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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:metabolic pathway of other amino acids
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Accession:PW:0000132 term browser browse the term
Definition:Those metabolic reactions involved in the synthesis, utilization and/or degradation of amino acids other than the common 20 amino acids found in protein. Some of these amino acids like carnitine or homocysteine derive from primary amino acids.


show annotations for term's descendants           Sort by:
beta-alanine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IEA
ISO		 KEGG
SMPDB		 SMP:00007 mmu:00410 NCBI chr16:8,331,293...8,439,432
Ensembl chr16:8,331,293...8,439,432 		JBrowse link
G Acadm acyl-Coenzyme A dehydrogenase, medium chain IEA KEGG mmu:00410 NCBI chr 3:153,627,990...153,650,280
Ensembl chr 3:153,627,994...153,650,269 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase family 1, subfamily A1 IEA KEGG mmu:00410 NCBI chr19:20,469,947...20,620,827
Ensembl chr19:20,470,079...20,620,829 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase family 1, subfamily A3 IEA KEGG mmu:00410 NCBI chr 7:66,040,640...66,077,225
Ensembl chr 7:66,040,638...66,077,265 		JBrowse link
G Aldh1b1 aldehyde dehydrogenase 1 family, member B1 IEA KEGG mmu:00410 NCBI chr 4:45,799,022...45,804,608
Ensembl chr 4:45,799,022...45,804,604 		JBrowse link
G Aldh2 aldehyde dehydrogenase 2, mitochondrial IEA
ISO		 KEGG
SMPDB		 SMP:00007 mmu:00410 NCBI chr 5:121,704,090...121,731,887
Ensembl chr 5:121,704,090...121,731,887 		JBrowse link
G Aldh3a1 aldehyde dehydrogenase family 3, subfamily A1 IEA KEGG mmu:00410 NCBI chr11:61,099,336...61,109,244
Ensembl chr11:61,098,363...61,109,247 		JBrowse link
G Aldh3a2 aldehyde dehydrogenase family 3, subfamily A2 IEA KEGG mmu:00410 NCBI chr11:61,114,240...61,158,267
Ensembl chr11:61,114,243...61,158,290 		JBrowse link
G Aldh3b1 aldehyde dehydrogenase 3 family, member B1 IEA KEGG mmu:00410 NCBI chr19:3,963,491...3,980,898
Ensembl chr19:3,963,491...3,979,808 		JBrowse link
G Aldh3b2 aldehyde dehydrogenase 3 family, member B2 IEA KEGG mmu:00410 NCBI chr19:4,022,328...4,031,665
Ensembl chr19:4,022,328...4,031,646 		JBrowse link
G Aldh6a1 aldehyde dehydrogenase family 6, subfamily A1 ISO SMPDB SMP:00007 NCBI chr12:84,477,491...84,497,798
Ensembl chr12:84,477,491...84,497,778 		JBrowse link
G Aldh7a1 aldehyde dehydrogenase family 7, member A1 IEA KEGG mmu:00410 NCBI chr18:56,657,794...56,706,112
Ensembl chr18:56,642,759...56,706,023 		JBrowse link
G Aldh9a1 aldehyde dehydrogenase 9, subfamily A1 IEA KEGG mmu:00410 NCBI chr 1:167,177,560...167,196,100
Ensembl chr 1:167,177,560...167,196,101 		JBrowse link
G Aoc2 amine oxidase copper containing 2 IEA KEGG mmu:00410 NCBI chr11:101,214,467...101,220,633
Ensembl chr11:101,215,889...101,220,528 		JBrowse link
G Aoc3 amine oxidase, copper containing 3 IEA
ISO		 KEGG
SMPDB		 SMP:00007 mmu:00410 NCBI chr11:101,221,432...101,230,256
Ensembl chr11:101,221,431...101,232,764 		JBrowse link
G Carns1 carnosine synthase 1 IEA KEGG mmu:00410 NCBI chr19:4,214,323...4,227,390
Ensembl chr19:4,214,323...4,225,478 		JBrowse link
G Cndp1 carnosine dipeptidase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00007 mmu:00410 NCBI chr18:84,628,509...84,668,359
Ensembl chr18:84,628,634...84,668,220 		JBrowse link
G Dpyd dihydropyrimidine dehydrogenase IEA
ISO		 KEGG
SMPDB		 SMP:00007 mmu:00410 NCBI chr 3:118,355,758...119,226,573
