PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: folate metabolic pathway
Accession: PW:0000140
browse the term
Definition: Folate metabolism represents the various aspects of the folate cycle and the folate-mediated transfer reactions essential for several biosynthetic pathways. The folate cycle and the folate-mediated one-carbon pathways are part of folate metabolism. Folate compounds are water-soluble forms of vitamin B9.
Synonyms: related_synonym: folic acid metabolic process; vitamin B9 metabolic pathway
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ALDH1L1
aldehyde dehydrogenase 1 family member L1
EXP
SMPDB
SMP:00053
NCBI chr 3:126,103,570...126,197,945
Ensembl chr 3:126,103,562...126,197,994
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ALPG
alkaline phosphatase, germ cell
IEA
KEGG
hsa:00790
NCBI chr 2:232,406,844...232,410,714
Ensembl chr 2:232,406,844...232,410,714
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ALPI
alkaline phosphatase, intestinal
IEA
KEGG
hsa:00790
NCBI chr 2:232,456,153...232,460,753
Ensembl chr 2:232,456,125...232,460,753
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ALPL
alkaline phosphatase, biomineralization associated
IEA
KEGG
hsa:00790
NCBI chr 1:21,508,984...21,578,410
Ensembl chr 1:21,509,397...21,578,410
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ALPP
alkaline phosphatase, placental
IEA
KEGG
hsa:00790
NCBI chr 2:232,378,751...232,382,889
Ensembl chr 2:232,378,724...232,382,889
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DHFR
dihydrofolate reductase
ISS EXP IEA
SMPDB KEGG RGD
PMID:11502523
SMP:00053 hsa:00790, RGD:1298877
NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983
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DMGDH
dimethylglycine dehydrogenase
ISS
RGD
PMID:15358367
RGD:1547831
NCBI chr 5:78,997,564...79,069,674
Ensembl chr 5:78,997,564...79,236,038
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FOLH1
folate hydrolase 1
IDA
RGD
PMID:9816319
RGD:151347637
NCBI chr11:49,145,092...49,208,602
Ensembl chr11:49,145,092...49,208,638
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FOLR2
folate receptor beta
TAS
RGD
PMID:8445646
RGD:1540379
NCBI chr11:72,216,794...72,221,950
Ensembl chr11:72,216,601...72,221,950
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FPGS
folylpolyglutamate synthase
IEA EXP
KEGG SMPDB
SMP:00053 hsa:00790
NCBI chr 9:127,802,858...127,814,506
Ensembl chr 9:127,794,597...127,814,327
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FTCD
formimidoyltransferase cyclodeaminase
EXP
SMPDB
SMP:00053
NCBI chr21:46,136,262...46,155,579
Ensembl chr21:46,136,160...46,155,579
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GART
phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
IDA
RGD
PMID:12450384
RGD:1547842
NCBI chr21:33,503,931...33,542,893
Ensembl chr21:33,503,931...33,543,491
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GCH1
GTP cyclohydrolase 1
IEA
KEGG
hsa:00790
NCBI chr14:54,842,017...54,902,826
Ensembl chr14:54,842,008...54,902,826
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GGH
gamma-glutamyl hydrolase
IEA EXP
KEGG SMPDB
SMP:00053 hsa:00790
NCBI chr 8:63,015,079...63,038,806
Ensembl chr 8:63,014,881...63,039,407
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GNMT
glycine N-methyltransferase
ISO
RGD
PMID:15347642
RGD:1359070
NCBI chr 6:42,960,754...42,963,880
Ensembl chr 6:42,960,754...42,963,880
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MOCS1
molybdenum cofactor synthesis 1
IEA
KEGG
hsa:00790
NCBI chr 6:39,904,170...39,934,462
Ensembl chr 6:39,899,578...39,934,551
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MOCS2
molybdenum cofactor synthesis 2
IEA
KEGG
hsa:00790
NCBI chr 5:53,095,679...53,109,757
Ensembl chr 5:53,095,679...53,110,063
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MTFMT
mitochondrial methionyl-tRNA formyltransferase
EXP
SMPDB
SMP:00053
NCBI chr15:65,001,512...65,029,639
Ensembl chr15:65,001,512...65,029,639
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MTHFD1
methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1
ISS EXP
SMPDB RGD
PMID:2186031
SMP:00053, RGD:1299513
NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457
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MTHFD1L
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like
EXP
SMPDB
SMP:00053
NCBI chr 6:150,865,702...151,101,887
Ensembl chr 6:150,865,679...151,101,887
