Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:RNA polymerase II transcription pathway
go back to main search page
Accession:PW:0000127 term browser browse the term
Definition:The series of events governing the synthesis of protein-coding messenger RNA (mRNA) precursors and of transcripts of many classes of non-coding genes.
Synonyms:related_synonym: RNA Polymerase II Transcription;   transcription by RNA polymerase II

View Interactive Diagram


GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
RNA polymerase II transcription pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnc cyclin C ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936651:1,123,546...1,159,089
Ensembl chrNW_004936651:1,140,895...1,163,944
JBrowse link
G Cdc14b cell division cycle 14B ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004936487:430,449...482,517
Ensembl chrNW_004936487:554,611...564,782
JBrowse link
G Cdk12 cyclin dependent kinase 12 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004936490:14,674,783...14,759,433
Ensembl chrNW_004936490:14,674,800...14,738,818
JBrowse link
G Cdk19 cyclin dependent kinase 19 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936564:6,443,041...6,584,767
Ensembl chrNW_004936564:6,442,809...6,567,210
JBrowse link
G Cdk7 cyclin dependent kinase 7 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004936480:307,089...339,515
Ensembl chrNW_004936480:307,069...339,521
JBrowse link
G Cdk8 cyclin dependent kinase 8 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 PMID:24088064 RGD:9681732 RGD:9681737 RGD:9681738 NCBI chrNW_004936948:91,578...236,051 JBrowse link
G Cdk9 cyclin dependent kinase 9 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004936487:15,446,864...15,450,750
Ensembl chrNW_004936487:15,446,858...15,452,796
JBrowse link
G Ctdp1 CTD phosphatase subunit 1 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004936616:369,306...407,083
Ensembl chrNW_004936616:369,893...407,093
JBrowse link
G Ctdsp1 CTD small phosphatase 1 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004936569:901,357...905,149
Ensembl chrNW_004936569:900,439...903,622
JBrowse link
G LOC101967362 mediator of RNA polymerase II transcription subunit 6 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936488:195,629...218,762
Ensembl chrNW_004936488:97,118...99,286
Ensembl chrNW_004936488:97,118...99,286
JBrowse link
G LOC101972535 dual specificity protein phosphatase CDC14A ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004936748:479,026...612,554
Ensembl chrNW_004936748:479,503...623,126
JBrowse link
G Med1 mediator complex subunit 1 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936490:14,625,201...14,663,184
Ensembl chrNW_004936490:14,625,897...14,657,802
JBrowse link
G Med10 mediator complex subunit 10 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936634:953,567...983,426 JBrowse link
G Med11 mediator complex subunit 11 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936677:3,164,290...3,166,734
Ensembl chrNW_004936677:3,164,070...3,166,102
JBrowse link
G Med12 mediator complex subunit 12 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936762:460,342...483,264
Ensembl chrNW_004936762:460,342...483,195
JBrowse link
G Med12l mediator complex subunit 12L ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936758:1,384,616...1,656,621
Ensembl chrNW_004936758:1,385,854...1,656,608
JBrowse link
G Med13 mediator complex subunit 13 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936490:3,204,717...3,293,458
Ensembl chrNW_004936490:3,202,827...3,293,458
JBrowse link
G Med13l mediator complex subunit 13L ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936558:5,998,760...6,288,666
Ensembl chrNW_004936558:5,998,754...6,289,867
JBrowse link
G Med14 mediator complex subunit 14 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936502:7,280,606...7,350,750
Ensembl chrNW_004936502:7,280,534...7,350,435
JBrowse link
G Med15 mediator complex subunit 15 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936619:2,687,004...2,780,898
Ensembl chrNW_004936619:2,687,011...2,759,294
JBrowse link
G Med16 mediator complex subunit 16 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936588:352,723...370,898
Ensembl chrNW_004936588:355,353...370,859
JBrowse link
G Med17 mediator complex subunit 17 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936674:998,036...1,019,937
Ensembl chrNW_004936674:997,259...1,019,953
JBrowse link
G Med18 mediator complex subunit 18 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936474:12,464,747...12,475,838
Ensembl chrNW_004936474:12,464,702...12,476,506
JBrowse link
G Med19 mediator complex subunit 19 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936581:4,830,872...4,837,583
Ensembl chrNW_004936581:4,831,231...4,837,695
JBrowse link
G Med20 mediator complex subunit 20 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936476:17,896,689...17,976,102
Ensembl chrNW_004936476:17,895,954...17,912,835
JBrowse link
G Med21 mediator complex subunit 21 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936548:461,610...466,682
Ensembl chrNW_004936548:461,605...466,723
JBrowse link
G Med22 mediator complex subunit 22 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936669:3,535,646...3,541,643
Ensembl chrNW_004936669:3,535,640...3,542,338
JBrowse link
G Med23 mediator complex subunit 23 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004937067:14...41,438
Ensembl chrNW_004937067:849...41,298
JBrowse link
G Med24 mediator complex subunit 24 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936490:15,146,598...15,181,449
Ensembl chrNW_004936490:15,146,579...15,171,118
JBrowse link
G Med25 mediator complex subunit 25 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936664:3,610,004...3,629,850
Ensembl chrNW_004936664:3,609,451...3,628,337
JBrowse link
G Med26 mediator complex subunit 26 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936596:4,008,155...4,061,277
Ensembl chrNW_004936596:4,008,118...4,063,421
JBrowse link
G Med27 mediator complex subunit 27 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936487:18,523,979...18,711,584
Ensembl chrNW_004936487:18,523,010...18,711,618
JBrowse link
G Med28 mediator complex subunit 28 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936477:10,586,436...10,592,366 JBrowse link
G Med29 mediator complex subunit 29 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936661:2,241,182...2,244,582
Ensembl chrNW_004936661:2,241,215...2,244,569
JBrowse link
G Med30 mediator complex subunit 30 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936470:28,798,356...28,822,143