Ensembl chr 3:118,355,778...119,226,573 		JBrowse link
G Dpys dihydropyrimidinase IEA
ISO		 KEGG
SMPDB		 SMP:00007 mmu:00410 NCBI chr15:39,631,881...39,720,866
Ensembl chr15:39,631,883...39,720,866 		JBrowse link
G Echs1 enoyl Coenzyme A hydratase, short chain, 1, mitochondrial IEA KEGG mmu:00410 NCBI chr 7:139,685,623...139,696,334
Ensembl chr 7:139,685,623...139,696,389 		JBrowse link
G Ehhadh enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A dehydrogenase IEA KEGG mmu:00410 NCBI chr16:21,580,035...21,606,589
Ensembl chr16:21,580,037...21,606,557 		JBrowse link
G Gad1 glutamate decarboxylase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00007 mmu:00410 NCBI chr 2:70,391,644...70,432,358
Ensembl chr 2:70,383,416...70,432,358 		JBrowse link
G Gad2 glutamic acid decarboxylase 2 IEA KEGG mmu:00410 NCBI chr 2:22,512,262...22,583,889
Ensembl chr 2:22,512,217...22,583,886 		JBrowse link
G Hadha hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha IEA KEGG mmu:00410 NCBI chr 5:30,324,421...30,359,978
Ensembl chr 5:30,323,302...30,360,160 		JBrowse link
G Hibch 3-hydroxyisobutyryl-Coenzyme A hydrolase IEA KEGG mmu:00410 NCBI chr 1:52,884,197...52,960,145
Ensembl chr 1:52,884,088...52,960,145 		JBrowse link
G Mlycd malonyl-CoA decarboxylase IEA KEGG mmu:00410 NCBI chr 8:120,121,591...120,148,577
Ensembl chr 8:120,121,617...120,137,841 		JBrowse link
G Sms spermine synthase IEA KEGG mmu:00410 NCBI chr  X:156,226,847...156,275,283
Ensembl chr  X:156,226,851...156,275,283 		JBrowse link
G Srm spermidine synthase IEA KEGG mmu:00410 NCBI chr 4:148,675,970...148,679,076
Ensembl chr 4:148,675,960...148,679,450 		JBrowse link
G Upb1 ureidopropionase, beta IEA
ISO		 KEGG
SMPDB		 SMP:00007 mmu:00410 NCBI chr10:75,242,745...75,277,513
Ensembl chr10:75,236,949...75,277,513 		JBrowse link
carnitine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh9a1 aldehyde dehydrogenase 9, subfamily A1 ISO SMPDB SMP:00465 NCBI chr 1:167,177,560...167,196,100
Ensembl chr 1:167,177,560...167,196,101 		JBrowse link
G Bbox1 gamma-butyrobetaine hydroxylase 1 ISO SMPDB SMP:00465 NCBI chr 2:110,094,401...110,145,158
Ensembl chr 2:110,093,042...110,144,905 		JBrowse link
G Setd7 SET domain containing (lysine methyltransferase) 7 ISO SMPDB SMP:00465 NCBI chr 3:51,422,740...51,468,519
Ensembl chr 3:51,422,740...51,468,300 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 (soluble) ISO SMPDB SMP:00465 NCBI chr11:60,678,933...60,702,091
Ensembl chr11:60,678,930...60,702,544 		JBrowse link
G Tmlhe trimethyllysine hydroxylase, epsilon ISO SMPDB SMP:00465
creatine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ckm creatine kinase, muscle ISO RGD PMID:12069495 RGD:1359082 NCBI chr 7:19,145,019...19,155,508
Ensembl chr 7:19,138,701...19,156,766 		JBrowse link
G Gamt guanidinoacetate methyltransferase ISO RGD PMID:12069495 RGD:1359082 NCBI chr10:80,093,985...80,096,846
Ensembl chr10:80,093,985...80,096,846 		JBrowse link
G Gatm glycine amidinotransferase (L-arginine:glycine amidinotransferase) ISO RGD PMID:8021264 RGD:70746 NCBI chr 2:122,424,954...122,441,758
Ensembl chr 2:122,424,948...122,441,784 		JBrowse link
G Slc6a8 solute carrier family 6 (neurotransmitter transporter, creatine), member 8 ISO RGD PMID:12069495 RGD:1359082 NCBI chr  X:72,716,739...72,726,108
Ensembl chr  X:72,716,756...72,726,108 		JBrowse link
cyanoamino acid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt1 gamma-glutamyltransferase 1 IEA KEGG mmu:00460 NCBI chr10:75,396,910...75,422,027
