PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: O-linked glycan biosynthetic pathway
Accession: PW:0000194
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Definition: Those metabolic reactions involved in the synthesis of O-linked glycans. Sugars are serially added to a fully synthesized polypeptide chain. The initial step involves the transfer of N-acetylgalactosamine to the carboxy group of a serine or threonine. The location of the residue appears to be dictated by structure rather than amino acid signature.
Synonyms: related_synonym: KEGG:00512; KEGG:00514
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B3gnt6
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6
IEA
KEGG
rno:00512
NCBI chr 1:152,484,572...152,496,226
Ensembl chr 1:152,486,343...152,492,150
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B4galt1
beta-1,4-galactosyltransferase 1
IEA
KEGG
rno:00514
NCBI chr 5:55,935,614...55,982,461
Ensembl chr 5:55,935,615...55,982,461
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B4galt2
beta-1,4-galactosyltransferase 2
IEA
KEGG
rno:00514
NCBI chr 5:131,412,541...131,422,573
Ensembl chr 5:131,412,541...131,421,013
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B4galt3
beta-1,4-galactosyltransferase 3
IEA
KEGG
rno:00514
NCBI chr13:83,691,378...83,697,448
Ensembl chr13:83,691,446...83,697,448
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B4galt5
beta-1,4-galactosyltransferase 5
IEA
KEGG
rno:00512
NCBI chr 3:156,018,056...156,033,983
Ensembl chr 3:156,018,053...156,070,074
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C1galt1
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
IEA
KEGG
rno:00512
NCBI chr 4:35,930,981...35,966,100
Ensembl chr 4:35,928,104...35,961,831
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C1galt1c1
C1GALT1-specific chaperone 1
IEA
KEGG
rno:00512
NCBI chr X:117,378,123...117,382,620
Ensembl chr X:117,375,525...117,382,787
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Chst10
carbohydrate sulfotransferase 10
IEA
KEGG
rno:00514
NCBI chr 9:41,092,805...41,122,737
Ensembl chr 9:41,092,808...41,122,503
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Colgalt1
collagen beta(1-O)galactosyltransferase 1
IEA
KEGG
rno:00514
NCBI chr16:18,319,796...18,332,106
Ensembl chr16:18,319,795...18,332,106
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Colgalt2
collagen beta(1-O)galactosyltransferase 2
IEA
KEGG
rno:00514
NCBI chr13:64,523,641...64,628,295
Ensembl chr13:64,523,658...64,627,549
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Fut4
fucosyltransferase 4
IEA
KEGG
rno:00514
NCBI chr 8:11,586,721...11,590,682
Ensembl chr 8:11,586,721...11,590,682
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Fut7
fucosyltransferase 7
IEA
KEGG
rno:00514
NCBI chr 3:8,237,687...8,242,273
Ensembl chr 3:8,239,384...8,242,260
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Fut9
fucosyltransferase 9
IEA
KEGG
rno:00514
NCBI chr 5:39,351,815...39,565,256
Ensembl chr 5:39,351,819...39,565,130
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Galnt1
polypeptide N-acetylgalactosaminyltransferase 1
IEA
KEGG
rno:00512
NCBI chr18:15,489,015...15,568,849
Ensembl chr18:15,489,020...15,568,245
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Galnt10
polypeptide N-acetylgalactosaminyltransferase 10
IEA
KEGG
rno:00512
NCBI chr10:41,821,216...41,967,618
Ensembl chr10:41,820,158...41,967,013
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Galnt11
polypeptide N-acetylgalactosaminyltransferase 11
IEA
KEGG
rno:00512
NCBI chr 4:9,837,629...9,871,141
Ensembl chr 4:9,837,629...9,871,140
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Galnt12
polypeptide N-acetylgalactosaminyltransferase 12
IEA
KEGG
rno:00512
NCBI chr 5:61,384,575...61,413,346
Ensembl chr 5:61,384,571...61,413,354
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Galnt13
polypeptide N-acetylgalactosaminyltransferase 13
IEA
KEGG
rno:00512
NCBI chr 3:38,903,695...39,560,683
Ensembl chr 3:38,974,490...39,558,803
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Galnt14
polypeptide N-acetylgalactosaminyltransferase 14
IEA
KEGG
rno:00512
