PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: RNA polymerase II transcription pathway
Accession: PW:0000127
browse the term
Definition: The series of events governing the synthesis of protein-coding messenger RNA (mRNA) precursors and of transcripts of many classes of non-coding genes.
Synonyms: related_synonym: RNA Polymerase II Transcription; transcription by RNA polymerase II
View Interactive Diagram
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CCNC
cyclin C
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 6:97,383,290...97,410,068
Ensembl chr 6:101,265,499...101,292,233
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CDC14A
cell division cycle 14A
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chr 1:103,002,408...103,178,622
Ensembl chr 1:101,724,213...101,892,619
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CDC14B
cell division cycle 14B
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chr 9:67,596,037...67,715,668
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CDK12
cyclin dependent kinase 12
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chr17:17,721,266...17,826,521
Ensembl chr17:17,970,248...18,040,763
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CDK19
cyclin dependent kinase 19
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 6:108,413,832...108,619,053
Ensembl chr 6:112,483,434...112,686,987
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CDK7
cyclin dependent kinase 7
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chr 5:44,723,268...44,765,711
Ensembl chr 5:46,292,838...46,334,912
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CDK8
cyclin dependent kinase 8
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720 PMID:24088064
RGD:9681732 RGD:9681737 RGD:9681738
NCBI chr13:7,546,922...7,698,079
Ensembl chr13:25,895,705...26,046,120
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CDK9
cyclin dependent kinase 9
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chr 9:98,905,468...98,909,923
Ensembl chr 9:127,580,862...127,584,935
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CTDP1
CTD phosphatase subunit 1
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chr18:73,279,510...73,357,718
Ensembl chr18:76,646,641...76,722,573
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CTDSP1
CTD small phosphatase 1
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chr2B:105,658,394...105,664,571
Ensembl chr2B:224,254,460...224,262,000
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MED1
mediator complex subunit 1
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr17:17,836,350...17,883,610
Ensembl chr17:18,050,474...18,095,118
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MED10
mediator complex subunit 10
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 5:6,695,045...6,701,703
Ensembl chr 5:6,370,806...6,377,467
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MED11
mediator complex subunit 11
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr17:4,787,139...4,789,339
Ensembl chr17:4,777,157...4,779,403
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MED12
mediator complex subunit 12
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr X:60,386,820...60,410,730
Ensembl chr X:70,443,667...70,466,942
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MED12L
mediator complex subunit 12L
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 3:148,115,501...148,463,846
Ensembl chr 3:155,686,214...156,031,094
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MED13
mediator complex subunit 13
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr17:56,044,769...56,165,922
Ensembl chr17:61,157,691...61,274,505
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MED13L
mediator complex subunit 13L
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr12:113,531,181...113,850,854
Ensembl chr12:116,909,244...117,065,649
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MED14
mediator complex subunit 14
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr X:33,097,206...33,183,322
Ensembl chr X:40,798,363...40,886,270
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MED15
mediator complex subunit 15
ISO
RGD
PMID:24088064
RGD:9681732
Ensembl chr22:19,192,156...19,271,965
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MED16
mediator complex subunit 16
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr19:238,822...260,277
Ensembl chr19:841,367...863,080
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MED17
mediator complex subunit 17
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr11:88,806,209...88,835,138
Ensembl chr11:92,292,947...92,321,913
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MED18
mediator complex subunit 18
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 1:27,586,459...27,593,762
Ensembl chr 1:28,623,727...28,630,931
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MED19
mediator complex subunit 19
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr11:52,944,554...52,953,150
Ensembl chr11:56,415,721...56,423,475
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MED20
mediator complex subunit 20
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 6:41,489,079...41,504,572
Ensembl chr 6:42,790,975...42,806,538
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MED21
mediator complex subunit 21
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr12:59,283,334...59,291,008
Ensembl chr12:61,897,603...61,905,348
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MED22
mediator complex subunit 22
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 9:104,464,103...104,471,294
Ensembl chr 9:133,074,826...133,082,071
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MED23
mediator complex subunit 23
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 6:129,386,301...129,428,120
Ensembl chr 6:133,481,115...133,535,988
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MED24
mediator complex subunit 24
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr17:17,234,660...17,269,794
Ensembl chr17:17,456,137...17,489,992
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MED25
mediator complex subunit 25
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr19:46,831,190...46,853,367
Ensembl chr19:55,747,722...55,765,942
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MED26
mediator complex subunit 26
