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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:classic metabolic pathway
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Accession:PW:0000002 term browser browse the term
Definition:The various, enzyme-controlled, series of reactions allowing for the conversion of materials, energy availability and biodegradation of xenobiotics.
Comment:The definition was compiled based on a number of available defintions in various dictionaries.
Synonyms:related_synonym: Metabolism;   metabolic process


show annotations for term's descendants           Sort by:
acetylcholine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACHE acetylcholinesterase ISO rostral-caudal differences in Ache and Chat enzyme activities in the superior colliculus
activities of Ache and Chat varied considerably between different layers of the cerebellar vermis		 RGD PMID:126256 PMID:334962 PMID:4008917 PMID:6854006 RGD:2301195 RGD:2301197 RGD:2301199 RGD:2301203 NCBI chr 3:8,732,451...8,738,274
Ensembl chr 3:8,732,441...8,738,605 		JBrowse link
G CHAT choline O-acetyltransferase ISO rostral-caudal differences in Ache and Chat enzyme activities in the superior colliculus
activities of Ache and Chat varied considerably between different layers of the cerebellar vermis		 RGD PMID:126256 PMID:334962 PMID:4008917 PMID:6854006 RGD:2301195 RGD:2301197 RGD:2301199 RGD:2301203 NCBI chr14:90,117,464...90,167,611
Ensembl chr14:90,117,464...90,167,611 		JBrowse link
ADP-ribosylation pathway, cyclic ribosylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BST1 bone marrow stromal cell antigen 1 ISO RGD PMID:23576305 RGD:11250406 NCBI chr 8:11,011,131...11,043,622
Ensembl chr 8:11,011,241...11,047,541 		JBrowse link
G CD38 CD38 molecule ISO RGD PMID:23576305 RGD:11250406 NCBI chr 8:11,083,682...11,130,783
Ensembl chr 8:11,083,682...11,130,756 		JBrowse link
ADP-ribosylation pathway, mono and poly-ribosylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor ISO RGD PMID:26091342 RGD:11100038 NCBI chr 3:73,752,115...73,831,158
Ensembl chr 3:73,752,118...73,831,035 		JBrowse link
G CHFR checkpoint with forkhead and ring finger domains ISO RGD PMID:26091342 RGD:11100038 NCBI chr14:22,654,462...22,683,970
Ensembl chr14:22,654,481...22,683,966 		JBrowse link
G MACROD1 mono-ADP ribosylhydrolase 1 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 2:7,939,125...8,087,656
Ensembl chr 2:7,939,125...8,088,595 		JBrowse link
G MACROD2 mono-ADP ribosylhydrolase 2 ISO RGD PMID:26091342 RGD:11100038 NCBI chr17:22,635,105...24,686,846
Ensembl chr17:22,635,284...24,683,549 		JBrowse link
G OARD1 O-acyl-ADP-ribose deacylase 1 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 7:36,378,515...36,386,408
Ensembl chr 7:36,379,543...36,386,353 		JBrowse link
G PARG poly(ADP-ribose) glycohydrolase ISO RGD PMID:26091342 RGD:11100038 NCBI chr14:90,338,599...90,481,015
Ensembl chr14:90,338,510...90,480,989 		JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:26091342 RGD:11100038 NCBI chr10:14,203,157...14,241,164
Ensembl chr10:14,203,160...14,241,196 		JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 4:688,511...695,808 JBrowse link
G PARP11 poly(ADP-ribose) polymerase family member 11 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 5:66,443,483...66,483,630
Ensembl chr 5:66,443,494...66,483,626 		JBrowse link
G PARP12 poly(ADP-ribose) polymerase family member 12 ISO RGD PMID:26091342 RGD:11100038 NCBI chr18:9,673,841...9,715,169
Ensembl chr18:9,674,944...9,716,743 		JBrowse link
G PARP14 poly(ADP-ribose) polymerase family member 14 ISO RGD PMID:26091342 RGD:11100038 NCBI chr13:137,809,499...137,865,383
Ensembl chr13:137,809,510...137,865,106 		JBrowse link
G PARP15 poly(ADP-ribose) polymerase family member 15 ISO RGD PMID:26091342 RGD:11100038 NCBI chr13:137,882,179...137,936,389 JBrowse link
G PARP16 poly(ADP-ribose) polymerase family member 16 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 1:163,292,778...163,320,047
Ensembl chr 1:163,292,784...163,320,021 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 7:78,535,072...78,551,393
Ensembl chr 7:78,535,076...78,551,375 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 ISO RGD PMID:26091342 RGD:11100038 NCBI chr13:34,075,807...34,084,384
Ensembl chr13:34,076,012...34,085,210 		JBrowse link
G PARP4 poly(ADP-ribose) polymerase family member 4 ISO RGD PMID:26091342 RGD:11100038 NCBI chr11:359,503...432,224
Ensembl chr11:359,476...442,436 		JBrowse link
G PARP8 poly(ADP-ribose) polymerase family member 8 ISO RGD PMID:26091342 RGD:11100038 NCBI chr16:30,304,800...30,486,416
Ensembl chr16:30,305,738...30,486,414 		JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 ISO RGD PMID:26091342 RGD:11100038 NCBI chr13:137,960,987...138,000,862
Ensembl chr13:137,966,562...138,000,846 		JBrowse link
G RNF146 ring finger protein 146 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 1:35,909,789...35,927,265
Ensembl chr 1:35,909,575...35,926,968 		JBrowse link
G TIPARP TCDD inducible poly(ADP-ribose) polymerase ISO RGD PMID:26091342 RGD:11100038 NCBI chr13:96,496,386...96,524,879
Ensembl chr13:96,496,439...96,525,777 		JBrowse link
G TNKS tankyrase ISO RGD PMID:26091342 RGD:11100038 NCBI chr15:55,513,874...55,681,544
Ensembl chr15:55,514,248...55,681,505 		JBrowse link
G TNKS2 tankyrase 2 ISO RGD PMID:26091342 RGD:11100038 NCBI chr14:103,396,424...103,461,830
Ensembl chr14:103,396,459...103,461,821 		JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 ISO RGD PMID:26091342 RGD:11100038 NCBI chr18:10,529,805...10,588,913
Ensembl chr18:10,531,897...10,588,832 		JBrowse link
alanine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 ISO SMPDB SMP:00055 NCBI chr 6:13,298,336...13,321,423
Ensembl chr 6:13,298,330...13,321,383 		JBrowse link
G AARS2 alanyl-tRNA synthetase 2, mitochondrial ISO SMPDB SMP:00055 NCBI chr 7:39,301,020...39,314,296
Ensembl chr 7:39,301,009...39,313,860 		JBrowse link
G AGXT alanine--glyoxylate aminotransferase ISO SMPDB SMP:00055 NCBI chr15:139,720,648...139,730,737
Ensembl chr15:139,720,612...139,730,736 		JBrowse link
G PC pyruvate carboxylase ISO SMPDB SMP:00055 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,517...5,587,797 		JBrowse link
G PPP1R16A protein phosphatase 1 regulatory subunit 16A ISO SMPDB SMP:00055 NCBI chr 4:302,621...320,048
Ensembl chr 4:297,748...320,056 		JBrowse link
aldosterone biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:17926129 RGD:4892309 NCBI chr 7:59,172,829...59,188,479
Ensembl chr 7:59,175,758...59,188,478 		JBrowse link
G CYP21A1 cytochrome P450 family 21 subfamily A member 1 ISO RGD PMID:15583024 RGD:4889549 NCBI chr 7:24,086,138...24,089,364
Ensembl chr 7:24,086,218...24,089,370 		JBrowse link
G FDX1 ferredoxin 1 ISO RGD PMID:18821018 RGD:2325883 NCBI chr 9:38,376,147...38,399,026
Ensembl chr 9:38,375,984...38,404,832 		JBrowse link
G FDXR ferredoxin reductase ISO RGD PMID:18821018 RGD:2325883 NCBI chr12:6,372,224...6,382,769
Ensembl chr12:6,372,009...6,382,769 		JBrowse link
G POR cytochrome p450 oxidoreductase ISO RGD PMID:17926129 RGD:4892309 NCBI chr 3:10,212,734...10,272,184
Ensembl chr 3:10,212,735...10,281,823 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:18821018 RGD:2325883 NCBI chr15:48,377,597...48,385,398
Ensembl chr15:48,377,521...48,385,462 		JBrowse link
alpha-linolenic acid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELOVL4 ELOVL fatty acid elongase 4 ISO SMPDB SMP:00018 NCBI chr 1:86,163,845...86,196,036
Ensembl chr 1:86,163,868...86,195,987 		JBrowse link
G ELOVL5 ELOVL fatty acid elongase 5 ISO SMPDB SMP:00018 NCBI chr 7:46,860,768...46,932,945
Ensembl chr 7:46,860,770...46,932,926 		JBrowse link
G FADS1 fatty acid desaturase 1 ISO SMPDB SMP:00018 NCBI chr 2:9,735,425...9,747,405
Ensembl chr 2:9,735,322...9,750,506 		JBrowse link
G FADS2 fatty acid desaturase 2 ISO SMPDB SMP:00018 NCBI chr 2:9,633,941...9,666,666
Ensembl chr 2:9,629,423...9,735,576 		JBrowse link
G PLA2G4B phospholipase A2 group IVB ISO SMPDB SMP:00018 NCBI chr 1:129,514,801...129,524,365
Ensembl chr 1:129,514,346...129,524,313 		JBrowse link
altered citric acid cycle pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FH fumarate hydratase ISO RGD PMID:17211469 RGD:6907135 NCBI chr10:12,404,143...12,431,843
Ensembl chr10:12,404,176...12,431,824 		JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B ISO RGD PMID:21771581 RGD:6907134 NCBI chr 6:75,648,362...75,678,111
Ensembl chr 6:75,648,215...75,678,378 		JBrowse link
G SDHD succinate dehydrogenase complex subunit D ISO RGD PMID:21771581 RGD:6907134 NCBI chr 9:39,790,654...39,803,602
Ensembl chr 9:39,790,595...39,803,950 		JBrowse link
altered folate cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 7:53,748,585...53,794,777
Ensembl chr 7:53,748,653...53,794,706 		JBrowse link
G DHFR dihydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 2:89,230,660...89,255,830 JBrowse link
G FOLR1 folate receptor alpha ISO RGD PMID:22108709 RGD:7242557 NCBI chr 9:6,753,513...6,760,433
Ensembl chr 9:6,757,040...6,760,402 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22108709 RGD:7242557 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,228...74,270,783 		JBrowse link
G SLC46A1 solute carrier family 46 member 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr12:44,677,499...44,686,277
Ensembl chr12:44,677,502...44,686,250 		JBrowse link
altered folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO RGD PMID:22353665 RGD:7242562 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22353665 RGD:7242562 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763 		JBrowse link
altered galactose metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6PC1 glucose-6-phosphatase catalytic subunit 1 ISO RGD PMID:8865366 RGD:728661 NCBI chr12:19,965,885...19,975,783
Ensembl chr12:19,965,330...19,975,857 		JBrowse link
G HK2 hexokinase 2 ISO RGD PMID:7622509 RGD:632917 NCBI chr 3:68,155,656...68,231,187
Ensembl chr 3:68,153,835...68,231,615 		JBrowse link
altered lipoprotein metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 ISO RGD PMID:16011471 RGD:1578416 NCBI chr 9:44,216,481...44,218,360
Ensembl chr 9:44,216,392...44,218,713 		JBrowse link
G APOA4 apolipoprotein A4 ISO RGD PMID:16011471 RGD:1578416 NCBI chr 9:44,201,587...44,204,072
Ensembl chr 9:44,201,508...44,204,206 		JBrowse link
G APOB apolipoprotein B ISO RGD PMID:16011471 RGD:1578416 NCBI chr 3:117,250,096...117,316,200
Ensembl chr 3:117,250,096...117,316,200 		JBrowse link
G APOC2 apolipoprotein C2 ISO RGD PMID:10073946 RGD:1578471 NCBI chr 6:51,404,219...51,406,302 JBrowse link
G APOC3 apolipoprotein C3 ISO RGD PMID:10073946 RGD:1578471 NCBI chr 9:44,211,171...44,213,538
Ensembl chr 9:44,211,194...44,213,533 		JBrowse link
G APOE apolipoprotein E ISO RGD PMID:16011471 RGD:1578416 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,292...51,375,330 		JBrowse link
altered retinoid cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 4:123,202,720...123,333,044
Ensembl chr 4:123,202,753...123,331,144 		JBrowse link
G LRAT lecithin retinol acyltransferase ISO RGD PMID:20212494 RGD:8547536 NCBI chr 8:74,412,226...74,428,713
Ensembl chr 8:74,409,461...74,419,681 		JBrowse link
G RBP3 retinol binding protein 3 ISO RGD PMID:20212494 RGD:8547536 NCBI chr14:88,491,701...88,503,388
Ensembl chr14:88,490,013...88,504,510 		JBrowse link
G RDH12 retinol dehydrogenase 12 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 7:91,481,238...91,493,838
Ensembl chr 7:91,481,272...91,493,809 		JBrowse link
G RLBP1 retinaldehyde binding protein 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 7:54,783,965...54,800,008
Ensembl chr 7:54,776,113...54,889,014 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 6:144,206,078...144,229,471
Ensembl chr 6:144,206,078...144,229,467 		JBrowse link
altered reverse cholesterol transport pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 ISO RGD PMID:11086027 RGD:1600951 NCBI chr 1:246,144,277...246,278,492
Ensembl chr 1:246,144,277...246,278,492 		JBrowse link
amino sugar metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 ISO SMPDB SMP:00045 NCBI chr 3:39,523,076...39,532,590
Ensembl chr 3:39,522,163...39,532,995 		JBrowse link
G CHIT1 chitinase 1 ISO SMPDB SMP:00045 NCBI chr 9:113,927,715...113,941,445
Ensembl chr 9:113,927,720...113,941,433 		JBrowse link
G CMAS cytidine monophosphate N-acetylneuraminic acid synthetase ISO SMPDB SMP:00045 NCBI chr 5:51,438,175...51,458,531
Ensembl chr 5:51,438,020...51,458,615 		JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO SMPDB SMP:00045 NCBI chr 3:73,028,750...73,086,191
Ensembl chr 3:73,028,804...73,085,319 		JBrowse link
G GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase ISO SMPDB SMP:00045 NCBI chr 1:236,998,754...237,065,819
Ensembl chr 1:236,998,757...237,065,767 		JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 ISO SMPDB SMP:00045 NCBI chr 2:143,604,362...143,616,037
Ensembl chr 2:143,604,362...143,615,990 		JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO SMPDB SMP:00045 NCBI chr 1:182,404,460...182,423,453