NCBI chr 6:21,756,039...21,977,533
Ensembl chr 6:21,755,195...21,972,192
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Galnt16
polypeptide N-acetylgalactosaminyltransferase 16
IEA
KEGG
rno:00512
NCBI chr 6:100,168,943...100,250,718
Ensembl chr 6:100,170,306...100,250,705
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Galnt17
polypeptide N-acetylgalactosaminyltransferase 17
IEA
KEGG
rno:00512
NCBI chr12:25,323,230...25,781,897
Ensembl chr12:25,322,701...25,781,290
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Galnt18
polypeptide N-acetylgalactosaminyltransferase 18
IEA
KEGG
rno:00512
NCBI chr 1:165,593,180...165,904,268
Ensembl chr 1:165,593,187...165,904,268
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Galnt2
polypeptide N-acetylgalactosaminyltransferase 2
IEA
KEGG
rno:00512
NCBI chr19:52,213,226...52,324,816
Ensembl chr19:52,213,351...52,324,813
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Galnt3
polypeptide N-acetylgalactosaminyltransferase 3
IEA
KEGG
rno:00512
NCBI chr 3:50,742,500...50,779,266
Ensembl chr 3:50,742,512...50,766,268
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Galnt4
polypeptide N-acetylgalactosaminyltransferase 4
IEA
KEGG
rno:00512
NCBI chr 7:33,925,229...33,927,770
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Galnt5
polypeptide N-acetylgalactosaminyltransferase 5
IEA
KEGG
rno:00512
NCBI chr 3:42,573,622...42,619,881
Ensembl chr 3:42,573,622...42,619,881
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Galnt6
polypeptide N-acetylgalactosaminyltransferase 6
IEA
KEGG
rno:00512
NCBI chr 7:131,789,836...131,828,077
Ensembl chr 7:131,789,839...131,819,661
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Galnt7
polypeptide N-acetylgalactosaminyltransferase 7
IEA
KEGG
rno:00512
NCBI chr16:32,578,643...32,703,189
Ensembl chr16:32,578,690...32,702,690
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Galntl5
polypeptide N-acetylgalactosaminyltransferase-like 5
IEA
KEGG
rno:00512
NCBI chr 4:9,873,426...9,923,297
Ensembl chr 4:9,873,428...9,923,136
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Galntl6
polypeptide N-acetylgalactosaminyltransferase-like 6
IEA
KEGG
rno:00512
NCBI chr16:31,192,880...32,443,979
Ensembl chr16:31,186,462...32,441,960
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Gcnt1
glucosaminyl (N-acetyl) transferase 1
IEA
KEGG
rno:00512
NCBI chr 1:214,718,344...214,755,735
Ensembl chr 1:214,718,293...214,758,776
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Gcnt3
glucosaminyl (N-acetyl) transferase 3, mucin type
IEA
KEGG
rno:00512
NCBI chr 8:70,689,173...70,696,476
Ensembl chr 8:70,686,844...70,699,562
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Lfng
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
IEA
KEGG
rno:00514
NCBI chr12:14,030,551...14,038,996
Ensembl chr12:14,018,333...14,039,008
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Mfng
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
IEA
KEGG
rno:00514
NCBI chr 7:110,310,810...110,328,653
Ensembl chr 7:110,310,812...110,328,653
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Mgat5b
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
IEA
KEGG
rno:00514
NCBI chr10:102,120,757...102,190,235
Ensembl chr10:102,120,445...102,190,233
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Ogt
O-linked N-acetylglucosamine (GlcNAc) transferase
IEA
KEGG
rno:00514
NCBI chr X:66,771,278...66,816,148
Ensembl chr X:66,771,349...66,816,146
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Plod3
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
IEA
KEGG
rno:00514
NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
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Pofut1
protein O-fucosyltransferase 1
IEA
KEGG
rno:00514
NCBI chr 3:141,708,618...141,735,558
Ensembl chr 3:141,708,644...141,734,786
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Pofut2
protein O-fucosyltransferase 2
IEA
KEGG
rno:00514
NCBI chr20:11,367,073...11,377,788
Ensembl chr20:11,367,096...11,377,743
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Pomgnt1
protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
IEA
KEGG
