Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:classic metabolic pathway
go back to main search page
Accession:PW:0000002 term browser browse the term
Definition:The various, enzyme-controlled, series of reactions allowing for the conversion of materials, energy availability and biodegradation of xenobiotics.
Comment:The definition was compiled based on a number of available defintions in various dictionaries.
Synonyms:related_synonym: Metabolism;   metabolic process


show annotations for term's descendants           Sort by:
acetylcholine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACHE acetylcholinesterase (Cartwright blood group) ISO rostral-caudal differences in Ache and Chat enzyme activities in the superior colliculus
activities of Ache and Chat varied considerably between different layers of the cerebellar vermis		 RGD PMID:126256 PMID:334962 PMID:4008917 PMID:6854006 RGD:2301195 RGD:2301197 RGD:2301199 RGD:2301203 NCBI chr 7:92,915,065...92,922,079
Ensembl chr 7:106,311,944...106,318,184 		JBrowse link
G CHAT choline O-acetyltransferase ISO activities of Ache and Chat varied considerably between different layers of the cerebellar vermis
rostral-caudal differences in Ache and Chat enzyme activities in the superior colliculus		 RGD PMID:126256 PMID:334962 PMID:4008917 PMID:6854006 RGD:2301195 RGD:2301197 RGD:2301199 RGD:2301203 NCBI chr10:44,574,925...44,629,618 JBrowse link
ADP-ribosylation pathway, cyclic ribosylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BST1 bone marrow stromal cell antigen 1 ISO RGD PMID:23576305 RGD:11250406 NCBI chr 4:10,154,453...10,183,448
Ensembl chr 4:15,451,958...15,480,195 		JBrowse link
G CD38 CD38 molecule ISO RGD PMID:23576305 RGD:11250406 NCBI chr 4:10,228,803...10,295,129
Ensembl chr 4:15,525,835...15,587,677 		JBrowse link
ADP-ribosylation pathway, mono and poly-ribosylation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APLF aprataxin and PNKP like factor ISO RGD PMID:26091342 RGD:11100038 NCBI chr2A:68,509,314...68,629,192
Ensembl chr2A:69,632,459...69,744,611 		JBrowse link
G CHFR checkpoint with forkhead and ring finger domains ISO RGD PMID:26091342 RGD:11100038 NCBI chr12:130,318,971...130,366,282
Ensembl chr12:134,923,458...134,968,832
Ensembl chr12:134,923,458...134,968,832 		JBrowse link
G MACROD1 mono-ADP ribosylhydrolase 1 ISO RGD PMID:26091342 RGD:11100038 NCBI chr11:59,355,525...59,525,620 JBrowse link
G MACROD2 mono-ADP ribosylhydrolase 2 ISO RGD PMID:26091342 RGD:11100038 NCBI chr20:13,966,338...16,020,506
Ensembl chr20:13,950,260...15,997,806 		JBrowse link
G OARD1 O-acyl-ADP-ribose deacylase 1 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 6:40,655,255...40,662,476
Ensembl chr 6:41,963,670...41,969,451 		JBrowse link
G PARG poly(ADP-ribose) glycohydrolase ISO RGD PMID:26091342 RGD:11100038 NCBI chr10:44,290,391...44,420,184 JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 1:201,820,355...201,867,673
Ensembl chr 1:206,812,981...206,860,356 		JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 8:140,743,061...140,744,014
Ensembl chr 8:143,735,819...143,744,138 		JBrowse link
G PARP11 poly(ADP-ribose) polymerase family member 11 ISO RGD PMID:26091342 RGD:11100038 NCBI chr12:3,928,474...3,992,713
Ensembl chr12:3,857,256...3,879,242 		JBrowse link
G PARP12 poly(ADP-ribose) polymerase family member 12 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 7:131,962,104...132,001,945
Ensembl chr 7:144,442,973...144,480,006 		JBrowse link
G PARP14 poly(ADP-ribose) polymerase family member 14 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 3:119,773,334...119,823,732
Ensembl chr 3:126,677,868...126,728,256 		JBrowse link
G PARP15 poly(ADP-ribose) polymerase family member 15 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 3:119,665,014...119,730,198
Ensembl chr 3:126,601,919...126,634,842 		JBrowse link
G PARP16 poly(ADP-ribose) polymerase family member 16 ISO RGD PMID:26091342 RGD:11100038 NCBI chr15:44,163,785...44,231,895
Ensembl chr15:62,485,144...62,513,722 		JBrowse link
G PARP2 poly(ADP-ribose) polymerase 2 ISO RGD PMID:26091342 RGD:11100038 NCBI chr14:1,215,727...1,230,006
Ensembl chr14:19,269,046...19,282,853 		JBrowse link
G PARP3 poly(ADP-ribose) polymerase family member 3 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 3:51,883,695...51,890,266
Ensembl chr 3:53,112,494...53,119,053 		JBrowse link
G PARP4 poly(ADP-ribose) polymerase family member 4 ISO RGD PMID:26091342 RGD:11100038 NCBI chr13:5,734,322...5,827,323
Ensembl chr13:24,029,405...24,113,075 		JBrowse link
G PARP6 poly(ADP-ribose) polymerase family member 6 ISO RGD PMID:26091342 RGD:11100038 NCBI chr15:51,191,718...51,223,312
Ensembl chr15:69,955,568...69,987,061 		JBrowse link