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr19:16,065,074...16,118,385
Ensembl chr19:17,043,523...17,051,832
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MED27
mediator complex subunit 27
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 9:102,982,174...103,199,512
Ensembl chr 9:131,619,441...131,835,951
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MED28
mediator complex subunit 28
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 4:12,035,441...12,051,718
Ensembl chr 4:17,328,975...17,348,546
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MED29
mediator complex subunit 29
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr19:36,489,459...36,498,838
Ensembl chr19:45,037,228...45,046,717
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MED30
mediator complex subunit 30
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 8:114,211,278...114,230,838
Ensembl chr 8:116,732,283...116,752,249
G
MED31
mediator complex subunit 31
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr17:6,681,675...6,689,115
Ensembl chr17:6,669,582...6,676,882
G
MED4
mediator complex subunit 4
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr13:29,227,620...29,247,082
Ensembl chr13:47,929,918...47,948,836
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MED6
mediator complex subunit 6
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr14:51,171,280...51,189,026
Ensembl chr14:70,038,686...70,058,469
G
MED7
mediator complex subunit 7
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 5:152,540,081...152,545,657
Ensembl chr 5:159,162,239...159,162,940
G
MED8
mediator complex subunit 8
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr 1:42,685,324...42,691,243
Ensembl chr 1:44,063,479...44,068,835
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MED9
mediator complex subunit 9
ISO
RGD
PMID:24088064
RGD:9681732
NCBI chr17:33,802,916...33,819,107
Ensembl chr17:38,749,397...38,765,618
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POLR2A
RNA polymerase II subunit A
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chr17:7,516,940...7,546,989
Ensembl chr17:7,502,807...7,532,521
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POLR2B
RNA polymerase II subunit B
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chr 4:66,888,215...66,940,702
Ensembl chr 4:73,462,000...73,514,985
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POLR2C
RNA polymerase II subunit C
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chr16:37,738,641...37,748,055
Ensembl chr16:56,871,707...56,880,102
G
POLR2D
RNA polymerase II subunit D
ISO
RGD
PMID:22960599
RGD:9588243
G
POLR2E
RNA polymerase II, I and III subunit E
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chr19:32,263...41,992
Ensembl chr19:1,065,421...1,073,379
G
POLR2F
RNA polymerase II, I and III subunit F
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chr22:18,868,872...18,988,918
Ensembl chr22:36,796,015...36,814,469
G
POLR2G
RNA polymerase II subunit G
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chr11:58,116,833...58,122,031
Ensembl chr11:61,470,866...61,476,073
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POLR2H
RNA polymerase II, I and III subunit H
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chr 3:181,399,136...181,405,680
Ensembl chr 3:189,881,594...189,887,608
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POLR2I
RNA polymerase II subunit I
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chr19:33,032,989...33,034,628
Ensembl chr19:41,780,125...41,781,764
G
POLR2K
RNA polymerase II, I and III subunit K
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chr 8:96,791,485...96,794,913
Ensembl chr 8:98,965,837...98,969,221
G
POLR2L
RNA polymerase II, I and III subunit L
ISO
RGD
PMID:22960599
RGD:9588243
NCBI chr11:859,015...861,382
G
RPAP2
RNA polymerase II associated protein 2
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chr 1:94,962,964...95,102,307
Ensembl chr 1:93,701,765...93,790,323
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SSU72
SSU72 homolog, RNA polymerase II CTD phosphatase
ISO
pol II carboxyl-terminal domain (CTD)
RGD
PMID:22622228 PMID:23837720
RGD:9681737 RGD:9681738
NCBI chr 1:301,984...335,634
Ensembl chr 1:1,463,184...1,494,797
G
CLP1
cleavage factor polyribonucleotide kinase subunit 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr11:52,898,181...52,902,656
Ensembl chr11:56,368,433...56,373,129
G
CPSF1
cleavage and polyadenylation specific factor 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr 8:141,158,494...141,176,354
Ensembl chr 8:144,148,075...144,166,043
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CPSF2
cleavage and polyadenylation specific factor 2
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr14:72,757,419...72,801,149
Ensembl chr14:92,099,301...92,140,470
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CPSF3
cleavage and polyadenylation specific factor 3
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr2A:9,413,517...9,462,758
Ensembl chr2A:9,576,871...9,626,193
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CPSF4
cleavage and polyadenylation specific factor 4
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr 7:91,412,008...91,430,452
Ensembl chr 7:104,914,077...104,932,769
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CPSF6
cleavage and polyadenylation specific factor 6
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr12:66,750,301...66,785,104
Ensembl chr12:69,535,302...69,550,789
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CPSF7
cleavage and polyadenylation specific factor 7
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr11:56,702,510...56,729,316
Ensembl chr11:60,065,832...60,092,720
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CSTF1
cleavage stimulation factor subunit 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr20:52,730,646...52,744,635
Ensembl chr20:54,017,435...54,033,230
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CSTF2
cleavage stimulation factor subunit 2
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr X:90,023,054...90,046,229
Ensembl chr X:100,161,749...100,182,304
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CSTF2T
cleavage stimulation factor subunit 2 tau variant
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr10:48,342,491...48,346,810
G
CSTF3
cleavage stimulation factor subunit 3
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr11:33,061,237...33,137,911
