:00564 NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131 		JBrowse link
G Dgkz diacylglycerol kinase zeta IEA KEGG rno:00564 NCBI chr 3:77,904,149...77,946,114
Ensembl chr 3:77,904,150...77,946,099 		JBrowse link
G Etnk1 ethanolamine kinase 1 IEA KEGG rno:00564 NCBI chr 4:176,126,056...176,170,325
Ensembl chr 4:176,126,180...176,193,770 		JBrowse link
G Etnk2 ethanolamine kinase 2 IEA KEGG rno:00564 NCBI chr13:44,811,012...44,829,052
Ensembl chr13:44,811,015...44,829,037 		JBrowse link
G Gde1 glycerophosphodiester phosphodiesterase 1 ISO SMPDB SMP:00025 NCBI chr 1:173,016,984...173,032,396
Ensembl chr 1:172,954,394...173,032,429 		JBrowse link
G Gnpat glyceronephosphate O-acyltransferase IEA KEGG rno:00564 NCBI chr19:52,822,326...52,848,872
Ensembl chr19:52,822,319...52,852,361 		JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 1:254,106,323...254,170,755
Ensembl chr 1:254,106,331...254,142,639 		JBrowse link
G Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial IEA KEGG rno:00564 NCBI chr 3:114,646,446...114,657,051
Ensembl chr 3:114,648,498...114,657,051 		JBrowse link
G Gpat3 glycerol-3-phosphate acyltransferase 3 IEA KEGG rno:00564 NCBI chr14:8,715,367...8,768,051
Ensembl chr14:8,714,373...8,766,490 		JBrowse link
G Gpat4 glycerol-3-phosphate acyltransferase 4 IEA KEGG rno:00564 NCBI chr16:68,819,031...68,852,903
Ensembl chr16:68,819,079...68,852,901 		JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 7:130,842,526...130,851,530
Ensembl chr 7:130,844,138...130,851,529 		JBrowse link
G Gpd1l glycerol-3-phosphate dehydrogenase 1 like IEA KEGG rno:00564 NCBI chr 8:114,591,103...114,620,771
Ensembl chr 8:114,588,487...114,620,723 		JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 3:41,800,552...41,937,729
Ensembl chr 3:41,801,930...41,936,901 		JBrowse link
G Lcat lecithin cholesterol acyltransferase IEA KEGG rno:00564 NCBI chr19:33,834,748...33,838,214
Ensembl chr19:33,834,403...33,838,231 		JBrowse link
G Lclat1 lysocardiolipin acyltransferase 1 IEA KEGG rno:00564 NCBI chr 6:22,228,933...22,373,246
Ensembl chr 6:22,228,942...22,373,181 		JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 IEA KEGG rno:00564 NCBI chr 1:29,766,070...29,816,401
Ensembl chr 1:29,766,071...29,816,401 		JBrowse link
G Lpcat2 lysophosphatidylcholine acyltransferase 2 IEA KEGG rno:00564 NCBI chr19:14,088,389...14,152,742
Ensembl chr19:14,089,686...14,152,829 		JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 IEA KEGG rno:00564 NCBI chr 4:157,468,397...157,509,889
Ensembl chr 4:157,468,290...157,509,880 		JBrowse link
G Lpcat4 lysophosphatidylcholine acyltransferase 4 IEA KEGG rno:00564 NCBI chr 3:99,044,729...99,052,963
Ensembl chr 3:99,044,729...99,052,875 		JBrowse link
G Lpgat1 lysophosphatidylglycerol acyltransferase 1 IEA KEGG rno:00564 NCBI chr13:103,294,622...103,365,372
Ensembl chr13:103,294,528...103,362,333 		JBrowse link
G Lypla1 lysophospholipase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 5:14,679,605...14,708,774
Ensembl chr 5:14,679,606...14,708,746 		JBrowse link
G Lypla2 lysophospholipase 2 IEA KEGG rno:00564 NCBI chr 5:148,198,466...148,203,062
Ensembl chr 5:148,198,439...148,203,092 		JBrowse link
G Mboat1 membrane bound O-acyltransferase domain containing 1 IEA KEGG rno:00564 NCBI chr17:34,331,413...34,445,088
Ensembl chr17:34,331,422...34,445,088 		JBrowse link
G Mboat2 membrane bound O-acyltransferase domain containing 2 IEA KEGG rno:00564 NCBI chr 6:41,471,135...41,597,599
Ensembl chr 6:41,471,161...41,593,485 		JBrowse link
G Pcyt1a phosphate cytidylyltransferase 1A, choline IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr11:68,313,860...68,357,828
Ensembl chr11:68,313,882...68,357,357 		JBrowse link
G Pcyt1b phosphate cytidylyltransferase 1B, choline IEA KEGG rno:00564 NCBI chr  X:58,378,090...58,471,623
Ensembl chr  X:58,378,116...58,468,935 		JBrowse link