Ensembl chr 1:182,407,229...182,423,441 		JBrowse link
G HEXA hexosaminidase subunit alpha ISO SMPDB SMP:00045 NCBI chr 7:60,878,531...60,911,537
Ensembl chr 7:60,878,284...60,913,339 		JBrowse link
G HK1 hexokinase 1 ISO SMPDB SMP:00045 NCBI chr14:72,383,328...72,460,927
Ensembl chr14:72,351,246...72,460,924 		JBrowse link
G NAGK N-acetylglucosamine kinase ISO SMPDB SMP:00045 NCBI chr 3:71,496,191...71,513,020
Ensembl chr 3:71,500,337...71,512,955 		JBrowse link
G NANP N-acetylneuraminic acid phosphatase ISO SMPDB SMP:00045 NCBI chr17:31,206,265...31,217,366
Ensembl chr17:31,208,181...31,217,310 		JBrowse link
G NANS N-acetylneuraminate synthase ISO SMPDB SMP:00045 NCBI chr 1:239,881,984...239,912,727
Ensembl chr 1:239,881,876...239,919,251 		JBrowse link
G NPL N-acetylneuraminate pyruvate lyase ISO SMPDB SMP:00045 NCBI chr 9:124,093,579...124,132,862
Ensembl chr 9:124,093,604...124,132,860 		JBrowse link
G PGM3 phosphoglucomutase 3 ISO SMPDB SMP:00045 NCBI chr 1:83,003,622...83,029,392
Ensembl chr 1:83,003,604...83,029,897 		JBrowse link
G RENBP renin binding protein ISO SMPDB SMP:00045 NCBI chr  X:124,662,957...124,670,522
Ensembl chr  X:124,662,719...124,672,235 		JBrowse link
G SLC17A5 solute carrier family 17 member 5 ISO SMPDB SMP:00045 NCBI chr 1:92,286,821...92,342,788
Ensembl chr 1:92,286,841...92,342,776 		JBrowse link
G UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 ISO SMPDB SMP:00045 NCBI chr 4:87,960,056...87,994,032
Ensembl chr 4:87,955,983...87,993,973 		JBrowse link
angiotensin (1-7) signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 ISO RGD PMID:10642323 PMID:15283675 RGD:1581953 RGD:1598433 NCBI chr12:15,394,487...15,414,609
Ensembl chr12:15,394,487...15,414,703 		JBrowse link
G ACE2 angiotensin converting enzyme 2 ISO RGD PMID:15638741 RGD:1581742 NCBI chr  X:12,099,849...12,152,204
Ensembl chr  X:12,093,242...12,151,286 		JBrowse link
G AGT angiotensinogen ISO RGD PMID:15951342 RGD:1581938 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G MAS1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:15951342 PMID:16520407 RGD:1581931 RGD:1581938 NCBI chr 1:7,527,566...7,542,110
Ensembl chr 1:7,527,861...7,528,838 		JBrowse link
G MME membrane metalloendopeptidase ISO RGD PMID:10642323 PMID:15638741 PMID:16520407 RGD:1581742 RGD:1581931 RGD:1581953 NCBI chr13:95,018,395...95,122,977
Ensembl chr13:95,019,081...95,126,045 		JBrowse link
angiotensin II signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 ISO RGD PMID:15638741 RGD:1581742 NCBI chr12:15,394,487...15,414,609
Ensembl chr12:15,394,487...15,414,703 		JBrowse link
G AGT angiotensinogen ISO RGD PMID:16141358 RGD:1581847 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:15590154 RGD:1579760 NCBI chr13:88,934,873...88,980,317
Ensembl chr13:88,934,868...88,983,105 		JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:14657020 RGD:1566502 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388 		JBrowse link
G CCL2 chemokine (C-C motif) ligand 2 ISO RGD PMID:14684844 RGD:1582323 NCBI chr12:40,798,109...40,800,013
Ensembl chr12:40,798,109...40,800,026 		JBrowse link
G JAK2 Janus kinase 2 ISO RGD PMID:16269269 RGD:1600094 NCBI chr 1:216,849,744...217,002,310
Ensembl chr 1:216,848,689...217,002,148 		JBrowse link
G OLR1 oxidized low density lipoprotein receptor 1 ISO RGD PMID:12661921 RGD:1580992 NCBI chr 5:61,799,356...61,809,691
Ensembl chr 5:61,799,286...61,810,624 		JBrowse link
G PDPK1 3-phosphoinositide dependent protein kinase 1 ISO RGD PMID:14585963 RGD:1581775 NCBI chr 3:39,429,928...39,512,623
Ensembl chr 3:39,432,058...39,512,601 		JBrowse link
G PLA2G6 phospholipase A2 group VI ISO RGD PMID:17613534 RGD:12910844 NCBI chr 5:9,713,809...9,777,921
Ensembl chr 5:9,713,873...9,777,918 		JBrowse link
G PRKCZ protein kinase C zeta ISO RGD PMID:16113073 RGD:1642674 NCBI chr 6:64,073,343...64,159,187
Ensembl chr 6:64,068,577...64,163,472 		JBrowse link
angiotensin II signaling pathway via AT1 receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:16141358 RGD:1581847 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:9287353 PMID:10977869 PMID:12446719 PMID:14559250 RGD:1581825 RGD:2316188 RGD:5133683 RGD:629553 NCBI chr13:88,934,873...88,980,317
Ensembl chr13:88,934,868...88,983,105 		JBrowse link
G AGTRAP angiotensin II receptor associated protein ISO RGD PMID:17875818 RGD:2314353 NCBI chr 6:71,825,319...71,836,812 JBrowse link
G ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 ISO RGD PMID:14559250 RGD:2316188 NCBI chr 9:7,238,043...7,301,085
Ensembl chr 9:7,233,911...7,301,073 		JBrowse link
G ARRB1 arrestin beta 1 ISO RGD PMID:16304060 RGD:5133417 NCBI chr 9:9,516,944...9,597,446
Ensembl chr 9:9,516,947...9,597,976 		JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:16304060 RGD:5133417 NCBI chr12:52,161,776...52,170,362
Ensembl chr12:52,161,778...52,170,342 		JBrowse link
G GNA11 G protein subunit alpha 11 ISO RGD PMID:16141358 RGD:1581847 NCBI chr 2:75,439,405...75,456,855
Ensembl chr 2:75,437,201...75,457,092 		JBrowse link
G GNAQ G protein subunit alpha q ISO RGD PMID:16141358 RGD:1581847 NCBI chr 1:230,607,469...230,906,988
Ensembl chr 1:230,605,265...230,907,674 		JBrowse link
G GRK2 G protein-coupled receptor kinase 2 ISO RGD PMID:16304060 RGD:5133417 NCBI chr 2:5,209,435...5,227,543
Ensembl chr 2:5,209,439...5,227,758 		JBrowse link
G GRK3 G protein-coupled receptor kinase 3 ISO RGD PMID:16304060 RGD:5133417 NCBI chr14:43,305,255...43,445,626
Ensembl chr14:43,224,930...43,442,965 		JBrowse link
G GRK5 G protein-coupled receptor kinase 5 ISO RGD PMID:16304060 RGD:5133417 NCBI chr14:129,113,933...129,351,135
Ensembl chr14:129,113,603...129,347,152 		JBrowse link
G GRK6 G protein-coupled receptor kinase 6 ISO RGD PMID:16304060 RGD:5133417 NCBI chr 2:80,496,105...80,527,208
Ensembl chr 2:80,508,979...80,527,210 		JBrowse link
G JAK2 Janus kinase 2 ISO RGD PMID:9287353 PMID:9314843 RGD:5133683 RGD:6478796 NCBI chr 1:216,849,744...217,002,310
Ensembl chr 1:216,848,689...217,002,148 		JBrowse link
G RGS2 regulator of G protein signaling 2 ISO RGD PMID:12588881 RGD:5133418 NCBI chr10:936,836...940,083
Ensembl chr10:936,789...940,098 		JBrowse link
G TYK2 tyrosine kinase 2 ISO RGD PMID:9314843 RGD:6478796 NCBI chr 2:69,157,774...69,183,555
Ensembl chr 2:69,157,811...69,183,456 		JBrowse link
angiotensin II signaling pathway via AT2 receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:16286564 PMID:16286568 PMID:22949090 RGD:1582434 RGD:1582435 RGD:7401256 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:10977869 PMID:22949090 RGD:1581825 RGD:7401256 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388 		JBrowse link
G CNKSR1 connector enhancer of kinase suppressor of Ras 1 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 6:83,598,363...83,608,617
Ensembl chr 6:83,598,372...83,608,607 		JBrowse link
G DUSP1 dual specificity phosphatase 1 ISO RGD PMID:18804122 RGD:5133675 NCBI chr16:51,457,924...51,461,095
Ensembl chr16:51,458,020...51,461,086 		JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 5:21,474,218...21,495,040
Ensembl chr 5:21,474,475...21,495,038 		JBrowse link
G GNAI2 G protein subunit alpha i2 ISO RGD PMID:22949090 RGD:7401256 NCBI chr13:32,705,326...32,733,804
Ensembl chr13:32,705,321...32,733,794 		JBrowse link
G GNAI3 G protein subunit alpha i3 ISO RGD PMID:22949090 RGD:7401256 NCBI chr 4:110,527,363...110,579,331
Ensembl chr 4:110,525,546...110,579,053 		JBrowse link
G MTUS1 microtubule associated scaffold protein 1 ISO RGD PMID:20889352 RGD:5133679 NCBI chr17:5,331,668...5,507,212
Ensembl chr17:5,329,750...5,507,119 		JBrowse link
G PTPN6 protein tyrosine phosphatase non-receptor type 6 ISO RGD PMID:18804122 RGD:5133675 NCBI chr 5:63,762,109...63,779,086
Ensembl chr 5:63,762,112...63,808,350 		JBrowse link
G SLC9A6 solute carrier family 9 member A6 ISO RGD PMID:20889352 RGD:5133679 NCBI chr  X:111,176,461...111,233,108
Ensembl chr  X:111,176,495...111,233,099 		JBrowse link
G TIMP3 TIMP metallopeptidase inhibitor 3 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 5:12,185,816...12,242,599
Ensembl chr 5:12,185,818...12,242,581 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742 		JBrowse link
angiotensin III signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11295571 RGD:1582124 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:11295571 RGD:1582124 NCBI chr13:88,934,873...88,980,317
Ensembl chr13:88,934,868...88,983,105 		JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:11295571 RGD:1582124 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388 		JBrowse link
G ENPEP glutamyl aminopeptidase ISO RGD PMID:15638741 PMID:16537183 RGD:1581649 RGD:1581742 NCBI chr 8:111,765,839...111,858,349
Ensembl chr 8:111,748,514...111,858,510 		JBrowse link
angiotensin III signaling pathway via AT1 receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11100981 RGD:1582152 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:11100981 RGD:1582152 NCBI chr13:88,934,873...88,980,317
Ensembl chr13:88,934,868...88,983,105 		JBrowse link
angiotensin III signaling pathway via AT2 receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:16380540 RGD:1582118 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:16380540 RGD:1582118 NCBI chr  X:95,267,709...95,272,237
Ensembl chr  X:95,269,300...95,270,388 		JBrowse link
angiotensin IV signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11282364 RGD:1582105 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
G ANPEP alanyl aminopeptidase, membrane ISO RGD PMID:15638741 PMID:16537183 RGD:1581649 RGD:1581742 NCBI chr 7:55,351,081...55,373,856
Ensembl chr 7:55,351,087...55,373,881 		JBrowse link
G LNPEP leucyl and cystinyl aminopeptidase ISO RGD PMID:11282364 PMID:12591177 RGD:1581864 RGD:1582105 NCBI chr 2:103,568,366...103,659,589
Ensembl chr 2:103,567,602...103,661,070 		JBrowse link
G RNPEP arginyl aminopeptidase ISO RGD PMID:16537183 RGD:1581649 NCBI chr10:24,218,144...24,235,520
Ensembl chr10:24,218,139...24,235,518 		JBrowse link
angiotensin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:12676165 RGD:1566511 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,656,833 		JBrowse link
arachidonic acid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1C1 aldo-keto reductase family 1, member C1 ISO SMPDB SMP:00075 NCBI chr10:65,580,297...65,594,998
Ensembl chr10:65,576,464...65,678,248 		JBrowse link
G ALOX12 arachidonate 12-lipoxygenase, 12S type ISO SMPDB SMP:00075 NCBI chr12:52,401,861...52,414,913
Ensembl chr12:52,401,810...52,414,903 		JBrowse link
G ALOX12B arachidonate 12-lipoxygenase, 12R type ISO SMPDB SMP:00075 NCBI chr12:53,292,530...53,302,850
Ensembl chr12:53,292,526...53,302,993 		JBrowse link
G ALOX15 arachidonate 15-lipoxygenase ISO SMPDB SMP:00075 NCBI chr12:52,287,174...52,295,873
Ensembl chr12:52,287,160...52,295,871 		JBrowse link
G ALOX15B arachidonate 15-lipoxygenase type B ISO SMPDB SMP:00075 NCBI chr12:53,259,867...53,281,127
Ensembl chr12:53,271,583...53,281,123 		JBrowse link
G ALOX5 arachidonate 5-lipoxygenase ISO SMPDB SMP:00075 NCBI chr14:90,859,209...90,907,084
Ensembl chr14:90,859,016...90,907,094 		JBrowse link
G CYP2B6B cytochrome P450 family 2 subfamily B member 6B ISO SMPDB SMP:00075 NCBI chr 6:49,158,175...49,173,872
Ensembl chr 6:49,110,812...49,178,334 		JBrowse link
G CYP2E1 cytochrome P450 family 2 subfamily E member 1 ISO SMPDB SMP:00075 NCBI chr14:141,690,737...141,703,078
Ensembl chr14:141,690,426...141,736,817 		JBrowse link
G CYP2U1 cytochrome P450 family 2 subfamily U member 1 ISO SMPDB SMP:00075 NCBI chr 8:114,016,915...114,035,905
Ensembl chr 8:114,011,304...114,035,357 		JBrowse link
G EPHX2 epoxide hydrolase 2 ISO SMPDB SMP:00075 NCBI chr14:11,217,125...11,293,018
Ensembl chr14:11,216,978...11,293,410 		JBrowse link
G GPX1 glutathione peroxidase 1 ISO SMPDB SMP:00075 NCBI chr13:31,916,269...31,917,337
Ensembl chr13:31,916,246...31,917,433 		JBrowse link
G LOC110255237 cytochrome P450 4F6-like ISO SMPDB SMP:00075 NCBI chr 2:61,893,963...61,917,944
Ensembl chr 2:61,889,495...61,917,929 		JBrowse link
G LOC110256483 carbonyl reductase [NADPH] 1-like ISO SMPDB SMP:00075 NCBI chr13:199,713,741...199,719,535 JBrowse link
G LOC110259329 docosahexaenoic acid omega-hydroxylase CYP4F3-like ISO SMPDB SMP:00075 NCBI chr 2:61,863,378...61,884,717
Ensembl chr 2:61,864,575...61,984,903 		JBrowse link
G LOC110261221 cytochrome P450 2J2-like ISO SMPDB SMP:00075 NCBI chr 6:152,321,816...152,358,179
Ensembl chr 6:152,321,848...152,648,979 		JBrowse link
G LTA4H leukotriene A4 hydrolase ISO SMPDB SMP:00075 NCBI chr 5:87,486,552...87,518,520
Ensembl chr 5:87,486,512...87,518,515 		JBrowse link
G LTC4S leukotriene C4 synthase ISO SMPDB SMP:00075 NCBI chr 2:78,799,446...78,802,281
Ensembl chr 2:78,799,449...78,802,285 		JBrowse link
G PLA2G4B phospholipase A2 group IVB ISO SMPDB SMP:00075 NCBI chr 1:129,514,801...129,524,365
Ensembl chr 1:129,514,346...129,524,313 		JBrowse link
G PRXL2B peroxiredoxin like 2B ISO SMPDB SMP:00075 NCBI chr 6:64,432,187...64,435,328
Ensembl chr 6:64,432,148...64,435,320 		JBrowse link
G PTGDS prostaglandin D2 synthase ISO SMPDB SMP:00075