Ensembl chr11:32,945,934...33,021,885
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DXO
decapping exoribonuclease
ISO
RGD
PMID:21957020
RGD:9681741
NCBI chr 6:31,630,523...31,632,363
Ensembl chr 6:32,517,086...32,519,566
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FIP1L1
factor interacting with PAPOLA and CPSF1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr 4:70,495,627...70,579,059
Ensembl chr 4:77,050,858...77,133,003
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NUDT21
nudix hydrolase 21
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr16:36,715,373...36,737,593
Ensembl chr16:55,851,302...55,869,856
G
PABPN1
poly(A) binding protein nuclear 1
ISO
RGD
PMID:24243805
RGD:9681742
NCBI chr14:4,126,179...4,144,810
Ensembl chr14:22,220,986...22,239,403
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PAPOLA
poly(A) polymerase alpha
ISO
RGD
PMID:24243805
RGD:9681742
NCBI chr14:77,131,944...77,199,108
Ensembl chr14:96,454,378...96,518,038
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PAPOLB
poly(A) polymerase beta
ISO
RGD
PMID:24243805
RGD:9681742
NCBI chr 7:5,110,442...5,114,734
G
PAPOLG
poly(A) polymerase gamma
ISO
RGD
PMID:24243805
RGD:9681742
NCBI chr2A:60,846,593...60,892,462
Ensembl chr2A:61,988,572...62,030,291
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PCF11
PCF11 cleavage and polyadenylation factor subunit
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr11:78,220,710...78,249,276
Ensembl chr11:81,832,383...81,860,958
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SYMPK
symplekin scaffold protein
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr19:42,824,847...42,872,867
Ensembl chr19:51,361,502...51,410,212
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WDR33
WD repeat domain 33
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr2B:32,465,959...32,571,024
Ensembl chr2B:128,371,250...128,476,083
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XRN2
5'-3' exoribonuclease 2
ISO
RGD
PMID:21957020
RGD:9681741
NCBI chr20:21,260,871...21,347,430
Ensembl chr20:21,222,138...21,308,561
G
NCBP1
nuclear cap binding protein subunit 1
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chr 9:68,724,176...68,764,423
Ensembl chr 9:96,845,422...96,885,624
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NCBP2
nuclear cap binding protein subunit 2
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chr 3:194,277,280...194,284,456
Ensembl chr 3:204,214,282...204,221,294
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RAMAC
RNA guanine-7 methyltransferase activating subunit
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chr15:62,613,027...62,617,863
Ensembl chr15:80,876,487...80,881,337
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RNGTT
RNA guanylyltransferase and 5'-phosphatase
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chr 6:86,490,725...86,841,421
Ensembl chr 6:89,761,712...90,118,184
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RNMT
RNA guanine-7 methyltransferase
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chr18:560,744...598,216
Ensembl chr18:2,729,921...2,767,279
G
AFF1
ALF transcription elongation factor 1
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chr 4:79,197,196...79,443,485
Ensembl chr 4:89,969,675...90,166,160
G
AFF4
ALF transcription elongation factor 4
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chr 5:128,292,700...128,374,511
Ensembl chr 5:134,457,398...134,532,625
G
CCNK
cyclin K
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr14:80,105,372...80,136,511
Ensembl chr14:99,438,814...99,480,842
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CCNT1
cyclin T1
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr12:40,028,334...40,057,393
Ensembl chr12:40,906,907...40,935,392
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CCNT2
cyclin T2
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr2B:24,903,389...24,943,122
Ensembl chr2B:138,994,868...139,035,301
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CDC73
cell division cycle 73
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chr 1:168,581,730...168,710,915
Ensembl chr 1:172,875,365...173,004,934
G
CDK9
cyclin dependent kinase 9
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr 9:98,905,468...98,909,923
Ensembl chr 9:127,580,862...127,584,935
G
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chr11:10,884,353...10,913,246
Ensembl chr11:10,610,892...10,639,808
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EAF1
ELL associated factor 1
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chr 3:15,353,459...15,368,579
Ensembl chr 3:15,689,745...15,705,300
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EAF2
ELL associated factor 2
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chr 3:118,936,685...118,996,051
Ensembl chr 3:125,844,338...125,895,416
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ELL
elongation factor for RNA polymerase II
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chr19:17,923,035...17,999,842
Ensembl chr19:18,894,054...18,969,923
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ELL2
elongation factor for RNA polymerase II 2
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chr 5:19,387,443...19,464,150
Ensembl chr 5:19,533,442...19,610,079
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ELL3
elongation factor for RNA polymerase II 3
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chr15:22,732,742...22,737,522
Ensembl chr15:40,821,759...40,827,070
G
GTF2F1
general transcription factor IIF subunit 1
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr19:5,401,090...5,414,142
Ensembl chr19:6,323,780...6,336,215
G
GTF2F2
general transcription factor IIF subunit 2
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr13:26,286,305...26,452,302
Ensembl chr 3:197,619,461...197,784,798
G
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chr15:30,879,431...30,913,361
Ensembl chr15:49,208,132...49,241,055
G
MLLT1
MLLT1 super elongation complex subunit
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chr19:5,231,481...5,301,160
Ensembl chr19:6,156,365...6,216,779
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MLLT3
MLLT3 super elongation complex subunit
ISO
RGD
PMID:22895430
RGD:9681740
NCBI chr 9:20,140,160...20,417,327
Ensembl chr 9:20,800,393...21,073,046
G
NCBP1
nuclear cap binding protein subunit 1