Ensembl chr10:75,397,438...75,422,034 		JBrowse link
G Ggt5 gamma-glutamyltransferase 5 IEA KEGG mmu:00460 NCBI chr10:75,425,161...75,453,034
Ensembl chr10:75,425,174...75,453,034 		JBrowse link
G Ggt6 gamma-glutamyltransferase 6 IEA KEGG mmu:00460 NCBI chr11:72,326,067...72,329,392
Ensembl chr11:72,326,352...72,329,226 		JBrowse link
G Ggt7 gamma-glutamyltransferase 7 IEA KEGG mmu:00460 NCBI chr 2:155,332,299...155,356,921
Ensembl chr 2:155,332,299...155,360,157 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 (soluble) IEA KEGG mmu:00460 NCBI chr11:60,678,933...60,702,091
Ensembl chr11:60,678,930...60,702,544 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 (mitochondrial) IEA KEGG mmu:00460 NCBI chr10:127,352,992...127,358,313
Ensembl chr10:127,352,992...127,358,313 		JBrowse link
D-arginine and D-ornithine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase IEA KEGG mmu:00472 NCBI chr 5:114,137,696...114,163,736
Ensembl chr 5:114,141,764...114,163,743 		JBrowse link
D-glutamine and D-glutamate metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase IEA KEGG mmu:00471 NCBI chr 1:52,202,608...52,274,168
Ensembl chr 1:52,202,607...52,272,391 		JBrowse link
G Gls2 glutaminase 2 (liver, mitochondrial) IEA KEGG mmu:00471 NCBI chr10:128,030,504...128,045,873
Ensembl chr10:128,030,326...128,045,873 		JBrowse link
G Glud1 glutamate dehydrogenase 1 IEA KEGG mmu:00471 NCBI chr14:34,032,684...34,066,990
Ensembl chr14:34,032,684...34,067,222 		JBrowse link
glutathione metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anpep alanyl aminopeptidase, membrane IEA
ISO		 KEGG
SMPDB		 SMP:00015 mmu:00480 NCBI chr 7:79,471,551...79,497,958
Ensembl chr 7:79,471,551...79,510,807 		JBrowse link
G Casp7 caspase 7 ISO SMPDB SMP:00015 NCBI chr19:56,382,640...56,430,780
Ensembl chr19:56,385,561...56,430,776 		JBrowse link
G G6pd2 glucose-6-phosphate dehydrogenase 2 IEA KEGG mmu:00480 NCBI chr 5:61,966,186...61,967,820
Ensembl chr 5:61,966,159...61,968,506 		JBrowse link
G G6pdx glucose-6-phosphate dehydrogenase X-linked IEA KEGG mmu:00480 NCBI chr  X:73,453,089...73,472,486
Ensembl chr  X:73,453,089...73,472,800 		JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit IEA
ISO		 KEGG
SMPDB		 SMP:00015 mmu:00480 NCBI chr 9:77,661,817...77,701,771
Ensembl chr 9:77,661,817...77,701,767 		JBrowse link
G Gclm glutamate-cysteine ligase, modifier subunit IEA
ISO		 KEGG
SMPDB		 SMP:00015 mmu:00480 NCBI chr 3:122,039,206...122,060,864
Ensembl chr 3:122,039,206...122,064,381 		JBrowse link
G Ggct gamma-glutamyl cyclotransferase IEA
ISO		 KEGG
SMPDB		 SMP:00015 mmu:00480 NCBI chr 6:54,962,080...54,969,947
Ensembl chr 6:54,959,565...54,969,935 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEA KEGG mmu:00480 NCBI chr10:75,396,910...75,422,027
Ensembl chr10:75,397,438...75,422,034 		JBrowse link
G Ggt5 gamma-glutamyltransferase 5 IEA KEGG mmu:00480 NCBI chr10:75,425,161...75,453,034
Ensembl chr10:75,425,174...75,453,034 		JBrowse link
G Ggt6 gamma-glutamyltransferase 6 IEA
ISO		 KEGG
SMPDB		 SMP:00015 mmu:00480 NCBI chr11:72,326,067...72,329,392
Ensembl chr11:72,326,352...72,329,226 		JBrowse link
G Ggt7 gamma-glutamyltransferase 7 IEA KEGG mmu:00480 NCBI chr 2:155,332,299...155,356,921
Ensembl chr 2:155,332,299...155,360,157 		JBrowse link
G Gpx1 glutathione peroxidase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00015 mmu:00480 NCBI chr 9:108,216,279...108,217,541
Ensembl chr 9:108,216,102...108,217,542 		JBrowse link