G PTGES prostaglandin E synthase ISO SMPDB SMP:00075 NCBI chr 1:269,911,785...269,924,481
Ensembl chr 1:269,911,789...269,924,462 		JBrowse link
G PTGIS prostaglandin I2 synthase ISO SMPDB SMP:00075 NCBI chr17:51,153,151...51,200,515
Ensembl chr17:51,153,154...51,200,300 		JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 ISO SMPDB SMP:00075 NCBI chr 1:262,456,106...262,482,159
Ensembl chr 1:262,456,155...262,483,035 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO SMPDB SMP:00075 NCBI chr 9:127,850,164...127,858,866
Ensembl chr 9:127,850,015...127,858,884 		JBrowse link
G TBXAS1 thromboxane A synthase 1 ISO SMPDB SMP:00075 NCBI chr18:9,717,291...9,886,699
Ensembl chr18:9,717,294...9,886,681 		JBrowse link
arginine and proline metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 ISO SMPDB SMP:00020 NCBI chr 6:77,373,999...77,404,015
Ensembl chr 6:77,374,002...77,404,036 		JBrowse link
G ARG1 arginase 1 ISO SMPDB SMP:00020 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,046...32,028,988 		JBrowse link
G ASL argininosuccinate lyase ISO SMPDB SMP:00020 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,867 		JBrowse link
G ASS1 argininosuccinate synthase 1 ISO SMPDB SMP:00020 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,364 		JBrowse link
G CKB creatine kinase B ISO SMPDB SMP:00020
G CPS1 carbamoyl-phosphate synthase 1 ISO SMPDB SMP:00020 NCBI chr15:113,210,038...113,339,086
Ensembl chr15:113,150,157...113,339,078 		JBrowse link
G DAO D-amino acid oxidase ISO SMPDB SMP:00020 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,931,541...41,950,633 		JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 ISO SMPDB SMP:00020 NCBI chr10:9,579,301...9,648,416
Ensembl chr10:9,579,304...9,648,414 		JBrowse link
G GAMT guanidinoacetate N-methyltransferase ISO SMPDB SMP:00020 NCBI chr 2:77,076,566...77,079,751
Ensembl chr 2:77,076,566...77,079,759 		JBrowse link
G GATM glycine amidinotransferase ISO SMPDB SMP:00020 NCBI chr 1:126,361,968...126,378,705
Ensembl chr 1:126,361,945...126,380,871 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 ISO SMPDB SMP:00020 NCBI chr14:87,968,850...88,005,375
Ensembl chr14:87,968,850...88,005,520 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO SMPDB SMP:00020 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874 		JBrowse link
G LOC110256626 proline dehydrogenase 1, mitochondrial ISO SMPDB SMP:00020 NCBI chr14:51,624,919...51,644,467 JBrowse link
G NOS1 nitric oxide synthase 1 ISO SMPDB SMP:00020 NCBI chr14:35,112,898...35,299,297
Ensembl chr14:35,113,184...35,295,944 		JBrowse link
G OAT ornithine aminotransferase ISO SMPDB SMP:00020 NCBI chr14:133,808,193...133,830,517 JBrowse link
G OTC ornithine transcarbamylase ISO SMPDB SMP:00020 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,821 		JBrowse link
G P4HA3 prolyl 4-hydroxylase subunit alpha 3 ISO SMPDB SMP:00020 NCBI chr 9:8,627,365...8,681,804
Ensembl chr 9:8,627,413...8,667,772 		JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 ISO SMPDB SMP:00020 NCBI chr10:13,841,755...13,845,900
Ensembl chr10:13,838,085...13,845,894 		JBrowse link
G RARS2 arginyl-tRNA synthetase 2, mitochondrial ISO SMPDB SMP:00020 NCBI chr 1:55,906,508...55,982,094
Ensembl chr 1:55,893,480...55,982,068 		JBrowse link
G SLC25A15 solute carrier family 25 member 15 ISO SMPDB SMP:00020 NCBI chr11:15,494,176...15,551,172
Ensembl chr11:15,494,385...15,559,312 		JBrowse link
aryl hydrocarbon receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor ISO RGD PMID:10639156 RGD:1300277 NCBI chr 9:86,511,866...86,555,950
Ensembl chr 9:86,511,369...86,555,943 		JBrowse link
G ARNT aryl hydrocarbon receptor nuclear translocator ISO RGD PMID:1317062 RGD:41410437 NCBI chr 4:98,333,431...98,390,012
Ensembl chr 4:98,333,459...98,389,457 		JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 ISO RGD PMID:12859947 RGD:631760 NCBI chr 7:49,259,118...49,450,471
Ensembl chr 7:49,259,651...49,450,461 		JBrowse link
beta-alanine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO SMPDB SMP:00007 NCBI chr 3:33,913,068...33,960,804
Ensembl chr 3:33,908,970...34,015,474 		JBrowse link
G ALDH2 aldehyde dehydrogenase 2 family member ISO SMPDB SMP:00007 NCBI chr14:39,902,317...39,933,113
Ensembl chr14:39,896,565...39,933,124 		JBrowse link
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 ISO SMPDB SMP:00007 NCBI chr 7:97,360,583...97,381,885
Ensembl chr 7:97,360,610...97,381,830 		JBrowse link
G CNDP1 carnosine dipeptidase 1 ISO SMPDB SMP:00007 NCBI chr 1:149,523,983...149,564,728
Ensembl chr 1:149,521,510...149,562,623 		JBrowse link
G DPYD dihydropyrimidine dehydrogenase ISO SMPDB SMP:00007 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,414...120,712,459 		JBrowse link
G DPYS dihydropyrimidinase ISO SMPDB SMP:00007 NCBI chr 4:32,791,152...32,879,489
Ensembl chr 4:32,789,460...32,879,489 		JBrowse link
G GAD1 glutamate decarboxylase 1 ISO SMPDB SMP:00007 NCBI chr15:76,991,863...77,034,819
Ensembl chr15:76,991,928...77,034,812 		JBrowse link
G LOC110256000 membrane primary amine oxidase-like ISO SMPDB SMP:00007 NCBI chr12:19,996,324...20,007,006 JBrowse link
G UPB1 beta-ureidopropionase 1 ISO SMPDB SMP:00007 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,231...49,565,075 		JBrowse link
bile acid biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOX2 acyl-CoA oxidase 2 ISO SMPDB SMP:00035 NCBI chr13:40,220,952...40,255,967
Ensembl chr13:40,223,010...40,255,967 		JBrowse link
G AKR1D1 aldo-keto reductase family 1 member D1 ISO SMPDB SMP:00035 NCBI chr18:11,416,065...11,532,846
Ensembl chr18:11,416,068...11,531,726 		JBrowse link
G AMACR alpha-methylacyl-CoA racemase ISO SMPDB SMP:00035 NCBI chr16:20,005,741...20,023,339
Ensembl chr16:19,956,366...20,023,289 		JBrowse link
G BAAT bile acid-CoA:amino acid N-acyltransferase ISO SMPDB SMP:00035 NCBI chr 1:243,065,668...243,084,816
Ensembl chr 1:243,065,795...243,084,287 		JBrowse link
G CH25H cholesterol 25-hydroxylase ISO SMPDB SMP:00035 NCBI chr14:101,122,318...101,128,622
Ensembl chr14:101,123,398...101,125,593 		JBrowse link
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 ISO SMPDB SMP:00035 NCBI chr15:120,809,886...120,852,196
Ensembl chr15:120,809,959...120,852,192 		JBrowse link
G CYP39A1 cytochrome P450 family 39 subfamily A member 1 ISO SMPDB SMP:00035 NCBI chr 7:41,345,011...41,425,854
Ensembl chr 7:41,344,804...41,425,997 		JBrowse link
G CYP46A1 cytochrome P450 family 46 subfamily A member 1 ISO SMPDB SMP:00035 NCBI chr 7:120,658,781...120,695,031
Ensembl chr 7:120,661,111...120,695,016 		JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 ISO SMPDB SMP:00035 NCBI chr 4:74,343,101...74,372,628
Ensembl chr 4:74,343,123...74,372,621 		JBrowse link
G CYP7B1 cytochrome P450 family 7 subfamily B member 1 ISO SMPDB SMP:00035 NCBI chr 4:69,615,953...69,793,131
Ensembl chr 4:69,616,049...69,806,496 		JBrowse link
G CYP8B1 cytochrome P450 family 8 subfamily B member 1 ISO SMPDB SMP:00035 NCBI chr13:26,330,233...26,331,738
Ensembl chr13:26,330,233...26,331,738 		JBrowse link
G HSD17B4 hydroxysteroid 17-beta dehydrogenase 4 ISO SMPDB SMP:00035 NCBI chr 2:123,313,445...123,401,386
Ensembl chr 2:123,313,448...123,402,709 		JBrowse link
G HSD3B7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ISO SMPDB SMP:00035 NCBI chr 3:17,459,627...17,463,381
Ensembl chr 3:17,459,630...17,463,386 		JBrowse link
G LIPA lipase A, lysosomal acid type ISO SMPDB SMP:00035 NCBI chr14:101,131,372...101,254,739
Ensembl chr14:101,126,257...101,193,614 		JBrowse link
G SCP2 sterol carrier protein 2 ISO SMPDB SMP:00035 NCBI chr 6:159,191,045...159,314,985 JBrowse link
G SLC27A5 solute carrier family 27 member 5 ISO SMPDB SMP:00035 NCBI chr 6:63,068,880...63,075,246
Ensembl chr 6:63,065,830...63,075,202 		JBrowse link
biotin metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTD biotinidase ISO SMPDB SMP:00066 NCBI chr13:2,840,425...2,902,619
Ensembl chr13:2,840,456...2,959,846 		JBrowse link
G HLCS holocarboxylase synthetase ISO SMPDB SMP:00066 NCBI chr13:200,406,395...200,618,967
Ensembl chr13:200,405,064...200,607,748 		JBrowse link
G SPCS1 signal peptidase complex subunit 1 ISO SMPDB SMP:00066 NCBI chr13:34,839,921...34,841,605
Ensembl chr13:34,839,384...34,841,600 		JBrowse link
butanoate metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADS acyl-CoA dehydrogenase short chain ISO SMPDB SMP:00073 NCBI chr14:40,642,810...40,656,922
Ensembl chr14:40,642,881...40,659,081 		JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 ISO SMPDB SMP:00073 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633 		JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 ISO SMPDB SMP:00073 NCBI chr14:141,340,320...141,348,870
Ensembl chr14:141,339,364...141,348,994 		JBrowse link
G HADH hydroxyacyl-CoA dehydrogenase ISO SMPDB SMP:00073 NCBI chr 8:113,952,561...114,005,510
Ensembl chr 8:113,950,034...114,005,511 		JBrowse link
G HMGCL 3-hydroxy-3-methylglutaryl-CoA lyase ISO SMPDB SMP:00073 NCBI chr 6:81,611,516...81,630,454
Ensembl chr 6:81,611,422...81,630,429 		JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO SMPDB SMP:00073 NCBI chr 4:101,420,941...101,440,302
Ensembl chr 4:101,420,872...101,438,126 		JBrowse link
G OXCT1 3-oxoacid CoA-transferase 1 ISO SMPDB SMP:00073 NCBI chr16:26,514,497...26,659,739
Ensembl chr16:26,512,401...26,659,808 		JBrowse link
C21-steroid hormone biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP11B2 cytochrome P450 family 11 subfamily B member 2 ISO RGD PMID:7829497 RGD:1299585 NCBI chr 4:1,365,725...1,373,138 JBrowse link
cardiolipin biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRLS1 cardiolipin synthase 1 ISO RGD PMID:24769127 RGD:10400850 NCBI chr17:14,860,319...14,892,436
Ensembl chr17:14,860,320...14,892,434 		JBrowse link
G PGS1 phosphatidylglycerophosphate synthase 1 ISO RGD PMID:24769127 RGD:10400850 NCBI chr12:3,589,539...3,628,964
Ensembl chr12:3,589,541...3,628,961 		JBrowse link
G PTPMT1 protein tyrosine phosphatase mitochondrial 1 ISO RGD PMID:24769127 RGD:10400850 NCBI chr 2:15,044,432...15,052,815
Ensembl chr 2:15,043,613...15,052,831 		JBrowse link
G TAMM41 TAM41 mitochondrial translocator assembly and maintenance homolog ISO RGD PMID:24769127 RGD:10400850 NCBI chr13:67,922,476...67,983,526
Ensembl chr13:67,922,480...67,983,526 		JBrowse link
cardiolipin metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CKMT1A creatine kinase, mitochondrial 1A ISO RGD PMID:24769127 RGD:10400850 NCBI chr 1:127,852,533...127,859,066 JBrowse link
G CYCS cytochrome c, somatic ISO RGD PMID:24769127 RGD:10400850 NCBI chr18:47,169,921...47,172,212
Ensembl chr18:47,169,866...47,173,866 		JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 ISO RGD PMID:24769127 RGD:10400850 NCBI chr 3:41,306,167...41,321,002
Ensembl chr 3:41,306,175...41,310,312 		JBrowse link
G TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase ISO RGD PMID:24769127 RGD:10400850 NCBI chr  X:124,940,036...124,946,275
Ensembl chr  X:124,940,031...124,946,273 		JBrowse link
carnitine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH9A1 aldehyde dehydrogenase 9 family member A1 ISO SMPDB SMP:00465 NCBI chr 4:85,029,914...85,057,650 JBrowse link
G BBOX1 gamma-butyrobetaine hydroxylase 1 ISO SMPDB SMP:00465 NCBI chr 2:33,227,965...33,296,013
Ensembl chr 2:33,227,974...33,296,559 		JBrowse link
G SETD7 SET domain containing 7, histone lysine methyltransferase ISO SMPDB SMP:00465 NCBI chr 8:87,478,266...87,527,190
Ensembl chr 8:87,478,173...87,527,188 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 ISO SMPDB SMP:00465 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450 		JBrowse link
G TMLHE trimethyllysine hydroxylase, epsilon ISO SMPDB SMP:00465 NCBI chr  X:125,601,920...125,673,716
Ensembl chr  X:125,598,116...125,673,669 		JBrowse link
catecholamine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBH dopamine beta-hydroxylase ISO SMPDB SMP:00012 NCBI chr 1:273,204,407...273,225,562
Ensembl chr 1:273,204,175...273,225,552 		JBrowse link
G DDC dopa decarboxylase ISO SMPDB SMP:00012 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,496,365...136,571,212 		JBrowse link
G PNMT phenylethanolamine N-methyltransferase ISO SMPDB SMP:00012 NCBI chr12:22,648,396...22,651,520
Ensembl chr12:22,648,398...22,649,999 		JBrowse link
G TH tyrosine hydroxylase ISO SMPDB SMP:00012 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
cholesterol biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT2 acetyl-CoA acetyltransferase 2 ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr 1:7,600,616...7,612,861
Ensembl chr 1:7,598,735...7,612,866 		JBrowse link
G CYP51A1 cytochrome P450 family 51 subfamily A member 1 ISO RGD
SMPDB		 PMID:7581240 PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 RGD:2316902 SMP:00023 NCBI chr 9:72,057,506...72,079,587
Ensembl chr 9:72,057,511...72,079,444 		JBrowse link
G DHCR24 24-dehydrocholesterol reductase ISO SMPDB
RGD		 PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 SMP:00023 NCBI chr 6:157,483,794...157,519,060
Ensembl chr 6:157,483,783...157,519,061 		JBrowse link