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chr 9:68,724,176...68,764,423
Ensembl chr 9:96,845,422...96,885,624
G
NCBP2
nuclear cap binding protein subunit 2
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chr 3:194,277,280...194,284,456
Ensembl chr 3:204,214,282...204,221,294
G
NELFA
negative elongation factor complex member A
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr 4:2,119,699...2,147,618
Ensembl chr 4:2,027,939...2,054,669
G
NELFB
negative elongation factor complex member B
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr 9:108,314,535...108,333,050
Ensembl chr 9:137,278,964...137,301,751
G
NELFCD
negative elongation factor complex member C/D
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr20:55,332,309...55,346,167
Ensembl chr20:56,693,685...56,706,458
G
NELFE
negative elongation factor complex member E
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr 6:31,612,924...31,619,732
Ensembl chr 6:32,499,540...32,506,382
G
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chr19:36,484,099...36,489,364
Ensembl chr19:45,031,819...45,037,169
G
RNGTT
RNA guanylyltransferase and 5'-phosphatase
ISO
RGD
PMID:24354960
RGD:9684851
NCBI chr 6:86,490,725...86,841,421
Ensembl chr 6:89,761,712...90,118,184
G
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chr15:20,355,927...20,424,153
Ensembl chr15:38,599,163...38,662,100
G
SKIC8
SKI8 subunit of superkiller complex
ISO
RGD
PMID:20060942
RGD:9588246
NCBI chr15:57,204,199...57,229,052
Ensembl chr15:76,175,131...76,194,368
G
SSRP1
structure specific recognition protein 1
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr11:52,567,420...52,577,324
Ensembl chr 3:160,057,285...160,068,177
G
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr14:2,169,169...2,201,911
Ensembl chr14:20,247,325...20,280,074
G
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr17:52,420,503...52,427,514
G
SUPT5H
SPT5 homolog, DSIF elongation factor subunit
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr19:36,543,998...36,575,161
Ensembl chr19:45,092,075...45,122,335
G
TCEA1
transcription elongation factor A1
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr 8:50,393,553...50,449,698
Ensembl chr 8:47,770,661...47,825,804
G
TCEA2
transcription elongation factor A2
ISO
RGD
PMID:24050178
RGD:9681735
Ensembl chr20:61,976,869...61,986,592
G
TCEA3
transcription elongation factor A3
ISO
RGD
PMID:24050178
RGD:9681735
NCBI chr 1:22,573,050...22,617,426
Ensembl chr 1:23,560,258...23,602,792
G
ATXN7
ataxin 7
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 3:63,766,480...63,906,913
Ensembl chr 3:65,194,703...65,280,879
G
ATXN7L3
ataxin 7 like 3
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr17:13,197,939...13,206,017
Ensembl chr17:13,362,312...13,369,667
G
CCNH
cyclin H
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chr 5:27,958,859...27,995,815
Ensembl chr 5:28,094,064...28,116,149
G
CDK7
cyclin dependent kinase 7
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chr 5:44,723,268...44,765,711
Ensembl chr 5:46,292,838...46,334,912
G
DR1
down-regulator of transcription 1
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 1:96,014,758...96,031,402
Ensembl chr 1:94,746,109...94,762,736
G
ENY2
ENY2 transcription and export complex 2 subunit
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 8:105,985,043...105,996,686
Ensembl chr 8:108,129,883...108,141,478
G
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chr19:42,298,927...42,319,816
Ensembl chr19:50,897,004...50,915,819
G
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chr2B:32,983,492...33,020,492
Ensembl chr2B:127,922,483...127,959,372
G
ERCC5
ERCC excision repair 5, endonuclease
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chr13:84,005,950...84,036,710
Ensembl chr13:103,096,344...103,174,182
G
GTF2A1
general transcription factor IIA subunit 1
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chr14:61,751,492...61,797,083
Ensembl chr14:80,951,886...80,996,777
G
GTF2A2
general transcription factor IIA subunit 2
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chr15:38,608,360...38,627,156
Ensembl chr15:56,913,452...56,932,052
G
GTF2B
general transcription factor IIB
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chr 1:91,568,296...91,607,467
Ensembl chr 1:90,319,637...90,359,134
G
GTF2E1
general transcription factor IIE subunit 1
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chr 3:117,850,234...117,890,719
Ensembl chr 3:124,760,926...124,801,230
G
GTF2E2
general transcription factor IIE subunit 2
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chr 8:29,881,879...29,961,554
Ensembl chr 8:27,071,634...27,151,147
G
GTF2F1
general transcription factor IIF subunit 1
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chr19:5,401,090...5,414,142
Ensembl chr19:6,323,780...6,336,215
G
GTF2F2
general transcription factor IIF subunit 2
ISO
RGD
PMID:24120742
RGD:9681721
NCBI chr13:26,286,305...26,452,302
Ensembl chr 3:197,619,461...197,784,798
G
GTF2H1
general transcription factor IIH subunit 1
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chr11:18,357,594...18,402,268
Ensembl chr11:18,042,824...18,086,898
G
GTF2H3
general transcription factor IIH subunit 3
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chr12:121,218,813...121,246,807
Ensembl chr12:125,445,381...125,473,763
G
GTF2H4
general transcription factor IIH subunit 4
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chr 6:30,653,398...30,659,316
Ensembl chr 6:31,521,501...31,527,456
G
GTF2H5
general transcription factor IIH subunit 5
ISO
RGD
PMID:21592869
RGD:9681726
Ensembl chr 6:158,126,665...158,153,663
G
HCFC2
host cell factor C2
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr12:101,640,561...101,682,283
Ensembl chr12:105,036,716...105,074,532
G
KAT14
lysine acetyltransferase 14
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr20:18,106,400...18,152,231
Ensembl chr20:18,082,402...18,128,470
G
KAT2A
lysine acetyltransferase 2A
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr17:15,194,414...15,202,818
Ensembl chr17:15,416,075...15,424,197
G
KAT2B
lysine acetyltransferase 2B
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 3:19,956,067...20,070,637
Ensembl chr 3:20,286,865...20,400,770
G
MBIP
MAP3K12 binding inhibitory protein 1
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr14:17,052,270...17,074,609
Ensembl chr14:35,231,398...35,253,746
G
MNAT1
