PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: folate metabolic pathway
Accession: PW:0000140
browse the term
Definition: Folate metabolism represents the various aspects of the folate cycle and the folate-mediated transfer reactions essential for several biosynthetic pathways. The folate cycle and the folate-mediated one-carbon pathways are part of folate metabolism. Folate compounds are water-soluble forms of vitamin B9.
Synonyms: related_synonym: folic acid metabolic process; vitamin B9 metabolic pathway
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Akp3
alkaline phosphatase 3, intestine, not Mn requiring
IEA
KEGG
mmu:00790
NCBI chr 1:87,052,676...87,056,450
Ensembl chr 1:87,052,695...87,055,634
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Aldh1l1
aldehyde dehydrogenase 1 family, member L1
ISO
SMPDB
SMP:00053
NCBI chr 6:90,527,751...90,576,153
Ensembl chr 6:90,463,409...90,577,185
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Alpi
alkaline phosphatase, intestinal
IEA
KEGG
mmu:00790
NCBI chr 1:87,025,724...87,029,328
Ensembl chr 1:87,025,724...87,029,328
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Alpl
alkaline phosphatase, liver/bone/kidney
IEA
KEGG
mmu:00790
NCBI chr 4:137,469,042...137,523,695
Ensembl chr 4:137,469,044...137,523,695
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Alppl2
alkaline phosphatase, placental-like 2
IEA
KEGG
mmu:00790
NCBI chr 1:87,014,412...87,023,656
Ensembl chr 1:87,014,416...87,017,650
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Dhfr
dihydrofolate reductase
IEA ISO
KEGG SMPDB
SMP:00053 mmu:00790
NCBI chr13:92,491,291...92,525,561
Ensembl chr13:92,491,234...92,525,561
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Dmgdh
dimethylglycine dehydrogenase precursor
ISO
RGD
PMID:15358367
RGD:1547831
NCBI chr13:93,810,944...93,889,331
Ensembl chr13:93,810,941...93,889,341
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Folh1
folate hydrolase 1
ISO
RGD
PMID:9816319
RGD:151347637
NCBI chr 7:86,365,733...86,425,171
Ensembl chr 7:86,368,185...86,425,151
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Folr2
folate receptor beta
ISO
RGD
PMID:8445646
RGD:1540379
NCBI chr 7:101,489,195...101,506,397
Ensembl chr 7:101,489,195...101,506,401
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Fpgs
folylpolyglutamyl synthetase
IEA ISO
KEGG SMPDB
SMP:00053 mmu:00790
NCBI chr 2:32,572,621...32,594,163
Ensembl chr 2:32,572,621...32,594,157
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Ftcd
formiminotransferase cyclodeaminase
ISO
SMPDB
SMP:00053
NCBI chr10:76,411,482...76,426,172
Ensembl chr10:76,411,482...76,426,172
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Gart
phosphoribosylglycinamide formyltransferase
ISO
RGD
PMID:12450384
RGD:1547842
NCBI chr16:91,418,283...91,444,505
Ensembl chr16:91,418,074...91,443,840
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Gch1
GTP cyclohydrolase 1
IEA
KEGG
mmu:00790
NCBI chr14:47,391,352...47,426,870
Ensembl chr14:47,391,352...47,426,870
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Ggh
gamma-glutamyl hydrolase
IEA ISO
KEGG SMPDB
SMP:00053 mmu:00790
NCBI chr 4:20,041,963...20,066,111
Ensembl chr 4:20,042,052...20,066,750
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Gnmt
glycine N-methyltransferase
ISO
RGD
PMID:15347642
RGD:1359070
NCBI chr17:47,036,590...47,040,091
Ensembl chr17:47,036,590...47,040,094
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Mocs1
molybdenum cofactor synthesis 1
IEA
KEGG
mmu:00790
NCBI chr17:49,735,378...49,762,463
Ensembl chr17:49,735,390...49,762,463
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Mocs2
molybdenum cofactor synthesis 2
IEA
KEGG
mmu:00790
NCBI chr13:114,954,707...114,965,960
Ensembl chr13:114,954,772...114,968,811
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Mtfmt
mitochondrial methionyl-tRNA formyltransferase
ISO
SMPDB
SMP:00053
NCBI chr 9:65,343,064...65,360,336
Ensembl chr 9:65,343,064...65,360,336
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Mthfd1
methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
ISO
SMPDB
SMP:00053
NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577
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Mthfd1l
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
ISO
SMPDB
SMP:00053
NCBI chr10:3,918,282...4,117,081
Ensembl chr10:3,923,118...4,117,081
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Mthfd2
methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