G Gpx2 glutathione peroxidase 2 IEA KEGG mmu:00480 NCBI chr12:76,839,109...76,842,328
Ensembl chr12:76,839,107...76,842,273 		JBrowse link
G Gpx3 glutathione peroxidase 3 IEA KEGG mmu:00480 NCBI chr11:54,793,680...54,801,213
Ensembl chr11:54,793,279...54,801,203 		JBrowse link
G Gpx4 glutathione peroxidase 4 IEA KEGG mmu:00480 NCBI chr10:79,883,000...79,892,273
Ensembl chr10:79,883,000...79,892,273 		JBrowse link
G Gpx5 glutathione peroxidase 5 IEA KEGG mmu:00480 NCBI chr13:21,470,599...21,476,897
Ensembl chr13:21,470,599...21,476,901 		JBrowse link
G Gpx6 glutathione peroxidase 6 IEA KEGG mmu:00480 NCBI chr13:21,479,635...21,503,795
Ensembl chr13:21,496,295...21,503,794 		JBrowse link
G Gpx7 glutathione peroxidase 7 IEA KEGG mmu:00480 NCBI chr 4:108,257,414...108,263,910
Ensembl chr 4:108,257,587...108,264,158 		JBrowse link
G Gpx8 glutathione peroxidase 8 (putative) IEA KEGG mmu:00480 NCBI chr13:113,179,287...113,182,944
Ensembl chr13:113,179,287...113,182,944 		JBrowse link
G Gsr glutathione reductase IEA
ISO		 KEGG
SMPDB		 SMP:00015 mmu:00480 NCBI chr 8:34,143,266...34,188,190
Ensembl chr 8:34,142,551...34,188,191 		JBrowse link
G Gss glutathione synthetase IEA
ISO		 KEGG
SMPDB		 SMP:00015 mmu:00480 NCBI chr 2:155,405,101...155,434,730
Ensembl chr 2:155,405,101...155,434,730 		JBrowse link
G Gsta1 glutathione S-transferase, alpha 1 (Ya) IEA KEGG mmu:00480 NCBI chr 9:78,137,951...78,149,965
Ensembl chr 9:78,137,938...78,149,966 		JBrowse link
G Gsta2 glutathione S-transferase, alpha 2 (Yc2) IEA KEGG mmu:00480 NCBI chr 9:78,238,300...78,254,474
Ensembl chr 9:78,238,300...78,263,070 		JBrowse link
G Gsta3 glutathione S-transferase, alpha 3 IEA KEGG mmu:00480 NCBI chr 1:21,310,789...21,335,799
Ensembl chr 1:21,310,813...21,335,885 		JBrowse link
G Gsta4 glutathione S-transferase, alpha 4 IEA KEGG mmu:00480 NCBI chr 9:78,099,248...78,116,631
Ensembl chr 9:78,090,056...78,116,631 		JBrowse link
G Gstk1 glutathione S-transferase kappa 1 IEA KEGG mmu:00480 NCBI chr 6:42,222,869...42,227,375
Ensembl chr 6:42,222,869...42,227,381 		JBrowse link
G Gstm1 glutathione S-transferase, mu 1 IEA KEGG mmu:00480 NCBI chr 3:107,919,566...107,925,289
Ensembl chr 3:107,919,571...107,925,289 		JBrowse link
G Gstm2 glutathione S-transferase, mu 2 IEA KEGG mmu:00480 NCBI chr 3:107,889,018...107,893,736
Ensembl chr 3:107,889,018...107,893,769 		JBrowse link
G Gstm3 glutathione S-transferase, mu 3 IEA KEGG mmu:00480 NCBI chr 3:107,871,019...107,876,484
Ensembl chr 3:107,871,012...107,876,599 		JBrowse link
G Gstm4 glutathione S-transferase, mu 4 IEA KEGG mmu:00480 NCBI chr 3:107,937,887...107,952,495
Ensembl chr 3:107,947,724...107,952,210 		JBrowse link
G Gstm5 glutathione S-transferase, mu 5 IEA KEGG mmu:00480 NCBI chr 3:107,803,240...107,806,002
Ensembl chr 3:107,803,137...107,806,002 		JBrowse link
G Gstm6 glutathione S-transferase, mu 6 IEA KEGG mmu:00480 NCBI chr 3:107,846,163...107,860,957
Ensembl chr 3:107,846,163...107,851,065 		JBrowse link
G Gstm7 glutathione S-transferase, mu 7 IEA KEGG mmu:00480 NCBI chr 3:107,833,650...107,839,193
Ensembl chr 3:107,833,650...107,839,133 		JBrowse link
G Gsto1 glutathione S-transferase omega 1 IEA KEGG mmu:00480 NCBI chr19:47,843,412...47,853,229
Ensembl chr19:47,843,409...47,853,229 		JBrowse link
G Gsto2 glutathione S-transferase omega 2 IEA
ISO		 KEGG
SMPDB		 SMP:00015 mmu:00480 NCBI chr19:47,853,879...47,874,747
Ensembl chr19:47,853,973...47,874,763 		JBrowse link