Ensembl chrNW_004936470:28,798,649...28,817,176
JBrowse link
G Med31 mediator complex subunit 31 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936677:1,345,448...1,352,155
Ensembl chrNW_004936677:1,345,456...1,351,176
JBrowse link
G Med4 mediator complex subunit 4 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936565:1,397,434...1,414,674
Ensembl chrNW_004936565:1,396,088...1,415,248
JBrowse link
G Med7 mediator complex subunit 7 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936515:5,987,923...5,993,074
Ensembl chrNW_004936515:5,987,858...5,993,074
JBrowse link
G Med8 mediator complex subunit 8 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936474:24,782,751...24,788,066
Ensembl chrNW_004936474:24,781,206...24,788,101
JBrowse link
G Med9 mediator complex subunit 9 ISO RGD PMID:24088064 RGD:9681732 NCBI chrNW_004936741:1,083,822...1,119,967
Ensembl chrNW_004936741:1,106,741...1,120,053
JBrowse link
G Polr2a RNA polymerase II subunit A ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004936595:755,585...781,692
Ensembl chrNW_004936595:755,535...781,783
JBrowse link
G Polr2b RNA polymerase II subunit B ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004936482:19,073,125...19,119,424
Ensembl chrNW_004936482:19,073,124...19,119,421
JBrowse link
G Polr2c RNA polymerase II subunit C ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004936475:9,519,325...9,528,121 JBrowse link
G Polr2d RNA polymerase II subunit D ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004936469:43,482,557...43,495,449
Ensembl chrNW_004936469:43,482,507...43,495,441
JBrowse link
G Polr2e RNA polymerase II, I and III subunit E ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004936588:494,445...499,659
Ensembl chrNW_004936588:494,399...499,952
JBrowse link
G Polr2f RNA polymerase II, I and III subunit F ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004936492:3,186,930...3,196,738
Ensembl chrNW_004936492:3,186,760...3,196,796
JBrowse link
G Polr2g RNA polymerase II subunit G ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004936581:523,018...528,167
Ensembl chrNW_004936581:522,950...528,933
JBrowse link
G Polr2h RNA polymerase II, I and III subunit H ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004936578:5,519,482...5,528,355
Ensembl chrNW_004936578:5,519,462...5,523,744
JBrowse link
G Polr2i RNA polymerase II subunit I ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004936922:130,248...131,843
Ensembl chrNW_004936922:130,257...131,828
JBrowse link
G Polr2j RNA polymerase II subunit J ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004936543:1,895,827...1,899,918
Ensembl chrNW_004936543:1,895,828...1,899,904
JBrowse link
G Polr2k RNA polymerase II, I and III subunit K ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004936470:43,079,377...43,083,251
Ensembl chrNW_004936470:43,081,284...43,083,236
JBrowse link
G Polr2l RNA polymerase II, I and III subunit L ISO RGD PMID:22960599 RGD:9588243 NCBI chrNW_004936544:652,968...653,683 JBrowse link
G Rpap2 RNA polymerase II associated protein 2 ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004936537:6,692,000...6,778,275 JBrowse link
G Ssu72 SSU72 homolog, RNA polymerase II CTD phosphatase ISO pol II carboxyl-terminal domain (CTD) RGD PMID:22622228 PMID:23837720 RGD:9681737 RGD:9681738 NCBI chrNW_004936737:1,678,425...1,705,569
Ensembl chrNW_004936737:1,678,425...1,705,609
JBrowse link
3'-end pre-mRNA processing pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936581:4,870,126...4,873,158
Ensembl chrNW_004936581:4,869,686...4,873,217
JBrowse link
G Cpsf1 cleavage and polyadenylation specific factor 1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936470:7,848,846...7,857,291
Ensembl chrNW_004936470:7,849,329...7,857,214
JBrowse link
G Cpsf2 cleavage and polyadenylation specific factor 2 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936733:367,082...397,242
Ensembl chrNW_004936733:367,109...397,242
JBrowse link
G Cpsf3 cleavage and polyadenylation specific factor 3 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936532:5,814,331...5,850,188
Ensembl chrNW_004936532:5,814,329...5,850,352
JBrowse link
G Cpsf4 cleavage and polyadenylation specific factor 4 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936750:1,699,738...1,715,993
Ensembl chrNW_004936750:1,699,521...1,719,423
JBrowse link
G Cpsf6 cleavage and polyadenylation specific factor 6 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936545:7,045,043...7,077,710
Ensembl chrNW_004936545:7,045,043...7,077,736
JBrowse link
G Cpsf7 cleavage and polyadenylation specific factor 7 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936581:1,629,078...1,651,147
Ensembl chrNW_004936581:1,629,041...1,651,328
JBrowse link
G Cstf1 cleavage stimulation factor subunit 1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936875:310,491...319,027
Ensembl chrNW_004936875:310,442...320,085
JBrowse link
G Cstf2 cleavage stimulation factor subunit 2 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936584:6,042,785...6,066,758
Ensembl chrNW_004936584:6,040,336...6,066,703
JBrowse link
G Cstf2t cleavage stimulation factor subunit 2 tau variant ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936787:838,153...842,118
Ensembl chrNW_004936787:838,485...840,353
JBrowse link
G Cstf3 cleavage stimulation factor subunit 3 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936533:4,754,335...4,832,278
Ensembl chrNW_004936533:4,754,514...4,831,769
JBrowse link
G Dxo decapping exoribonuclease ISO RGD PMID:21957020 RGD:9681741 NCBI chrNW_004936727:1,576,823...1,579,158
Ensembl chrNW_004936727:1,576,886...1,579,154
JBrowse link
G Fip1l1 factor interacting with PAPOLA and CPSF1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936482:16,126,608...16,194,729
Ensembl chrNW_004936482:16,126,536...16,193,962
JBrowse link
G LOC101973872 bcl-2-like protein 2 ISO RGD PMID:24243805 RGD:9681742 NCBI chrNW_004936722:1,039,970...1,044,942
Ensembl chrNW_004936722:1,053,326...1,059,477
Ensembl chrNW_004936722:1,053,326...1,059,477
JBrowse link
G Nudt21 nudix hydrolase 21 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936475:8,739,992...8,759,165
Ensembl chrNW_004936475:8,741,821...8,759,223
JBrowse link
G Papola poly(A) polymerase alpha ISO RGD PMID:24243805 RGD:9681742 NCBI chrNW_004936604:770,050...833,950
Ensembl chrNW_004936604:770,054...834,609
JBrowse link
G Papolb poly(A) polymerase beta ISO RGD PMID:24243805 RGD:9681742 NCBI chrNW_004936765:1,061,846...1,066,002 JBrowse link