MNAT1 component of CDK activating kinase
ISO
RGD
PMID:21592869
RGD:9681726
NCBI chr14:41,342,530...41,576,690
Ensembl chr14:59,603,209...59,835,408
G
POLE3
DNA polymerase epsilon 3, accessory subunit
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 9:84,509,237...84,512,651
Ensembl chr 9:112,879,047...112,882,951
G
SGF29
SAGA complex associated factor 29
ISO
RGD
PMID:22426530
RGD:9681728
Ensembl chr16:29,030,587...29,068,795
G
SUPT20H
SPT20 homolog, SAGA complex component
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr13:18,217,142...18,268,937
Ensembl chr13:36,647,544...36,687,513
G
SUPT3H
SPT3 homolog, SAGA and STAGA complex component
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 6:44,406,978...44,960,039
G
SUPT7L
SPT7 like, STAGA complex subunit gamma
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr2A:27,648,724...27,661,760
Ensembl chr2A:27,734,763...27,747,802
G
TADA1
transcriptional adaptor 1
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 1:142,273,856...142,296,775
Ensembl chr 1:146,061,155...146,083,348
G
TADA2A
transcriptional adaptor 2A
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr17:19,595,055...19,670,090
Ensembl chr17:19,897,659...19,967,926
G
TADA2B
transcriptional adaptor 2B
ISO
RGD
PMID:22426530
RGD:9681728
Ensembl chr 4:7,110,732...7,125,100
G
TADA3
transcriptional adaptor 3
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 3:9,731,462...9,744,513
Ensembl chr 3:9,969,550...9,982,389
G
TAF1
TATA-box binding protein associated factor 1
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chr X:60,630,137...60,729,904
Ensembl chr X:70,684,217...70,782,323
G
TAF10
TATA-box binding protein associated factor 10
ISO
RGD
PMID:22426530 PMID:23146842
RGD:9681723 RGD:9681728
NCBI chr11:6,742,862...6,744,260
G
TAF11
TATA-box binding protein associated factor 11
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chr 6:34,439,369...34,449,501
Ensembl chr 6:35,536,614...35,546,805
G
TAF12
TATA-box binding protein associated factor 12
ISO
RGD
PMID:22426530 PMID:23146842
RGD:9681723 RGD:9681728
NCBI chr 1:27,874,675...27,914,672
G
TAF13
TATA-box binding protein associated factor 13
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chr 1:111,441,202...111,452,773
Ensembl chr 1:110,604,654...110,617,808
G
TAF15
TATA-box binding protein associated factor 15
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chr17:20,948,186...20,985,925
G
TAF2
TATA-box binding protein associated factor 2
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chr 8:116,421,520...116,523,138
Ensembl chr 8:119,170,327...119,271,405
G
TAF3
TATA-box binding protein associated factor 3
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chr10:7,851,294...8,047,100
G
TAF4
TATA-box binding protein associated factor 4
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chr20:58,341,086...58,431,623
G
TAF5
TATA-box binding protein associated factor 5
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chr10:99,965,537...99,986,955
Ensembl chr10:103,426,334...103,447,046
G
TAF5L
TATA-box binding protein associated factor 5 like
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 1:205,137,767...205,170,704
Ensembl chr 1:210,168,379...210,200,903
G
TAF6
TATA-box binding protein associated factor 6
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chr 7:92,142,646...92,154,951
Ensembl chr 7:105,575,861...105,588,142
G
TAF6L
TATA-box binding protein associated factor 6 like
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr11:58,126,480...58,142,752
Ensembl chr11:61,485,259...61,495,877
G
TAF7
TATA-box binding protein associated factor 7
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chr 5:136,680,554...136,682,862
G
TAF8
TATA-box binding protein associated factor 8
ISO
RGD
PMID:23146842
RGD:9681723
NCBI chr 6:41,631,483...41,672,988
Ensembl chr 6:42,933,107...42,978,271
G
TAF9
TATA-box binding protein associated factor 9
ISO
RGD
PMID:22426530 PMID:23146842
RGD:9681723 RGD:9681728
NCBI chr 5:44,630,503...44,635,760
G
TBP
TATA-box binding protein
ISO
RGD
PMID:23146842 PMID:24120742
RGD:9681721 RGD:9681723
NCBI chr 6:168,714,214...168,732,744
Ensembl chr 6:173,800,240...173,826,909
G
TRRAP
transformation/transcription domain associated protein
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 7:90,845,518...90,981,700
Ensembl chr 7:104,351,320...104,486,722
G
USP22
ubiquitin specific peptidase 22
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr17:30,606,845...30,650,281
Ensembl chr17:35,468,177...35,511,672
G
WDR5
WD repeat domain 5
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 9:105,241,415...105,265,925
Ensembl chr 9:133,848,185...133,872,889
G
YEATS2
YEATS domain containing 2
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 3:180,736,213...180,847,545
Ensembl chr 3:188,903,615...189,016,942
G
ZZZ3
zinc finger ZZ-type containing 3
ISO
RGD
PMID:22426530
RGD:9681728
NCBI chr 1:76,783,387...76,902,711
Ensembl chr 1:78,866,284...78,986,872
G
CLP1
cleavage factor polyribonucleotide kinase subunit 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr11:52,898,181...52,902,656
Ensembl chr11:56,368,433...56,373,129
G
CPSF1
cleavage and polyadenylation specific factor 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr 8:141,158,494...141,176,354
Ensembl chr 8:144,148,075...144,166,043
G
CPSF2
cleavage and polyadenylation specific factor 2
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr14:72,757,419...72,801,149
Ensembl chr14:92,099,301...92,140,470
G
CPSF3
cleavage and polyadenylation specific factor 3
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr2A:9,413,517...9,462,758
Ensembl chr2A:9,576,871...9,626,193
G
CPSF4
cleavage and polyadenylation specific factor 4
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr 7:91,412,008...91,430,452
Ensembl chr 7:104,914,077...104,932,769
G
CPSF6
cleavage and polyadenylation specific factor 6
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr12:66,750,301...66,785,104
Ensembl chr12:69,535,302...69,550,789
G
CPSF7
cleavage and polyadenylation specific factor 7
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr11:56,702,510...56,729,316
Ensembl chr11:60,065,832...60,092,720
G
CSTF1
cleavage stimulation factor subunit 1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr20:52,730,646...52,744,635
Ensembl chr20:54,017,435...54,033,230
G
CSTF2
cleavage stimulation factor subunit 2
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr X:90,023,054...90,046,229