G PARP8 poly(ADP-ribose) polymerase family member 8 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 5:63,175,182...63,363,346
Ensembl chr 5:64,789,584...64,975,283 		JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 3:119,617,722...119,655,039
Ensembl chr 3:126,522,859...126,559,647 		JBrowse link
G RNF146 ring finger protein 146 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 6:125,057,312...125,079,096
Ensembl chr 6:129,190,562...129,191,733 		JBrowse link
G TIPARP TCDD inducible poly(ADP-ribose) polymerase ISO RGD PMID:26091342 RGD:11100038 NCBI chr 3:153,730,307...153,762,442
Ensembl chr 3:161,783,999...161,816,525 		JBrowse link
G TNKS tankyrase ISO RGD PMID:26091342 RGD:11100038 NCBI chr 8:9,435,412...9,654,810 JBrowse link
G TNKS2 tankyrase 2 ISO RGD PMID:26091342 RGD:11100038 NCBI chr10:88,547,396...88,612,973
Ensembl chr10:92,070,362...92,134,911 		JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 ISO RGD PMID:26091342 RGD:11100038 NCBI chr 7:131,002,580...131,068,513
Ensembl chr 7:143,489,750...143,555,438 		JBrowse link
alanine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 ISO SMPDB SMP:00055 NCBI chr16:54,727,601...54,763,458
Ensembl chr16:70,086,735...70,121,902 		JBrowse link
G AARS2 alanyl-tRNA synthetase 2, mitochondrial ISO SMPDB SMP:00055 NCBI chr 6:43,895,255...43,909,347
Ensembl chr 6:45,176,773...45,191,505 		JBrowse link
G AGXT alanine--glyoxylate aminotransferase ISO SMPDB SMP:00055 NCBI chr2B:128,125,289...128,137,091
Ensembl chr2B:246,928,784...246,939,837 		JBrowse link
G GPT glutamic--pyruvic transaminase ISO SMPDB SMP:00055 Ensembl chr 8:144,259,991...144,263,737 JBrowse link
G PC pyruvate carboxylase ISO SMPDB SMP:00055 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396 		JBrowse link
aldosterone biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:17926129 RGD:4892309 NCBI chr15:53,280,110...53,310,868
Ensembl chr15:72,901,286...72,931,164 		JBrowse link
G CYP11B1 cytochrome P450 family 11 subfamily B member 1 ISO RGD PMID:15583024 RGD:4889549 NCBI chr 8:139,584,976...139,592,466
Ensembl chr 8:142,629,127...142,634,654 		JBrowse link
G FDX1 ferredoxin 1 ISO RGD PMID:18821018 RGD:2325883 NCBI chr11:105,311,613...105,345,414 JBrowse link
G FDXR ferredoxin reductase ISO RGD PMID:18821018 RGD:2325883 NCBI chr17:68,808,123...68,818,642
Ensembl chr17:74,364,343...74,374,852 		JBrowse link
G LOC100990437 NADPH--cytochrome P450 reductase ISO RGD PMID:17926129 RGD:4892309 NCBI chr 7:68,035,021...68,105,934
Ensembl chr 7:82,364,418...82,437,530 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:18821018 RGD:2325883 NCBI chr 8:37,446,334...37,454,102
Ensembl chr 8:34,623,201...34,629,544 		JBrowse link
alpha-linolenic acid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELOVL4 ELOVL fatty acid elongase 4 ISO SMPDB SMP:00018 NCBI chr 6:77,798,058...77,830,840
Ensembl chr 6:81,068,882...81,102,050 		JBrowse link
G ELOVL5 ELOVL fatty acid elongase 5 ISO SMPDB SMP:00018 NCBI chr 6:52,822,038...52,902,122
Ensembl chr 6:54,451,887...54,485,878 		JBrowse link
G FADS1 fatty acid desaturase 1 ISO SMPDB SMP:00018 NCBI chr11:57,101,553...57,116,243
Ensembl chr11:60,462,420...60,476,798 		JBrowse link
G FADS2 fatty acid desaturase 2 ISO SMPDB SMP:00018 NCBI chr11:57,192,881...57,232,574
Ensembl chr11:60,476,082...60,591,649 		JBrowse link
altered citric acid cycle pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FH fumarate hydratase ISO RGD PMID:17211469 RGD:6907135 NCBI chr 1:217,059,847...217,081,795
Ensembl chr 1:222,041,142...222,064,212 		JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B ISO RGD PMID:21771581 RGD:6907134 NCBI chr 1:15,962,383...15,998,056
Ensembl chr 1:17,018,542...17,054,509 		JBrowse link
G SDHD succinate dehydrogenase complex subunit D ISO RGD PMID:21771581 RGD:6907134 NCBI chr11:106,973,256...106,982,237
Ensembl chr11:110,817,016...110,896,829 		JBrowse link
altered folate cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 3:123,166,630...123,244,257
Ensembl chr 3:130,484,862...130,562,934 		JBrowse link
G DHFR dihydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 5:34,663,210...34,689,467
Ensembl chr 5:34,938,548...34,967,003 		JBrowse link
G LOC100994139 folate receptor alpha ISO RGD PMID:22108709 RGD:7242557 NCBI chr11:67,268,721...67,275,498
Ensembl chr11:70,492,039...70,498,665 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 1:10,548,196...10,568,174
Ensembl chr 1:11,766,334...11,785,419 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 1:212,353,195...212,463,304
Ensembl chr 1:217,358,050...217,460,946 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 5:8,195,868...8,228,071
Ensembl chr 5:8,017,403...8,049,322 		JBrowse link