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MTHFD2
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
TAS EXP
SMPDB RGD
PMID:9454603
SMP:00053, RGD:1540378
NCBI chr 2:74,198,615...74,217,565
Ensembl chr 2:74,186,172...74,217,565
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MTHFR
methylenetetrahydrofolate reductase
TAS EXP
SMPDB RGD
PMID:11933257
SMP:00053, RGD:1535021
NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455
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MTHFS
methenyltetrahydrofolate synthetase
EXP
SMPDB
SMP:00053
NCBI chr15:79,843,547...79,897,285
Ensembl chr15:79,833,585...79,897,379
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MTR
5-methyltetrahydrofolate-homocysteine methyltransferase
ISS
RGD
PMID:15845641
RGD:1359026
NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278
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MTRR
5-methyltetrahydrofolate-homocysteine methyltransferase reductase
TAS
RGD
PMID:15979034
RGD:1359037
NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025
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PTS
6-pyruvoyltetrahydropterin synthase
IEA
KEGG
hsa:00790
NCBI chr11:112,226,428...112,233,973
Ensembl chr11:112,226,367...112,269,955
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QDPR
quinoid dihydropteridine reductase
IEA
KEGG
hsa:00790
NCBI chr 4:17,486,395...17,512,090
Ensembl chr 4:17,460,261...17,512,206
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SHMT1
serine hydroxymethyltransferase 1
TAS
RGD
PMID:15671219
RGD:1359815
NCBI chr17:18,327,873...18,363,550
Ensembl chr17:18,327,873...18,363,550
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SHMT2
serine hydroxymethyltransferase 2
TAS
RGD
PMID:15671219
RGD:1359815
NCBI chr12:57,229,711...57,234,935
Ensembl chr12:57,229,573...57,234,935
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SLC19A1
solute carrier family 19 member 1
ISS
RGD
PMID:11600421
RGD:735239
NCBI chr21:45,502,517...45,563,025
Ensembl chr21:45,493,572...45,573,365
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SLC46A1
solute carrier family 46 member 1
EXP
SMPDB
SMP:00053
NCBI chr17:28,394,642...28,406,592
Ensembl chr17:28,394,642...28,407,197
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SPR
sepiapterin reductase
IEA
KEGG
hsa:00790
NCBI chr 2:72,887,408...72,892,158
Ensembl chr 2:72,887,382...72,892,158
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TYMS
thymidylate synthetase
ISS
RGD
PMID:9894005
RGD:1545055
NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
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ALDH1L1
aldehyde dehydrogenase 1 family member L1
TAS
RGD
PMID:22353665
RGD:7242562
NCBI chr 3:126,103,570...126,197,945
Ensembl chr 3:126,103,562...126,197,994
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DHFR
dihydrofolate reductase
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983
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FOLR1
folate receptor alpha
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323
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MTHFD1
methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457
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MTHFR
methylenetetrahydrofolate reductase
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455
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MTR
5-methyltetrahydrofolate-homocysteine methyltransferase
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278
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MTRR
5-methyltetrahydrofolate-homocysteine methyltransferase reductase
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025
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SLC46A1
solute carrier family 46 member 1
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr17:28,394,642...28,406,592
Ensembl chr17:28,394,642...28,407,197
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MTHFD1
methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1
TAS
RGD
PMID:22353665
RGD:7242562
NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457
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MTHFR
methylenetetrahydrofolate reductase
TAS
RGD
PMID:22353665
RGD:7242562
NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455
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MTR
5-methyltetrahydrofolate-homocysteine methyltransferase
TAS
RGD
PMID:22353665
RGD:7242562
NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278
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ALDH1L1
aldehyde dehydrogenase 1 family member L1
TAS
RGD
PMID:22353665
RGD:7242562
NCBI chr 3:126,103,570...126,197,945
Ensembl chr 3:126,103,562...126,197,994
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AMT
aminomethyltransferase
TAS
RGD
PMID:20645850
RGD:7242560
NCBI chr 3:49,416,778...49,422,473
Ensembl chr 3:49,416,778...49,422,685
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DHFR
dihydrofolate reductase
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983
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DLD
dihydrolipoamide dehydrogenase
TAS
RGD
PMID:20645850
RGD:7242560
NCBI chr 7:107,891,107...107,921,198
Ensembl chr 7:107,891,162...107,931,730
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DMGDH
dimethylglycine dehydrogenase
TAS
RGD
PMID:20645850
RGD:7242560
NCBI chr 5:78,997,564...79,069,674
Ensembl chr 5:78,997,564...79,236,038
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FOLH1
folate hydrolase 1
TAS
RGD
PMID:20814827 PMID:16859665
RGD:7242426 , RGD:7242559
NCBI chr11:49,145,092...49,208,602
Ensembl chr11:49,145,092...49,208,638
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FOLR1
folate receptor alpha
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr11:72,189,709...72,196,323
Ensembl chr11:72,189,558...72,196,323
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FOLR2
folate receptor beta
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr11:72,216,794...72,221,950
Ensembl chr11:72,216,601...72,221,950
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FPGS
folylpolyglutamate synthase
TAS
RGD
PMID:16859665
RGD:7242559
NCBI chr 9:127,802,858...127,814,506
Ensembl chr 9:127,794,597...127,814,327
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GCSH
glycine cleavage system protein H
TAS
RGD
PMID:20645850
RGD:7242560
NCBI chr16:81,081,945...81,096,395
Ensembl chr16:81,081,945...81,096,395
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GGH
gamma-glutamyl hydrolase
TAS
RGD
PMID:16859665
RGD:7242559
NCBI chr 8:63,015,079...63,038,806
Ensembl chr 8:63,014,881...63,039,407
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GLDC
glycine decarboxylase
TAS
RGD
PMID:20645850
RGD:7242560
NCBI chr 9:6,532,467...6,645,729
Ensembl chr 9:6,532,467...6,645,729
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MTHFD1
methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457
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MTHFD1L
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr 6:150,865,702...151,101,887
Ensembl chr 6:150,865,679...151,101,887
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MTHFD2
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
TAS
RGD
PMID:20645850 PMID:22108709
RGD:7242560 , RGD:7242557
NCBI chr 2:74,198,615...74,217,565
Ensembl chr 2:74,186,172...74,217,565
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MTHFD2L
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr 4:74,114,560...74,303,099
Ensembl chr 4:74,114,174...74,303,099
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MTHFR
methylenetetrahydrofolate reductase
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455
G
MTR
5-methyltetrahydrofolate-homocysteine methyltransferase
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278
G
MTRR
5-methyltetrahydrofolate-homocysteine methyltransferase reductase
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025
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SARDH
sarcosine dehydrogenase
TAS
RGD
PMID:20645850
RGD:7242560
NCBI chr 9:133,659,418...133,739,955
Ensembl chr 9:133,663,560...133,739,955
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SHMT1
serine hydroxymethyltransferase 1
TAS
RGD
PMID:22108709
RGD:7242557
NCBI chr17:18,327,873...18,363,550
Ensembl chr17:18,327,873...18,363,550
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SHMT2
serine hydroxymethyltransferase 2
TAS
RGD
PMID:20645850 PMID:22108709
RGD:7242560 , RGD:7242557
NCBI chr12:57,229,711...57,234,935
Ensembl chr12:57,229,573...57,234,935
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SLC19A1
solute carrier family 19 member 1
TAS
RGD
PMID:22108709 PMID:20814827
RGD:7242557 , RGD:7242426
NCBI chr21:45,502,517...45,563,025
Ensembl chr21:45,493,572...45,573,365
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SLC25A32
solute carrier family 25 member 32
TAS
