vitamin B6 metabolic pathway - Ontology Report - Rat Genome Database

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PATHWAY ONTOLOGY - ANNOTATIONS	{{ watchLinkText }}
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:	vitamin B6 metabolic pathway	go back to main search page
Accession:	PW:0000138	browse the term
Definition:	Those metabolic reactions involving vitamin B6 - a water-soluble vitamin that exists in several forms. Vitamin B6 is required for many enzymatic reactions as the active pyridoxal 5'-phosphate (PLP) form. A number of organisms can carry out de novo synthesis of vitamin B6; humans derive it from diet.
Synonyms:	related_synonym:	pyridoxine metabolic pathway; vitamin B6 metabolic process

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Genes (9)

vitamin B6 metabolic pathway

term browser

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

alkaline phosphatase, biomineralization associated

SMP:00017

NCBI chr 5:149,951,397...150,006,424
Ensembl chr 5:149,951,409...150,006,446

G

aldehyde oxidase 1

SMP:00017 rno:00750

NCBI chr 9:59,579,621...59,658,772
Ensembl chr 9:59,579,649...59,658,770

G

aldehyde oxidase 2

rno:00750

NCBI chr 9:59,828,403...59,916,175
Ensembl chr 9:59,828,084...59,916,146

G

pyridoxal kinase

SMP:00017 rno:00750

NCBI chr20:10,210,276...10,232,314
Ensembl chr20:10,210,289...10,232,110

G

pyridoxal kinase like 1

rno:00750

NCBI chr20:10,162,934...10,192,572
Ensembl chr20:10,164,099...10,192,739

G

pyridoxal phosphatase

SMP:00017 rno:00750

NCBI chr 7:110,472,515...110,477,963
Ensembl chr 7:110,472,515...110,477,963

G

phosphatase, orphan 2

rno:00750

NCBI chr 3:54,554,829...54,561,990
Ensembl chr 3:54,554,733...54,562,238

G

pyridoxamine 5'-phosphate oxidase

SMP:00017 rno:00750

NCBI chr10:81,924,584...81,930,844
Ensembl chr10:81,924,569...81,930,871

G

phosphoserine aminotransferase 1

rno:00750

NCBI chr 1:213,196,709...213,218,564
Ensembl chr 1:213,196,709...213,218,682

Term paths to the root

Path 1
Term	Annotations
pathway	6097
classic metabolic pathway	1854
metabolic pathway of cofactors, vitamins, nutrients	367
vitamin B6 metabolic pathway	9

paths to the root