G SLC46A1 solute carrier family 46 member 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr17:28,367,674...28,379,618
Ensembl chr17:28,870,678...28,877,632 		JBrowse link
altered folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO RGD PMID:22353665 RGD:7242562 NCBI chr 1:10,548,196...10,568,174
Ensembl chr 1:11,766,334...11,785,419 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22353665 RGD:7242562 NCBI chr 1:212,353,195...212,463,304
Ensembl chr 1:217,358,050...217,460,946 		JBrowse link
altered galactose metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6PC1 glucose-6-phosphatase catalytic subunit 1 ISO RGD PMID:8865366 RGD:728661 NCBI chr17:14,407,355...14,419,660
Ensembl chr17:14,635,667...14,646,674 		JBrowse link
G HK2 hexokinase 2 ISO RGD PMID:7622509 RGD:632917 NCBI chr2A:74,897,914...74,957,234
Ensembl chr2A:76,400,240...76,460,874 		JBrowse link
altered lipoprotein metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 ISO RGD PMID:16011471 RGD:1578416 NCBI chr11:111,673,539...111,675,428
Ensembl chr11:115,606,136...115,608,122 		JBrowse link
G APOA4 apolipoprotein A4 ISO RGD PMID:16011471 RGD:1578416 NCBI chr11:111,659,186...111,661,790
Ensembl chr11:115,591,788...115,594,382 		JBrowse link
G APOB apolipoprotein B ISO RGD PMID:16011471 RGD:1578416 NCBI chr2A:20,986,464...21,029,004
Ensembl chr2A:21,100,356...21,145,129 		JBrowse link
G APOC2 apolipoprotein C2 ISO RGD PMID:10073946 RGD:1578471 NCBI chr19:41,892,954...41,896,461 JBrowse link
G APOC3 apolipoprotein C3 ISO RGD PMID:10073946 RGD:1578471 NCBI chr11:111,667,816...111,670,861
Ensembl chr11:115,600,416...115,603,460 		JBrowse link
G APOE apolipoprotein E ISO RGD PMID:16011471 RGD:1578416 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490 		JBrowse link
G LOC100994952 apolipoprotein C-I, acidic form ISO RGD PMID:10073946 RGD:1578471 NCBI chr19:41,862,168...41,878,231 JBrowse link
altered retinoid cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 1:96,659,703...96,784,876
Ensembl chr 1:95,386,266...95,514,589 		JBrowse link
G LRAT lecithin retinol acyltransferase ISO RGD PMID:20212494 RGD:8547536 NCBI chr 4:147,110,568...147,119,706
Ensembl chr 4:158,928,607...158,937,747 		JBrowse link
G RBP3 retinol binding protein 3 ISO RGD PMID:20212494 RGD:8547536 NCBI chr10:46,543,196...46,558,978 JBrowse link
G RDH12 retinol dehydrogenase 12 ISO RGD PMID:20212494 RGD:8547536 NCBI chr14:48,297,854...48,314,502
Ensembl chr14:67,180,696...67,192,345 		JBrowse link
G RLBP1 retinaldehyde binding protein 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chr15:67,901,276...67,913,911
Ensembl chr15:87,108,815...87,117,971 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 ISO RGD PMID:20212494 RGD:8547536 NCBI chr 1:67,666,784...67,687,891
Ensembl chr 1:69,623,775...69,644,904 		JBrowse link
altered reverse cholesterol transport pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 ISO RGD PMID:11086027 RGD:1600951 NCBI chr 9:75,948,831...76,096,136
Ensembl chr 9:104,076,516...104,224,188 		JBrowse link
amino sugar metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMDHD2 amidohydrolase domain containing 2 ISO SMPDB SMP:00045 NCBI chr16:1,376,904...1,387,883
Ensembl chr16:2,619,320...2,630,375 		JBrowse link
G CHIT1 chitinase 1 ISO SMPDB SMP:00045 NCBI chr 1:178,816,396...178,875,895 JBrowse link
G CMAS cytidine monophosphate N-acetylneuraminic acid synthetase ISO SMPDB SMP:00045 NCBI chr12:64,234,241...64,253,306
Ensembl chr12:66,838,670...66,857,774 		JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO SMPDB SMP:00045 NCBI chr2A:69,363,229...69,430,182
Ensembl chr2A:70,488,763...70,551,141 		JBrowse link
G GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase ISO SMPDB SMP:00045 NCBI chr 9:36,064,128...36,107,822
Ensembl chr 9:36,867,096...36,926,588 		JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 ISO SMPDB SMP:00045 NCBI chr 5:137,362,575...137,375,079
Ensembl chr 5:143,464,056...143,484,857 		JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO SMPDB SMP:00045 NCBI chr14:33,371,603...33,388,098
Ensembl chr14:51,655,182...51,671,619 		JBrowse link
G HK1 hexokinase 1 ISO SMPDB SMP:00045 NCBI chr10:65,786,940...65,870,204
Ensembl chr10:68,289,288...68,401,045 		JBrowse link
G LOC100986229 CUGBP Elav-like family member 6 ISO SMPDB SMP:00045 NCBI chr15:51,235,123...51,326,832
Ensembl chr15:70,057,943...70,090,688
Ensembl chr15:70,057,943...70,090,688 		JBrowse link
G NAGK N-acetylglucosamine kinase ISO SMPDB SMP:00045 NCBI chr2A:71,114,832...71,125,182
Ensembl chr2A:72,616,077...72,626,435 		JBrowse link
G NANP N-acetylneuraminic acid phosphatase ISO SMPDB SMP:00045 NCBI chr20:25,566,464...25,576,960
Ensembl chr20:25,970,274...25,981,685 		JBrowse link
G NANS N-acetylneuraminate synthase ISO SMPDB SMP:00045 NCBI chr 9:69,146,016...69,172,355