G Gstp1 glutathione S-transferase, pi 1 IEA KEGG mmu:00480 NCBI chr19:4,085,411...4,087,912
Ensembl chr19:4,085,407...4,087,985 		JBrowse link
G Gstp2 glutathione S-transferase, pi 2 IEA KEGG mmu:00480 NCBI chr19:4,090,288...4,092,221
Ensembl chr19:4,090,285...4,096,023 		JBrowse link
G Gstt1 glutathione S-transferase, theta 1 IEA KEGG mmu:00480 NCBI chr10:75,619,647...75,634,418
Ensembl chr10:75,619,647...75,634,418 		JBrowse link
G Gstt2 glutathione S-transferase, theta 2 IEA KEGG mmu:00480 NCBI chr10:75,667,676...75,673,253
Ensembl chr10:75,666,948...75,673,258 		JBrowse link
G Gstz1 glutathione transferase zeta 1 (maleylacetoacetate isomerase) IEA KEGG mmu:00480 NCBI chr12:87,192,102...87,211,497
Ensembl chr12:87,193,939...87,211,497 		JBrowse link
G Idh1 isocitrate dehydrogenase 1 (NADP+), soluble IEA KEGG mmu:00480 NCBI chr 1:65,197,775...65,225,638
Ensembl chr 1:65,197,775...65,225,659 		JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial IEA KEGG mmu:00480 NCBI chr 7:79,744,594...79,768,356
Ensembl chr 7:79,744,594...79,765,140 		JBrowse link
G Lap3 leucine aminopeptidase 3 IEA KEGG mmu:00480 NCBI chr 5:45,650,716...45,670,033
Ensembl chr 5:45,650,716...45,670,033 		JBrowse link
G Mgst1 microsomal glutathione S-transferase 1 IEA KEGG mmu:00480 NCBI chr 6:138,117,525...138,133,753
Ensembl chr 6:138,117,314...138,133,753 		JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 IEA KEGG mmu:00480 NCBI chr 3:51,544,179...51,590,096
Ensembl chr 3:51,567,781...51,590,098 		JBrowse link
G Mgst3 microsomal glutathione S-transferase 3 IEA KEGG mmu:00480 NCBI chr 1:167,199,535...167,221,410
Ensembl chr 1:167,199,535...167,221,410 		JBrowse link
G Odc1 ornithine decarboxylase, structural 1 IEA KEGG mmu:00480 NCBI chr12:17,594,906...17,601,503
Ensembl chr12:17,594,795...17,601,506 		JBrowse link
G Oplah 5-oxoprolinase (ATP-hydrolysing) IEA
ISO		 KEGG
SMPDB		 SMP:00015 mmu:00480 NCBI chr15:76,180,803...76,215,381
Ensembl chr15:76,180,801...76,212,215 		JBrowse link
G Pgd phosphogluconate dehydrogenase IEA KEGG mmu:00480 NCBI chr 4:149,234,448...149,251,162
Ensembl chr 4:149,234,448...149,251,228 		JBrowse link
G Rrm1 ribonucleotide reductase M1 IEA KEGG mmu:00480 NCBI chr 7:102,090,902...102,118,978
Ensembl chr 7:102,090,902...102,118,978 		JBrowse link
G Rrm2 ribonucleotide reductase M2 IEA KEGG mmu:00480 NCBI chr12:24,758,253...24,764,145
Ensembl chr12:24,758,240...24,764,145 		JBrowse link
G Rrm2b ribonucleotide reductase M2 B (TP53 inducible) IEA KEGG mmu:00480 NCBI chr15:37,924,196...37,961,562
Ensembl chr15:37,924,196...37,961,562 		JBrowse link
G Sms spermine synthase IEA KEGG mmu:00480 NCBI chr  X:156,226,847...156,275,283
Ensembl chr  X:156,226,851...156,275,283 		JBrowse link
G Srm spermidine synthase IEA KEGG mmu:00480 NCBI chr 4:148,675,970...148,679,076
Ensembl chr 4:148,675,960...148,679,450 		JBrowse link
G Txndc12 thioredoxin domain containing 12 (endoplasmic reticulum) IEA KEGG mmu:00480 NCBI chr 4:108,691,875...108,719,317
Ensembl chr 4:108,691,798...108,719,324 		JBrowse link
homocysteine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy S-adenosylhomocysteine hydrolase ISS
ISO		 RGD PMID:11741948 PMID:20814827 RGD:730275, RGD:7242426 NCBI chr 2:154,901,230...154,916,417
Ensembl chr 2:154,901,230...154,916,417 		JBrowse link
G As3mt arsenite methyltransferase ISO RGD PMID:11790780 RGD:625365 NCBI chr19:46,695,124...46,729,538
Ensembl chr19:46,695,897...46,729,538 		JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 ISO RGD PMID:15866169 RGD:1359044 NCBI chr 9:21,458,163...21,500,763