G Papolg poly(A) polymerase gamma ISO RGD PMID:24243805 RGD:9681742 NCBI chrNW_004936491:6,285,209...6,320,646
Ensembl chrNW_004936491:6,285,206...6,322,668
JBrowse link
G Pcf11 PCF11 cleavage and polyadenylation factor subunit ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936498:11,307,644...11,333,692
Ensembl chrNW_004936498:11,307,568...11,337,596
JBrowse link
G Sympk symplekin scaffold protein ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936706:2,161,933...2,195,586
Ensembl chrNW_004936706:2,158,608...2,195,640
JBrowse link
G Wdr33 WD repeat domain 33 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936469:43,505,507...43,610,851
Ensembl chrNW_004936469:43,505,476...43,610,851
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 ISO RGD PMID:21957020 RGD:9681741 NCBI chrNW_004936620:4,069,956...4,145,212
Ensembl chrNW_004936620:4,069,934...4,145,745
JBrowse link
5'-end pre-mRNA capping pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncbp1 nuclear cap binding protein subunit 1 ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004936524:6,429,735...6,465,035
Ensembl chrNW_004936524:6,429,185...6,465,035
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004936833:920,683...928,047
Ensembl chrNW_004936833:920,674...928,047
JBrowse link
G Ramac RNA guanine-7 methyltransferase activating subunit ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004936483:17,634,873...17,643,740 JBrowse link
G Rngtt RNA guanylyltransferase and 5'-phosphatase ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004936510:3,186,552...3,405,862
Ensembl chrNW_004936510:3,186,506...3,406,159
JBrowse link
G Rnmt RNA guanine-7 methyltransferase ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004936626:3,132,781...3,156,252
Ensembl chrNW_004936626:3,132,772...3,153,920
JBrowse link
RNA polymerase II transcription elongation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aff1 ALF transcription elongation factor 1 ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004936920:43,047...227,452
Ensembl chrNW_004936920:43,338...227,522
JBrowse link
G Aff4 ALF transcription elongation factor 4 ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004936647:2,242,476...2,342,409
Ensembl chrNW_004936647:2,242,319...2,336,532
JBrowse link
G Ccnk cyclin K ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936604:3,283,996...3,316,516
Ensembl chrNW_004936604:3,283,715...3,319,572
JBrowse link
G Ccnt1 cyclin T1 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936512:6,567,663...6,588,107
Ensembl chrNW_004936512:6,562,974...6,588,409
JBrowse link
G Ccnt2 cyclin T2 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936469:40,799,428...40,837,462
Ensembl chrNW_004936469:40,803,819...40,837,433
JBrowse link
G Cdc73 cell division cycle 73 ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004936638:1,365,457...1,482,497
Ensembl chrNW_004936638:1,365,648...1,483,277
JBrowse link
G Cdk9 cyclin dependent kinase 9 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936487:15,446,864...15,450,750
Ensembl chrNW_004936487:15,446,858...15,452,796
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004936528:7,585,937...7,613,022
Ensembl chrNW_004936528:7,585,787...7,613,047
JBrowse link
G Eaf1 ELL associated factor 1 ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004936473:2,950,321...2,963,560
Ensembl chrNW_004936473:2,949,692...2,963,554
JBrowse link
G Eaf2 ELL associated factor 2 ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004936536:8,213,794...8,257,595
Ensembl chrNW_004936536:8,213,763...8,258,201
JBrowse link
G Ell elongation factor for RNA polymerase II ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004936596:2,745,862...2,812,513
Ensembl chrNW_004936596:2,745,825...2,812,880
JBrowse link
G Ell2 elongation factor for RNA polymerase II 2 ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004936523:7,399,426...7,470,895
Ensembl chrNW_004936523:7,399,421...7,473,158
JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004936471:6,835,410...6,838,582
Ensembl chrNW_004936471:6,835,930...6,838,544
JBrowse link
G Gtf2f1 general transcription factor IIF subunit 1 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936588:3,742,880...3,750,400
Ensembl chrNW_004936588:3,742,921...3,750,196
JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936791:1,244,224...1,390,659
Ensembl chrNW_004936791:1,244,186...1,391,205
JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004936471:13,753,061...13,783,990
Ensembl chrNW_004936471:13,753,030...13,784,049
JBrowse link
G Mllt1 MLLT1 super elongation complex subunit ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004936588:3,619,480...3,678,532
Ensembl chrNW_004936588:3,619,493...3,669,854
JBrowse link
G Mllt3 MLLT3 super elongation complex subunit ISO RGD PMID:22895430 RGD:9681740 NCBI chrNW_004936652:2,040,685...2,309,059
Ensembl chrNW_004936652:2,044,874...2,308,832
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004936524:6,429,735...6,465,035
Ensembl chrNW_004936524:6,429,185...6,465,035
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004936833:920,683...928,047
Ensembl chrNW_004936833:920,674...928,047
JBrowse link
G Nelfa negative elongation factor complex member A ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936477:21,442,493...21,459,999
Ensembl chrNW_004936477:21,442,380...21,464,005
JBrowse link
G Nelfb negative elongation factor complex member B ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936669:726,731...738,714
Ensembl chrNW_004936669:726,658...738,848
JBrowse link
G Nelfcd negative elongation factor complex member C/D ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936530:1,474,097...1,481,943
Ensembl chrNW_004936530:1,474,136...1,481,567
JBrowse link
G Nelfe negative elongation factor complex member E ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936727:1,589,942...1,596,009
Ensembl chrNW_004936727:1,589,942...1,598,182
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004936661:2,236,121...2,241,086
Ensembl chrNW_004936661:2,232,484...2,241,629
JBrowse link
G Rngtt RNA guanylyltransferase and 5'-phosphatase ISO RGD PMID:24354960 RGD:9684851 NCBI chrNW_004936510:3,186,552...3,405,862
Ensembl chrNW_004936510:3,186,506...3,406,159
JBrowse link
G Rtf1 RTF1 homolog, Paf1/RNA polymerase II complex component ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004936471:4,770,060...4,829,562
Ensembl chrNW_004936471:4,770,063...4,829,578
JBrowse link
G Skic8 SKI8 subunit of superkiller complex ISO RGD PMID:20060942 RGD:9588246 NCBI chrNW_004936471:36,704,236...36,723,675
Ensembl chrNW_004936471:36,704,160...36,723,669