Ensembl chr 9:97,267,088...97,293,385 		JBrowse link
G NPL N-acetylneuraminate pyruvate lyase ISO SMPDB SMP:00045 NCBI chr 1:158,305,203...158,346,531
Ensembl chr 1:161,958,896...161,997,222 		JBrowse link
G PGM3 phosphoglucomutase 3 ISO SMPDB SMP:00045 NCBI chr 6:81,062,356...81,090,215
Ensembl chr 6:84,336,092...84,364,515 		JBrowse link
G RENBP renin binding protein ISO SMPDB SMP:00045 NCBI chr  X:143,490,103...143,499,487
Ensembl chr  X:153,376,847...153,386,214 		JBrowse link
G SLC17A5 solute carrier family 17 member 5 ISO SMPDB SMP:00045 NCBI chr 6:71,404,354...71,477,511
Ensembl chr 6:74,702,447...74,760,557 		JBrowse link
G UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 ISO SMPDB SMP:00045 NCBI chr 1:137,978,615...138,016,098
Ensembl chr 1:141,775,920...141,812,852 		JBrowse link
angiotensin (1-7) signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme ISO RGD PMID:10642323 PMID:15283675 RGD:1581953 RGD:1598433 NCBI chr17:57,556,294...57,577,294
Ensembl chr17:62,702,341...62,733,853 		JBrowse link
G ACE2 angiotensin converting enzyme 2 ISO RGD PMID:15638741 RGD:1581742 NCBI chr  X:8,189,267...8,229,415
Ensembl chr  X:15,470,896...15,510,891 		JBrowse link
G AGT angiotensinogen ISO RGD PMID:15951342 RGD:1581938 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044 		JBrowse link
G MAS1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:15951342 PMID:16520407 RGD:1581931 RGD:1581938 NCBI chr 6:157,774,098...157,799,983
Ensembl chr 6:162,801,416...162,802,393 		JBrowse link
G MME membrane metalloendopeptidase ISO RGD PMID:10642323 PMID:15638741 PMID:16520407 RGD:1581742 RGD:1581931 RGD:1581953 NCBI chr 3:152,085,694...152,240,148
Ensembl chr 3:160,197,566...160,292,119 		JBrowse link
angiotensin II signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme ISO RGD PMID:15638741 RGD:1581742 NCBI chr17:57,556,294...57,577,294
Ensembl chr17:62,702,341...62,733,853 		JBrowse link
G AGT angiotensinogen ISO RGD PMID:16141358 RGD:1581847 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044 		JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:15590154 RGD:1579760 NCBI chr 3:145,722,475...145,767,550
Ensembl chr 3:153,341,947...153,345,380 		JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:14657020 RGD:1566502 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685 		JBrowse link
G CCL2 C-C motif chemokine ligand 2 ISO RGD PMID:14684844 RGD:1582323 NCBI chr17:22,528,154...22,530,091
Ensembl chr17:22,820,890...22,823,384 		JBrowse link
G CMA1 chymase 1 ISO RGD PMID:15638741 PMID:15869764 RGD:1581742 RGD:1581745 NCBI chr14:5,277,269...5,280,335
Ensembl chr14:23,400,345...23,403,548 		JBrowse link
G JAK2 Janus kinase 2 ISO RGD PMID:16269269 RGD:1600094 NCBI chr 9:4,820,303...4,971,867
Ensembl chr 9:5,006,271...5,156,626 		JBrowse link
G OLR1 oxidized low density lipoprotein receptor 1 ISO RGD PMID:12661921 RGD:1580992 NCBI chr12:10,196,712...10,210,432
Ensembl chr12:10,445,202...10,461,071 		JBrowse link
G PDPK1 3-phosphoinositide dependent protein kinase 1 ISO RGD PMID:14585963 RGD:1581775 NCBI chr16:1,394,447...1,463,735 JBrowse link
G PLA2G6 phospholipase A2 group VI ISO RGD PMID:17613534 RGD:12910844 NCBI chr22:18,998,060...19,094,507
Ensembl chr22:36,849,794...36,919,509
Ensembl chr22:36,849,794...36,919,509 		JBrowse link
G PRKCZ protein kinase C zeta ISO RGD PMID:16113073 RGD:1642674 NCBI chr 1:763,942...901,531
Ensembl chr 1:1,920,219...2,045,855 		JBrowse link
angiotensin II signaling pathway via AT1 receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:16141358 RGD:1581847 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044 		JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:9287353 PMID:10977869 PMID:12446719 PMID:14559250 RGD:1581825 RGD:2316188 RGD:5133683 RGD:629553 NCBI chr 3:145,722,475...145,767,550
Ensembl chr 3:153,341,947...153,345,380 		JBrowse link
G AGTRAP angiotensin II receptor associated protein ISO RGD PMID:17875818 RGD:2314353 NCBI chr 1:10,498,245...10,512,906
Ensembl chr 1:11,715,672...11,730,326 		JBrowse link
G ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 ISO RGD PMID:14559250 RGD:2316188 NCBI chr11:67,763,944...67,831,728
Ensembl chr11:70,985,926...71,028,342 		JBrowse link
G ARRB1 arrestin beta 1 ISO RGD PMID:16304060 RGD:5133417 NCBI chr11:70,319,935...70,411,276
Ensembl chr11:73,630,276...73,654,155 		JBrowse link
G ARRB2 arrestin beta 2 ISO RGD PMID:16304060 RGD:5133417 NCBI chr17:4,766,616...4,777,253
Ensembl chr17:4,757,048...4,767,517 		JBrowse link
G GNA11 G protein subunit alpha 11 ISO RGD PMID:16141358 RGD:1581847 NCBI chr19:2,120,398...2,149,161
Ensembl chr19:3,074,483...3,102,124 		JBrowse link