Ensembl chr X:100,161,749...100,182,304
G
CSTF2T
cleavage stimulation factor subunit 2 tau variant
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr10:48,342,491...48,346,810
G
CSTF3
cleavage stimulation factor subunit 3
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr11:33,061,237...33,137,911
Ensembl chr11:32,945,934...33,021,885
G
DXO
decapping exoribonuclease
ISO
RGD
PMID:21957020
RGD:9681741
NCBI chr 6:31,630,523...31,632,363
Ensembl chr 6:32,517,086...32,519,566
G
FIP1L1
factor interacting with PAPOLA and CPSF1
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr 4:70,495,627...70,579,059
Ensembl chr 4:77,050,858...77,133,003
G
NUDT21
nudix hydrolase 21
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr16:36,715,373...36,737,593
Ensembl chr16:55,851,302...55,869,856
G
PCF11
PCF11 cleavage and polyadenylation factor subunit
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr11:78,220,710...78,249,276
Ensembl chr11:81,832,383...81,860,958
G
SYMPK
symplekin scaffold protein
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr19:42,824,847...42,872,867
Ensembl chr19:51,361,502...51,410,212
G
WDR33
WD repeat domain 33
ISO
RGD
PMID:21957020 PMID:24243805
RGD:9681741 RGD:9681742
NCBI chr2B:32,465,959...32,571,024
Ensembl chr2B:128,371,250...128,476,083
G
XRN2
5'-3' exoribonuclease 2
ISO
RGD
PMID:21957020
RGD:9681741
NCBI chr20:21,260,871...21,347,430
Ensembl chr20:21,222,138...21,308,561
G
AAR2
AAR2 splicing factor
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chr20:32,565,770...32,586,299
Ensembl chr20:33,685,529...33,705,953
G
AQR
aquarius intron-binding spliceosomal factor
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr15:13,774,234...13,891,046
Ensembl chr15:32,036,653...32,149,157
G
BCAS2
BCAS2 pre-mRNA processing factor
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr 1:87,972,721...87,986,819
Ensembl chr 1:123,024,910...123,039,068
G
BUD31
BUD31 homolog
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr 7:91,382,353...91,393,112
Ensembl chr 7:104,884,088...104,894,865
G
CCDC12
coiled-coil domain containing 12
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr 3:46,822,128...46,882,217
Ensembl chr 3:47,923,673...47,978,660
G
CDC5L
cell division cycle 5 like
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr 6:43,983,840...44,043,029
Ensembl chr 6:45,265,845...45,326,383
G
CRNKL1
crooked neck pre-mRNA splicing factor 1
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr20:19,992,092...20,010,809
Ensembl chr20:19,959,356...19,979,094
G
CTNNBL1
catenin beta like 1
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr20:34,015,883...34,192,958
Ensembl chr20:35,129,836...35,306,836
G
CWC15
CWC15 spliceosome associated protein homolog
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr11:89,977,104...89,987,495
Ensembl chr11:93,499,406...93,509,827
G
DDX23
DEAD-box helicase 23
ISO
RGD
PMID:19239890 PMID:23454554
RGD:9686089 RGD:9686093
NCBI chr12:39,896,354...39,917,195
Ensembl chr12:40,774,975...40,796,466
G
DDX39B
DExD-box helicase 39B
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chr 6:31,191,333...31,203,246
Ensembl chr 6:32,081,210...32,092,569
G
DDX42
DEAD-box helicase 42
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr17:57,854,197...57,898,820
Ensembl chr17:62,998,505...63,045,904
G
DDX46
DEAD-box helicase 46
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chr 5:130,185,793...130,232,208
Ensembl chr 5:136,302,356...136,375,992
G
DHX15
DEAH-box helicase 15
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chr 4:18,931,119...18,988,048
Ensembl chr 4:24,217,123...24,273,585
G
DHX16
DEAH-box helicase 16
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chr 6:30,397,774...30,417,758
Ensembl chr 6:31,267,669...31,287,435
G
DHX38
DEAH-box helicase 38
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chr16:52,872,164...52,891,165
Ensembl chr16:71,955,021...71,974,199
G
DHX8
DEAH-box helicase 8
ISO
RGD
PMID:23454554
RGD:9686093
NCBI chr17:13,870,392...13,913,290
Ensembl chr17:14,117,231...14,159,773
G
EFTUD2
elongation factor Tu GTP binding domain containing 2
ISO
RGD
PMID:23454554 PMID:23592432
RGD:9686090 RGD:9686093
NCBI chr17:12,423,198...12,472,462
Ensembl chr17:12,595,715...12,644,147
G
HNRNPA0
heterogeneous nuclear ribonucleoprotein A0
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 5:133,132,030...133,140,771
Ensembl chr 5:139,277,004...139,277,939
G
HNRNPA1
heterogeneous nuclear ribonucleoprotein A1
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr12:34,456,900...34,463,317
Ensembl chr12:35,184,943...35,188,443
G
HNRNPA2B1
heterogeneous nuclear ribonucleoprotein A2/B1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 7:26,835,881...26,846,578
Ensembl chr 7:26,439,443...26,449,985
G
HNRNPA3
heterogeneous nuclear ribonucleoprotein A3
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr2B:64,491,827...64,503,095
Ensembl chr2B:182,196,645...182,207,937
G
HNRNPAB
heterogeneous nuclear ribonucleoprotein A/B
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 5:173,364,301...173,370,974
G
HNRNPC
heterogeneous nuclear ribonucleoprotein C
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr14:2,022,280...2,083,215
G
HNRNPD
heterogeneous nuclear ribonucleoprotein D
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894
G
HNRNPH1
heterogeneous nuclear ribonucleoprotein H1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 5:174,764,771...174,775,201
Ensembl chr 5:182,044,549...182,053,635
G
HNRNPH3
heterogeneous nuclear ribonucleoprotein H3
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr10:64,816,143...64,827,354
Ensembl chr10:67,126,067...67,137,267
G
HNRNPK
heterogeneous nuclear ribonucleoprotein K
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr 9:40,898,593...40,911,159
Ensembl chr 9:83,324,238...83,336,756
G
HNRNPL
heterogeneous nuclear ribonucleoprotein L
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr19:35,943,720...35,959,795
G
HNRNPM
heterogeneous nuclear ribonucleoprotein M
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr19:7,731,828...7,776,101
Ensembl chr19:8,579,211...8,624,029
G
HNRNPR
heterogeneous nuclear ribonucleoprotein R
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 1:22,501,816...22,536,050
Ensembl chr 1:23,491,310...23,521,977
G
HNRNPU
heterogeneous nuclear ribonucleoprotein U
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr 1:220,450,218...220,461,412