JBrowse link
G Ssrp1 structure specific recognition protein 1 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936581:5,148,108...5,157,630
Ensembl chrNW_004936581:5,148,050...5,157,667
JBrowse link
G Supt16h SPT16 homolog, facilitates chromatin remodeling subunit ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936880:511,699...545,364
Ensembl chrNW_004936880:508,244...545,369
JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936490:4,744,307...4,751,043
Ensembl chrNW_004936490:4,744,443...4,749,868
JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936661:2,280,390...2,308,085
Ensembl chrNW_004936661:2,280,285...2,308,780
JBrowse link
G Tcea1 transcription elongation factor A1 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936496:877,311...918,191
Ensembl chrNW_004936496:877,773...918,175
JBrowse link
G Tcea2 transcription elongation factor A2 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936514:11,243,021...11,251,216
Ensembl chrNW_004936514:11,242,739...11,250,260
JBrowse link
G Tcea3 transcription elongation factor A3 ISO RGD PMID:24050178 RGD:9681735 NCBI chrNW_004936474:8,601,910...8,642,148
Ensembl chrNW_004936474:8,601,869...8,642,304
JBrowse link
RNA polymerase II transcription initiation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn7 ataxin 7 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936637:2,422,260...2,508,681
Ensembl chrNW_004936637:2,426,498...2,508,686
JBrowse link
G Atxn7l3 ataxin 7 like 3 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936541:657,196...663,967
Ensembl chrNW_004936541:657,196...663,903
JBrowse link
G Ccnh cyclin H ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004936469:5,933,163...5,952,190
Ensembl chrNW_004936469:5,935,131...5,952,460
JBrowse link
G Cdk7 cyclin dependent kinase 7 ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004936480:307,089...339,515
Ensembl chrNW_004936480:307,069...339,521
JBrowse link
G Dr1 down-regulator of transcription 1 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936537:5,835,774...5,853,509
Ensembl chrNW_004936537:5,835,774...5,853,515
JBrowse link
G Eny2 ENY2 transcription and export complex 2 subunit ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936470:35,634,650...35,649,683
Ensembl chrNW_004936470:35,639,024...35,649,725
JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004936706:1,816,561...1,829,638
Ensembl chrNW_004936706:1,816,571...1,829,692
JBrowse link
G Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004936469:43,970,002...43,998,279
Ensembl chrNW_004936469:43,969,740...43,998,448
JBrowse link
G Ercc5 ERCC excision repair 5, endonuclease ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004936472:8,209,482...8,234,696
Ensembl chrNW_004936472:8,209,540...8,234,334
JBrowse link
G Gtf2a1 general transcription factor IIA subunit 1 ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004936488:9,595,344...9,630,357
Ensembl chrNW_004936488:9,600,465...9,630,310
JBrowse link
G Gtf2a2 general transcription factor IIA subunit 2 ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004936471:20,636,997...20,651,986
Ensembl chrNW_004936471:20,636,202...20,652,013
JBrowse link
G Gtf2b general transcription factor IIB ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004936732:148,702...178,992
Ensembl chrNW_004936732:148,369...183,067
JBrowse link
G Gtf2e1 general transcription factor IIE subunit 1 ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004936536:7,418,087...7,445,993
Ensembl chrNW_004936536:7,422,334...7,445,949
JBrowse link
G Gtf2e2 general transcription factor IIE subunit 2 ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004936792:409,637...484,010
Ensembl chrNW_004936792:409,830...484,003
JBrowse link
G Gtf2f1 general transcription factor IIF subunit 1 ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004936588:3,742,880...3,750,400
Ensembl chrNW_004936588:3,742,921...3,750,196
JBrowse link
G Gtf2f2 general transcription factor IIF subunit 2 ISO RGD PMID:24120742 RGD:9681721 NCBI chrNW_004936791:1,244,224...1,390,659
Ensembl chrNW_004936791:1,244,186...1,391,205
JBrowse link
G Gtf2h1 general transcription factor IIH subunit 1 ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004936528:903,429...940,308
Ensembl chrNW_004936528:903,322...940,313
JBrowse link
G Gtf2h3 general transcription factor IIH subunit 3 ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004936558:1,176,154...1,196,028
Ensembl chrNW_004936558:1,173,064...1,196,063
JBrowse link
G Gtf2h4 general transcription factor IIH subunit 4 ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004936837:546,561...552,686
Ensembl chrNW_004936837:546,509...552,754
JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004936489:9,983,935...9,993,179
Ensembl chrNW_004936489:9,992,156...9,992,938
JBrowse link
G Hcfc2 host cell factor C2 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936492:10,390,603...10,426,232
Ensembl chrNW_004936492:10,390,268...10,426,206
JBrowse link
G Kat14 lysine acetyltransferase 14 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936485:1,992,894...2,031,632
Ensembl chrNW_004936485:1,955,924...2,031,650
JBrowse link
G Kat2a lysine acetyltransferase 2A ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936490:16,952,698...16,960,424
Ensembl chrNW_004936490:16,952,363...16,960,489
JBrowse link
G Kat2b lysine acetyltransferase 2B ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936473:12,341,545...12,415,637
Ensembl chrNW_004936473:12,344,343...12,417,875
JBrowse link
G Mbip MAP3K12 binding inhibitory protein 1 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936494:10,315,416...10,338,893
Ensembl chrNW_004936494:10,313,442...10,338,950
JBrowse link
G Mnat1 MNAT1 component of CDK activating kinase ISO RGD PMID:21592869 RGD:9681726 NCBI chrNW_004936495:4,909,427...5,128,113
Ensembl chrNW_004936495:4,909,380...5,128,113
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936559:220,941...222,783 JBrowse link
G Sgf29 SAGA complex associated factor 29 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936501:12,008,601...12,024,113
Ensembl chrNW_004936501:12,008,425...12,028,239
JBrowse link
G Supt20h SPT20 homolog, SAGA complex component ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936472:31,119,671...31,129,939 JBrowse link
G Supt3h SPT3 homolog, SAGA and STAGA complex component ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936476:14,857,428...15,336,145
Ensembl chrNW_004936476:14,866,970...15,334,893
JBrowse link
G Supt7l SPT7 like, STAGA complex subunit gamma ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936493:4,959,725...4,969,780