G GRK2 G protein-coupled receptor kinase 2 ISO RGD PMID:16304060 RGD:5133417 NCBI chr11:62,624,647...62,644,846
Ensembl chr11:65,939,164...65,959,066 		JBrowse link
G GRK3 G protein-coupled receptor kinase 3 ISO RGD PMID:16304060 RGD:5133417 NCBI chr22:6,579,664...6,789,846
Ensembl chr22:24,353,533...24,509,560 		JBrowse link
G GRK5 G protein-coupled receptor kinase 5 ISO RGD PMID:16304060 RGD:5133417 NCBI chr10:115,776,236...116,026,221
Ensembl chr10:119,200,688...119,450,809 		JBrowse link
G GRK6 G protein-coupled receptor kinase 6 ISO RGD PMID:16304060 RGD:5133417 NCBI chr 5:172,704,978...172,744,907
Ensembl chr 5:179,790,662...179,807,410 		JBrowse link
G JAK2 Janus kinase 2 ISO RGD PMID:9287353 PMID:9314843 RGD:5133683 RGD:6478796 NCBI chr 9:4,820,303...4,971,867
Ensembl chr 9:5,006,271...5,156,626 		JBrowse link
G LOC100986730 guanine nucleotide-binding protein G(q) subunit alpha ISO RGD PMID:16141358 RGD:1581847 NCBI chr 9:46,816,409...47,129,116
Ensembl chr 9:76,575,815...76,773,849 		JBrowse link
G RGS2 regulator of G protein signaling 2 ISO RGD PMID:12588881 RGD:5133418 NCBI chr 1:168,273,112...168,276,348
Ensembl chr 1:172,566,701...172,569,955 		JBrowse link
G TYK2 tyrosine kinase 2 ISO RGD PMID:9314843 RGD:6478796 NCBI chr19:9,901,612...9,932,623
Ensembl chr19:10,565,490...10,594,541 		JBrowse link
angiotensin II signaling pathway via AT2 receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:16286564 PMID:16286568 PMID:22949090 RGD:1582434 RGD:1582435 RGD:7401256 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044 		JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:10977869 PMID:22949090 RGD:1581825 RGD:7401256 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685 		JBrowse link
G CNKSR1 connector enhancer of kinase suppressor of Ras 1 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 1:25,438,092...25,450,953
Ensembl chr 1:26,505,513...26,517,225 		JBrowse link
G DUSP1 dual specificity phosphatase 1 ISO RGD PMID:18804122 RGD:5133675 NCBI chr 5:168,121,536...168,124,671
Ensembl chr 5:175,032,803...175,035,960 		JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:20889352 RGD:5133679 NCBI chr12:32,811,533...32,834,958
Ensembl chr12:33,063,434...33,084,994 		JBrowse link
G GNAI2 G protein subunit alpha i2 ISO RGD PMID:22949090 RGD:7401256 NCBI chr 3:50,154,731...50,187,948
Ensembl chr 3:51,398,981...51,421,988 		JBrowse link
G GNAI3 G protein subunit alpha i3 ISO RGD PMID:22949090 RGD:7401256 NCBI chr 1:111,925,668...111,971,941
Ensembl chr 1:111,154,060...111,198,768 		JBrowse link
G MTUS1 microtubule associated scaffold protein 1 ISO RGD PMID:20889352 RGD:5133679 NCBI chr 8:16,863,307...17,020,684 JBrowse link
G PTPN6 protein tyrosine phosphatase non-receptor type 6 ISO RGD PMID:18804122 RGD:5133675 NCBI chr12:7,075,879...7,093,041
Ensembl chr12:6,991,099...7,008,830 		JBrowse link
G SLC9A6 solute carrier family 9 member A6 ISO RGD PMID:20889352 RGD:5133679 NCBI chr  X:125,099,378...125,171,161
Ensembl chr  X:135,378,094...135,439,781 		JBrowse link
G TIMP3 TIMP metallopeptidase inhibitor 3 ISO RGD PMID:20889352 RGD:5133679 NCBI chr22:13,811,297...13,872,799
Ensembl chr22:31,662,562...31,723,964 		JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 ISO RGD PMID:20889352 RGD:5133679 NCBI chr11:108,938,414...109,133,819
Ensembl chr11:112,780,380...112,977,164 		JBrowse link
angiotensin III signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11295571 RGD:1582124 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044 		JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:11295571 RGD:1582124 NCBI chr 3:145,722,475...145,767,550
Ensembl chr 3:153,341,947...153,345,380 		JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:11295571 RGD:1582124 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685 		JBrowse link
G ENPEP glutamyl aminopeptidase ISO RGD PMID:15638741 PMID:16537183 RGD:1581649 RGD:1581742 NCBI chr 4:102,969,397...103,056,978
Ensembl chr 4:113,532,126...113,620,654 		JBrowse link
angiotensin III signaling pathway via AT1 receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11100981 RGD:1582152 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044 		JBrowse link
G AGTR1 angiotensin II receptor type 1 ISO RGD PMID:11100981 RGD:1582152 NCBI chr 3:145,722,475...145,767,550
Ensembl chr 3:153,341,947...153,345,380 		JBrowse link
angiotensin III signaling pathway via AT2 receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:16380540 RGD:1582118 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044 		JBrowse link
G AGTR2 angiotensin II receptor type 2 ISO RGD PMID:16380540 RGD:1582118 NCBI chr  X:105,252,903...105,257,171
Ensembl chr  X:115,671,594...115,672,685 		JBrowse link
angiotensin IV signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:11282364 RGD:1582105 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044 		JBrowse link