rno:00514
NCBI chr 5:129,634,274...129,644,150
Ensembl chr 5:129,634,294...129,644,149
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Pomt1
protein-O-mannosyltransferase 1
IEA
KEGG
rno:00514
NCBI chr 3:15,520,717...15,538,579
Ensembl chr 3:15,520,481...15,538,581
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Pomt2
protein-O-mannosyltransferase 2
IEA
KEGG
rno:00514
NCBI chr 6:106,755,462...106,794,849
Ensembl chr 6:106,755,462...106,794,849
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Rfng
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
IEA
KEGG
rno:00514
NCBI chr10:106,047,221...106,050,331
Ensembl chr10:106,047,221...106,050,345
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St3gal1
ST3 beta-galactoside alpha-2,3-sialyltransferase 1
IEA
KEGG
rno:00512
NCBI chr 7:98,845,270...98,913,409
Ensembl chr 7:98,845,270...98,913,236
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St3gal2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2
IEA
KEGG
rno:00512
NCBI chr19:38,888,851...38,939,874
Ensembl chr19:38,923,999...38,939,869
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St3gal3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3
IEA
KEGG
rno:00514
NCBI chr 5:131,470,348...131,670,794
Ensembl chr 5:131,470,348...131,670,810
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St6gal1
ST6 beta-galactoside alpha-2,6-sialyltransferase 1
IEA
KEGG
rno:00514
NCBI chr11:77,526,837...77,653,474
Ensembl chr11:77,526,837...77,653,310
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St6gal2
ST6 beta-galactoside alpha-2,6-sialyltransferase 2
IEA
KEGG
rno:00514
NCBI chr 9:9,181,744...9,274,161
Ensembl chr 9:9,182,399...9,269,697
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St6galnac1
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
IEA
KEGG
rno:00512
NCBI chr10:101,972,656...101,983,053
Ensembl chr10:101,972,668...101,983,053
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Ugt1a1
UDP glucuronosyltransferase family 1 member A1
IEA
KEGG
rno:00514
NCBI chr 9:88,801,344...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt1a2
UDP glucuronosyltransferase 1 family, polypeptide A2
IEA
KEGG
rno:00514
NCBI chr 9:88,791,216...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt1a3
UDP glycosyltransferase 1 family, polypeptide A3
IEA
KEGG
rno:00514
NCBI chr 9:88,780,328...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt1a5
UDP glucuronosyltransferase family 1 member A5
IEA
KEGG
rno:00514
NCBI chr 9:88,762,250...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt1a6
UDP glucuronosyltransferase family 1 member A6
IEA
KEGG
rno:00514
NCBI chr 9:88,747,213...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt1a7c
UDP glucuronosyltransferase 1 family, polypeptide A7C
IEA
KEGG
rno:00514
NCBI chr 9:88,739,577...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt1a8
UDP glucuronosyltransferase family 1 member A8
IEA
KEGG
rno:00514
NCBI chr 9:88,727,094...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt1a9
UDP glucuronosyltransferase family 1 member A9
IEA
KEGG
rno:00514
NCBI chr 9:88,696,981...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt2a1
UDP glucuronosyltransferase family 2 member A1
IEA
KEGG
rno:00514
NCBI chr14:20,521,018...20,545,934
Ensembl chr14:20,517,951...20,545,531
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Ugt2a3
UDP glucuronosyltransferase family 2 member A3
IEA
KEGG
rno:00514
NCBI chr14:20,572,793...20,590,795
Ensembl chr14:20,572,808...20,590,729
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Ugt2b
UDP glycosyltransferase 2 family, polypeptide B
IEA
KEGG
rno:00514
NCBI chr14:20,630,572...20,665,062
Ensembl chr14:20,630,250...20,651,776
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Ugt2b1
UDP glucuronosyltransferase 2 family, polypeptide B1
IEA
KEGG
rno:00514
NCBI chr14:21,024,035...21,035,784
Ensembl chr14:21,024,006...21,035,986
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Ugt2b37
UDP-glucuronosyltransferase 2 family, member 37
IEA
KEGG
rno:00514
NCBI chr14:20,817,285...20,833,917
Ensembl chr14:20,817,285...20,833,917
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