PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: retinol metabolic pathway
Accession: PW:0000141
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Definition: Those reactions involving retinol, a fat-soluble vitamin that is the dietary form of vitamin A and is important for bone growth and in vision. Precursors of retinol such as carotenoid or retinyl esters are derived from diet and are converted to retinal and retinol, respectively.
Synonyms: related_synonym: Retinoid metabolism and transport; retinol metabolic process
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ABCA1
ATP binding cassette subfamily A member 1
ISO
RGD
PMID:21718801
RGD:6484679
NCBI chr11:60,761,669...60,869,753
Ensembl chr11:60,761,655...60,890,496
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ALDH1A1
aldehyde dehydrogenase 1 family member A1
ISO
SMPDB
SMP:00074
NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789
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ALDH1A2
aldehyde dehydrogenase 1 family member A2
ISO
SMPDB RGD
PMID:12547725
RGD:1576367 SMP:00074
NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030
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AWAT1
acyl-CoA wax alcohol acyltransferase 1
ISO
SMPDB
SMP:00074
NCBI chr X:54,678,459...54,684,666
Ensembl chr X:54,622,317...54,684,231
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BCO1
beta-carotene oxygenase 1
ISO
SMPDB RGD
PMID:21569862 PMID:21718801
RGD:6484679 RGD:6903956 SMP:00074
NCBI chr 5:70,598,743...70,637,273
Ensembl chr 5:70,599,284...70,637,017
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CD36
CD36 molecule (CD36 blood group)
ISO
RGD
PMID:21718801
RGD:6484679
NCBI chr18:20,299,808...20,375,856
Ensembl chr18:20,339,050...20,372,639
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CPNE6
copine 6
ISO
SMPDB
SMP:00074
NCBI chr 8:4,046,532...4,058,498
Ensembl chr 8:4,046,544...4,084,744
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CYP26A1
cytochrome P450 family 26 subfamily A member 1
ISO
SMPDB
SMP:00074
NCBI chr28:7,423,955...7,432,359
Ensembl chr28:7,428,772...7,432,370
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CYP2A13
cytochrome P450 family 2 subfamily A polypeptide 13
ISO
SMPDB
SMP:00074
NCBI chr 1:112,932,246...112,938,248
Ensembl chr 1:112,931,985...112,938,350
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CYP2A7
cytochrome P450, family 2, subfamily A, polypeptide 7
ISO
SMPDB
SMP:00074
NCBI chr 1:112,900,508...112,906,745
Ensembl chr 1:112,900,403...112,907,076
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CYP2B6
cytochrome P450 2B11
ISO
SMPDB
SMP:00074
NCBI chr 1:112,817,561...112,833,294
Ensembl chr 1:112,816,502...112,833,293
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CYP3A4
cytochrome P450, family 3, subfamily A, polypeptide 4
ISO
SMPDB
SMP:00074
NCBI chr 6:9,836,685...9,869,520
Ensembl chr 6:9,777,659...9,869,352
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DGAT1
diacylglycerol O-acyltransferase 1
ISO
SMPDB
SMP:00074
NCBI chr13:37,745,395...37,761,337
Ensembl chr13:37,741,706...37,756,916
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DHRS3
dehydrogenase/reductase 3
ISO
SMPDB
SMP:00074
NCBI chr 2:83,826,361...83,865,412
Ensembl chr 2:83,826,374...83,865,426
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DHRS9
dehydrogenase/reductase 9
ISO
SMPDB
SMP:00074
NCBI chr36:13,859,935...13,881,432
Ensembl chr36:13,866,959...13,880,179
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DNAJB11
DnaJ heat shock protein family (Hsp40) member B11
ISO
SMPDB
SMP:00074
NCBI chr34:19,182,850...19,202,229
Ensembl chr34:19,182,400...19,202,238
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ERP29
endoplasmic reticulum protein 29
ISO
SMPDB
SMP:00074
NCBI chr26:9,608,352...9,616,711
Ensembl chr26:9,608,399...9,616,338
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HSP90B1
heat shock protein 90 beta family member 1
ISO
SMPDB
SMP:00074
NCBI chr15:42,456,793...42,474,122