Ensembl chrNW_004936493:4,960,420...4,973,452
JBrowse link
G Tada1 transcriptional adaptor 1 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936481:19,031,207...19,046,057
Ensembl chrNW_004936481:19,031,207...19,046,062
JBrowse link
G Tada2a transcriptional adaptor 2A ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936490:873,675...924,582
Ensembl chrNW_004936490:872,945...924,614
JBrowse link
G Tada2b transcriptional adaptor 2B ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936477:18,876,132...18,878,760
Ensembl chrNW_004936477:18,877,501...18,878,529
JBrowse link
G Tada3 transcriptional adaptor 3 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936602:3,375,971...3,388,787
Ensembl chrNW_004936602:3,376,033...3,388,820
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004936762:189,710...271,759 JBrowse link
G Taf10 TATA-box binding protein associated factor 10 ISO RGD PMID:22426530 PMID:23146842 RGD:9681723 RGD:9681728 NCBI chrNW_004936842:667,960...669,367
Ensembl chrNW_004936842:667,936...669,441
JBrowse link
G Taf11 TATA-box binding protein associated factor 11 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004936476:24,272,406...24,285,577
Ensembl chrNW_004936476:24,271,895...24,285,612
JBrowse link
G Taf12 TATA-box binding protein associated factor 12 ISO RGD PMID:22426530 PMID:23146842 RGD:9681723 RGD:9681728 NCBI chrNW_004936474:12,695,508...12,719,384
Ensembl chrNW_004936474:12,693,018...12,720,136
JBrowse link
G Taf13 TATA-box binding protein associated factor 13 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004936704:613,261...623,407
Ensembl chrNW_004936704:613,261...623,401
JBrowse link
G Taf15 TATA-box binding protein associated factor 15 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004936490:199,226...230,190
Ensembl chrNW_004936490:199,201...230,244
JBrowse link
G Taf2 TATA-box binding protein associated factor 2 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004936470:26,871,865...26,951,804
Ensembl chrNW_004936470:26,871,847...26,951,806
JBrowse link
G Taf3 TATA-box binding protein associated factor 3 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004936484:6,834,935...7,002,167
Ensembl chrNW_004936484:6,834,103...7,002,198
JBrowse link
G Taf4 TATA-box binding protein associated factor 4 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004936514:9,694,509...9,722,101
Ensembl chrNW_004936514:9,694,509...9,722,107
JBrowse link
G Taf5 TATA-box binding protein associated factor 5 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004936600:2,683,045...2,700,272
Ensembl chrNW_004936600:2,679,807...2,700,274
JBrowse link
G Taf5l TATA-box binding protein associated factor 5 like ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936484:20,123,039...20,143,063
Ensembl chrNW_004936484:20,127,235...20,143,273
JBrowse link
G Taf6 TATA-box binding protein associated factor 6 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004936543:250,174...256,405
Ensembl chrNW_004936543:247,096...256,629
JBrowse link
G Taf6l TATA-box binding protein associated factor 6 like ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936581:504,700...519,826
Ensembl chrNW_004936581:504,742...516,737
JBrowse link
G Taf7 TATA-box binding protein associated factor 7 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004936504:12,824,928...12,827,238
Ensembl chrNW_004936504:12,824,953...12,827,214
JBrowse link
G Taf8 TATA-box binding protein associated factor 8 ISO RGD PMID:23146842 RGD:9681723 NCBI chrNW_004936476:17,779,474...17,798,465
Ensembl chrNW_004936476:17,779,242...17,798,505
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 ISO RGD PMID:22426530 PMID:23146842 RGD:9681723 RGD:9681728 NCBI chrNW_004936480:252,435...256,609
Ensembl chrNW_004936480:252,435...256,609
JBrowse link
G Tbp TATA-box binding protein ISO RGD PMID:23146842 PMID:24120742 RGD:9681721 RGD:9681723 NCBI chrNW_004937098:46,572...65,304
Ensembl chrNW_004937098:46,248...65,441
JBrowse link
G Trrap transformation/transcription domain associated protein ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936750:1,245,926...1,360,226
Ensembl chrNW_004936750:1,248,320...1,359,473
JBrowse link
G Usp22 ubiquitin specific peptidase 22 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936741:580,230...618,322
Ensembl chrNW_004936741:580,224...618,628
JBrowse link
G Wdr5 WD repeat domain 5 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936669:2,943,759...2,959,788
Ensembl chrNW_004936669:2,943,656...2,958,409
JBrowse link
G Yeats2 YEATS domain containing 2 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936578:6,004,427...6,075,414
Ensembl chrNW_004936578:6,006,018...6,075,449
JBrowse link
G Zzz3 zinc finger ZZ-type containing 3 ISO RGD PMID:22426530 RGD:9681728 NCBI chrNW_004936571:4,391,318...4,525,720
Ensembl chrNW_004936571:4,423,662...4,524,926
JBrowse link
RNA polymerase II transcription termination pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936581:4,870,126...4,873,158
Ensembl chrNW_004936581:4,869,686...4,873,217
JBrowse link
G Cpsf1 cleavage and polyadenylation specific factor 1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936470:7,848,846...7,857,291
Ensembl chrNW_004936470:7,849,329...7,857,214
JBrowse link
G Cpsf2 cleavage and polyadenylation specific factor 2 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936733:367,082...397,242
Ensembl chrNW_004936733:367,109...397,242
JBrowse link
G Cpsf3 cleavage and polyadenylation specific factor 3 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936532:5,814,331...5,850,188
Ensembl chrNW_004936532:5,814,329...5,850,352
JBrowse link
G Cpsf4 cleavage and polyadenylation specific factor 4 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936750:1,699,738...1,715,993
Ensembl chrNW_004936750:1,699,521...1,719,423
JBrowse link
G Cpsf6 cleavage and polyadenylation specific factor 6 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936545:7,045,043...7,077,710
Ensembl chrNW_004936545:7,045,043...7,077,736
JBrowse link
G Cpsf7 cleavage and polyadenylation specific factor 7 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936581:1,629,078...1,651,147
Ensembl chrNW_004936581:1,629,041...1,651,328
JBrowse link
G Cstf1 cleavage stimulation factor subunit 1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936875:310,491...319,027
Ensembl chrNW_004936875:310,442...320,085
JBrowse link
G Cstf2 cleavage stimulation factor subunit 2 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936584:6,042,785...6,066,758
Ensembl chrNW_004936584:6,040,336...6,066,703