ISO
SMPDB
SMP:00053
NCBI chr 6:83,282,686...83,302,926
Ensembl chr 6:83,282,673...83,302,890
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Mthfr
methylenetetrahydrofolate reductase
ISO
SMPDB
SMP:00053
NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008
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Mthfs
5, 10-methenyltetrahydrofolate synthetase
ISO
SMPDB
SMP:00053
NCBI chr 9:89,093,243...89,122,278
Ensembl chr 9:89,092,729...89,259,766
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Mtr
5-methyltetrahydrofolate-homocysteine methyltransferase
ISO
RGD
PMID:15845641
RGD:1359026
NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999
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Mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase
ISO
RGD
PMID:15979034
RGD:1359037
NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268
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Pts
6-pyruvoyl-tetrahydropterin synthase
IEA
KEGG
mmu:00790
NCBI chr 9:50,432,917...50,440,017
Ensembl chr 9:50,432,917...50,440,024
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Qdpr
quinoid dihydropteridine reductase
IEA
KEGG
mmu:00790
NCBI chr 5:45,591,374...45,607,571
Ensembl chr 5:45,591,363...45,607,578
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Shmt1
serine hydroxymethyltransferase 1 (soluble)
ISO
RGD
PMID:15671219
RGD:1359815
NCBI chr11:60,679,723...60,702,062
Ensembl chr11:60,678,930...60,702,544
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Shmt2
serine hydroxymethyltransferase 2 (mitochondrial)
ISO
RGD
PMID:15671219
RGD:1359815
NCBI chr10:127,352,992...127,358,313
Ensembl chr10:127,352,992...127,358,313
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Slc19a1
solute carrier family 19 (folate transporter), member 1
ISO
RGD
PMID:11600421
RGD:735239
NCBI chr10:76,868,103...76,886,266
Ensembl chr10:76,868,075...76,896,836
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Slc46a1
solute carrier family 46, member 1
ISO
SMPDB
SMP:00053
NCBI chr11:78,356,527...78,362,771
Ensembl chr11:78,356,523...78,362,885
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Spr
sepiapterin reductase
IEA
KEGG
mmu:00790
NCBI chr 6:85,110,662...85,114,746
Ensembl chr 6:85,107,158...85,114,748
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Tyms
thymidylate synthase
ISO
RGD
PMID:9894005
RGD:1545055
NCBI chr 5:30,243,544...30,279,261
Ensembl chr 5:30,263,200...30,278,615
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Aldh1l1
aldehyde dehydrogenase 1 family, member L1
ISO
RGD
PMID:22353665
RGD:7242562
NCBI chr 6:90,527,751...90,576,153
Ensembl chr 6:90,463,409...90,577,185
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Dhfr
dihydrofolate reductase
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr13:92,491,291...92,525,561
Ensembl chr13:92,491,234...92,525,561
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Folr1
folate receptor alpha
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr 7:101,507,551...101,519,974
Ensembl chr 7:101,507,538...101,519,995
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Mthfd1
methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577
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Mthfr
methylenetetrahydrofolate reductase
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008
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Mtr
5-methyltetrahydrofolate-homocysteine methyltransferase
ISO
RGD
PMID:22108709 PMID:22108709
RGD:7242557 , RGD:7242557
NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999
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Mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268
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Slc46a1
solute carrier family 46, member 1
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr11:78,356,527...78,362,771
Ensembl chr11:78,356,523...78,362,885
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Mthfd1
methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
ISO
RGD
PMID:22353665
RGD:7242562
NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577
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Mthfr
methylenetetrahydrofolate reductase
ISO
RGD
PMID:22353665
RGD:7242562
NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008
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Mtr
5-methyltetrahydrofolate-homocysteine methyltransferase
ISO
RGD
PMID:22353665
RGD:7242562
NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999