G ANPEP alanyl aminopeptidase, membrane ISO RGD PMID:15638741 PMID:16537183 RGD:1581649 RGD:1581742 NCBI chr15:68,479,349...68,509,238
Ensembl chr15:87,681,826...87,703,713 		JBrowse link
G LNPEP leucyl and cystinyl aminopeptidase ISO RGD PMID:11282364 PMID:12591177 RGD:1581864 RGD:1582105 NCBI chr 5:92,247,060...92,348,900
Ensembl chr 5:97,842,110...97,893,876 		JBrowse link
G RNPEP arginyl aminopeptidase ISO RGD PMID:16537183 RGD:1581649 NCBI chr 1:177,579,349...177,602,865
Ensembl chr 1:181,880,404...181,903,906 		JBrowse link
angiotensin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGT angiotensinogen ISO RGD PMID:12676165 RGD:1566511 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044 		JBrowse link
arachidonic acid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type ISO SMPDB SMP:00075 NCBI chr17:7,026,839...7,041,598
Ensembl chr17:7,014,591...7,029,602 		JBrowse link
G ALOX12B arachidonate 12-lipoxygenase, 12R type ISO SMPDB SMP:00075 NCBI chr17:43,569,858...43,588,039
Ensembl chr17:48,302,450...48,317,029 		JBrowse link
G ALOX15 arachidonate 15-lipoxygenase ISO SMPDB SMP:00075 NCBI chr17:4,686,339...4,696,877
Ensembl chr17:4,677,125...4,687,669 		JBrowse link
G ALOX5 arachidonate 5-lipoxygenase ISO SMPDB SMP:00075 NCBI chr10:42,461,398...42,531,576
Ensembl chr10:45,639,946...45,710,016 		JBrowse link
G CBR1 carbonyl reductase 1 ISO SMPDB SMP:00075 NCBI chr21:22,440,726...22,443,950
Ensembl chr21:35,800,177...35,803,458 		JBrowse link
G CYP2B6 cytochrome P450 family 2 subfamily B member 6 ISO SMPDB SMP:00075 NCBI chr19:38,003,083...38,028,980
Ensembl chr19:46,509,370...46,534,672 		JBrowse link
G CYP2C8 cytochrome P450 family 2 subfamily C member 8 ISO SMPDB SMP:00075 NCBI chr10:91,646,387...91,679,998
Ensembl chr10:95,157,661...95,186,620 		JBrowse link
G CYP2E1 cytochrome P450 family 2 subfamily E member 1 ISO SMPDB SMP:00075 Ensembl chr10:134,839,025...134,852,719 JBrowse link
G CYP2J2 cytochrome P450 family 2 subfamily J member 2 ISO SMPDB SMP:00075 NCBI chr 1:59,151,079...59,184,625
Ensembl chr 1:60,856,269...60,889,810 		JBrowse link
G CYP2U1 cytochrome P450 family 2 subfamily U member 1 ISO SMPDB SMP:00075 NCBI chr 4:100,436,365...100,458,845
Ensembl chr 4:111,009,198...111,031,269 		JBrowse link
G CYP4A11 cytochrome P450 family 4 subfamily A member 11 ISO SMPDB SMP:00075 NCBI chr 1:46,228,434...46,240,736
Ensembl chr 1:47,583,564...47,594,870 		JBrowse link
G CYP4F3 cytochrome P450 family 4 subfamily F member 3 ISO SMPDB SMP:00075 NCBI chr19:15,162,886...15,182,334
Ensembl chr19:16,146,664...16,165,869 		JBrowse link
G CYP4F8 cytochrome P450 family 4 subfamily F member 8 ISO SMPDB SMP:00075 NCBI chr19:15,134,029...15,150,378
Ensembl chr19:16,118,830...16,133,182 		JBrowse link
G EPHX2 epoxide hydrolase 2 ISO SMPDB SMP:00075 NCBI chr 8:26,761,090...26,818,436
Ensembl chr 8:23,964,094...24,017,749 		JBrowse link
G GGT1 gamma-glutamyltransferase 1 ISO SMPDB SMP:00075 NCBI chr22:5,424,334...5,469,705 JBrowse link
G GPX1 glutathione peroxidase 1 ISO SMPDB SMP:00075 NCBI chr 3:49,280,038...49,281,455
Ensembl chr 3:50,360,947...50,361,826 		JBrowse link
G LOC100971127 arachidonate 15-lipoxygenase type B ISO SMPDB SMP:00075 NCBI chr17:43,609,146...43,619,713
Ensembl chr17:48,340,777...48,350,808 		JBrowse link
G LTA4H leukotriene A4 hydrolase ISO SMPDB SMP:00075 NCBI chr12:93,589,758...93,624,529
Ensembl chr12:96,978,203...97,012,427 		JBrowse link
G LTC4S leukotriene C4 synthase ISO SMPDB SMP:00075 NCBI chr 5:174,946,346...174,950,805 JBrowse link
G PRXL2B peroxiredoxin like 2B ISO SMPDB SMP:00075 NCBI chr 1:1,319,718...1,324,409 JBrowse link
G PTGDS prostaglandin D2 synthase ISO SMPDB SMP:00075 NCBI chr 9:108,037,994...108,042,136
Ensembl chr 9:137,006,601...137,009,680 		JBrowse link
G PTGES prostaglandin E synthase ISO SMPDB SMP:00075 NCBI chr 9:100,865,702...100,880,408
Ensembl chr 9:129,522,547...129,537,020 		JBrowse link
G PTGIS prostaglandin I2 synthase ISO SMPDB SMP:00075 NCBI chr20:45,841,238...45,905,641
Ensembl chr20:46,905,665...46,971,612 		JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 ISO SMPDB SMP:00075 NCBI chr 9:93,495,365...93,517,557
Ensembl chr 9:121,837,095...121,859,283 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO SMPDB SMP:00075 NCBI chr 1:162,205,534...162,214,130
Ensembl chr 1:166,355,845...166,364,519 		JBrowse link
G TBXAS1 thromboxane A synthase 1 ISO SMPDB SMP:00075 NCBI chr 7:131,772,947...131,958,647
Ensembl chr 7:144,255,211...144,439,523 		JBrowse link
arginine and proline metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 ISO SMPDB SMP:00020 NCBI chr 1:17,829,723...17,861,008
Ensembl chr 1:18,878,421...18,909,615 		JBrowse link