JBrowse link
G Cstf2t cleavage stimulation factor subunit 2 tau variant ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936787:838,153...842,118
Ensembl chrNW_004936787:838,485...840,353
JBrowse link
G Cstf3 cleavage stimulation factor subunit 3 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936533:4,754,335...4,832,278
Ensembl chrNW_004936533:4,754,514...4,831,769
JBrowse link
G Dxo decapping exoribonuclease ISO RGD PMID:21957020 RGD:9681741 NCBI chrNW_004936727:1,576,823...1,579,158
Ensembl chrNW_004936727:1,576,886...1,579,154
JBrowse link
G Fip1l1 factor interacting with PAPOLA and CPSF1 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936482:16,126,608...16,194,729
Ensembl chrNW_004936482:16,126,536...16,193,962
JBrowse link
G Nudt21 nudix hydrolase 21 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936475:8,739,992...8,759,165
Ensembl chrNW_004936475:8,741,821...8,759,223
JBrowse link
G Pcf11 PCF11 cleavage and polyadenylation factor subunit ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936498:11,307,644...11,333,692
Ensembl chrNW_004936498:11,307,568...11,337,596
JBrowse link
G Sympk symplekin scaffold protein ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936706:2,161,933...2,195,586
Ensembl chrNW_004936706:2,158,608...2,195,640
JBrowse link
G Wdr33 WD repeat domain 33 ISO RGD PMID:21957020 PMID:24243805 RGD:9681741 RGD:9681742 NCBI chrNW_004936469:43,505,507...43,610,851
Ensembl chrNW_004936469:43,505,476...43,610,851
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 ISO RGD PMID:21957020 RGD:9681741 NCBI chrNW_004936620:4,069,956...4,145,212
Ensembl chrNW_004936620:4,069,934...4,145,745
JBrowse link
spliceosome pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aar2 AAR2 splicing factor ISO RGD PMID:23592432 RGD:9686090 NCBI chrNW_004936561:4,709,351...4,729,849
Ensembl chrNW_004936561:4,709,402...4,729,907
JBrowse link
G Aqr aquarius intron-binding spliceosomal factor ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936673:922,393...1,032,572
Ensembl chrNW_004936673:922,341...1,033,307
JBrowse link
G Bcas2 BCAS2 pre-mRNA processing factor ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936690:2,900,003...2,913,427
Ensembl chrNW_004936690:2,900,002...2,913,381
JBrowse link
G Bud31 BUD31 homolog ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936750:1,676,361...1,684,194
Ensembl chrNW_004936750:1,676,359...1,686,072
JBrowse link
G Ccdc12 coiled-coil domain containing 12 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936596:707,841...756,285
Ensembl chrNW_004936596:703,943...756,362
JBrowse link
G Cdc5l cell division cycle 5 like ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936476:15,647,470...15,698,095
Ensembl chrNW_004936476:15,648,678...15,698,106
JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936485:328,077...351,323
Ensembl chrNW_004936485:327,835...350,132
JBrowse link
G Ctnnbl1 catenin beta like 1 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936561:3,434,232...3,589,341
Ensembl chrNW_004936561:3,434,731...3,589,341
JBrowse link
G Cwc15 CWC15 spliceosome associated protein homolog ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936674:76,022...83,110
Ensembl chrNW_004936674:76,016...83,225
JBrowse link
G Ddx23 DEAD-box helicase 23 ISO RGD PMID:19239890 PMID:23454554 RGD:9686089 RGD:9686093 NCBI chrNW_004936512:6,666,972...6,682,596
Ensembl chrNW_004936512:6,666,814...6,682,728
JBrowse link
G Ddx39b DExD-box helicase 39B ISO RGD PMID:23454554 RGD:9686093 NCBI chrNW_004936727:1,968,032...1,980,789
Ensembl chrNW_004936727:1,968,094...1,980,785
JBrowse link
G Ddx42 DEAD-box helicase 42 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936541:4,418,743...4,462,513
Ensembl chrNW_004936541:4,429,657...4,465,099
JBrowse link
G Dhx15 DEAH-box helicase 15 ISO RGD PMID:23454554 RGD:9686093 NCBI chrNW_004936477:4,797,345...4,844,804 JBrowse link
G Dhx16 DEAH-box helicase 16 ISO RGD PMID:23454554 RGD:9686093 NCBI chrNW_004936837:324,244...341,667
Ensembl chrNW_004936837:324,243...341,713
JBrowse link
G Dhx38 DEAH-box helicase 38 ISO RGD PMID:23454554 RGD:9686093 NCBI chrNW_004936475:21,811,693...21,830,560
Ensembl chrNW_004936475:21,811,463...21,830,577
JBrowse link
G Dhx8 DEAH-box helicase 8 ISO RGD PMID:23454554 RGD:9686093 NCBI chrNW_004936541:85,273...122,161
Ensembl chrNW_004936541:85,252...123,040
JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 ISO RGD PMID:23454554 PMID:23592432 RGD:9686090 RGD:9686093 NCBI chrNW_004936541:1,216,584...1,259,355
Ensembl chrNW_004936541:1,217,138...1,257,935
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 ISO RGD PMID:15145352 RGD:9686404 NCBI chrNW_004936594:4,148,401...4,160,290
Ensembl chrNW_004936594:4,147,685...4,160,293
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936597:4,712,201...4,714,949 JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936512:11,481,017...11,487,737 JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936478:2,970,261...2,980,277
Ensembl chrNW_004936478:2,970,468...2,980,381
JBrowse link
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936509:6,576,933...6,585,734
Ensembl chrNW_004936509:6,577,001...6,581,934
JBrowse link
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936647:478,445...520,361
Ensembl chrNW_004936647:478,443...484,570
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936880:368,041...425,967 JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936738:2,096,370...2,115,135
Ensembl chrNW_004936738:2,096,370...2,113,604
JBrowse link
G Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936739:1,135,282...1,144,643
Ensembl chrNW_004936739:1,135,289...1,144,643
JBrowse link
G Hnrnph3 heterogeneous nuclear ribonucleoprotein H3 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936521:9,934,272...9,945,154
Ensembl chrNW_004936521:9,934,269...9,945,832
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936828:827,660...839,088
Ensembl chrNW_004936828:828,837...838,720
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936661:1,793,791...1,806,564
Ensembl chrNW_004936661:1,793,801...1,806,579
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936588:5,241,276...5,283,952
Ensembl chrNW_004936588:5,222,509...5,239,890
Ensembl chrNW_004936588:5,222,509...5,239,890
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936474:8,531,434...8,567,734
Ensembl chrNW_004936474:8,531,434...8,567,767
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936526:6,014,745...6,022,213 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936542:7,577,192...7,581,598