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Aldh1l1
aldehyde dehydrogenase 1 family, member L1
ISO
RGD
PMID:22353665
RGD:7242562
NCBI chr 6:90,527,751...90,576,153
Ensembl chr 6:90,463,409...90,577,185
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Amt
aminomethyltransferase
ISO
RGD
PMID:20645850
RGD:7242560
NCBI chr 9:108,174,104...108,179,501
Ensembl chr 9:108,174,052...108,179,501
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Dhfr
dihydrofolate reductase
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr13:92,491,291...92,525,561
Ensembl chr13:92,491,234...92,525,561
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Dld
dihydrolipoamide dehydrogenase
ISO
RGD
PMID:20645850
RGD:7242560
NCBI chr12:31,381,561...31,401,470
Ensembl chr12:31,381,276...31,401,452
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Dmgdh
dimethylglycine dehydrogenase precursor
ISO
RGD
PMID:20645850
RGD:7242560
NCBI chr13:93,810,944...93,889,331
Ensembl chr13:93,810,941...93,889,341
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Folh1
folate hydrolase 1
ISO
RGD
PMID:20814827 PMID:16859665
RGD:7242426 , RGD:7242559
NCBI chr 7:86,365,733...86,425,171
Ensembl chr 7:86,368,185...86,425,151
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Folr1
folate receptor alpha
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr 7:101,507,551...101,519,974
Ensembl chr 7:101,507,538...101,519,995
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Folr2
folate receptor beta
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr 7:101,489,195...101,506,397
Ensembl chr 7:101,489,195...101,506,401
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Fpgs
folylpolyglutamyl synthetase
ISO
RGD
PMID:16859665
RGD:7242559
NCBI chr 2:32,572,621...32,594,163
Ensembl chr 2:32,572,621...32,594,157
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Gcsh
glycine cleavage system protein H (aminomethyl carrier)
ISO
RGD
PMID:20645850
RGD:7242560
NCBI chr 8:117,708,706...117,720,237
Ensembl chr 8:117,708,549...117,720,276
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Ggh
gamma-glutamyl hydrolase
ISO
RGD
PMID:16859665
RGD:7242559
NCBI chr 4:20,041,963...20,066,111
Ensembl chr 4:20,042,052...20,066,750
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Gldc
glycine decarboxylase
ISO
RGD
PMID:20645850
RGD:7242560
NCBI chr19:30,075,847...30,152,829
Ensembl chr19:30,075,847...30,152,829
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Mthfd1
methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577
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Mthfd1l
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr10:3,918,282...4,117,081
Ensembl chr10:3,923,118...4,117,081
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Mthfd2
methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
ISO
RGD
PMID:20645850 PMID:22108709
RGD:7242560 , RGD:7242557
NCBI chr 6:83,282,686...83,302,926
Ensembl chr 6:83,282,673...83,302,890
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Mthfd2l
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr 5:91,078,704...91,169,227
Ensembl chr 5:91,078,976...91,169,227
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Mthfr
methylenetetrahydrofolate reductase
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008
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Mtr
5-methyltetrahydrofolate-homocysteine methyltransferase
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999
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Mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268
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Sardh
sarcosine dehydrogenase
ISO
RGD
PMID:20645850
RGD:7242560
NCBI chr 2:27,078,405...27,138,344
Ensembl chr 2:27,078,405...27,138,349
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Shmt1
serine hydroxymethyltransferase 1 (soluble)
ISO
RGD
PMID:22108709
RGD:7242557
NCBI chr11:60,679,723...60,702,062
Ensembl chr11:60,678,930...60,702,544
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Shmt2
serine hydroxymethyltransferase 2 (mitochondrial)
ISO
RGD
PMID:20645850 PMID:22108709
RGD:7242560 , RGD:7242557
NCBI chr10:127,352,992...127,358,313
Ensembl chr10:127,352,992...127,358,313
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Slc19a1
solute carrier family 19 (folate transporter), member 1
ISO
RGD
PMID:22108709 PMID:20814827
RGD:7242557 , RGD:7242426
NCBI chr10:76,868,103...76,886,266
Ensembl chr10:76,868,075...76,896,836
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Slc25a32