G DHCR7 7-dehydrocholesterol reductase ISO RGD PMID:9831636 PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 RGD:2316918 NCBI chr 2:2,377,352...2,391,846
Ensembl chr 2:2,377,416...2,391,447 		JBrowse link
G EBP EBP cholestenol delta-isomerase ISO SMPDB
RGD		 PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 SMP:00023 NCBI chr  X:42,670,592...42,678,571
Ensembl chr  X:42,670,633...42,678,570 		JBrowse link
G FDFT1 farnesyl-diphosphate farnesyltransferase 1 ISO RGD
SMPDB		 PMID:16440058 PMID:16876788 RGD:1626611 RGD:2316857 SMP:00023 NCBI chr14:14,976,259...15,010,701
Ensembl chr14:14,967,074...15,016,227 		JBrowse link
G FDPS farnesyl diphosphate synthase ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr 4:94,500,140...94,514,820
Ensembl chr 4:94,500,141...94,518,408 		JBrowse link
G GGPS1 geranylgeranyl diphosphate synthase 1 ISO SMPDB SMP:00023 NCBI chr14:55,907,885...55,924,037
Ensembl chr14:55,908,674...55,923,988 		JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr 2:84,380,245...84,401,117
Ensembl chr 2:84,380,224...84,402,957 		JBrowse link
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr16:27,936,225...27,957,261
Ensembl chr16:27,936,218...27,957,193 		JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 ISO SMPDB SMP:00023 NCBI chr 4:87,720,747...87,743,037
Ensembl chr 4:87,720,118...87,742,992 		JBrowse link
G LBR lamin B receptor ISO RGD PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 NCBI chr10:13,389,896...13,416,831
Ensembl chr10:13,386,946...13,416,759 		JBrowse link
G LIPA lipase A, lysosomal acid type ISO SMPDB SMP:00023 NCBI chr14:101,131,372...101,254,739
Ensembl chr14:101,126,257...101,193,614 		JBrowse link
G LOC100625049 isopentenyl-diphosphate Delta-isomerase 1 ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr10:68,534,520...68,539,279
Ensembl chr10:68,534,796...68,539,280 		JBrowse link
G LSS lanosterol synthase ISO RGD
SMPDB		 PMID:1429550 PMID:16440058 PMID:16876788 RGD:1626611 RGD:2316857 RGD:2316919 SMP:00023
G MSMO1 methylsterol monooxygenase 1 ISO SMPDB SMP:00023 NCBI chr 8:43,726,834...43,745,784
Ensembl chr 8:43,726,858...43,744,713 		JBrowse link
G MVD mevalonate diphosphate decarboxylase ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr 6:1,008,100...1,014,303
Ensembl chr 6:1,008,100...1,014,303 		JBrowse link
G MVK mevalonate kinase ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr14:41,320,790...41,357,437
Ensembl chr14:41,281,673...41,357,368 		JBrowse link
G NSDHL NAD(P) dependent steroid dehydrogenase-like ISO SMPDB
RGD		 PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 SMP:00023 NCBI chr  X:123,906,130...123,921,935
Ensembl chr  X:123,906,199...123,929,117 		JBrowse link
G PMVK phosphomevalonate kinase ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr 4:94,861,500...94,913,743
Ensembl chr 4:94,861,712...94,874,771 		JBrowse link
G SC5D sterol-C5-desaturase ISO RGD
SMPDB		 PMID:7961720 PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 RGD:2316911 SMP:00023 NCBI chr 9:48,357,115...48,372,391
Ensembl chr 9:48,357,165...48,372,386 		JBrowse link
G SOAT1 sterol O-acyltransferase 1 ISO SMPDB SMP:00023 NCBI chr 9:121,045,211...121,112,393
Ensembl chr 9:121,045,234...121,113,692 		JBrowse link
G SQLE squalene epoxidase ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr 4:14,669,789...14,700,152
Ensembl chr 4:14,669,791...14,700,126 		JBrowse link
G TM7SF2 transmembrane 7 superfamily member 2 ISO SMPDB SMP:00023 NCBI chr 2:7,076,778...7,081,502
Ensembl chr 2:7,075,068...7,081,432 		JBrowse link
choline metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase ISO SMPDB SMP:00123 NCBI chr17:37,726,084...37,744,378
Ensembl chr17:37,726,084...37,744,461 		JBrowse link
G ALDH7A1 aldehyde dehydrogenase 7 family member A1 ISO SMPDB SMP:00123 NCBI chr 2:129,663,226...129,709,728
Ensembl chr 2:129,662,969...129,709,705 		JBrowse link
G BHMT betaine--homocysteine S-methyltransferase ISO SMPDB SMP:00123 NCBI chr 2:87,911,093...87,935,252
Ensembl chr 2:87,910,603...87,935,252 		JBrowse link
G CHDH choline dehydrogenase ISO SMPDB SMP:00123 NCBI chr13:35,910,688...35,950,438
Ensembl chr13:35,910,698...35,948,683 		JBrowse link
G MAT2A methionine adenosyltransferase 2A ISO SMPDB SMP:00123 NCBI chr 3:59,220,203...59,225,097
Ensembl chr 3:59,218,688...59,225,249 		JBrowse link
G MAT2B methionine adenosyltransferase 2B ISO SMPDB SMP:00123 NCBI chr16:60,255,541...60,274,228
Ensembl chr16:60,255,358...60,274,135 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO SMPDB SMP:00123 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763 		JBrowse link
G PEMT phosphatidylethanolamine N-methyltransferase ISO SMPDB SMP:00123 NCBI chr12:60,880,367...60,919,279 JBrowse link
G SARDH sarcosine dehydrogenase ISO RGD PMID:9839943 RGD:634034 NCBI chr 1:273,230,357...273,295,170
Ensembl chr 1:273,230,375...273,294,621 		JBrowse link
citric acid cycle pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACO2 aconitase 2 ISO RGD
SMPDB		 PMID:9712727 RGD:2306877 SMP:00057 NCBI chr 5:7,014,383...7,071,023
Ensembl chr 5:7,008,719...7,071,025 		JBrowse link
G CS citrate synthase ISO SMPDB
RGD		 PMID:938457 PMID:9712727 RGD:2306828 RGD:2306877 SMP:00057 NCBI chr 5:21,669,778...21,700,737
Ensembl chr 5:21,666,585...21,700,711 		JBrowse link
G DLAT dihydrolipoamide S-acetyltransferase ISO SMPDB SMP:00057 NCBI chr 9:39,738,639...39,763,813
Ensembl chr 9:39,738,564...39,796,806 		JBrowse link
G DLD dihydrolipoamide dehydrogenase ISO SMPDB
RGD		 PMID:10672230 RGD:2306878 SMP:00057 NCBI chr 9:107,642,129...107,668,443
Ensembl chr 9:107,642,095...107,673,583 		JBrowse link
G DLST dihydrolipoamide S-succinyltransferase ISO SMPDB
RGD		 PMID:10672230 RGD:2306878 SMP:00057 NCBI chr 7:98,091,161...98,111,267
Ensembl chr 7:98,091,124...98,111,572 		JBrowse link
G FH fumarate hydratase ISO RGD
SMPDB		 PMID:938457 RGD:2306828 SMP:00057 NCBI chr10:12,404,143...12,431,843
Ensembl chr10:12,404,176...12,431,824 		JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ISO SMPDB
RGD		 PMID:938457 RGD:2306828 SMP:00057 NCBI chr 7:47,759,436...47,778,948
Ensembl chr 7:47,759,439...47,778,956 		JBrowse link
G IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta ISO SMPDB
RGD		 PMID:938457 RGD:2306828 SMP:00057 NCBI chr17:32,955,061...32,960,110
Ensembl chr17:32,955,101...32,960,104 		JBrowse link
G IDH3G isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ISO SMPDB
RGD		 PMID:938457 RGD:2306828 SMP:00057 NCBI chr  X:124,528,643...124,537,570
Ensembl chr  X:124,528,585...124,537,575 		JBrowse link
G MDH2 malate dehydrogenase 2 ISO RGD
SMPDB		 PMID:938457 RGD:2306828 SMP:00057 NCBI chr 3:10,120,121...10,132,705
Ensembl chr 3:10,120,083...10,132,752 		JBrowse link
G MPC1 mitochondrial pyruvate carrier 1 ISO SMPDB SMP:00057 NCBI chr 1:2,541,475...2,552,864 JBrowse link
G OGDH oxoglutarate dehydrogenase ISO RGD
SMPDB		 PMID:9712727 PMID:10672230 RGD:2306877 RGD:2306878 SMP:00057 NCBI chr18:50,609,415...50,684,990
Ensembl chr18:50,609,418...50,684,964 		JBrowse link
G PC pyruvate carboxylase ISO SMPDB SMP:00057 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,517...5,587,797 		JBrowse link
G PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 ISO SMPDB SMP:00057 NCBI chr  X:15,699,924...15,718,908
Ensembl chr  X:15,700,050...15,718,903 		JBrowse link
G PDHB pyruvate dehydrogenase E1 subunit beta ISO SMPDB SMP:00057 NCBI chr13:40,161,519...40,167,502
Ensembl chr13:40,160,568...40,167,476 		JBrowse link
G SDHA succinate dehydrogenase complex flavoprotein subunit A ISO SMPDB
RGD		 PMID:16143825 RGD:2306881 SMP:00057 NCBI chr16:79,838,442...79,862,956
Ensembl chr16:79,834,044...79,862,524 		JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B ISO SMPDB
RGD		 PMID:16143825 RGD:2306881 SMP:00057 NCBI chr 6:75,648,362...75,678,111
Ensembl chr 6:75,648,215...75,678,378 		JBrowse link
G SDHC succinate dehydrogenase complex subunit C ISO SMPDB
RGD		 PMID:16143825 RGD:2306881 SMP:00057 NCBI chr 4:89,135,410...89,169,164
Ensembl chr 4:89,130,379...89,169,118 		JBrowse link
G SDHD succinate dehydrogenase complex subunit D ISO SMPDB
RGD		 PMID:16143825 RGD:2306881 SMP:00057 NCBI chr 9:39,790,654...39,803,602
Ensembl chr 9:39,790,595...39,803,950 		JBrowse link
G SUCLA2 succinate-CoA ligase ADP-forming subunit beta ISO RGD PMID:17403370 RGD:2306915 NCBI chr11:19,616,415...19,670,667
Ensembl chr11:19,616,495...19,670,662 		JBrowse link
G SUCLG1 succinate-CoA ligase GDP/ADP-forming subunit alpha ISO RGD
SMPDB		 PMID:17403370 RGD:2306915 SMP:00057 NCBI chr 3:60,142,340...60,177,497
Ensembl chr 3:60,142,435...60,177,378 		JBrowse link
G SUCLG2 succinate-CoA ligase GDP-forming subunit beta ISO RGD
SMPDB		 PMID:17403370 RGD:2306915 SMP:00057 NCBI chr13:48,650,851...49,090,521
Ensembl chr13:48,823,733...49,090,468 		JBrowse link
cortisol biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:17926129 RGD:4892309 NCBI chr 7:59,172,829...59,188,479
Ensembl chr 7:59,175,758...59,188,478 		JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO RGD PMID:17926129 RGD:4892309 NCBI chr14:113,805,616...113,820,445
Ensembl chr14:113,805,611...113,812,041 		JBrowse link
G CYP21A1 cytochrome P450 family 21 subfamily A member 1 ISO RGD PMID:15583024 RGD:4889549 NCBI chr 7:24,086,138...24,089,364
Ensembl chr 7:24,086,218...24,089,370 		JBrowse link
G FDX1 ferredoxin 1 ISO RGD PMID:18821018 RGD:2325883 NCBI chr 9:38,376,147...38,399,026
Ensembl chr 9:38,375,984...38,404,832 		JBrowse link
G FDXR ferredoxin reductase ISO RGD PMID:18821018 RGD:2325883 NCBI chr12:6,372,224...6,382,769
Ensembl chr12:6,372,009...6,382,769 		JBrowse link
G HSD3B1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 ISO RGD PMID:15583024 RGD:4889549 NCBI chr 4:101,565,229...101,574,110 JBrowse link
G POR cytochrome p450 oxidoreductase ISO RGD PMID:17926129 RGD:4892309 NCBI chr 3:10,212,734...10,272,184
Ensembl chr 3:10,212,735...10,281,823 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:18821018 RGD:2325883 NCBI chr15:48,377,597...48,385,398
Ensembl chr15:48,377,521...48,385,462 		JBrowse link
creatine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CKM creatine kinase, M-type ISO RGD PMID:12069495 RGD:1359082 NCBI chr 6:51,704,021...51,716,935
Ensembl chr 6:51,700,507...51,714,814 		JBrowse link
G GAMT guanidinoacetate N-methyltransferase ISO RGD PMID:12069495 RGD:1359082 NCBI chr 2:77,076,566...77,079,751
Ensembl chr 2:77,076,566...77,079,759 		JBrowse link
G GATM glycine amidinotransferase ISO RGD PMID:8021264 RGD:70746 NCBI chr 1:126,361,968...126,378,705
Ensembl chr 1:126,361,945...126,380,871 		JBrowse link
G SLC6A8 solute carrier family 6 member 8 ISO RGD PMID:12069495 RGD:1359082 NCBI chr  X:124,435,282...124,452,182
Ensembl chr  X:124,294,856...124,452,182 		JBrowse link
cyclooxygenase mediated pathway of arachidonic acid metabolism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA1 annexin A1 ISO RGD PMID:18761105 RGD:8552898 NCBI chr 1:226,414,200...226,431,963
Ensembl chr 1:226,414,306...226,432,279 		JBrowse link
G MKNK1 MAPK interacting serine/threonine kinase 1 ISO RGD PMID:18761105 RGD:8552898 NCBI chr 6:164,887,707...164,933,526
Ensembl chr 6:164,887,748...164,933,521 		JBrowse link
G PLA2G4A phospholipase A2 group IVA ISO RGD PMID:18761105 PMID:22679221 RGD:8552712 RGD:8552898 NCBI chr 9:127,853,581...128,164,825
Ensembl chr 9:127,859,051...128,162,638 		JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 ISO RGD PMID:22679221 PMID:23063076 RGD:8552701 RGD:8552712 NCBI chr 1:262,456,106...262,482,159
Ensembl chr 1:262,456,155...262,483,035 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:22679221 PMID:23063076 RGD:8552701 RGD:8552712 NCBI chr 9:127,850,164...127,858,866
Ensembl chr 9:127,850,015...127,858,884 		JBrowse link
G VIM vimentin ISO RGD PMID:18761105 RGD:8552898 NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170 		JBrowse link
cysteine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARS1 cysteinyl-tRNA synthetase 1 ISO SMPDB SMP:00013 NCBI chr 2:2,119,576...2,163,378
Ensembl chr 2:2,119,592...2,163,343 		JBrowse link
G CBS cystathionine beta-synthase ISO RGD PMID:9359866 RGD:1359024 NCBI chr13:206,205,942...206,231,363
Ensembl chr13:206,205,946...206,230,248 		JBrowse link
G CDO1 cysteine dioxygenase type 1 ISO SMPDB SMP:00013 NCBI chr 2:119,927,768...119,940,690
Ensembl chr 2:119,927,772...119,940,665 		JBrowse link
G CTH cystathionine gamma-lyase ISO RGD
SMPDB		 PMID:9359866 RGD:1359024 SMP:00013 NCBI chr 6:142,454,922...142,486,352
Ensembl chr 6:142,454,914...142,486,367 		JBrowse link
G CTNS cystinosin, lysosomal cystine transporter ISO SMPDB SMP:00013 NCBI chr12:49,730,741...49,754,362
Ensembl chr12:49,730,955...49,753,043 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit ISO SMPDB SMP:00013 NCBI chr 7:27,209,565...27,253,535
Ensembl chr 7:27,209,565...27,253,530 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit ISO SMPDB SMP:00013 NCBI chr 4:123,371,198...123,390,130
Ensembl chr 4:123,371,193...123,390,131 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO SMPDB SMP:00013 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874 		JBrowse link