G ARG1 arginase 1 ISO SMPDB SMP:00020 NCBI chr 6:129,372,747...129,383,880
Ensembl chr 6:133,479,966...133,491,162 		JBrowse link
G ASL argininosuccinate lyase ISO SMPDB SMP:00020 NCBI chr 7:59,971,529...59,988,722
Ensembl chr 7:73,142,842...73,157,472 		JBrowse link
G ASS1 argininosuccinate synthase 1 ISO SMPDB SMP:00020 NCBI chr 9:101,569,442...101,625,899
Ensembl chr 9:130,219,993...130,276,036 		JBrowse link
G CKB creatine kinase B ISO SMPDB SMP:00020 NCBI chr14:84,145,931...84,149,093 JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 ISO SMPDB SMP:00020 NCBI chr2B:97,735,486...97,936,623
Ensembl chr2B:216,136,857...216,337,728 		JBrowse link
G DAO D-amino acid oxidase ISO SMPDB SMP:00020 NCBI chr12:106,453,807...106,475,409
Ensembl chr12:109,849,995...109,870,065 		JBrowse link
G EPRS1 glutamyl-prolyl-tRNA synthetase 1 ISO SMPDB SMP:00020 NCBI chr 1:195,537,319...195,618,257
Ensembl chr 1:200,575,259...200,656,197 		JBrowse link
G GAMT guanidinoacetate N-methyltransferase ISO SMPDB SMP:00020 Ensembl chr19:1,371,312...1,375,461 JBrowse link
G GATM glycine amidinotransferase ISO SMPDB SMP:00020 NCBI chr15:24,309,045...24,326,673
Ensembl chr15:42,639,597...42,657,209 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 ISO SMPDB SMP:00020 NCBI chr10:83,498,338...83,540,730 JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO SMPDB SMP:00020 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178 		JBrowse link
G NOS1 nitric oxide synthase 1 ISO SMPDB SMP:00020 NCBI chr12:114,784,232...114,938,385
Ensembl chr12:118,163,655...118,314,005 		JBrowse link
G OAT ornithine aminotransferase ISO SMPDB SMP:00020 NCBI chr10:120,955,805...120,977,484
Ensembl chr10:125,224,032...125,245,504 		JBrowse link
G OTC ornithine transcarbamylase ISO SMPDB SMP:00020 NCBI chr  X:30,796,828...30,868,144
Ensembl chr  X:38,505,232...38,575,819 		JBrowse link
G P4HA3 prolyl 4-hydroxylase subunit alpha 3 ISO SMPDB SMP:00020 NCBI chr11:69,333,199...69,385,012
Ensembl chr11:72,647,004...72,691,294 		JBrowse link
G PRODH proline dehydrogenase 1 ISO SMPDB SMP:00020 NCBI chr22:1,654,019...1,678,389 JBrowse link
G PYCR2 pyrroline-5-carboxylate reductase 2 ISO SMPDB SMP:00020 NCBI chr 1:201,381,270...201,385,703
Ensembl chr 1:206,381,539...206,386,002 		JBrowse link
G RARS2 arginyl-tRNA synthetase 2, mitochondrial ISO SMPDB SMP:00020 NCBI chr 6:85,391,061...85,466,888
Ensembl chr 6:88,665,543...88,741,371 		JBrowse link
G SLC25A15 solute carrier family 25 member 15 ISO SMPDB SMP:00020 NCBI chr13:21,996,153...22,066,574
Ensembl chr13:40,589,689...40,608,994 		JBrowse link
aryl hydrocarbon receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor ISO RGD PMID:10639156 RGD:1300277 NCBI chr 7:17,949,254...17,998,737
Ensembl chr 7:17,278,637...17,326,171 		JBrowse link
G ARNT aryl hydrocarbon receptor nuclear translocator ISO RGD PMID:1317062 RGD:41410437 NCBI chr 1:126,160,017...126,226,222
Ensembl chr 1:129,809,431...129,875,629 		JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 ISO RGD PMID:12859947 RGD:631760 NCBI chr15:59,376,993...59,573,925 JBrowse link
beta-alanine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO SMPDB SMP:00007 NCBI chr16:7,609,282...7,718,049
Ensembl chr16:8,888,178...8,958,420 		JBrowse link
G ALDH2 aldehyde dehydrogenase 2 family member ISO SMPDB SMP:00007 NCBI chr12:109,343,020...109,385,060
Ensembl chr12:112,734,243...112,776,471 		JBrowse link
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 ISO SMPDB SMP:00007 NCBI chr14:54,616,531...54,643,346
Ensembl chr14:73,472,255...73,495,734 		JBrowse link
G CNDP1 carnosine dipeptidase 1 ISO SMPDB SMP:00007 NCBI chr18:67,920,453...67,982,843
Ensembl chr18:71,162,331...71,188,879
Ensembl chr18:71,162,331...71,188,879 		JBrowse link
G DPYD dihydropyrimidine dehydrogenase ISO SMPDB SMP:00007 NCBI chr 1:99,736,145...100,576,663
Ensembl chr 1:98,457,934...99,300,100 		JBrowse link
G DPYS dihydropyrimidinase ISO SMPDB SMP:00007 NCBI chr 8:101,008,090...101,096,234
Ensembl chr 8:103,160,922...103,248,303 		JBrowse link
G GAD1 glutamate decarboxylase 1 ISO SMPDB SMP:00007 NCBI chr2B:58,100,623...58,145,045
Ensembl chr2B:175,558,538...175,602,944 		JBrowse link
G UPB1 beta-ureidopropionase 1 ISO SMPDB SMP:00007 NCBI chr22:5,300,686...5,332,735
Ensembl chr22:22,166,370...22,197,360 		JBrowse link
bile acid biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOX2 acyl-CoA oxidase 2 ISO SMPDB SMP:00035 NCBI chr 3:58,442,532...58,474,601
Ensembl chr 3:59,852,771...59,884,548 		JBrowse link
G AKR1C4 aldo-keto reductase family 1 member C4 ISO SMPDB SMP:00035 NCBI chr10:5,247,368...5,271,554
Ensembl chr10:5,234,188...5,258,201 		JBrowse link
G AKR1D1 aldo-keto reductase family 1 member D1 ISO SMPDB SMP:00035 NCBI chr 7:130,023,017...130,076,397