solute carrier family 25, member 32
ISO
RGD
PMID:22332074
RGD:7242561
NCBI chr15:38,954,625...38,976,213
Ensembl chr15:38,954,626...38,976,111
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Slc46a1
solute carrier family 46, member 1
ISO
RGD
PMID:22108709 PMID:20814827
RGD:7242557 , RGD:7242426
NCBI chr11:78,356,527...78,362,771
Ensembl chr11:78,356,523...78,362,885
G
Aldh1l1
aldehyde dehydrogenase 1 family, member L1
IEA
KEGG
mmu:00670
NCBI chr 6:90,527,751...90,576,153
Ensembl chr 6:90,463,409...90,577,185
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Aldh1l2
aldehyde dehydrogenase 1 family, member L2
IEA
KEGG
mmu:00670
NCBI chr10:83,320,386...83,370,008
Ensembl chr10:83,323,314...83,370,004
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Amt
aminomethyltransferase
IEA
KEGG
mmu:00670
NCBI chr 9:108,174,104...108,179,501
Ensembl chr 9:108,174,052...108,179,501
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Atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
IEA ISO
KEGG RGD
PMID:9332377 PMID:22332074
mmu:00670, RGD:70804 , RGD:7242561
NCBI chr 1:71,596,315...71,618,562
Ensembl chr 1:71,596,309...71,618,790
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Dhfr
dihydrofolate reductase
IEA ISO
KEGG RGD
PMID:22332074
mmu:00670, RGD:7242561
NCBI chr13:92,491,291...92,525,561
Ensembl chr13:92,491,234...92,525,561
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Dmgdh
dimethylglycine dehydrogenase precursor
ISO
RGD
PMID:15358367
RGD:1547831
NCBI chr13:93,810,944...93,889,331
Ensembl chr13:93,810,941...93,889,341
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Folh1
folate hydrolase 1
ISO
RGD
PMID:9501243
RGD:728645
NCBI chr 7:86,365,733...86,425,171
Ensembl chr 7:86,368,185...86,425,151
G
Ftcd
formiminotransferase cyclodeaminase
IEA
KEGG
mmu:00670
NCBI chr10:76,411,482...76,426,172
Ensembl chr10:76,411,482...76,426,172
G
Gart
phosphoribosylglycinamide formyltransferase
IEA ISO
KEGG RGD
PMID:22332074
mmu:00670, RGD:7242561
NCBI chr16:91,418,283...91,444,505
Ensembl chr16:91,418,074...91,443,840
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Gnmt
glycine N-methyltransferase
ISO
RGD
PMID:8278367
RGD:1545057
NCBI chr17:47,036,590...47,040,091
Ensembl chr17:47,036,590...47,040,094
G
Mtfmt
mitochondrial methionyl-tRNA formyltransferase
IEA
KEGG
mmu:00670
NCBI chr 9:65,343,064...65,360,336
Ensembl chr 9:65,343,064...65,360,336
G
Mthfd1
methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
IEA ISO
KEGG RGD
PMID:22332074
mmu:00670, RGD:7242561
NCBI chr12:76,301,180...76,366,594
Ensembl chr12:76,302,072...76,366,577
G
Mthfd1l
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
IEA
KEGG
mmu:00670
NCBI chr10:3,918,282...4,117,081
Ensembl chr10:3,923,118...4,117,081
G
Mthfd2
methylenetetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase
IEA
KEGG
mmu:00670
NCBI chr 6:83,282,686...83,302,926
Ensembl chr 6:83,282,673...83,302,890
G
Mthfd2l
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like
IEA
KEGG
mmu:00670
NCBI chr 5:91,078,704...91,169,227
Ensembl chr 5:91,078,976...91,169,227
G
Mthfr
methylenetetrahydrofolate reductase
IEA ISO
KEGG RGD
PMID:22332074
mmu:00670, RGD:7242561
NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008
G
Mthfs
5, 10-methenyltetrahydrofolate synthetase
IEA
KEGG
mmu:00670
NCBI chr 9:89,093,243...89,122,278
Ensembl chr 9:89,092,729...89,259,766
G
Mthfsl
5, 10-methenyltetrahydrofolate synthetase-like
IEA
KEGG
mmu:00670
NCBI chr 9:88,567,696...88,602,381
Ensembl chr 9:88,570,655...88,602,349
G
Mtr
5-methyltetrahydrofolate-homocysteine methyltransferase
IEA ISO
KEGG RGD
PMID:20814827
mmu:00670, RGD:7242426
NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999
G
Mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase
ISO
RGD
PMID:20814827
RGD:7242426
NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268
G
Shmt1
serine hydroxymethyltransferase 1 (soluble)
ISO IEA
KEGG RGD
PMID:3110140 PMID:22332074
mmu:00670, RGD:2300383 , RGD:7242561
NCBI chr11:60,679,723...60,702,062
Ensembl chr11:60,678,930...60,702,544
G
Shmt2
serine hydroxymethyltransferase 2 (mitochondrial)
ISO IEA
KEGG RGD
PMID:3110140 PMID:22332074
mmu:00670, RGD:2300383 , RGD:7242561
NCBI chr10:127,352,992...127,358,313
Ensembl chr10:127,352,992...127,358,313
G
Tyms
thymidylate synthase
IEA ISO
KEGG RGD
PMID:22332074
mmu:00670, RGD:7242561
NCBI chr 5:30,243,544...30,279,261
Ensembl chr 5:30,263,200...30,278,615
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all