G MPST mercaptopyruvate sulfurtransferase ISO SMPDB SMP:00013 NCBI chr 5:10,739,179...10,749,826
Ensembl chr 5:10,739,197...10,749,731 		JBrowse link
cytochrome P450 monooxygenase mediated pathway of arachidonic acid metabolism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP4A90 cytochrome P450 family 4 subfamily A member 90 ISO RGD PMID:12857783 RGD:1625451 NCBI chr 6:128,704,964...128,722,878 JBrowse link
cytosolic iron-sulfur cluster protein assembly pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIAO1 cytosolic iron-sulfur assembly component 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 3:46,960,880...46,967,003
Ensembl chr 3:46,960,881...46,966,635 		JBrowse link
G CIAO2A cytosolic iron-sulfur assembly component 2A ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 1:107,951,618...107,969,306
Ensembl chr 1:107,951,646...107,969,298 		JBrowse link
G CIAO2B cytosolic iron-sulfur assembly component 2B ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 6:27,610,469...27,612,617
Ensembl chr 6:27,610,470...27,612,592 		JBrowse link
G CIAO3 cytosolic iron-sulfur assembly component 3 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 3:41,042,672...41,050,013
Ensembl chr 3:41,042,702...41,050,012 		JBrowse link
G CIAPIN1 cytokine induced apoptosis inhibitor 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 6:19,356,065...19,373,085
Ensembl chr 6:19,356,069...19,373,060 		JBrowse link
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr14:108,853,038...108,886,587
Ensembl chr14:108,853,025...108,886,579 		JBrowse link
G NDOR1 NADPH dependent diflavin oxidoreductase 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192
G NUBP1 NUBP iron-sulfur cluster assembly factor 1, cytosolic ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 3:32,311,774...32,340,120
Ensembl chr 3:32,311,779...32,340,034 		JBrowse link
G NUBP2 NUBP iron-sulfur cluster assembly factor 2, cytosolic ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 3:40,178,417...40,184,646
Ensembl chr 3:40,178,417...40,186,551 		JBrowse link
de novo nicotinamide adenine dinucleotide biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NADSYN1 NAD synthetase 1 ISO RGD PMID:20007326 RGD:11099972 NCBI chr 2:2,334,793...2,372,356
Ensembl chr 2:2,334,799...2,372,361 		JBrowse link
G NMNAT1 nicotinamide nucleotide adenylyltransferase 1 ISO RGD PMID:20007326 RGD:11099972 NCBI chr 6:70,271,296...70,307,403
Ensembl chr 6:70,272,014...70,310,707 		JBrowse link
G NMNAT2 nicotinamide nucleotide adenylyltransferase 2 ISO RGD PMID:20007326 RGD:11099972 NCBI chr 9:124,495,464...124,697,911
Ensembl chr 9:124,498,109...124,696,194 		JBrowse link
G NMNAT3 nicotinamide nucleotide adenylyltransferase 3 ISO RGD PMID:20007326 RGD:11099972 NCBI chr13:80,431,405...80,556,808
Ensembl chr13:80,429,639...80,556,790 		JBrowse link
G QPRT quinolinate phosphoribosyltransferase ISO RGD PMID:20007326 RGD:11099972 NCBI chr 3:17,987,223...18,001,712
Ensembl chr 3:17,987,242...18,001,711 		JBrowse link
de novo purine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase ISO RGD PMID:20005278 RGD:5135488 NCBI chr 5:8,027,799...8,045,480
Ensembl chr 5:8,025,508...8,047,603 		JBrowse link
G ADSS1 adenylosuccinate synthase 1 ISO RGD PMID:10218106 RGD:5143930
G ADSS2 adenylosuccinate synthase 2 ISO RGD PMID:10218106 RGD:5143930 NCBI chr10:17,220,081...17,259,141
Ensembl chr10:17,220,207...17,259,182 		JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:16167529 RGD:5490520 NCBI chr 1:268,355,032...268,365,659
Ensembl chr 1:268,355,033...268,365,598 		JBrowse link
G AK2 adenylate kinase 2 ISO RGD PMID:16167529 RGD:5490520 NCBI chr 6:89,295,164...89,318,169 JBrowse link
G AK3 adenylate kinase 3 ISO RGD PMID:16167529 RGD:5490520 NCBI chr 1:217,236,561...217,263,144
Ensembl chr 1:217,236,482...217,261,367 		JBrowse link
G AK4 adenylate kinase 4 ISO RGD PMID:16167529 RGD:5490520 NCBI chr 6:147,177,029...147,257,799
Ensembl chr 6:147,177,029...147,257,814 		JBrowse link
G AK5 adenylate kinase 5 ISO RGD PMID:16167529 RGD:5490520 NCBI chr 6:135,745,879...136,020,585
Ensembl chr 6:135,745,881...136,020,541 		JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:9332377 PMID:20005278 RGD:5135488 RGD:70804 NCBI chr15:117,617,584...117,649,063
Ensembl chr15:117,617,502...117,649,107 		JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:12450384 RGD:1547842 NCBI chr13:197,130,898...197,158,797
Ensembl chr13:197,130,904...197,161,891 		JBrowse link
G GMPS guanine monophosphate synthase ISO RGD PMID:20005278 RGD:5135488 NCBI chr13:95,742,342...95,820,903
Ensembl chr13:95,738,659...95,819,759 		JBrowse link
G IMPDH1 inosine monophosphate dehydrogenase 1 ISO RGD PMID:18295529 RGD:5144133 NCBI chr18:19,979,983...19,996,432
Ensembl chr18:19,979,983...19,996,429 		JBrowse link
G PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase ISO RGD PMID:7742366 RGD:633692 NCBI chr 8:55,700,700...55,722,982
Ensembl chr 8:55,700,956...55,722,979 		JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:20005278 RGD:5135488 NCBI chr 8:55,652,194...55,701,077
Ensembl chr 8:55,654,377...55,701,077 		JBrowse link
G PRPS1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:20005278 RGD:5135488 NCBI chr  X:88,074,861...88,101,925
Ensembl chr  X:88,074,965...88,101,910 		JBrowse link
G PRPS1L1 phosphoribosyl pyrophosphate synthetase 1 like 1 ISO RGD PMID:20005278 RGD:5135488 NCBI chr 9:87,161,863...87,164,314
Ensembl chr 9:87,163,252...87,164,208 		JBrowse link
G PRPS2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:20005278 RGD:5135488 NCBI chr  X:9,505,034...9,531,044
Ensembl chr  X:9,503,953...9,530,086
Ensembl chr  X:9,503,953...9,530,086 		JBrowse link
G QRICH1 glutamine rich 1 ISO RGD PMID:18295529 RGD:5144133 NCBI chr13:31,658,642...31,663,660
Ensembl chr13:31,658,650...31,663,552 		JBrowse link
G TAF9 TATA-box binding protein associated factor 9 ISO RGD PMID:16167529 RGD:5490520 NCBI chr16:47,494,841...47,499,568
Ensembl chr16:47,490,027...47,495,880 		JBrowse link
de novo pyrimidine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:15096496 RGD:5133412 NCBI chr 3:111,887,017...111,914,511
Ensembl chr 3:111,887,020...111,914,492 		JBrowse link
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:12678497 RGD:5133414 NCBI chr 6:164,161,439...164,197,429
Ensembl chr 6:164,162,518...164,197,379 		JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 ISO RGD PMID:192455 RGD:5133256 NCBI chr 3:128,903,395...128,917,873
Ensembl chr 3:128,903,616...128,917,871 		JBrowse link
G CTPS1 CTP synthase 1 ISO RGD PMID:12678497 RGD:5133414 NCBI chr 6:170,201,749...170,233,105
Ensembl chr 6:170,201,751...170,233,016 		JBrowse link
G CTPS2 CTP synthase 2 ISO RGD PMID:20739275 RGD:5133419 NCBI chr  X:13,050,740...13,181,131
Ensembl chr  X:13,049,941...13,174,568 		JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) ISO RGD PMID:15096496 RGD:5133412 NCBI chr 6:14,942,898...14,956,000
Ensembl chr 6:14,942,933...14,955,997 		JBrowse link
G NME1 NME/NM23 nucleoside diphosphate kinase 1 ISO RGD PMID:11768308 RGD:5134680 NCBI chr12:27,416,308...27,435,044
Ensembl chr12:27,416,346...27,436,140 		JBrowse link
G NME2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD PMID:11768308 RGD:5134680 NCBI chr12:27,439,529...27,445,025
Ensembl chr12:27,439,260...27,445,027 		JBrowse link
G NME3 NME/NM23 nucleoside diphosphate kinase 3 ISO RGD PMID:11768308 RGD:5134680 NCBI chr 3:40,195,456...40,197,121
Ensembl chr 3:40,195,635...40,196,869 		JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 ISO RGD PMID:11768308 RGD:5134680 NCBI chr 3:41,306,167...41,321,002
Ensembl chr 3:41,306,175...41,310,312 		JBrowse link
G NME6 NME/NM23 nucleoside diphosphate kinase 6 ISO RGD PMID:11768308 RGD:5134680 NCBI chr13:31,048,367...31,053,285
Ensembl chr13:31,046,948...31,053,130 		JBrowse link
G UMPS uridine monophosphate synthetase ISO RGD PMID:15096496 RGD:5133412 NCBI chr13:135,611,857...135,650,656
Ensembl chr13:135,610,058...135,650,603 		JBrowse link
dopamine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDC dopa decarboxylase ISO RGD PMID:19342614 RGD:4139904 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,496,365...136,571,212 		JBrowse link
G QDPR quinoid dihydropteridine reductase ISO RGD PMID:19342614 RGD:4139904 NCBI chr 8:12,529,500...12,549,471
Ensembl chr 8:12,529,512...12,549,603 		JBrowse link
G SLC18A2 solute carrier family 18 member A2 ISO RGD PMID:19903816 RGD:5128868 NCBI chr14:127,357,605...127,394,242
Ensembl chr14:127,357,555...127,396,533 		JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:19342614 RGD:4139904 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
electron transport chain pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5F1A ATP synthase F1 subunit alpha ISO SMPDB SMP:00355 NCBI chr 1:95,738,789...95,750,835
Ensembl chr 1:95,733,090...95,750,841 		JBrowse link
G ATP5F1B ATP synthase F1 subunit beta ISO SMPDB SMP:00355 NCBI chr 5:21,984,750...21,992,393
Ensembl chr 5:21,984,580...21,992,407 		JBrowse link
G ATP5F1C ATP synthase F1 subunit gamma ISO SMPDB SMP:00355 NCBI chr10:63,584,288...63,599,537
Ensembl chr10:63,583,695...63,599,453 		JBrowse link
G ATP5F1D ATP synthase F1 subunit delta ISO SMPDB SMP:00355 NCBI chr 2:77,216,430...77,219,301
Ensembl chr 2:77,216,436...77,222,632 		JBrowse link
G ATP5F1E ATP synthase F1 subunit epsilon ISO SMPDB SMP:00355 NCBI chr17:59,163,085...59,174,488 JBrowse link
G ATP5MC2 ATP synthase membrane subunit c locus 2 ISO SMPDB SMP:00355 NCBI chr 5:18,871,025...18,879,933
Ensembl chr 5:18,871,026...18,879,609 		JBrowse link
G ATP5PB ATP synthase peripheral stalk-membrane subunit b ISO SMPDB SMP:00355 NCBI chr 4:108,896,063...108,907,626
Ensembl chr 4:108,896,057...108,907,805 		JBrowse link
G CYCS cytochrome c, somatic ISO SMPDB SMP:00355 NCBI chr18:47,169,921...47,172,212
Ensembl chr18:47,169,866...47,173,866 		JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase ISO SMPDB SMP:00355 NCBI chr 5:64,129,678...64,135,194
Ensembl chr 5:64,129,679...64,133,991 		JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 ISO SMPDB SMP:00355 NCBI chr 5:16,008,179...16,021,676
Ensembl chr 5:16,007,448...16,017,825 		JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 ISO SMPDB SMP:00355 NCBI chr15:63,592,723...63,728,636
Ensembl chr15:63,619,762...63,728,633 		JBrowse link
G MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 ISO SMPDB SMP:00355 NCBI chr MT:9,120...9,800
Ensembl chr MT:9,120...9,800 		JBrowse link
G MT-CO1 mitochondrially encoded cytochrome c oxidase I ISO SMPDB SMP:00355 NCBI chr MT:6,511...8,055
Ensembl chr MT:6,511...8,055 		JBrowse link
G NDUFA1 NADH:ubiquinone oxidoreductase subunit A1 ISO SMPDB SMP:00355 NCBI chr  X:98,219,717...98,223,873
Ensembl chr  X:98,219,988...98,223,868 		JBrowse link
G SDHA succinate dehydrogenase complex flavoprotein subunit A ISO SMPDB
RGD		 PMID:16143825 RGD:2306881 SMP:00355 NCBI chr16:79,838,442...79,862,956
Ensembl chr16:79,834,044...79,862,524 		JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B ISO SMPDB
RGD		 PMID:16143825 RGD:2306881 SMP:00355 NCBI chr 6:75,648,362...75,678,111
Ensembl chr 6:75,648,215...75,678,378 		JBrowse link
G SDHC succinate dehydrogenase complex subunit C ISO SMPDB
RGD		 PMID:16143825 RGD:2306881 SMP:00355 NCBI chr 4:89,135,410...89,169,164
Ensembl chr 4:89,130,379...89,169,118 		JBrowse link
G SDHD succinate dehydrogenase complex subunit D ISO SMPDB
RGD		 PMID:15572694 PMID:16143825 RGD:1580035 RGD:2306881 SMP:00355 NCBI chr 9:39,790,654...39,803,602
Ensembl chr 9:39,790,595...39,803,950 		JBrowse link
G SLC25A4 solute carrier family 25 member 4 ISO SMPDB SMP:00355 NCBI chr15:46,193,498...46,197,989
Ensembl chr15:46,193,746...46,200,987 		JBrowse link
G SLC37A4 solute carrier family 37 member 4 ISO SMPDB SMP:00355 NCBI chr 9:46,247,278...46,254,068
Ensembl chr 9:46,247,284...46,254,031 		JBrowse link
G UQCRC1 ubiquinol-cytochrome c reductase core protein 1 ISO SMPDB SMP:00355 NCBI chr13:31,298,449...31,308,719
Ensembl chr13:31,298,449...31,309,516 		JBrowse link
epinephrine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBH dopamine beta-hydroxylase ISO RGD PMID:19342614 RGD:4139904 NCBI chr 1:273,204,407...273,225,562
Ensembl chr 1:273,204,175...273,225,552 		JBrowse link
G DDC dopa decarboxylase ISO RGD PMID:19342614 RGD:4139904 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,496,365...136,571,212 		JBrowse link
G PNMT phenylethanolamine N-methyltransferase ISO RGD PMID:7914070 PMID:19342614 RGD:4139902 RGD:4139904 NCBI chr12:22,648,396...22,651,520
Ensembl chr12:22,648,398...22,649,999 		JBrowse link
G QDPR quinoid dihydropteridine reductase ISO RGD PMID:19342614 RGD:4139904 NCBI chr 8:12,529,500...12,549,471
Ensembl chr 8:12,529,512...12,549,603 		JBrowse link
G SLC18A2 solute carrier family 18 member A2 ISO RGD PMID:19903816 RGD:5128868 NCBI chr14:127,357,605...127,394,242
Ensembl chr14:127,357,555...127,396,533 		JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:19342614 RGD:4139904 NCBI chr 2:1,499,628...1,506,180
Ensembl chr 2:1,499,620...1,506,170 		JBrowse link
estradiol biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:17926129 RGD:4892309 NCBI chr 7:59,172,829...59,188,479