Ensembl chr15:42,456,764...42,579,311
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HSPA5
heat shock protein family A (Hsp70) member 5
ISO
SMPDB
SMP:00074
NCBI chr 9:57,850,870...57,855,607
Ensembl chr 9:57,850,922...57,855,257
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HYOU1
hypoxia up-regulated 1
ISO
SMPDB
SMP:00074
NCBI chr 5:14,795,750...14,808,203
Ensembl chr 5:14,795,750...14,807,262
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LOC100856533
alcohol dehydrogenase E chain
ISO
SMPDB
SMP:00074
NCBI chr32:21,422,428...21,437,058
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LRAT
lecithin retinol acyltransferase
ISO
SMPDB RGD
PMID:21718801
RGD:6484679 SMP:00074
NCBI chr15:52,399,773...52,409,590
Ensembl chr15:52,399,544...52,406,176
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PDIA2
protein disulfide isomerase family A member 2
ISO
SMPDB
SMP:00074
NCBI chr 6:40,218,566...40,221,924
Ensembl chr 6:40,218,550...40,231,402
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PDIA4
protein disulfide isomerase family A member 4
ISO
SMPDB
SMP:00074
NCBI chr16:1,797,537...1,818,877
Ensembl chr16:1,797,552...1,818,251
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PDIA6
protein disulfide isomerase family A member 6
ISO
SMPDB
SMP:00074
NCBI chr17:7,653,834...7,674,136
Ensembl chr17:7,654,175...7,685,999
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PLB1
phospholipase B1
ISO
RGD
PMID:8117729 PMID:21718801
RGD:6484679 RGD:6903951
NCBI chr17:22,420,679...22,558,318
Ensembl chr17:22,440,651...22,557,737
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PNLIP
pancreatic lipase
ISO
RGD
PMID:21718801
RGD:6484679
NCBI chr28:27,139,028...27,156,457
Ensembl chr28:27,139,230...27,212,178
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PNLIPRP2
pancreatic lipase related protein 2
ISO
RGD
PMID:21718801
RGD:6484679
NCBI chr28:27,190,641...27,212,185
Ensembl chr28:27,139,230...27,212,178
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PNPLA4
patatin like phospholipase domain containing 4
ISO
SMPDB
SMP:00074
NCBI chr X:4,775,702...4,925,027
Ensembl chr X:4,874,240...4,924,976
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PPIB
peptidylprolyl isomerase B
ISO
SMPDB
SMP:00074
NCBI chr30:28,654,193...28,660,129
Ensembl chr30:28,654,200...28,788,801
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RBP2
retinol binding protein 2
ISO
RGD
PMID:21718801
RGD:6484679
NCBI chr23:35,619,215...35,642,249
Ensembl chr23:35,619,221...35,642,213
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RDH11
retinol dehydrogenase 11
ISO
SMPDB
SMP:00074
NCBI chr 8:41,651,970...41,669,661
Ensembl chr 8:41,614,921...41,669,576
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RDH12
retinol dehydrogenase 12
ISO
SMPDB
SMP:00074
NCBI chr 8:41,685,045...41,696,120
Ensembl chr 8:41,684,996...41,695,447
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RDH16
retinol dehydrogenase 16
ISO
SMPDB
SMP:00074
NCBI chr10:1,124,322...1,134,138
Ensembl chr10:1,124,320...1,130,453
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RDH8
retinol dehydrogenase 8
ISO
SMPDB
SMP:00074
NCBI chr20:51,029,633...51,035,910
Ensembl chr20:51,029,609...51,035,951
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RETSAT
retinol saturase
ISO
SMPDB
SMP:00074
NCBI chr17:39,668,185...39,682,166
Ensembl chr17:39,668,256...39,680,560
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RPE65
retinoid isomerohydrolase RPE65
ISO
SMPDB
SMP:00074
NCBI chr 6:76,887,399...76,911,133
Ensembl chr 6:76,887,399...76,911,131
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SCARB1
scavenger receptor class B member 1
ISO
RGD
PMID:21718801
RGD:6484679
NCBI chr26:5,035,797...5,122,383
Ensembl chr26:5,049,407...5,121,468
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SDF2L1
stromal cell derived factor 2 like 1
ISO
SMPDB
SMP:00074
NCBI chr26:30,918,788...30,920,873
Ensembl chr26:30,918,811...30,920,868
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all