Ensembl chr 1:225,817,899...225,842,031
G
HSPA8
heat shock protein family A (Hsp70) member 8
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773
G
ISY1
ISY1 splicing factor homolog
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr 3:126,187,354...126,219,355
Ensembl chr 3:133,545,726...133,575,974
G
LOC100988043
eukaryotic initiation factor 4A-III
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chr17:74,221,793...74,233,738
G
LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr 6:31,458,514...31,468,126
Ensembl chr 6:32,344,669...32,354,631
G
LSM3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr 3:14,097,035...14,165,942
Ensembl chr 3:14,437,497...14,456,726
G
LSM4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr19:17,785,580...17,801,866
Ensembl chr19:18,757,390...18,773,812
G
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr 7:33,094,545...33,104,489
G
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr 4:138,514,194...138,528,575
Ensembl chr 4:150,171,648...150,185,947
G
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr19:1,330,469...1,337,610
Ensembl chr19:2,302,280...2,313,255
G
LSM8
LSM8 homolog, U6 small nuclear RNA associated
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr 7:110,150,584...110,160,864
G
MAGOHB
mago homolog B, exon junction complex subunit
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chr12:10,632,174...10,639,758
Ensembl chr12:10,898,716...10,905,958
G
MBNL1
muscleblind like splicing regulator 1
ISO
RGD
PMID:23498935
RGD:9686382
NCBI chr 3:149,288,323...149,487,635
Ensembl chr 3:156,888,763...157,054,207
G
PLRG1
pleiotropic regulator 1
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr 4:146,900,494...146,917,016
Ensembl chr 4:158,719,568...158,735,103
G
PNN
pinin, desmosome associated protein
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chr14:19,945,185...19,952,922
Ensembl chr14:38,300,782...38,308,512
G
PPIE
peptidylprolyl isomerase E
ISO
RGD
PMID:18544344 PMID:23742842
RGD:9686094 RGD:9686376
NCBI chr 1:39,029,412...39,054,500
Ensembl chr 1:40,355,598...40,380,472
G
PPIG
peptidylprolyl isomerase G
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chr2B:56,854,219...56,911,325
Ensembl chr2B:174,322,828...174,379,281
G
PPIH
peptidylprolyl isomerase H
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chr 1:41,958,260...41,981,598
Ensembl chr 1:43,336,039...43,353,898
G
PPIL1
peptidylprolyl isomerase like 1
ISO
RGD
PMID:18544344 PMID:23742842
RGD:9686094 RGD:9686376
NCBI chr 6:36,417,086...36,437,259
Ensembl chr 6:37,612,724...37,632,942
G
PPIL2
peptidylprolyl isomerase like 2
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chr22:3,788,603...3,821,090
Ensembl chr22:20,272,383...20,304,130
G
PPIL3
peptidylprolyl isomerase like 3
ISO
RGD
PMID:18544344
RGD:9686376
NCBI chr2B:88,126,756...88,145,203
Ensembl chr2B:206,285,108...206,303,764
G
PRPF18
pre-mRNA processing factor 18
ISO
RGD
PMID:24452469
RGD:9686092
NCBI chr10:13,584,517...13,628,389
Ensembl chr10:13,915,943...13,959,830
G
PRPF19
pre-mRNA processing factor 19
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr11:56,153,965...56,169,821
Ensembl chr11:59,595,120...59,607,828
G
PRPF3
pre-mRNA processing factor 3
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chr 1:125,666,604...125,698,591
Ensembl chr 1:129,320,605...129,348,214
G
PRPF31
pre-mRNA processing factor 31
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chr19:51,048,133...51,064,394
Ensembl chr19:59,891,070...59,907,159
G
PRPF4
pre-mRNA splicing tri-snRNP complex factor PRPF4
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chr 9:84,373,457...84,390,622
Ensembl chr 9:112,745,455...112,763,725
G
PRPF6
pre-mRNA processing factor 6
ISO
RGD
PMID:19239890
RGD:9686089
Ensembl chr20:61,899,076...61,948,088
G
PRPF8
pre-mRNA processing factor 8
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chr17:1,635,991...1,669,703
Ensembl chr17:1,532,579...1,565,254
G
PTBP1
polypyrimidine tract binding protein 1
ISO
RGD
PMID:23385723
RGD:9686381
NCBI chr19:319,953...334,945
G
PTBP2
polypyrimidine tract binding protein 2
ISO
RGD
PMID:23498935
RGD:9686382
NCBI chr 1:99,382,924...99,474,053
Ensembl chr 1:98,105,913...98,196,723
G
QKI
QKI, KH domain containing RNA binding
ISO
RGD
PMID:23385723
RGD:9686381
NCBI chr 6:161,361,413...161,523,414
G
RBM22
RNA binding motif protein 22
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr 5:146,115,077...146,125,383
Ensembl chr 5:152,118,945...152,129,261
G
RBM8A
RNA binding motif protein 8A
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chr 1:121,830,424...121,836,378
Ensembl chr 1:113,834,110...113,839,429
G
RBMX
RNA binding motif protein X-linked
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr X:125,997,989...126,009,525
Ensembl chr X:136,264,406...136,275,360
G
RNPS1
RNA binding protein with serine rich domain 1
ISO
RGD
PMID:15145352
RGD:9686404
NCBI chr16:1,110,249...1,124,975
G
SART3
spliceosome associated factor 3, U4/U6 recycling protein
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chr12:106,093,738...106,132,710
Ensembl chr12:109,489,932...109,529,091
G
SF1
splicing factor 1
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chr11:60,120,126...60,134,279
Ensembl chr11:63,461,318...63,473,355
G
SF3A1
splicing factor 3a subunit 1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr22:11,369,772...11,392,998
Ensembl chr22:29,172,536...29,194,735
G
SF3A2
splicing factor 3a subunit 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr19:1,247,812...1,259,984
G
SF3A3
splicing factor 3a subunit 3
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 1:37,230,553...37,264,167
Ensembl chr 1:38,575,122...38,612,009
G
SF3B1
splicing factor 3b subunit 1
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr2B:84,633,272...84,678,602
Ensembl chr2B:202,530,200...202,573,346
G
SF3B2
splicing factor 3b subunit 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr11:61,416,764...61,433,334
Ensembl chr11:64,743,629...64,759,772
G
SF3B3
splicing factor 3b subunit 3
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr16:54,442,510...54,490,950
Ensembl chr16:70,361,068...70,410,042
G
SF3B4
splicing factor 3b subunit 4
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 1:125,268,113...125,273,405
Ensembl chr 1:128,924,317...128,929,610
G
SF3B5
splicing factor 3b subunit 5
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 6:141,873,848...141,874,584