Ensembl chr 7:59,175,758...59,188,478 		JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO RGD PMID:17926129 RGD:4892309 NCBI chr14:113,805,616...113,820,445
Ensembl chr14:113,805,611...113,812,041 		JBrowse link
G CYP19A3 cytochrome P450 19A3 ISO RGD PMID:18821018 RGD:2325883 NCBI chr 1:120,476,890...120,556,103
Ensembl chr 1:120,367,667...120,695,899 		JBrowse link
G FDX1 ferredoxin 1 ISO RGD PMID:18821018 RGD:2325883 NCBI chr 9:38,376,147...38,399,026
Ensembl chr 9:38,375,984...38,404,832 		JBrowse link
G FDXR ferredoxin reductase ISO RGD PMID:18821018 RGD:2325883 NCBI chr12:6,372,224...6,382,769
Ensembl chr12:6,372,009...6,382,769 		JBrowse link
G HSD17B1 hydroxysteroid 17-beta dehydrogenase 1 ISO RGD PMID:15583024 PMID:18821018 RGD:2325883 RGD:4889549 NCBI chr12:20,269,468...20,271,349
Ensembl chr12:20,269,056...20,271,548 		JBrowse link
G HSD17B2 hydroxysteroid 17-beta dehydrogenase 2 ISO RGD PMID:15583024 RGD:4889549 NCBI chr 6:6,296,429...6,360,434
Ensembl chr 6:6,292,707...6,360,633 		JBrowse link
G HSD17B3 hydroxysteroid 17-beta dehydrogenase 3 ISO RGD PMID:18821018 RGD:2325883 NCBI chr10:25,822,913...25,866,871
Ensembl chr10:25,822,913...25,866,871 		JBrowse link
G HSD3B1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 ISO RGD PMID:15583024 RGD:4889549 NCBI chr 4:101,565,229...101,574,110 JBrowse link
G POR cytochrome p450 oxidoreductase ISO RGD PMID:17926129 RGD:4892309 NCBI chr 3:10,212,734...10,272,184
Ensembl chr 3:10,212,735...10,281,823 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:18821018 RGD:2325883 NCBI chr15:48,377,597...48,385,398
Ensembl chr15:48,377,521...48,385,462 		JBrowse link
G STS steroid sulfatase ISO RGD PMID:21693170 RGD:6893583 NCBI chr  X:3,926,027...4,076,900
NCBI chr  Y:2,747,102...2,828,322 		JBrowse link
G SULT1E1 sulfotransferase family 1E, estrogen-preferring, member 1 ISO RGD PMID:21693170 RGD:6893583 NCBI chr 8:66,811,536...66,838,181
Ensembl chr 8:66,811,550...66,834,473 		JBrowse link
G SULT2A1 sulfotransferase family 2A member 1 ISO RGD PMID:18821018 RGD:2325883 NCBI chr 6:53,525,496...53,536,723
Ensembl chr 6:53,524,787...53,536,718 		JBrowse link
fatty acid beta degradation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 ISO SMPDB SMP:00052 NCBI chr  X:124,485,076...124,501,742
Ensembl chr  X:124,485,076...124,501,741 		JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 ISO SMPDB SMP:00052 NCBI chr 5:71,123,187...71,180,758
Ensembl chr 5:71,122,325...71,180,723 		JBrowse link
G ACAA2 acetyl-CoA acyltransferase 2 ISO RGD
SMPDB		 PMID:11879205 RGD:2317624 SMP:00480 SMP:00481 SMP:00482 NCBI chr 1:99,284,467...99,310,759
Ensembl chr 1:99,284,140...99,311,321 		JBrowse link
G ACAD9 acyl-CoA dehydrogenase family member 9 ISO RGD PMID:14728676 RGD:2317589 NCBI chr13:71,374,926...71,422,431
Ensembl chr13:71,374,944...71,427,126 		JBrowse link
G ACADL acyl-CoA dehydrogenase long chain ISO RGD
SMPDB		 PMID:3968063 PMID:14728676 RGD:2317589 RGD:2317678 SMP:00480 SMP:00482 NCBI chr15:112,935,631...112,969,381
Ensembl chr15:112,933,506...112,969,577 		JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain ISO RGD
SMPDB		 PMID:3968063 PMID:14728676 RGD:2317589 RGD:2317678 SMP:00481 NCBI chr 6:137,541,481...137,575,544
Ensembl chr 6:137,541,381...137,595,108 		JBrowse link
G ACADS acyl-CoA dehydrogenase short chain ISO SMPDB
RGD		 PMID:3968063 PMID:14728676 RGD:2317589 RGD:2317678 SMP:00480 NCBI chr14:40,642,810...40,656,922
Ensembl chr14:40,642,881...40,659,081 		JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain ISO RGD PMID:14728676 PMID:15850553 RGD:2317589 RGD:2317683 NCBI chr12:52,573,521...52,581,755
Ensembl chr12:52,576,402...52,581,748 		JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 ISO SMPDB SMP:00480 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633 		JBrowse link
G ACSL1 acyl-CoA synthetase long chain family member 1 ISO SMPDB
RGD		 PMID:17762044 RGD:2317576 SMP:00052 SMP:00482 NCBI chr15:45,866,858...45,936,327
Ensembl chr15:45,866,857...45,963,729 		JBrowse link
G ACSL3 acyl-CoA synthetase long chain family member 3 ISO RGD PMID:17762044 RGD:2317576 NCBI chr15:124,741,986...124,816,955
Ensembl chr15:124,765,854...124,816,960 		JBrowse link
G ACSL4 acyl-CoA synthetase long chain family member 4 ISO RGD PMID:17762044 RGD:2317576 NCBI chr  X:89,760,863...89,838,103
Ensembl chr  X:89,760,866...89,806,274 		JBrowse link
G ACSL5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:17762044 RGD:2317576 NCBI chr14:122,777,135...122,828,054
Ensembl chr14:122,777,130...122,828,052 		JBrowse link
G ACSL6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:17762044 RGD:2317576 NCBI chr 2:134,210,915...134,278,860
Ensembl chr 2:134,210,917...134,278,820 		JBrowse link
G ACSM2B acyl-CoA synthetase medium chain family member 2B ISO RGD PMID:17762044 RGD:2317576 NCBI chr 3:25,357,943...25,387,843 JBrowse link
G ACSM3 acyl-CoA synthetase medium chain family member 3 ISO RGD PMID:17762044 RGD:2317576 NCBI chr 3:25,247,723...25,284,063
Ensembl chr 3:25,247,725...25,283,709 		JBrowse link
G ACSM4 acyl-CoA synthetase medium-chain family member 4 ISO RGD PMID:17762044 RGD:2317576 NCBI chr 3:25,296,202...25,327,054
Ensembl chr 3:25,296,206...25,327,054 		JBrowse link
G ACSS1 acyl-CoA synthetase short chain family member 1 ISO RGD PMID:17762044 RGD:2317576 NCBI chr17:30,800,536...30,839,799
Ensembl chr17:30,800,427...30,839,742 		JBrowse link
G ACSS2 acyl-CoA synthetase short chain family member 2 ISO RGD PMID:17762044 RGD:2317576 NCBI chr17:38,260,152...38,315,764
Ensembl chr17:38,260,147...38,315,757 		JBrowse link
G ACSS3 acyl-CoA synthetase short chain family member 3 ISO SMPDB SMP:00480 NCBI chr 5:100,272,255...100,429,229
Ensembl chr 5:100,279,698...100,429,165 		JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO SMPDB
RGD		 PMID:19430727 RGD:2317584 SMP:00482 NCBI chr 2:4,250,642...4,293,914
Ensembl chr 2:4,233,099...4,293,911 		JBrowse link
G CPT1B carnitine palmitoyltransferase 1B ISO RGD PMID:19430727 RGD:2317584 NCBI chr 5:155,552...163,536
Ensembl chr 5:155,643...163,531 		JBrowse link
G CPT2 carnitine palmitoyltransferase 2 ISO SMPDB
RGD		 PMID:19430727 RGD:2317584 SMP:00052 SMP:00482 NCBI chr 6:159,038,129...159,061,327
Ensembl chr 6:159,036,422...159,061,327 		JBrowse link
G CRAT carnitine O-acetyltransferase ISO SMPDB SMP:00052 NCBI chr 1:269,387,430...269,401,334
Ensembl chr 1:269,386,650...269,401,331 		JBrowse link
G CROT carnitine O-octanoyltransferase ISO SMPDB SMP:00052 NCBI chr 9:93,263,606...93,308,150
Ensembl chr 9:93,258,619...93,308,151 		JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 ISO RGD
SMPDB		 PMID:12379132 RGD:2317616 SMP:00480 SMP:00481 SMP:00482 NCBI chr14:141,340,320...141,348,870
Ensembl chr14:141,339,364...141,348,994 		JBrowse link
G ETFA electron transfer flavoprotein subunit alpha ISO RGD PMID:14728676 RGD:2317589 NCBI chr 7:56,450,508...56,540,275
Ensembl chr 7:56,450,520...56,540,253 		JBrowse link
G ETFB electron transfer flavoprotein subunit beta ISO RGD PMID:14728676 RGD:2317589 NCBI chr 6:58,501,892...58,517,580
Ensembl chr 6:58,501,811...58,517,579 		JBrowse link
G ETFDH electron transfer flavoprotein dehydrogenase ISO RGD PMID:14728676 RGD:2317589 NCBI chr 8:47,608,499...47,655,889
Ensembl chr 8:47,608,772...47,657,436 		JBrowse link
G HADH hydroxyacyl-CoA dehydrogenase ISO SMPDB
RGD		 PMID:17491019 RGD:2302227 SMP:00480 SMP:00481 SMP:00482 NCBI chr 8:113,952,561...114,005,510
Ensembl chr 8:113,950,034...114,005,511 		JBrowse link
G HADHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha ISO SMPDB
RGD		 PMID:10816122 RGD:2317625 SMP:00481 SMP:00482 NCBI chr 3:112,753,343...112,797,627
Ensembl chr 3:112,752,865...112,797,733 		JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta ISO SMPDB
RGD		 PMID:10816122 RGD:2317625 SMP:00481 SMP:00482 NCBI chr 3:112,712,894...112,753,121
Ensembl chr 3:112,704,024...112,753,086 		JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 ISO SMPDB SMP:00480 NCBI chr  X:46,218,540...46,220,942
Ensembl chr  X:46,218,548...46,220,883 		JBrowse link
G PEX11G peroxisomal biogenesis factor 11 gamma ISO SMPDB SMP:00052 NCBI chr 2:71,639,289...71,649,445
Ensembl chr 2:71,639,301...71,652,903 		JBrowse link
G PEX13 peroxisomal biogenesis factor 13 ISO SMPDB SMP:00052 NCBI chr 3:80,757,470...80,791,107
Ensembl chr 3:80,753,908...80,791,056 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 ISO SMPDB SMP:00052 NCBI chr 6:70,737,871...70,872,074
Ensembl chr 6:70,737,905...70,872,072 		JBrowse link
G SLC25A20 solute carrier family 25 member 20 ISO SMPDB
RGD		 PMID:19430727 RGD:2317584 SMP:00052 SMP:00481 SMP:00482 NCBI chr13:31,523,820...31,553,289
Ensembl chr13:31,523,821...31,553,286 		JBrowse link
fatty acid biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACACA acetyl-CoA carboxylase alpha ISO SMPDB
RGD		 PMID:11735100 PMID:17882277 RGD:2317309 RGD:2317316 SMP:00456 NCBI chr12:38,580,916...38,875,067
Ensembl chr12:38,581,457...38,824,712 		JBrowse link
G ACLY ATP citrate lyase ISO RGD PMID:11735100 PMID:17882277 RGD:2317309 RGD:2317316 NCBI chr12:20,796,678...20,841,301
Ensembl chr12:20,796,749...20,841,298 		JBrowse link
G FASN fatty acid synthase ISO SMPDB
RGD		 PMID:15715522 PMID:17882277 PMID:19181734 RGD:2317204 RGD:2317309 RGD:2317317 SMP:00456 NCBI chr12:922,405...937,560
Ensembl chr12:920,509...937,561 		JBrowse link
fatty acid elongation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAA2 acetyl-CoA acyltransferase 2 ISO SMPDB SMP:00054 NCBI chr 1:99,284,467...99,310,759
Ensembl chr 1:99,284,140...99,311,321 		JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 ISO SMPDB SMP:00054 NCBI chr14:141,340,320...141,348,870
Ensembl chr14:141,339,364...141,348,994 		JBrowse link
G HADHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha ISO SMPDB SMP:00054 NCBI chr 3:112,753,343...112,797,627
Ensembl chr 3:112,752,865...112,797,733 		JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta ISO SMPDB SMP:00054 NCBI chr 3:112,712,894...112,753,121
Ensembl chr 3:112,704,024...112,753,086 		JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 ISO SMPDB SMP:00054 NCBI chr  X:46,218,540...46,220,942
Ensembl chr  X:46,218,548...46,220,883 		JBrowse link
G MECR mitochondrial trans-2-enoyl-CoA reductase ISO SMPDB SMP:00054 NCBI chr 6:86,094,383...86,131,691
Ensembl chr 6:86,094,423...86,131,682 		JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 ISO SMPDB SMP:00054 NCBI chr 6:95,840,906...95,860,858
Ensembl chr 6:95,840,908...95,860,858 		JBrowse link
fatty acid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAA2 acetyl-CoA acyltransferase 2 ISO SMPDB SMP:00051 NCBI chr 1:99,284,467...99,310,759
Ensembl chr 1:99,284,140...99,311,321 		JBrowse link
G ACADL acyl-CoA dehydrogenase long chain ISO SMPDB SMP:00051 NCBI chr15:112,935,631...112,969,381
Ensembl chr15:112,933,506...112,969,577 		JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain ISO SMPDB SMP:00051 NCBI chr 6:137,541,481...137,575,544
Ensembl chr 6:137,541,381...137,595,108 		JBrowse link
G ACADS acyl-CoA dehydrogenase short chain ISO SMPDB SMP:00051 NCBI chr14:40,642,810...40,656,922
Ensembl chr14:40,642,881...40,659,081 		JBrowse link
G ACADSB acyl-CoA dehydrogenase short/branched chain ISO SMPDB SMP:00051 NCBI chr14:132,563,002...132,607,574
Ensembl chr14:132,563,309...132,626,841 		JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain ISO SMPDB SMP:00051 NCBI chr12:52,573,521...52,581,755
Ensembl chr12:52,576,402...52,581,748 		JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 ISO SMPDB SMP:00051 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633 		JBrowse link
G ACSL1 acyl-CoA synthetase long chain family member 1 ISO SMPDB SMP:00051 NCBI chr15:45,866,858...45,936,327
Ensembl chr15:45,866,857...45,963,729 		JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO SMPDB SMP:00051 NCBI chr 2:4,250,642...4,293,914
Ensembl chr 2:4,233,099...4,293,911 		JBrowse link
G CPT2 carnitine palmitoyltransferase 2 ISO SMPDB SMP:00051 NCBI chr 6:159,038,129...159,061,327
Ensembl chr 6:159,036,422...159,061,327 		JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 ISO SMPDB SMP:00051 NCBI chr14:141,340,320...141,348,870
Ensembl chr14:141,339,364...141,348,994 		JBrowse link
G GCDH glutaryl-CoA dehydrogenase ISO SMPDB SMP:00051 NCBI chr 2:66,131,154...66,138,963
Ensembl chr 2:66,130,625...66,138,868 		JBrowse link
G HADHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha ISO RGD
SMPDB		 PMID:1730633 RGD:1600572 SMP:00051 NCBI chr 3:112,753,343...112,797,627
Ensembl chr 3:112,752,865...112,797,733 		JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta ISO RGD
SMPDB		 PMID:1730633 RGD:1600572 SMP:00051 NCBI chr 3:112,712,894...112,753,121
Ensembl chr 3:112,704,024...112,753,086 		JBrowse link
G SCD stearoyl-CoA desaturase ISO RGD PMID:12896875 RGD:1304415 NCBI chr14:111,461,560...111,478,033
Ensembl chr14:111,461,569...111,478,020 		JBrowse link
folate cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 7:53,748,585...53,794,777
Ensembl chr 7:53,748,653...53,794,706 		JBrowse link