G Pcyt2 phosphate cytidylyltransferase 2, ethanolamine IEA KEGG rno:00564 NCBI chr10:105,888,769...105,896,182
Ensembl chr10:105,888,775...105,896,172 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013 		JBrowse link
G Pgs1 phosphatidylglycerophosphate synthase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr10:103,214,635...103,250,254
Ensembl chr10:103,214,646...103,250,254 		JBrowse link
G Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr10:80,762,062...80,769,596
Ensembl chr10:80,760,792...80,770,342 		JBrowse link
G Pisd phosphatidylserine decarboxylase IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr14:77,941,927...77,991,021
Ensembl chr14:77,941,948...77,991,003 		JBrowse link
G Pla2g10 phospholipase A2, group X IEA KEGG rno:00564 NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000 		JBrowse link
G Pla2g12a phospholipase A2, group XIIA IEA KEGG rno:00564 NCBI chr 2:218,436,497...218,452,742
Ensembl chr 2:218,436,513...218,452,740 		JBrowse link
G Pla2g12b phospholipase A2, group XIIB IEA KEGG rno:00564 NCBI chr20:27,369,196...27,389,517
Ensembl chr20:27,370,266...27,388,743 		JBrowse link
G Pla2g15 phospholipase A2, group XV IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr19:34,050,685...34,068,070
Ensembl chr19:34,050,694...34,068,063 		JBrowse link
G Pla2g1b phospholipase A2 group IB IEA KEGG rno:00564 NCBI chr12:41,142,193...41,151,967
Ensembl chr12:41,142,200...41,153,226 		JBrowse link
G Pla2g2a phospholipase A2 group IIA IEA KEGG rno:00564 NCBI chr 5:151,076,442...151,079,019
Ensembl chr 5:151,076,442...151,079,014 		JBrowse link
G Pla2g2c phospholipase A2, group IIC IEA KEGG rno:00564 NCBI chr 5:150,959,365...150,981,388
Ensembl chr 5:150,959,182...150,981,377 		JBrowse link
G Pla2g2d phospholipase A2, group IID IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 5:151,016,010...151,022,531
Ensembl chr 5:151,018,870...151,022,525 		JBrowse link
G Pla2g2f phospholipase A2, group IIF IEA KEGG rno:00564 NCBI chr 5:150,986,788...150,993,175
Ensembl chr 5:150,986,788...150,993,175 		JBrowse link
G Pla2g3 phospholipase A2, group III IEA KEGG rno:00564 NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913 		JBrowse link
G Pla2g4a phospholipase A2 group IVA IEA KEGG rno:00564 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266 		JBrowse link
G Pla2g4b phospholipase A2 group IVB IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 3:107,004,238...107,013,853
Ensembl chr 3:107,005,489...107,013,853 		JBrowse link
G Pla2g4e phospholipase A2, group IVE IEA KEGG rno:00564 NCBI chr 3:107,132,540...107,198,609
Ensembl chr 3:107,132,541...107,198,233 		JBrowse link
G Pla2g4f phospholipase A2, group IVF IEA KEGG rno:00564 NCBI chr 3:107,249,053...107,266,201
Ensembl chr 3:107,250,075...107,264,689 		JBrowse link
G Pla2g5 phospholipase A2, group V IEA KEGG rno:00564 NCBI chr 5:151,041,339...151,109,433
Ensembl chr 5:151,041,340...151,062,658 		JBrowse link
G Pla2g6 phospholipase A2 group VI IEA KEGG rno:00564 NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114 		JBrowse link
G Plb1 phospholipase B1 IEA KEGG rno:00564 NCBI chr 6:24,087,051...24,227,167
Ensembl chr 6:24,089,214...24,210,117 		JBrowse link
G Pld1 phospholipase D1 IEA KEGG rno:00564 NCBI chr 2:110,849,205...111,047,304
Ensembl chr 2:110,893,608...111,047,692 		JBrowse link
G Pld2 phospholipase D2 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr10:55,256,326...55,274,192
Ensembl chr10:55,256,359...55,272,808 		JBrowse link
G Plpp1 phospholipid phosphatase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 2:44,439,002...44,500,430
Ensembl chr 2:44,438,994...44,501,268 		JBrowse link
G Plpp2 phospholipid phosphatase 2 IEA KEGG rno:00564 NCBI chr 7:10,175,918...10,184,032
Ensembl chr 7:10,175,948...10,184,071 		JBrowse link
G Plpp3 phospholipid phosphatase 3 IEA KEGG rno:00564 NCBI chr 5:119,927,085...120,002,206
Ensembl chr 5:119,927,085...120,002,205 		JBrowse link