Ensembl chr 9:21,458,190...21,503,919 		JBrowse link
G Comt catechol-O-methyltransferase ISO RGD PMID:12584150 RGD:1359089 NCBI chr16:18,225,632...18,247,006
Ensembl chr16:18,225,636...18,245,602 		JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:12473678 RGD:1359078 NCBI chr 9:20,818,501...20,871,084
Ensembl chr 9:20,818,505...20,871,184 		JBrowse link
G Gamt guanidinoacetate methyltransferase ISO RGD PMID:15533043 RGD:1359081 NCBI chr10:80,093,985...80,096,846
Ensembl chr10:80,093,985...80,096,846 		JBrowse link
G Gnmt glycine N-methyltransferase ISO RGD PMID:15347642 RGD:1359070 NCBI chr17:47,036,590...47,040,091
Ensembl chr17:47,036,590...47,040,094 		JBrowse link
G Hnmt histamine N-methyltransferase ISO RGD PMID:11566133 RGD:1359041 NCBI chr 2:23,892,923...23,939,756
Ensembl chr 2:23,892,922...23,939,406 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008 		JBrowse link
G Nnmt nicotinamide N-methyltransferase ISO RGD PMID:15922112 RGD:1359084 NCBI chr 9:48,448,905...48,518,958
Ensembl chr 9:48,503,177...48,516,453 		JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 ISO RGD PMID:8263531 RGD:729481 NCBI chr10:7,503,608...7,556,922
Ensembl chr10:7,505,137...7,556,900 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase ISO RGD PMID:8344945 RGD:729486 NCBI chr11:59,861,440...59,937,394
Ensembl chr11:59,861,440...59,937,315 		JBrowse link
G Pnmt phenylethanolamine-N-methyltransferase ISO RGD PMID:12438084 RGD:1359087 NCBI chr11:98,277,449...98,279,006
Ensembl chr11:98,277,276...98,279,007 		JBrowse link
G Prmt1 protein arginine N-methyltransferase 1 ISO RGD PMID:15866169 RGD:1359044 NCBI chr 7:44,626,179...44,635,844
Ensembl chr 7:44,625,413...44,635,992 		JBrowse link
G Prmt5 protein arginine N-methyltransferase 5 ISO RGD PMID:15866169 RGD:1359044 NCBI chr14:54,744,639...54,754,927
Ensembl chr14:54,744,644...54,754,982 		JBrowse link
G Prmt6 protein arginine N-methyltransferase 6 ISO RGD PMID:15866169 RGD:1359044 NCBI chr 3:110,153,420...110,158,315
Ensembl chr 3:110,153,425...110,158,314 		JBrowse link
G Rnmt RNA (guanine-7-) methyltransferase ISO RGD PMID:11472630 RGD:1359071 NCBI chr18:68,433,406...68,457,923
Ensembl chr18:68,433,426...68,457,923 		JBrowse link
G Setdb1 SET domain, bifurcated 1 ISO RGD PMID:11959841 RGD:1359072 NCBI chr 3:95,230,836...95,264,513
Ensembl chr 3:95,230,836...95,264,513 		JBrowse link
remethylation pathway of homocysteine metabolism - cobalamin dependent term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfr methylenetetrahydrofolate reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chr 4:148,123,534...148,144,019
Ensembl chr 4:148,123,534...148,144,008 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:20814827 RGD:7242426 NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chr13:68,708,897...68,730,273
Ensembl chr13:68,708,899...68,730,268 		JBrowse link
remethylation pathway of homocysteine metabolism - cobalamin independent, betaine dependent term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy S-adenosylhomocysteine hydrolase ISO SMPDB SMP:00123 NCBI chr 2:154,901,230...154,916,417
Ensembl chr 2:154,901,230...154,916,417 		JBrowse link
G Aldh7a1 aldehyde dehydrogenase family 7, member A1 ISO SMPDB SMP:00123 NCBI chr18:56,657,794...56,706,112
Ensembl chr18:56,642,759...56,706,023 		JBrowse link
G Bhmt betaine-homocysteine methyltransferase ISO SMPDB