G AMT aminomethyltransferase ISO RGD PMID:20645850 RGD:7242560 NCBI chr13:31,995,600...32,002,514
Ensembl chr13:31,995,595...32,002,470 		JBrowse link
G DHFR dihydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 2:89,230,660...89,255,830 JBrowse link
G DLD dihydrolipoamide dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 9:107,642,129...107,668,443
Ensembl chr 9:107,642,095...107,673,583 		JBrowse link
G DMGDH dimethylglycine dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 2:87,791,827...87,867,189
Ensembl chr 2:87,791,943...87,866,679 		JBrowse link
G FOLH1B folate hydrolase 1B ISO RGD PMID:16859665 PMID:20814827 RGD:7242426 RGD:7242559 NCBI chr 9:22,903,997...22,960,648
Ensembl chr 9:22,903,979...22,963,472 		JBrowse link
G FOLR1 folate receptor alpha ISO RGD PMID:22108709 RGD:7242557 NCBI chr 9:6,753,513...6,760,433
Ensembl chr 9:6,757,040...6,760,402 		JBrowse link
G FOLR2 folate receptor 2 (fetal) ISO RGD PMID:22108709 RGD:7242557 NCBI chr 9:6,785,308...6,790,466
Ensembl chr 9:6,785,303...6,790,465 		JBrowse link
G FPGS folylpolyglutamate synthase ISO RGD PMID:16859665 RGD:7242559 NCBI chr 1:268,281,298...268,309,397
Ensembl chr 1:268,287,765...268,309,398 		JBrowse link
G GCSH glycine cleavage system protein H ISO RGD PMID:20645850 RGD:7242560 NCBI chr 6:7,171,186...7,184,732
Ensembl chr 6:7,171,192...7,184,729 		JBrowse link
G GGH gamma-glutamyl hydrolase ISO RGD PMID:16859665 RGD:7242559 NCBI chr 4:70,996,730...71,020,513
Ensembl chr 4:70,996,755...71,021,838 		JBrowse link
G GLDC glycine decarboxylase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 1:215,608,854...215,715,062
Ensembl chr 1:215,608,849...215,715,059 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like ISO RGD PMID:22108709 RGD:7242557 NCBI chr 1:15,140,929...15,330,265
Ensembl chr 1:15,140,899...15,329,986 		JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO RGD PMID:20645850 PMID:22108709 RGD:7242557 RGD:7242560 NCBI chr 3:68,819,171...68,833,641
Ensembl chr 3:68,818,119...68,833,600 		JBrowse link
G MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like ISO RGD PMID:22108709 RGD:7242557 NCBI chr 8:70,179,701...70,288,356
Ensembl chr 8:70,179,658...70,290,047 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22108709 RGD:7242557 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,228...74,270,783 		JBrowse link
G SARDH sarcosine dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 1:273,230,357...273,295,170
Ensembl chr 1:273,230,375...273,294,621 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:20645850 PMID:22108709 RGD:7242557 RGD:7242560 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319 		JBrowse link
G SLC19A1 solute carrier family 19 member 1 ISO RGD PMID:20814827 PMID:22108709 RGD:7242426 RGD:7242557 NCBI chr13:207,986,094...208,007,855
Ensembl chr13:207,986,098...208,007,675 		JBrowse link
G SLC25A32 solute carrier family 25 member 32 ISO RGD PMID:22332074 RGD:7242561 NCBI chr 4:33,704,810...33,727,796
Ensembl chr 4:33,704,771...33,730,130 		JBrowse link
G SLC46A1 solute carrier family 46 member 1 ISO RGD PMID:20814827 PMID:22108709 RGD:7242426 RGD:7242557 NCBI chr12:44,677,499...44,686,277
Ensembl chr12:44,677,502...44,686,250 		JBrowse link
folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:14729668 RGD:1547843 NCBI chr 7:53,748,585...53,794,777
Ensembl chr 7:53,748,653...53,794,706 		JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:9332377 PMID:22332074 RGD:70804 RGD:7242561 NCBI chr15:117,617,584...117,649,063
Ensembl chr15:117,617,502...117,649,107 		JBrowse link
G DHFR dihydrofolate reductase ISO RGD PMID:11502523 PMID:22332074 RGD:1298877 RGD:7242561 NCBI chr 2:89,230,660...89,255,830 JBrowse link
G DMGDH dimethylglycine dehydrogenase ISO RGD PMID:15358367 RGD:1547831 NCBI chr 2:87,791,827...87,867,189
Ensembl chr 2:87,791,943...87,866,679 		JBrowse link
G FOLH1B folate hydrolase 1B ISO RGD PMID:9501243 RGD:728645 NCBI chr 9:22,903,997...22,960,648
Ensembl chr 9:22,903,979...22,963,472 		JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:12450384 PMID:22332074 RGD:1547842 RGD:7242561 NCBI chr13:197,130,898...197,158,797
Ensembl chr13:197,130,904...197,161,891 		JBrowse link
G GNMT glycine N-methyltransferase ISO RGD PMID:8278367 RGD:1545057 NCBI chr 7:38,038,359...38,041,218
Ensembl chr 7:38,038,358...38,041,217 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:2186031 PMID:22332074 RGD:1299513 RGD:7242561 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387 		JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO RGD PMID:9454603 RGD:1540378 NCBI chr 3:68,819,171...68,833,641
Ensembl chr 3:68,818,119...68,833,600 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO RGD PMID:11933257 PMID:22332074 RGD:1535021 RGD:7242561 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:15845641 PMID:20814827 RGD:1359026 RGD:7242426 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,228...74,270,783 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 ISO RGD PMID:3110140 PMID:15671219 PMID:22332074 RGD:1359815 RGD:2300383 RGD:7242561 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:3110140 PMID:15671219 PMID:22332074 RGD:1359815 RGD:2300383 RGD:7242561 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319 		JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:9894005 PMID:22332074 RGD:1545055 RGD:7242561 NCBI chr 6:105,642,730...105,660,279
Ensembl chr 6:105,642,381...105,660,578 		JBrowse link
folate metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO SMPDB
RGD		 PMID:14729668 RGD:1547843 SMP:00053 NCBI chr 7:53,748,585...53,794,777
Ensembl chr 7:53,748,653...53,794,706 		JBrowse link
G DHFR dihydrofolate reductase ISO SMPDB
RGD		 PMID:11502523 RGD:1298877 SMP:00053 NCBI chr 2:89,230,660...89,255,830 JBrowse link
G DMGDH dimethylglycine dehydrogenase ISO RGD PMID:15358367 RGD:1547831 NCBI chr 2:87,791,827...87,867,189
Ensembl chr 2:87,791,943...87,866,679 		JBrowse link
G FOLH1B folate hydrolase 1B ISO RGD PMID:9816319 RGD:151347637 NCBI chr 9:22,903,997...22,960,648
Ensembl chr 9:22,903,979...22,963,472 		JBrowse link
G FOLR2 folate receptor 2 (fetal) ISO RGD PMID:8445646 RGD:1540379 NCBI chr 9:6,785,308...6,790,466
Ensembl chr 9:6,785,303...6,790,465 		JBrowse link
G FPGS folylpolyglutamate synthase ISO SMPDB SMP:00053 NCBI chr 1:268,281,298...268,309,397
Ensembl chr 1:268,287,765...268,309,398 		JBrowse link
G FTCD formimidoyltransferase cyclodeaminase ISO SMPDB SMP:00053
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:12450384 RGD:1547842 NCBI chr13:197,130,898...197,158,797
Ensembl chr13:197,130,904...197,161,891 		JBrowse link
G GGH gamma-glutamyl hydrolase ISO SMPDB SMP:00053 NCBI chr 4:70,996,730...71,020,513
Ensembl chr 4:70,996,755...71,021,838 		JBrowse link
G GNMT glycine N-methyltransferase ISO RGD PMID:15347642 RGD:1359070 NCBI chr 7:38,038,359...38,041,218
Ensembl chr 7:38,038,358...38,041,217 		JBrowse link
G LOC102167410 5-formyltetrahydrofolate cyclo-ligase ISO SMPDB SMP:00053 NCBI chr 7:48,717,518...48,873,492
Ensembl chr 7:48,717,851...48,873,455 		JBrowse link
G MTFMT mitochondrial methionyl-tRNA formyltransferase ISO SMPDB SMP:00053 NCBI chr 1:106,970,620...107,001,563
Ensembl chr 1:106,970,640...107,001,564 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO SMPDB
RGD		 PMID:2186031 RGD:1299513 SMP:00053 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,387 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like ISO SMPDB SMP:00053 NCBI chr 1:15,140,929...15,330,265
Ensembl chr 1:15,140,899...15,329,986 		JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO SMPDB
RGD		 PMID:9454603 RGD:1540378 SMP:00053 NCBI chr 3:68,819,171...68,833,641
Ensembl chr 3:68,818,119...68,833,600 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO SMPDB
RGD		 PMID:11933257 RGD:1535021 SMP:00053 NCBI chr 6:71,863,637...71,882,118
Ensembl chr 6:71,863,637...71,881,820 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:15845641 RGD:1359026 NCBI chr14:54,546,978...54,652,780
Ensembl chr14:54,546,978...54,652,763 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:15979034 RGD:1359037 NCBI chr16:74,245,214...74,270,828
Ensembl chr16:74,245,228...74,270,783 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 ISO RGD PMID:15671219 RGD:1359815 NCBI chr12:60,414,421...60,435,451
Ensembl chr12:60,416,463...60,435,450 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:15671219 RGD:1359815 NCBI chr 5:22,535,780...22,540,322
Ensembl chr 5:22,532,894...22,540,319 		JBrowse link
G SLC19A1 solute carrier family 19 member 1 ISO RGD PMID:11600421 RGD:735239 NCBI chr13:207,986,094...208,007,855
Ensembl chr13:207,986,098...208,007,675 		JBrowse link
G SLC46A1 solute carrier family 46 member 1 ISO SMPDB SMP:00053 NCBI chr12:44,677,499...44,686,277
Ensembl chr12:44,677,502...44,686,250 		JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:9894005 RGD:1545055 NCBI chr 6:105,642,730...105,660,279
Ensembl chr 6:105,642,381...105,660,578 		JBrowse link
fructose and mannose metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1B1 aldo-keto reductase family 1 member B ISO SMPDB SMP:00064 NCBI chr18:14,593,516...14,752,316
Ensembl chr18:14,684,036...14,752,310 		JBrowse link
G ALDOB aldolase, fructose-bisphosphate B ISO SMPDB SMP:00064 NCBI chr 1:243,127,870...243,141,504
Ensembl chr 1:243,110,585...243,141,418 		JBrowse link
G FBP1 fructose-bisphosphatase 1 ISO SMPDB SMP:00064 NCBI chr10:27,588,609...27,622,225
Ensembl chr10:27,588,570...27,622,674 		JBrowse link
G FCSK fucose kinase ISO SMPDB SMP:00064 NCBI chr 6:13,471,771...13,492,581
Ensembl chr 6:13,471,833...13,506,419 		JBrowse link
G FPGT fucose-1-phosphate guanylyltransferase ISO SMPDB SMP:00064 NCBI chr 6:138,941,832...138,950,340
Ensembl chr 6:138,940,486...138,950,356 		JBrowse link
G GFUS GDP-L-fucose synthase ISO SMPDB SMP:00064 NCBI chr 4:950,947...955,865
Ensembl chr 4:949,867...959,744 		JBrowse link
G GMDS GDP-mannose 4,6-dehydratase ISO SMPDB SMP:00064 NCBI chr 7:849,088...1,285,563
Ensembl chr 7:752,592...1,285,550 		JBrowse link
G GMPPB GDP-mannose pyrophosphorylase B ISO SMPDB SMP:00064 NCBI chr13:32,246,471...32,253,162
Ensembl chr13:32,248,268...32,253,155
Ensembl chr13:32,248,268...32,253,155 		JBrowse link
G HK1 hexokinase 1 ISO SMPDB SMP:00064 NCBI chr14:72,383,328...72,460,927
Ensembl chr14:72,351,246...72,460,924 		JBrowse link
G KHK ketohexokinase ISO SMPDB SMP:00064 NCBI chr 3:112,021,163...112,031,615
Ensembl chr 3:112,021,108...112,031,620 		JBrowse link
G MPI mannose phosphate isomerase ISO SMPDB SMP:00064 NCBI chr 7:58,657,960...58,666,803
Ensembl chr 7:58,657,662...58,666,929 		JBrowse link
G PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 ISO SMPDB SMP:00064 NCBI chr  X:47,771,751...47,859,079
Ensembl chr  X:47,765,154...47,859,061 		JBrowse link
G PFKL phosphofructokinase, liver type ISO SMPDB SMP:00064 NCBI chr13:207,167,287...207,191,688
Ensembl chr13:207,167,281...207,191,671 		JBrowse link
G PHPT1 phosphohistidine phosphatase 1 ISO SMPDB SMP:00064
G PMM1 phosphomannomutase 1 ISO SMPDB SMP:00064 NCBI chr 5:6,964,999...6,975,904
Ensembl chr 5:6,964,999...6,975,904 		JBrowse link
G SORD sorbitol dehydrogenase ISO SMPDB SMP:00064 NCBI chr 1:126,659,198...126,701,084
Ensembl chr 1:126,655,156...126,701,138 		JBrowse link
G TPI1 triosephosphate isomerase 1 ISO SMPDB SMP:00064 NCBI chr 5:63,839,473...63,842,853
Ensembl chr 5:63,838,506...63,843,134 		JBrowse link
galactose metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1B1 aldo-keto reductase family 1 member B ISO SMPDB SMP:00043 NCBI chr18:14,593,516...14,752,316
Ensembl chr18:14,684,036...14,752,310 		JBrowse link
G B4GALT1 beta-1,4-galactosyltransferase 1 ISO SMPDB SMP:00043 NCBI chr10:33,317,295...33,381,285
Ensembl chr10:33,317,305...33,381,285 		JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 ISO SMPDB SMP:00043 NCBI chr12:19,965,885...19,975,783
Ensembl chr12:19,965,330...19,975,857 		JBrowse link
G GAA alpha glucosidase ISO SMPDB SMP:00043 NCBI chr12:2,315,807...2,339,867
Ensembl chr12:2,314,591...2,336,988 		JBrowse link
G GALE UDP-galactose-4-epimerase ISO SMPDB SMP:00043 NCBI chr 6:81,605,968...81,610,535
Ensembl chr 6:81,605,968...81,610,473 		JBrowse link
G GALK1 galactokinase 1 ISO SMPDB SMP:00043 NCBI chr12:5,642,012...5,651,186
Ensembl chr12:5,642,025...5,651,183 		JBrowse link
G GALT galactose-1-phosphate uridylyltransferase ISO SMPDB SMP:00043 NCBI chr10:32,151,150...32,154,792
Ensembl chr10:32,151,177...32,154,740 		JBrowse link
G GCK glucokinase ISO SMPDB SMP:00043 NCBI chr18:50,979,167...51,024,500
Ensembl chr18:50,979,167...51,029,844 		JBrowse link
G GLA galactosidase alpha ISO SMPDB SMP:00043 NCBI chr  X:83,024,582...83,032,273
Ensembl chr  X:83,023,903...83,032,570 		JBrowse link
G GLB1 galactosidase beta 1 ISO SMPDB SMP:00043 NCBI chr13:18,878,407...18,978,999
Ensembl chr13:18,878,612...18,953,146 		JBrowse link
G HK1 hexokinase 1 ISO SMPDB SMP:00043 NCBI chr14:72,383,328...72,460,927
Ensembl chr14:72,351,246...72,460,924 		JBrowse link
G LOC100625897 lactase-phlorizin hydrolase ISO SMPDB SMP:00043 NCBI chr15:16,094,277...16,154,467 JBrowse link