G Pnpla6 patatin-like phospholipase domain containing 6 IEA KEGG rno:00564 NCBI chr12:1,574,387...1,603,735
Ensembl chr12:1,560,363...1,603,734 		JBrowse link
G Pnpla7 patatin-like phospholipase domain containing 7 IEA KEGG rno:00564 NCBI chr 3:7,782,572...7,861,504
Ensembl chr 3:7,782,572...7,861,497 		JBrowse link
G Ptdss1 phosphatidylserine synthase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 7:63,845,017...63,906,791
Ensembl chr 7:63,844,268...63,906,791 		JBrowse link
G Ptdss2 phosphatidylserine synthase 2 IEA
ISO		 KEGG
SMPDB		 SMP:00025 rno:00564 NCBI chr 1:196,241,439...196,267,632
Ensembl chr 1:196,241,494...196,267,685 		JBrowse link
G Ptpmt1 protein tyrosine phosphatase, mitochondrial 1 ISO SMPDB SMP:00025 NCBI chr 3:76,889,922...76,899,427
Ensembl chr 3:76,889,922...76,899,427 		JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase IEA KEGG rno:00564 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001 		JBrowse link
cardiolipin biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crls1 cardiolipin synthase 1 ISO RGD PMID:24769127 RGD:10400850 NCBI chr 3:120,119,822...120,138,674
Ensembl chr 3:120,119,852...120,138,655 		JBrowse link
G Pgs1 phosphatidylglycerophosphate synthase 1 ISO RGD PMID:24769127 RGD:10400850 NCBI chr10:103,214,635...103,250,254
Ensembl chr10:103,214,646...103,250,254 		JBrowse link
G Ptpmt1 protein tyrosine phosphatase, mitochondrial 1 ISO RGD PMID:24769127 RGD:10400850 NCBI chr 3:76,889,922...76,899,427
Ensembl chr 3:76,889,922...76,899,427 		JBrowse link
G Tamm41 TAM41 mitochondrial translocator assembly and maintenance homolog ISO RGD PMID:24769127 RGD:10400850 NCBI chr 4:148,070,388...148,103,728
Ensembl chr 4:148,018,463...148,103,694 		JBrowse link
cardiolipin metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ckmt1 creatine kinase, mitochondrial 1 ISO RGD PMID:24769127 RGD:10400850 NCBI chr 3:108,329,859...108,335,760
Ensembl chr 3:108,330,705...108,335,758 		JBrowse link
G Cycs cytochrome c, somatic ISO RGD PMID:24769127 RGD:10400850 NCBI chr 4:79,651,894...79,653,994
Ensembl chr 4:79,651,378...79,654,054
Ensembl chr18:79,651,378...79,654,054 		JBrowse link
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 ISO RGD PMID:24769127 RGD:10400850 NCBI chr10:15,114,624...15,118,479
Ensembl chr10:15,002,926...15,118,479 		JBrowse link
G Plscr3 phospholipid scramblase 3 ISO RGD PMID:24769127 RGD:10400850 NCBI chr10:54,566,556...54,573,240
Ensembl chr10:54,566,873...54,578,709 		JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase ISO RGD PMID:24769127 RGD:10400850 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001 		JBrowse link
phosphoinositide metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 ISO SMPDB SMP:00463 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221 		JBrowse link
G Becn1 beclin 1 ISO SMPDB SMP:00463 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742 		JBrowse link
G Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase ISO SMPDB SMP:00463 NCBI chr 1:181,583,098...181,587,409
Ensembl chr 1:181,583,141...181,587,408 		JBrowse link
G Egfr epidermal growth factor receptor ISO SMPDB SMP:00463 NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO SMPDB SMP:00463 NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078 		JBrowse link
G Fig4 FIG4 phosphoinositide 5-phosphatase ISO SMPDB SMP:00463 NCBI chr20:44,600,603...44,724,047
Ensembl chr20:44,600,603...44,723,844 		JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase type II B ISO SMPDB SMP:00463 NCBI chr19:25,920,189...26,670,085
Ensembl chr19:25,925,358...26,280,634 		JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D ISO SMPDB SMP:00463 NCBI chr 9:88,287,680...88,392,748
Ensembl chr 9:88,287,677...88,392,746 		JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E ISO SMPDB SMP:00463 NCBI chr 3:9,216,776...9,229,539
Ensembl chr 3:9,216,776...9,229,450 		JBrowse link