RGD
PMID:22332074
RGD:7242561
NCBI chr 8:103,398,638...103,415,107
Ensembl chr 8:103,398,635...103,415,189
G
SLC46A1
solute carrier family 46 member 1
TAS
RGD
PMID:22108709 PMID:20814827
RGD:7242557 , RGD:7242426
NCBI chr17:28,394,642...28,406,592
Ensembl chr17:28,394,642...28,407,197
G
ALDH1L1
aldehyde dehydrogenase 1 family member L1
IEA
KEGG
hsa:00670
NCBI chr 3:126,103,570...126,197,945
Ensembl chr 3:126,103,562...126,197,994
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ALDH1L2
aldehyde dehydrogenase 1 family member L2
IEA
KEGG
hsa:00670
NCBI chr12:105,019,790...105,084,458
Ensembl chr12:105,019,784...105,107,643
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AMT
aminomethyltransferase
IEA
KEGG
hsa:00670
NCBI chr 3:49,416,778...49,422,473
Ensembl chr 3:49,416,778...49,422,685
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ATIC
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
IEA ISO TAS
KEGG RGD
PMID:9332377 PMID:22332074
hsa:00670, RGD:70804 , RGD:7242561
NCBI chr 2:215,312,059...215,368,592
Ensembl chr 2:215,311,956...215,349,773
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DHFR
dihydrofolate reductase
ISS TAS IEA
KEGG RGD
PMID:11502523 PMID:22332074
hsa:00670, RGD:1298877 , RGD:7242561
NCBI chr 5:80,626,226...80,654,983
Ensembl chr 5:80,626,226...80,654,983
G
DMGDH
dimethylglycine dehydrogenase
ISS
RGD
PMID:15358367
RGD:1547831
NCBI chr 5:78,997,564...79,069,674
Ensembl chr 5:78,997,564...79,236,038
G
FOLH1
folate hydrolase 1
ISS
RGD
PMID:9501243
RGD:728645
NCBI chr11:49,145,092...49,208,602
Ensembl chr11:49,145,092...49,208,638
G
FTCD
formimidoyltransferase cyclodeaminase
IEA
KEGG
hsa:00670
NCBI chr21:46,136,262...46,155,579
Ensembl chr21:46,136,160...46,155,579
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GART
phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
IDA TAS IEA
KEGG RGD
PMID:12450384 PMID:22332074
hsa:00670, RGD:1547842 , RGD:7242561
NCBI chr21:33,503,931...33,542,893
Ensembl chr21:33,503,931...33,543,491
G
GNMT
glycine N-methyltransferase
ISO
RGD
PMID:8278367
RGD:1545057
NCBI chr 6:42,960,754...42,963,880
Ensembl chr 6:42,960,754...42,963,880
G
MTFMT
mitochondrial methionyl-tRNA formyltransferase
IEA
KEGG
hsa:00670
NCBI chr15:65,001,512...65,029,639
Ensembl chr15:65,001,512...65,029,639
G
MTHFD1
methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1
IEA TAS ISS
KEGG RGD
PMID:22332074 PMID:2186031
hsa:00670, RGD:7242561 , RGD:1299513
NCBI chr14:64,388,353...64,460,025
Ensembl chr14:64,388,031...64,463,457
G
MTHFD1L
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like
IEA
KEGG
hsa:00670
NCBI chr 6:150,865,702...151,101,887
Ensembl chr 6:150,865,679...151,101,887
G
MTHFD2
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
TAS IEA
KEGG RGD
PMID:9454603
hsa:00670, RGD:1540378
NCBI chr 2:74,198,615...74,217,565
Ensembl chr 2:74,186,172...74,217,565
G
MTHFD2L
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like
IEA
KEGG
hsa:00670
NCBI chr 4:74,114,560...74,303,099
Ensembl chr 4:74,114,174...74,303,099
G
MTHFR
methylenetetrahydrofolate reductase
TAS IEA
KEGG RGD
PMID:11933257 PMID:22332074
hsa:00670, RGD:1535021 , RGD:7242561
NCBI chr 1:11,785,723...11,805,964
Ensembl chr 1:11,785,723...11,806,455
G
MTHFS
methenyltetrahydrofolate synthetase
IEA
KEGG
hsa:00670
NCBI chr15:79,843,547...79,897,285
Ensembl chr15:79,833,585...79,897,379
G
MTR
5-methyltetrahydrofolate-homocysteine methyltransferase
IEA TAS ISS
KEGG RGD
PMID:20814827 PMID:15845641
hsa:00670, RGD:7242426 , RGD:1359026
NCBI chr 1:236,795,281...236,903,981
Ensembl chr 1:236,795,260...236,921,278
G
MTRR
5-methyltetrahydrofolate-homocysteine methyltransferase reductase
TAS
RGD
PMID:20814827
RGD:7242426
NCBI chr 5:7,850,859...7,901,113
Ensembl chr 5:7,851,186...7,906,025
G
SHMT1
serine hydroxymethyltransferase 1
TAS IEA ISO
KEGG RGD
PMID:15671219 PMID:22332074 PMID:3110140
hsa:00670, RGD:1359815 , RGD:7242561 , RGD:2300383
NCBI chr17:18,327,873...18,363,550
Ensembl chr17:18,327,873...18,363,550
G
SHMT2
serine hydroxymethyltransferase 2
TAS IEA ISO
KEGG RGD
PMID:15671219 PMID:22332074 PMID:3110140
hsa:00670, RGD:1359815 , RGD:7242561 , RGD:2300383
NCBI chr12:57,229,711...57,234,935
Ensembl chr12:57,229,573...57,234,935
G
TYMS
thymidylate synthetase
IEA TAS ISS
KEGG RGD
PMID:22332074 PMID:9894005
hsa:00670, RGD:7242561 , RGD:1545055
NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
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