G PGM1 phosphoglucomutase 1 ISO SMPDB SMP:00043 NCBI chr 6:148,851,183...148,918,891
Ensembl chr 6:148,851,183...148,994,952 		JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 ISO SMPDB SMP:00043 NCBI chr 3:77,975,450...78,032,471
Ensembl chr 3:77,975,441...78,031,703 		JBrowse link
gluconeogenesis pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOB aldolase, fructose-bisphosphate B ISO RGD PMID:5251864 RGD:2302796 NCBI chr 1:243,127,870...243,141,504
Ensembl chr 1:243,110,585...243,141,418 		JBrowse link
G BPGM bisphosphoglycerate mutase ISO SMPDB SMP:00128 NCBI chr18:14,555,919...14,593,321
Ensembl chr18:14,556,832...14,593,252 		JBrowse link
G ENO1 enolase 1 ISO RGD
SMPDB		 PMID:2966075 RGD:2302802 SMP:00128 NCBI chr 6:69,385,879...69,401,664
Ensembl chr 6:69,385,879...69,401,151 		JBrowse link
G ENO2 enolase 2 ISO RGD PMID:15720133 RGD:2302795 NCBI chr 5:63,799,927...63,809,067
Ensembl chr 5:63,799,930...63,809,410 		JBrowse link
G FBP1 fructose-bisphosphatase 1 ISO RGD
SMPDB		 PMID:4353083 PMID:11440903 RGD:2302851 RGD:2302970 SMP:00128 NCBI chr10:27,588,609...27,622,225
Ensembl chr10:27,588,570...27,622,674 		JBrowse link
G FBP2 fructose-bisphosphatase 2 ISO RGD PMID:4353083 PMID:11440903 RGD:2302851 RGD:2302970 NCBI chr10:27,631,833...27,661,704
Ensembl chr10:27,631,496...27,665,246 		JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 ISO SMPDB
RGD		 PMID:4303362 PMID:4353083 PMID:11440903 RGD:2302850 RGD:2302851 RGD:2302970 SMP:00128 NCBI chr12:19,965,885...19,975,783
Ensembl chr12:19,965,330...19,975,857 		JBrowse link
G G6PC3 glucose-6-phosphatase catalytic subunit 3 ISO RGD PMID:4303362 PMID:4353083 PMID:11440903 RGD:2302850 RGD:2302851 RGD:2302970 NCBI chr12:19,121,540...19,126,291
Ensembl chr12:19,121,544...19,126,295 		JBrowse link
G GALM galactose mutarotase ISO SMPDB SMP:00128 NCBI chr 3:101,617,521...101,682,821
Ensembl chr 3:101,617,526...101,753,125 		JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase ISO RGD
SMPDB		 PMID:15720133 RGD:2302795 SMP:00128 NCBI chr 5:64,129,678...64,135,194
Ensembl chr 5:64,129,679...64,133,991 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:2966075 RGD:2302802 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 ISO RGD PMID:2966075 RGD:2302802 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067 		JBrowse link
G GPI glucose-6-phosphate isomerase ISO SMPDB SMP:00128 NCBI chr 6:44,038,374...44,069,331
Ensembl chr 6:44,038,357...44,069,328 		JBrowse link
G HK2 hexokinase 2 ISO SMPDB SMP:00128 NCBI chr 3:68,155,656...68,231,187
Ensembl chr 3:68,153,835...68,231,615 		JBrowse link
G MDH2 malate dehydrogenase 2 ISO SMPDB SMP:00128 NCBI chr 3:10,120,121...10,132,705
Ensembl chr 3:10,120,083...10,132,752 		JBrowse link
G MPC1 mitochondrial pyruvate carrier 1 ISO SMPDB SMP:00128 NCBI chr 1:2,541,475...2,552,864 JBrowse link
G PANK1 pantothenate kinase 1 ISO SMPDB SMP:00128 NCBI chr14:101,410,139...101,512,498
Ensembl chr14:101,409,253...101,473,945 		JBrowse link
G PC pyruvate carboxylase ISO SMPDB
RGD		 PMID:4353083 PMID:5773282 PMID:6049928 PMID:18613815 RGD:2302809 RGD:2302851 RGD:2302971 RGD:2302972 SMP:00128 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,517...5,587,797 		JBrowse link
G PCK1 phosphoenolpyruvate carboxykinase 1 ISO SMPDB
RGD		 PMID:2966075 PMID:4303362 PMID:4353083 PMID:6049928 PMID:11440903 More... RGD:2302802 RGD:2302809 RGD:2302850 RGD:2302851 RGD:2302970 RGD:2302971 SMP:00128 NCBI chr17:57,930,507...57,936,523
Ensembl chr17:57,930,432...57,936,522 		JBrowse link
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial ISO RGD PMID:2966075 PMID:4353083 PMID:6049928 PMID:11440903 PMID:18613815 RGD:2302802 RGD:2302809 RGD:2302851 RGD:2302970 RGD:2302971 NCBI chr 7:75,187,195...75,197,613
Ensembl chr 7:75,187,197...75,197,733 		JBrowse link
G PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 ISO RGD PMID:15170386 RGD:2302793 NCBI chr  X:47,771,751...47,859,079
Ensembl chr  X:47,765,154...47,859,061 		JBrowse link
G PGAM1 phosphoglycerate mutase 1 ISO SMPDB SMP:00128 NCBI chr14:108,822,782...108,832,818
Ensembl chr14:108,822,812...108,833,058 		JBrowse link
G PGAM2 phosphoglycerate mutase 2 ISO RGD
SMPDB		 PMID:15720133 PMID:18092946 RGD:2302794 RGD:2302795 SMP:00128 NCBI chr18:48,693,832...48,712,787
Ensembl chr18:48,710,347...48,713,862 		JBrowse link
G PGK1 phosphoglycerate kinase 1 ISO RGD PMID:3091090 PMID:15720133 RGD:2302795 RGD:2302860 NCBI chr  X:62,187,472...62,210,321
Ensembl chr  X:62,187,434...62,210,705 		JBrowse link
G PGM1 phosphoglucomutase 1 ISO SMPDB SMP:00128 NCBI chr 6:148,851,183...148,918,891
Ensembl chr 6:148,851,183...148,994,952 		JBrowse link
G SLC25A11 solute carrier family 25 member 11 ISO SMPDB SMP:00128 NCBI chr12:51,970,794...51,973,668
Ensembl chr12:51,970,806...51,975,548 		JBrowse link
G SLC2A2 solute carrier family 2 member 2 ISO SMPDB SMP:00128 NCBI chr13:109,592,595...109,614,105
Ensembl chr13:109,587,258...109,638,510 		JBrowse link
G SLC37A4 solute carrier family 37 member 4 ISO SMPDB SMP:00128 NCBI chr 9:46,247,278...46,254,068
Ensembl chr 9:46,247,284...46,254,031 		JBrowse link
G TPI1 triosephosphate isomerase 1 ISO SMPDB SMP:00128 NCBI chr 5:63,839,473...63,842,853
Ensembl chr 5:63,838,506...63,843,134 		JBrowse link
glutamic acid/glutamate metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO SMPDB SMP:00072 NCBI chr 3:33,913,068...33,960,804
Ensembl chr 3:33,908,970...34,015,474 		JBrowse link
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 ISO SMPDB SMP:00072 NCBI chr 6:77,373,999...77,404,015
Ensembl chr 6:77,374,002...77,404,036 		JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 ISO SMPDB SMP:00072 NCBI chr 7:19,351,485...19,375,515
Ensembl chr 7:19,351,361...19,379,098 		JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO SMPDB SMP:00072 NCBI chr 3:111,887,017...111,914,511
Ensembl chr 3:111,887,020...111,914,492 		JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 ISO SMPDB SMP:00072 NCBI chr15:113,210,038...113,339,086
Ensembl chr15:113,150,157...113,339,078 		JBrowse link
G EARS2 glutamyl-tRNA synthetase 2, mitochondrial ISO SMPDB SMP:00072 NCBI chr 3:22,654,351...22,684,246
Ensembl chr 3:22,657,766...22,684,241 		JBrowse link
G GAD1 glutamate decarboxylase 1 ISO SMPDB SMP:00072 NCBI chr15:76,991,863...77,034,819
Ensembl chr15:76,991,928...77,034,812 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit ISO SMPDB SMP:00072 NCBI chr 7:27,209,565...27,253,535
Ensembl chr 7:27,209,565...27,253,530 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit ISO SMPDB SMP:00072 NCBI chr 4:123,371,198...123,390,130
Ensembl chr 4:123,371,193...123,390,131 		JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO SMPDB SMP:00072 NCBI chr 3:73,028,750...73,086,191
Ensembl chr 3:73,028,804...73,085,319 		JBrowse link
G GLS2 glutaminase 2 ISO SMPDB SMP:00072 NCBI chr 5:21,806,405...21,820,001
Ensembl chr 5:21,806,406...21,820,001 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 ISO SMPDB SMP:00072 NCBI chr14:87,968,850...88,005,375
Ensembl chr14:87,968,850...88,005,520 		JBrowse link
G GLUL glutamate-ammonia ligase ISO SMPDB
RGD		 PMID:28323 PMID:4403443 RGD:2301547 RGD:2301548 SMP:00072 NCBI chr 9:123,751,551...123,762,575
Ensembl chr 9:123,751,548...123,762,547 		JBrowse link
G GMPS guanine monophosphate synthase ISO SMPDB SMP:00072 NCBI chr13:95,742,342...95,820,903
Ensembl chr13:95,738,659...95,819,759 		JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO SMPDB SMP:00072 NCBI chr 1:182,404,460...182,423,453
Ensembl chr 1:182,407,229...182,423,441 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 ISO SMPDB SMP:00072 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,200...20,432,067 		JBrowse link
G GSR glutathione-disulfide reductase ISO SMPDB SMP:00072 NCBI chr15:54,382,564...54,433,989
Ensembl chr15:54,382,567...54,433,984 		JBrowse link
G GSS glutathione synthetase ISO SMPDB SMP:00072 NCBI chr17:38,316,199...38,342,253
Ensembl chr17:38,312,720...38,342,298 		JBrowse link
G NADSYN1 NAD synthetase 1 ISO SMPDB SMP:00072 NCBI chr 2:2,334,793...2,372,356
Ensembl chr 2:2,334,799...2,372,361 		JBrowse link
G NAGK N-acetylglucosamine kinase ISO SMPDB SMP:00072 NCBI chr 3:71,496,191...71,513,020
Ensembl chr 3:71,500,337...71,512,955 		JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase ISO SMPDB SMP:00072 NCBI chr 8:55,652,194...55,701,077
Ensembl chr 8:55,654,377...55,701,077 		JBrowse link
G PPP1R16A protein phosphatase 1 regulatory subunit 16A ISO SMPDB SMP:00072 NCBI chr 4:302,621...320,048
Ensembl chr 4:297,748...320,056 		JBrowse link
G QARS1 glutaminyl-tRNA synthetase 1 ISO SMPDB SMP:00072 NCBI chr13:31,715,686...31,723,200
Ensembl chr13:31,715,689...31,723,197 		JBrowse link
glutathione conjugation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSTA1 glutathione S-transferase alpha 1 ISO RGD PMID:17197701 RGD:1641938 NCBI chr 7:46,538,743...46,550,781
Ensembl chr 7:46,538,032...46,548,670 		JBrowse link
G GSTA4 glutathione S-transferase alpha 4 ISO RGD PMID:10720752 PMID:11018474 RGD:1358120 RGD:1641942 NCBI chr 7:46,635,903...46,656,491
Ensembl chr 7:46,635,902...46,656,450 		JBrowse link
G GSTO2 glutathione S-transferase omega 2 ISO RGD PMID:10720752 RGD:1358120 NCBI chr14:115,218,179...115,242,377
Ensembl chr14:115,217,879...115,251,435 		JBrowse link
G LOC100739163 glutathione S-transferase P-like ISO RGD PMID:11018474 PMID:15110098 RGD:1357965 RGD:1641942 NCBI chr 2:4,978,761...4,982,233 JBrowse link
glutathione metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANPEP alanyl aminopeptidase, membrane ISO SMPDB SMP:00015 NCBI chr 7:55,351,081...55,373,856
Ensembl chr 7:55,351,087...55,373,881 		JBrowse link
G CASP7 caspase 7 ISO SMPDB SMP:00015 NCBI chr14:124,017,776...124,050,369
Ensembl chr14:124,019,164...124,050,365 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit ISO SMPDB
RGD		 PMID:16137247 PMID:16183645 RGD:1582661 RGD:1582663 SMP:00015 NCBI chr 7:27,209,565...27,253,535
Ensembl chr 7:27,209,565...27,253,530 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit ISO RGD
SMPDB		 PMID:16137247 PMID:16183645 RGD:1582661 RGD:1582663 SMP:00015 NCBI chr 4:123,371,198...123,390,130
Ensembl chr 4:123,371,193...123,390,131 		JBrowse link
G GGCT gamma-glutamylcyclotransferase ISO SMPDB SMP:00015 NCBI chr18:42,410,734...42,418,534
Ensembl chr18:42,410,792...42,418,980 		JBrowse link
G GGT6 gamma-glutamyltransferase 6 ISO SMPDB SMP:00015 NCBI chr12:50,507,501...50,514,578
Ensembl chr12:50,506,907...50,510,903 		JBrowse link
G GPX1 glutathione peroxidase 1 ISO SMPDB SMP:00015 NCBI chr13:31,916,269...31,917,337
Ensembl chr13:31,916,246...31,917,433 		JBrowse link
G GSR glutathione-disulfide reductase ISO SMPDB SMP:00015 NCBI chr15:54,382,564...54,433,989
Ensembl chr15:54,382,567...54,433,984 		JBrowse link
G GSS glutathione synthetase ISO SMPDB SMP:00015 NCBI chr17:38,316,199...38,342,253
Ensembl chr17:38,312,720...38,342,298 		JBrowse link
G GSTO2 glutathione S-transferase omega 2 ISO SMPDB SMP:00015 NCBI chr14:115,218,179...115,242,377
Ensembl chr14:115,217,879...115,251,435 		JBrowse link
G OPLAH 5-oxoprolinase, ATP-hydrolysing ISO SMPDB SMP:00015 NCBI chr 4:629,901...639,420
Ensembl chr 4:629,870...639,406 		JBrowse link
glycerolipid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1 ISO SMPDB SMP:00039 NCBI chr 7:24,205,930...24,208,430
Ensembl chr 7:24,204,905...24,213,193 		JBrowse link
G AKR1B1 aldo-keto reductase family 1 member B ISO SMPDB SMP:00039 NCBI chr18:14,593,516...14,752,316
Ensembl chr18:14,684,036...14,752,310 		JBrowse link
G ALDH3A1 aldehyde dehydrogenase 3 family member A1 ISO SMPDB SMP:00039 NCBI chr12:59,895,476...59,905,900
Ensembl chr12:59,897,496...59,905,897 		JBrowse link
G DGKA diacylglycerol kinase alpha ISO SMPDB SMP:00039 NCBI chr 5:21,331,473...21,355,614
Ensembl chr 5:21,331,473...21,355,534 		JBrowse link
G GK glycerol kinase ISO SMPDB SMP:00039 NCBI chr  X:26,470,422...26,558,892 JBrowse link
G GLYCTK glycerate kinase ISO SMPDB SMP:00039 NCBI chr13:34,433,403...34,440,037
Ensembl chr13:34,433,399...34,440,264 		JBrowse link
G GPAM glycerol-3-phosphate acyltransferase, mitochondrial ISO SMPDB SMP:00039 NCBI chr14:122,538,600...122,582,390
Ensembl chr14:122,538,603...122,579,148 		JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 ISO SMPDB SMP:00039 NCBI chr 5:16,008,179...16,021,676
Ensembl chr 5:16,007,448...16,017,825 		JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 ISO SMPDB SMP:00039 NCBI chr15:63,592,723...63,728,636
Ensembl chr15:63,619,762...63,728,633 		JBrowse link
G LIPC lipase C, hepatic type ISO SMPDB SMP:00039 NCBI chr 1:113,433,684...113,604,139
Ensembl chr 1:113,433,687...113,583,963 		JBrowse link
G LPL lipoprotein lipase ISO SMPDB SMP:00039 NCBI chr14:4,104,761...4,134,964
Ensembl chr14:4,104,772...4,135,814 		JBrowse link
G PLPP1 phospholipid phosphatase 1 ISO SMPDB SMP:00039 NCBI chr16:34,604,367...34,741,524
Ensembl chr16:34,600,719...34,744,437 		JBrowse link
G PLPP2 phospholipid phosphatase 2 ISO SMPDB SMP:00039 NCBI chr 2:77,945,760...77,957,318
Ensembl chr 2:77,945,841...77,957,313 		JBrowse link
glycerophospholipid metabolic pathway