RGD		 PMID:20814827 PMID:20346934 SMP:00123, RGD:7242426, RGD:7242428 NCBI chr13:93,753,399...93,774,266
Ensembl chr13:93,753,183...93,774,469 		JBrowse link
G Chdh choline dehydrogenase ISO SMPDB SMP:00123 NCBI chr14:29,730,957...29,762,423
Ensembl chr14:29,730,980...29,762,484 		JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO SMPDB SMP:00123 NCBI chr 6:72,409,779...72,416,539
Ensembl chr 6:72,409,782...72,416,541 		JBrowse link
G Mat2b methionine adenosyltransferase 2 non-catalytic beta subunit methionine ISO SMPDB SMP:00123 NCBI chr11:40,570,141...40,586,030
Ensembl chr11:40,570,141...40,586,030 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ISO SMPDB SMP:00123 NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999 		JBrowse link
G Pemt phosphatidylethanolamine N-methyltransferase ISO SMPDB SMP:00123 NCBI chr11:59,861,440...59,937,394
Ensembl chr11:59,861,440...59,937,315 		JBrowse link
selenoamino acid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy S-adenosylhomocysteine hydrolase ISO SMPDB SMP:00029 NCBI chr 2:154,901,230...154,916,417
Ensembl chr 2:154,901,230...154,916,417 		JBrowse link
G Cbs cystathionine beta-synthase ISO SMPDB SMP:00029 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212 		JBrowse link
G Cth cystathionine gamma lyase IEA
ISO		 KEGG
SMPDB		 SMP:00029 mmu:00450 NCBI chr 3:157,599,885...157,630,718
Ensembl chr 3:157,599,885...157,630,714 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 ISO SMPDB SMP:00029 NCBI chr10:75,396,910...75,422,027
Ensembl chr10:75,397,438...75,422,034 		JBrowse link
G Inmt indolethylamine N-methyltransferase IEA KEGG mmu:00450 NCBI chr 6:55,147,612...55,151,975
Ensembl chr 6:55,147,611...55,152,028 		JBrowse link
G Kyat1 kynurenine aminotransferase 1 IEA KEGG mmu:00450 NCBI chr 2:30,075,136...30,096,307
Ensembl chr 2:30,075,136...30,095,859 		JBrowse link
G Kyat3 kynurenine aminotransferase 3 IEA KEGG mmu:00450 NCBI chr 3:142,406,780...142,450,672
Ensembl chr 3:142,406,812...142,452,631 		JBrowse link
G Mars1 methionine-tRNA synthetase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00029 mmu:00450 NCBI chr10:127,132,090...127,147,655
Ensembl chr10:127,132,090...127,147,655 		JBrowse link
G Mars2 methionine-tRNA synthetase 2 (mitochondrial) IEA KEGG mmu:00450 NCBI chr 1:55,276,336...55,279,217
Ensembl chr 1:55,276,336...55,287,629 		JBrowse link
G Mat2a methionine adenosyltransferase 2A ISO SMPDB SMP:00029 NCBI chr 6:72,409,779...72,416,539
Ensembl chr 6:72,409,782...72,416,541 		JBrowse link
G Mat2b methionine adenosyltransferase 2 non-catalytic beta subunit methionine ISO SMPDB SMP:00029 NCBI chr11:40,570,141...40,586,030
Ensembl chr11:40,570,141...40,586,030 		JBrowse link
G Mettl6 methyltransferase 6, methylcytidine ISO SMPDB SMP:00029 NCBI chr14:31,180,775...31,217,007
Ensembl chr14:31,195,535...31,216,997 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase IEA KEGG mmu:00450 NCBI chr13:12,196,217...12,273,090
Ensembl chr13:12,197,598...12,272,999 		JBrowse link
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00029 mmu:00450 NCBI chr 3:131,270,626...131,349,432
Ensembl chr 3:131,270,529...131,349,432 		JBrowse link
G Papss2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 IEA KEGG mmu:00450 NCBI chr19:32,573,072...32,644,587
Ensembl chr19:32,573,190...32,644,587 		JBrowse link
G Pstk phosphoseryl-tRNA kinase IEA KEGG mmu:00450 NCBI chr 7:130,972,843...130,994,497
Ensembl chr 7:130,972,870...130,996,211 		JBrowse link
G Scly selenocysteine lyase IEA