G Pi4ka phosphatidylinositol 4-kinase alpha ISO SMPDB SMP:00463 NCBI chr11:83,609,148...83,726,876
Ensembl chr11:83,609,069...83,724,080 		JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha ISO SMPDB SMP:00463 NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472 		JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 ISO SMPDB SMP:00463 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha ISO SMPDB SMP:00463 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032 		JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta ISO SMPDB SMP:00463 NCBI chr 5:160,094,952...160,142,962
Ensembl chr 5:160,094,952...160,120,930 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO SMPDB SMP:00463 NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 ISO SMPDB SMP:00463 NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584 		JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing ISO SMPDB SMP:00463 NCBI chr 9:66,563,747...66,657,873
Ensembl chr 9:66,563,727...66,657,868 		JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha ISO SMPDB SMP:00463 NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029 		JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha ISO SMPDB SMP:00463 NCBI chr 2:182,628,299...182,671,584
Ensembl chr 2:182,628,300...182,671,598 		JBrowse link
G Plcb1 phospholipase C beta 1 ISO SMPDB SMP:00463 NCBI chr 3:122,059,988...122,772,896
Ensembl chr 3:122,060,031...122,772,869 		JBrowse link
G Pten phosphatase and tensin homolog ISO SMPDB SMP:00463 NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838 		JBrowse link
G Synj1 synaptojanin 1 ISO SMPDB SMP:00463 NCBI chr11:30,192,629...30,269,447
Ensembl chr11:30,192,629...30,269,220 		JBrowse link
G Vac14 VAC14 component of PIKFYVE complex ISO SMPDB SMP:00463 NCBI chr19:38,590,569...38,691,911
Ensembl chr19:38,590,569...38,691,909 		JBrowse link
plasmalogen biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 ISO SMPDB SMP:00479 NCBI chr20:4,135,955...4,144,880
Ensembl chr20:4,135,957...4,145,278 		JBrowse link
G Agps alkylglycerone phosphate synthase ISO SMPDB SMP:00479 NCBI chr 3:60,747,323...60,845,831
Ensembl chr 3:60,747,323...60,845,830 		JBrowse link
G Cept1 choline/ethanolamine phosphotransferase 1 ISO SMPDB SMP:00479 NCBI chr 2:193,994,220...194,036,141
Ensembl chr 2:193,993,447...194,035,578 		JBrowse link
G Gnpat glyceronephosphate O-acyltransferase ISO SMPDB SMP:00479 NCBI chr19:52,822,326...52,848,872
Ensembl chr19:52,822,319...52,852,361 		JBrowse link
G Plpp1 phospholipid phosphatase 1 ISO SMPDB SMP:00479 NCBI chr 2:44,439,002...44,500,430
Ensembl chr 2:44,438,994...44,501,268 		JBrowse link
plasmalogen metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 ISO SMPDB SMP:00479 NCBI chr20:4,135,955...4,144,880
Ensembl chr20:4,135,957...4,145,278 		JBrowse link
G Agps alkylglycerone phosphate synthase ISO SMPDB SMP:00479 NCBI chr 3:60,747,323...60,845,831
Ensembl chr 3:60,747,323...60,845,830 		JBrowse link
G Cept1 choline/ethanolamine phosphotransferase 1 ISO SMPDB SMP:00479 NCBI chr 2:193,994,220...194,036,141
Ensembl chr 2:193,993,447...194,035,578 		JBrowse link
G Gnpat glyceronephosphate O-acyltransferase ISO SMPDB SMP:00479 NCBI chr19:52,822,326...52,848,872
Ensembl chr19:52,822,319...52,852,361 		JBrowse link
G Plpp1 phospholipid phosphatase 1 ISO SMPDB SMP:00479 NCBI chr 2:44,439,002...44,500,430
Ensembl chr 2:44,438,994...44,501,268 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6092
    classic metabolic pathway 1854
      lipid metabolic pathway 488
        glycerophospholipid metabolic pathway 106
          altered glycerophospholipid metabolic pathway + 0
          glycerophospholipid degradation pathway 0
          phosphatidylcholine metabolic pathway + 0
          phosphatidylglycerol metabolic pathway + 9
          phosphatidylinositol metabolic pathway + 23
          phosphatidylserine metabolic pathway 0
          plasmalogen metabolic pathway + 5
paths to the root