Ensembl chrNW_004936542:7,577,149...7,581,923
JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936727:1,746,072...1,751,944
Ensembl chrNW_004936727:1,745,942...1,751,959
JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936602:140,014...147,000
Ensembl chrNW_004936602:140,004...147,035
JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936596:2,903,363...2,916,629
Ensembl chrNW_004936596:2,903,358...2,916,629
JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936478:8,541,293...8,545,280
Ensembl chrNW_004936478:8,540,330...8,545,348
JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936535:3,089,778...3,103,342
Ensembl chrNW_004936535:3,089,779...3,103,310
JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936588:1,390,456...1,393,940
Ensembl chrNW_004936588:1,390,459...1,394,004
JBrowse link
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936589:1,107,534...1,113,439
Ensembl chrNW_004936589:1,105,341...1,113,452
JBrowse link
G Magohb mago homolog B, exon junction complex subunit ISO RGD PMID:15145352 RGD:9686404 NCBI chrNW_004937158:128,190...157,130 JBrowse link
G Mbnl1 muscleblind like splicing regulator 1 ISO RGD PMID:23498935 RGD:9686382 NCBI chrNW_004936519:419,332...580,706
Ensembl chrNW_004936519:419,571...580,730
JBrowse link
G Plrg1 pleiotropic regulator 1 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936576:1,284,758...1,297,758
Ensembl chrNW_004936576:1,282,664...1,297,818
JBrowse link
G Pnn pinin, desmosome associated protein ISO RGD PMID:15145352 RGD:9686404 NCBI chrNW_004936494:12,762,175...12,769,986 JBrowse link
G Ppie peptidylprolyl isomerase E ISO RGD PMID:18544344 PMID:23742842 RGD:9686094 RGD:9686376 NCBI chrNW_004936474:21,602,555...21,616,857
Ensembl chrNW_004936474:21,602,521...21,619,655
JBrowse link
G Ppig peptidylprolyl isomerase G ISO RGD PMID:18544344 RGD:9686376 NCBI chrNW_004936509:117,613...172,109
Ensembl chrNW_004936509:117,921...172,100
JBrowse link
G Ppih peptidylprolyl isomerase H ISO RGD PMID:18544344 RGD:9686376 NCBI chrNW_004936474:24,003,963...24,024,885
Ensembl chrNW_004936474:24,003,827...24,024,922
JBrowse link
G Ppil1 peptidylprolyl isomerase like 1 ISO RGD PMID:18544344 PMID:23742842 RGD:9686094 RGD:9686376 NCBI chrNW_004936476:22,552,484...22,570,860
Ensembl chrNW_004936476:22,552,566...22,571,001
JBrowse link
G Ppil2 peptidylprolyl isomerase like 2 ISO RGD PMID:18544344 RGD:9686376 NCBI chrNW_004936619:1,983,602...2,026,494
Ensembl chrNW_004936619:1,981,214...2,027,074
JBrowse link
G Ppil3 peptidylprolyl isomerase like 3 ISO RGD PMID:18544344 RGD:9686376 NCBI chrNW_004936726:181,128...194,823
Ensembl chrNW_004936726:181,140...194,821
JBrowse link
G Prpf18 pre-mRNA processing factor 18 ISO RGD PMID:24452469 RGD:9686092 NCBI chrNW_004936613:364,492...401,402
Ensembl chrNW_004936613:364,462...401,402
JBrowse link
G Prpf19 pre-mRNA processing factor 19 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936581:2,031,894...2,042,294
Ensembl chrNW_004936581:2,031,822...2,042,424
JBrowse link
G Prpf3 pre-mRNA processing factor 3 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004936580:604,709...632,788
Ensembl chrNW_004936580:605,138...633,104
JBrowse link
G Prpf31 pre-mRNA processing factor 31 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004936994:239,688...252,269
Ensembl chrNW_004936994:239,682...252,317
JBrowse link
G Prpf4 pre-mRNA splicing tri-snRNP complex factor PRPF4 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004936559:305,443...321,051
Ensembl chrNW_004936559:305,392...321,080
JBrowse link
G Prpf6 pre-mRNA processing factor 6 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004936514:11,175,410...11,220,928
Ensembl chrNW_004936514:11,175,526...11,220,241
JBrowse link
G Prpf8 pre-mRNA processing factor 8 ISO RGD PMID:23592432 RGD:9686090 NCBI chrNW_004936538:7,780,022...7,814,575
Ensembl chrNW_004936538:7,780,022...7,814,575
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO RGD PMID:23385723 RGD:9686381 NCBI chrNW_004936588:316,348...326,895
Ensembl chrNW_004936588:316,167...327,044
JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 ISO RGD PMID:23498935 RGD:9686382 NCBI chrNW_004936537:2,676,920...2,748,568
Ensembl chrNW_004936537:2,676,130...2,747,524
JBrowse link
G Qki QKI, KH domain containing RNA binding ISO RGD PMID:23385723 RGD:9686381 NCBI chrNW_004936489:13,901,066...14,000,652
Ensembl chrNW_004936489:13,901,754...13,999,983
JBrowse link
G Rbm22 RNA binding motif protein 22 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936504:4,294,010...4,304,669 JBrowse link
G Rbm8a RNA binding motif protein 8A ISO RGD PMID:15145352 RGD:9686404 NCBI chrNW_004936867:666,208...667,851
Ensembl chrNW_004936867:666,199...667,828
JBrowse link
G Rbmx RNA binding motif protein X-linked ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936513:10,429,862...10,442,509
Ensembl chrNW_004936513:10,429,824...10,437,108
JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 ISO RGD PMID:15145352 RGD:9686404 NCBI chrNW_004936694:1,784,396...1,794,269
Ensembl chrNW_004936694:1,784,480...1,793,481
JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein ISO RGD PMID:23592432 RGD:9686090 NCBI chrNW_004936769:450,919...490,938
Ensembl chrNW_004936769:450,917...491,210
JBrowse link
G Sf1 splicing factor 1 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004936599:4,533,664...4,546,857
Ensembl chrNW_004936599:4,533,795...4,546,853
JBrowse link
G Sf3a1 splicing factor 3a subunit 1 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936904:310,182...328,882
Ensembl chrNW_004936904:309,713...332,684
JBrowse link
G Sf3a2 splicing factor 3a subunit 2 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936588:1,335,143...1,342,573
Ensembl chrNW_004936588:1,335,166...1,342,575
JBrowse link
G Sf3a3 splicing factor 3a subunit 3 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936474:20,092,159...20,116,612
Ensembl chrNW_004936474:20,091,359...20,116,746
JBrowse link
G Sf3b1 splicing factor 3b subunit 1 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936506:1,749,591...1,790,860
Ensembl chrNW_004936506:1,749,563...1,791,739
JBrowse link
G Sf3b2 splicing factor 3b subunit 2 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936599:3,477,882...3,494,366
Ensembl chrNW_004936599:3,477,589...3,494,354
JBrowse link
G Sf3b3 splicing factor 3b subunit 3 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936475:23,038,424...23,086,134
Ensembl chrNW_004936475:23,037,687...23,086,188
JBrowse link
G Sf3b4 splicing factor 3b subunit 4 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936580:260,013...265,057 JBrowse link