ISO		 KEGG
SMPDB		 SMP:00029 mmu:00450 NCBI chr 1:91,226,017...91,248,797
Ensembl chr 1:91,226,060...91,248,797 		JBrowse link
G Sephs1 selenophosphate synthetase 1 IEA KEGG mmu:00450 NCBI chr 2:4,886,375...4,915,368
Ensembl chr 2:4,886,375...4,915,368 		JBrowse link
G Sephs2 selenophosphate synthetase 2 IEA
ISO		 KEGG
SMPDB		 SMP:00029 mmu:00450 NCBI chr 7:126,871,051...126,873,231
Ensembl chr 7:126,871,051...126,873,227 		JBrowse link
G Sepsecs Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase IEA KEGG mmu:00450 NCBI chr 5:52,797,431...52,827,104
Ensembl chr 5:52,797,429...52,827,050 		JBrowse link
G Txnrd1 thioredoxin reductase 1 IEA KEGG mmu:00450 NCBI chr10:82,669,785...82,733,558
Ensembl chr10:82,669,785...82,733,546 		JBrowse link
G Txnrd2 thioredoxin reductase 2 IEA KEGG mmu:00450 NCBI chr16:18,245,167...18,297,823
Ensembl chr16:18,245,134...18,297,823 		JBrowse link
G Txnrd3 thioredoxin reductase 3 IEA KEGG mmu:00450 NCBI chr 6:89,620,970...89,652,511
Ensembl chr 6:89,620,970...89,652,511 		JBrowse link
taurine and hypotaurine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ado 2-aminoethanethiol dioxygenase IEA
ISO		 KEGG
SMPDB		 SMP:00021 mmu:00430 NCBI chr10:67,380,341...67,384,785
Ensembl chr10:67,380,341...67,384,898 		JBrowse link
G Baat bile acid-Coenzyme A: amino acid N-acyltransferase IEA KEGG mmu:00430 NCBI chr 4:49,489,416...49,507,915
Ensembl chr 4:49,489,422...49,506,557 		JBrowse link
G Cdo1 cysteine dioxygenase 1, cytosolic IEA
ISO		 KEGG
SMPDB		 SMP:00021 mmu:00430 NCBI chr18:46,846,260...46,861,569
Ensembl chr18:46,846,260...46,861,462 		JBrowse link
G Csad cysteine sulfinic acid decarboxylase IEA
ISO		 KEGG
SMPDB		 SMP:00021 mmu:00430 NCBI chr15:102,085,432...102,112,685
Ensembl chr15:102,085,434...102,113,159 		JBrowse link
G Gad1 glutamate decarboxylase 1 IEA
ISO		 KEGG
SMPDB		 SMP:00021 mmu:00430 NCBI chr 2:70,391,644...70,432,358
Ensembl chr 2:70,383,416...70,432,358 		JBrowse link
G Gad2 glutamic acid decarboxylase 2 IEA KEGG mmu:00430 NCBI chr 2:22,512,262...22,583,889
Ensembl chr 2:22,512,217...22,583,886 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 IEA KEGG mmu:00430 NCBI chr10:75,396,910...75,422,027
Ensembl chr10:75,397,438...75,422,034 		JBrowse link
G Ggt5 gamma-glutamyltransferase 5 IEA KEGG mmu:00430 NCBI chr10:75,425,161...75,453,034
Ensembl chr10:75,425,174...75,453,034 		JBrowse link
G Ggt6 gamma-glutamyltransferase 6 IEA
ISO		 KEGG
SMPDB		 SMP:00021 mmu:00430 NCBI chr11:72,326,067...72,329,392
Ensembl chr11:72,326,352...72,329,226 		JBrowse link
G Ggt7 gamma-glutamyltransferase 7 IEA KEGG mmu:00430 NCBI chr 2:155,332,299...155,356,921
Ensembl chr 2:155,332,299...155,360,157 		JBrowse link
transsulfuration pathway of homocysteine metabolism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase ISO SMPDB
RGD		 PMID:20162368 SMP:00455, RGD:7242427 NCBI chr17:31,831,602...31,856,170
Ensembl chr17:31,827,868...31,856,212 		JBrowse link
G Cdo1 cysteine dioxygenase 1, cytosolic ISO RGD PMID:20162368 RGD:7242427 NCBI chr18:46,846,260...46,861,569
Ensembl chr18:46,846,260...46,861,462 		JBrowse link
G Csad cysteine sulfinic acid decarboxylase ISO RGD PMID:20162368 RGD:7242427 NCBI chr15:102,085,432...102,112,685
Ensembl chr15:102,085,434...102,113,159 		JBrowse link
G Cth cystathionine gamma lyase ISO SMPDB
RGD		 PMID:20162368 SMP:00455, RGD:7242427 NCBI chr 3:157,599,885...157,630,718
Ensembl chr 3:157,599,885...157,630,714 		JBrowse link
Term paths to the root