Ensembl chr 6:146,594,201...146,594,461
G
SF3B6
splicing factor 3b subunit 6
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr2A:24,065,640...24,074,512
Ensembl chr2A:24,162,976...24,172,040
G
SLU7
SLU7 homolog, splicing factor
ISO
RGD
PMID:24452469
RGD:9686092
NCBI chr 5:155,792,494...155,810,474
Ensembl chr 5:162,486,743...162,504,316
G
SNRNP200
small nuclear ribonucleoprotein U5 subunit 200
ISO
RGD
PMID:23454554 PMID:23592432
RGD:9686090 RGD:9686093
NCBI chr2A:103,010,083...103,040,958
Ensembl chr2A:97,197,137...97,228,511
G
SNRNP70
small nuclear ribonucleoprotein U1 subunit 70
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chr19:46,094,679...46,118,022
Ensembl chr19:55,021,402...55,046,281
G
SNRPA
small nuclear ribonucleoprotein polypeptide A
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chr19:37,795,139...37,809,265
Ensembl chr19:46,302,198...46,316,593
G
SNRPA1
small nuclear ribonucleoprotein polypeptide A'
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr15:80,006,167...80,020,319
Ensembl chr15:99,289,668...99,303,839
G
SNRPB
small nuclear ribonucleoprotein polypeptides B and B1
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr20:2,571,393...2,580,642
Ensembl chr20:2,335,499...2,344,763
G
SNRPB2
small nuclear ribonucleoprotein polypeptide B2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr20:16,690,562...16,701,964
Ensembl chr20:16,670,826...16,682,418
G
SNRPC
small nuclear ribonucleoprotein polypeptide C
ISO
RGD
PMID:23592432
RGD:9686090
NCBI chr 6:34,324,127...34,340,526
Ensembl chr 6:35,421,467...35,437,622
G
SNRPD1
small nuclear ribonucleoprotein D1 polypeptide
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr18:14,851,041...14,869,042
Ensembl chr18:18,488,929...18,506,284
G
SNRPD2
small nuclear ribonucleoprotein D2 polypeptide
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr19:42,692,963...42,697,512
Ensembl chr19:51,230,822...51,235,661
G
SNRPD3
small nuclear ribonucleoprotein D3 polypeptide
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr22:5,361,886...5,378,465
Ensembl chr22:22,227,328...22,246,676
G
SNRPE
small nuclear ribonucleoprotein polypeptide E
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr 1:179,466,263...179,474,779
Ensembl chr 1:183,755,392...183,764,937
G
SNRPF
small nuclear ribonucleoprotein polypeptide F
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr12:93,452,446...93,459,691
Ensembl chr12:96,841,638...96,886,039
G
SNRPG
small nuclear ribonucleoprotein polypeptide G
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr2A:70,335,547...70,347,970
Ensembl chr2A:71,451,225...71,463,884
G
SNU13
small nuclear ribonucleoprotein 13
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chr22:22,567,285...22,582,257
Ensembl chr22:40,653,338...40,669,706
G
SNW1
SNW domain containing 1
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr14:58,271,830...58,315,773
Ensembl chr14:77,472,387...77,517,315
G
SRRM1
serine and arginine repetitive matrix 1
ISO
RGD
PMID:15145352 PMID:17537823
RGD:9686091 RGD:9686404
NCBI chr 1:23,844,303...23,874,333
Ensembl chr 1:24,821,565...24,850,997
G
SRRM2
serine/arginine repetitive matrix 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr16:1,612,386...1,631,177
Ensembl chr16:2,865,810...2,884,902
G
SRRM4
serine/arginine repetitive matrix 4
ISO
RGD
PMID:23498935
RGD:9686382
NCBI chr12:116,561,412...116,743,153
Ensembl chr12:120,060,023...120,117,181
G
SRSF1
serine and arginine rich splicing factor 1
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr17:52,083,676...52,087,454
Ensembl chr17:56,937,295...56,944,425
G
SRSF10
serine and arginine rich splicing factor 10
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr 1:23,170,078...23,184,030
Ensembl chr 1:24,149,428...24,165,057
G
SRSF11
serine and arginine rich splicing factor 11
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 1:69,441,043...69,488,427
Ensembl chr 1:71,442,600...71,471,361
G
SRSF12
serine and arginine rich splicing factor 12
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 6:86,968,446...86,990,507
Ensembl chr 6:90,244,345...90,258,152
G
SRSF2
serine and arginine rich splicing factor 2
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr17:70,809,931...70,813,191
Ensembl chr17:76,375,957...76,379,759
G
SRSF3
serine and arginine rich splicing factor 3
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr 6:36,157,321...36,165,896
Ensembl chr 6:37,352,484...37,362,195
G
SRSF4
serine and arginine rich splicing factor 4
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr 1:28,418,297...28,452,595
Ensembl chr 1:29,444,269...29,478,035
G
SRSF5
serine and arginine rich splicing factor 5
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr14:50,320,820...50,365,650
Ensembl chr14:69,230,730...69,236,596
G
SRSF6
serine and arginine rich splicing factor 6
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr20:39,795,659...39,801,864
Ensembl chr20:40,888,560...40,891,853
G
SRSF7
serine and arginine rich splicing factor 7
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr2A:38,780,879...38,787,470
Ensembl chr2A:39,536,731...39,545,562
G
SRSF9
serine and arginine rich splicing factor 9
ISO
RGD
PMID:17537823 PMID:19239890
RGD:9686089 RGD:9686091
NCBI chr12:118,043,325...118,052,107
Ensembl chr12:121,417,557...121,425,708
G
SYF2
SYF2 pre-mRNA splicing factor
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr 1:24,422,931...24,432,870
Ensembl chr 1:25,397,241...25,406,806
G
SYNCRIP
synaptotagmin binding cytoplasmic RNA interacting protein
ISO
RGD
PMID:17537823
RGD:9686091
NCBI chr 6:83,491,803...83,527,256
G
TIAL1
TIA1 cytotoxic granule associated RNA binding protein like 1
ISO
RGD
PMID:23385723
RGD:9686381
NCBI chr10:116,142,127...116,165,631
Ensembl chr10:119,561,786...119,585,157
G
TXNL4A
thioredoxin like 4A
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chr18:73,618,302...73,679,603
Ensembl chr18:76,937,460...76,952,428
G
U2AF1
U2 small nuclear RNA auxiliary factor 1
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chr21:29,399,601...29,414,156
Ensembl chr21:42,707,738...42,719,086
G
U2AF2
U2 small nuclear RNA auxiliary factor 2
ISO
RGD
PMID:19239890
RGD:9686089
NCBI chr19:52,701,314...52,721,612
Ensembl chr19:61,387,109...61,405,943
G
XAB2
XPA binding protein 2
ISO
RGD
PMID:23742842
RGD:9686094
NCBI chr19:6,909,281...6,919,332
Ensembl chr19:7,764,264...7,774,305
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all