G Sf3b5 splicing factor 3b subunit 5 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936625:2,151,018...2,151,743
Ensembl chrNW_004936625:2,151,153...2,151,413
JBrowse link
G Sf3b6 splicing factor 3b subunit 6 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936493:7,906,701...7,912,777
Ensembl chrNW_004936493:7,906,701...7,912,438
JBrowse link
G Slu7 SLU7 homolog, splicing factor ISO RGD PMID:24452469 RGD:9686092 NCBI chrNW_004936515:3,172,962...3,179,915
Ensembl chrNW_004936515:3,168,838...3,178,588
JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 ISO RGD PMID:23592432 RGD:9686090 NCBI chrNW_004936664:3,035,679...3,054,577 JBrowse link
G Snrpa small nuclear ribonucleoprotein polypeptide A ISO RGD PMID:23592432 RGD:9686090 NCBI chrNW_004936661:3,030,104...3,041,877
Ensembl chrNW_004936661:3,029,802...3,041,877
JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936483:2,572,520...2,582,297
Ensembl chrNW_004936483:2,572,491...2,582,492
JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936485:16,142,231...16,161,761
Ensembl chrNW_004936485:16,157,485...16,163,698
JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936485:3,296,350...3,305,985 JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C ISO RGD PMID:23592432 RGD:9686090 NCBI chrNW_004936476:24,371,268...24,389,355
Ensembl chrNW_004936476:24,368,521...24,389,596
JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936550:1,323,351...1,335,074
Ensembl chrNW_004936550:1,323,378...1,335,069
JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936706:2,065,315...2,068,709
Ensembl chrNW_004936706:2,065,419...2,067,487
JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936619:728,759...744,367
Ensembl chrNW_004936619:728,114...745,551
JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936567:849,300...855,214
Ensembl chrNW_004936567:849,397...855,187
JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936507:11,973,818...11,980,370
Ensembl chrNW_004936507:11,973,564...11,982,283
JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936491:14,442,904...14,450,717
Ensembl chrNW_004936491:14,443,026...14,450,631
JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004936492:289,834...295,883
Ensembl chrNW_004936492:289,770...297,670
JBrowse link
G Snw1 SNW domain containing 1 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936488:6,494,556...6,531,297
Ensembl chrNW_004936488:6,494,562...6,531,600
JBrowse link
G Srrm1 serine and arginine repetitive matrix 1 ISO RGD PMID:15145352 PMID:17537823 RGD:9686091 RGD:9686404 NCBI chrNW_004936474:9,573,015...9,602,229
Ensembl chrNW_004936474:9,572,974...9,602,229
JBrowse link
G Srrm2 serine/arginine repetitive matrix 2 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936694:1,280,104...1,296,301
Ensembl chrNW_004936694:1,280,155...1,295,779
JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 ISO RGD PMID:23498935 RGD:9686382 NCBI chrNW_004936668:1,523,232...1,668,591
Ensembl chrNW_004936668:1,525,289...1,562,064
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936490:5,055,258...5,059,118
Ensembl chrNW_004936490:5,055,253...5,059,116
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936474:9,068,012...9,079,717
Ensembl chrNW_004936474:9,066,103...9,079,780
JBrowse link
G Srsf11 serine and arginine rich splicing factor 11 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936591:1,789,358...1,825,854
Ensembl chrNW_004936591:1,789,366...1,816,342
JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936510:3,077,940...3,095,985
Ensembl chrNW_004936510:3,077,892...3,095,832
JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936594:1,775,412...1,778,389
Ensembl chrNW_004936594:1,777,376...1,778,164
JBrowse link
G Srsf3 serine and arginine rich splicing factor 3 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936476:22,790,411...22,799,498
Ensembl chrNW_004936476:22,790,411...22,799,452
JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936474:13,113,191...13,140,956
Ensembl chrNW_004936474:13,113,867...13,140,599
JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936495:12,952,610...12,957,640
Ensembl chrNW_004936495:12,952,646...12,960,681
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936530:3,086,944...3,092,780
Ensembl chrNW_004936530:3,086,680...3,092,828
JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936508:12,475,906...12,481,501
Ensembl chrNW_004936508:12,475,661...12,481,501
JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 ISO RGD PMID:17537823 PMID:19239890 RGD:9686089 RGD:9686091 NCBI chrNW_004936668:484,922...491,576
Ensembl chrNW_004936668:484,917...495,699
JBrowse link
G Syf2 SYF2 pre-mRNA splicing factor ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936474:9,970,047...9,975,260
Ensembl chrNW_004936474:9,968,469...9,972,799
JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein ISO RGD PMID:17537823 RGD:9686091 NCBI chrNW_004936510:5,643,072...5,672,258
Ensembl chrNW_004936510:5,643,044...5,672,255
JBrowse link
G Tial1 TIA1 cytotoxic granule associated RNA binding protein like 1 ISO RGD PMID:23385723 RGD:9686381 NCBI chrNW_004936486:8,925,819...8,947,872
Ensembl chrNW_004936486:8,924,738...8,947,877
JBrowse link
G Txnl4a thioredoxin like 4A ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004936616:220,255...232,042
Ensembl chrNW_004936616:220,274...234,870
JBrowse link
G U2af1 U2 small nuclear RNA auxiliary factor 1 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004936500:937,537...967,791
Ensembl chrNW_004936500:958,256...967,829
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 ISO RGD PMID:19239890 RGD:9686089 NCBI chrNW_004936981:176,552...193,798
Ensembl chrNW_004936981:176,647...193,152
JBrowse link
G Xab2 XPA binding protein 2 ISO RGD PMID:23742842 RGD:9686094 NCBI chrNW_004936588:4,670,866...4,679,888
Ensembl chrNW_004936588:4,670,841...4,679,965
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 3945
    regulatory pathway 2439
      pathway pertinent to DNA replication and repair, cell cycle, maintenance of genomic integrity, RNA and protein biosynthesis 1309
        transcription pathway 909
          RNA polymerase transcription pathway 343
            eukaryotic RNA polymerase transcription pathway 343
              RNA polymerase II transcription pathway 277
                RNA polymerase II transcription elongation pathway 35
                RNA polymerase II transcription initiation pathway 57
                RNA polymerase II transcription termination pathway 18
                lncRNA maturation pathway + 111
                mRNA maturation pathway + 138
paths to the root