Ensembl chr 7:142,525,467...142,571,331 		JBrowse link
G AMACR alpha-methylacyl-CoA racemase ISO SMPDB SMP:00035 NCBI chr 5:76,336,631...76,358,724
Ensembl chr 5:81,687,891...81,742,003 		JBrowse link
G BAAT bile acid-CoA:amino acid N-acyltransferase ISO SMPDB SMP:00035 NCBI chr 9:72,568,002...72,593,179
Ensembl chr 9:100,563,040...100,586,189 		JBrowse link
G CH25H cholesterol 25-hydroxylase ISO SMPDB SMP:00035 NCBI chr10:85,930,638...85,932,065
Ensembl chr10:89,471,441...89,472,259 		JBrowse link
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 ISO SMPDB SMP:00035 NCBI chr2B:106,042,235...106,076,840
Ensembl chr2B:224,637,238...224,671,474 		JBrowse link
G CYP39A1 cytochrome P450 family 39 subfamily A member 1 ISO SMPDB SMP:00035 NCBI chr 6:46,132,584...46,235,578
Ensembl chr 6:47,404,969...47,507,600 		JBrowse link
G CYP46A1 cytochrome P450 family 46 subfamily A member 1 ISO SMPDB SMP:00035 NCBI chr14:80,309,698...80,352,181
Ensembl chr14:99,628,511...99,671,218 		JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 ISO SMPDB SMP:00035 NCBI chr 8:54,942,509...54,952,500
Ensembl chr 8:56,593,799...56,604,037 		JBrowse link
G CYP7B1 cytochrome P450 family 7 subfamily B member 1 ISO SMPDB SMP:00035 NCBI chr 8:61,135,307...61,335,838
Ensembl chr 8:62,806,637...63,006,386 		JBrowse link
G CYP8B1 cytochrome P450 family 8 subfamily B member 1 ISO SMPDB SMP:00035 NCBI chr 3:42,775,679...42,779,440
Ensembl chr 3:43,824,423...43,842,716 		JBrowse link
G HSD17B4 hydroxysteroid 17-beta dehydrogenase 4 ISO SMPDB SMP:00035 NCBI chr 5:114,842,892...114,928,559
Ensembl chr 5:120,628,605...120,713,860 		JBrowse link
G HSD3B7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ISO SMPDB SMP:00035 NCBI chr16:23,979,487...23,984,225
Ensembl chr16:31,352,322...31,356,803 		JBrowse link
G LIPA lipase A, lysosomal acid type ISO SMPDB SMP:00035 NCBI chr10:85,938,240...85,976,610
Ensembl chr10:89,477,082...89,516,874 		JBrowse link
G SCP2 sterol carrier protein 2 ISO SMPDB SMP:00035 NCBI chr 1:52,195,491...52,324,227
Ensembl chr 1:53,797,254...53,924,939 		JBrowse link
G SLC27A5 solute carrier family 27 member 5 ISO SMPDB SMP:00035 NCBI chr19:55,507,455...55,520,448
Ensembl chr19:64,329,567...64,342,630 		JBrowse link
biotin metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTD biotinidase ISO SMPDB SMP:00066 NCBI chr 3:15,526,339...15,575,475
Ensembl chr 3:15,863,489...15,907,497 		JBrowse link
G HLCS holocarboxylase synthetase ISO SMPDB SMP:00066 NCBI chr21:23,112,477...23,352,121
Ensembl chr21:36,470,872...36,655,688 		JBrowse link
G SPCS1 signal peptidase complex subunit 1 ISO SMPDB SMP:00066 NCBI chr 3:52,646,427...52,648,786
Ensembl chr 3:53,873,921...53,876,229 		JBrowse link
butanoate metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADS acyl-CoA dehydrogenase short chain ISO SMPDB SMP:00073 NCBI chr12:118,309,303...118,323,489
Ensembl chr12:121,682,113...121,696,376 		JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 ISO SMPDB SMP:00073 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787 		JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 ISO SMPDB SMP:00073 Ensembl chr10:134,278,388...134,289,308 JBrowse link
G HADH hydroxyacyl-CoA dehydrogenase ISO SMPDB SMP:00073 NCBI chr 4:100,495,205...100,540,589
Ensembl chr 4:111,067,336...111,113,868 		JBrowse link
G HMGCL 3-hydroxy-3-methylglutaryl-CoA lyase ISO SMPDB SMP:00073 NCBI chr 1:22,993,489...23,017,307
Ensembl chr 1:23,977,723...24,001,150 		JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO SMPDB SMP:00073 NCBI chr 1:82,778,489...82,798,987
Ensembl chr 1:117,775,770...117,796,679 		JBrowse link
G LOC100972336 acyl-CoA synthetase medium chain family member 1 ISO SMPDB SMP:00073 NCBI chr16:17,676,986...17,735,611 JBrowse link
G OXCT1 3-oxoacid CoA-transferase 1 ISO SMPDB SMP:00073 NCBI chr 5:68,528,765...68,668,305
Ensembl chr 5:73,563,758...73,710,316 		JBrowse link
C21-steroid hormone biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP11B1 cytochrome P450 family 11 subfamily B member 1 ISO RGD PMID:11832364 RGD:727991 NCBI chr 8:139,584,976...139,592,466
Ensembl chr 8:142,629,127...142,634,654 		JBrowse link
G CYP11B2 cytochrome P450 family 11 subfamily B member 2 ISO RGD PMID:7829497 RGD:1299585 NCBI chr 8:139,622,632...139,630,014
Ensembl chr 8:142,666,534...142,672,575 		JBrowse link
cardiolipin biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRLS1 cardiolipin synthase 1 ISO RGD PMID:24769127 RGD:10400850 NCBI chr20:6,003,915...6,037,853
Ensembl chr20:5,786,880...5,820,285 		JBrowse link
G PGS1 phosphatidylglycerophosphate synthase 1 ISO RGD PMID:24769127 RGD:10400850 NCBI chr17:72,455,008...72,501,058
Ensembl chr17:78,003,519...78,049,331 		JBrowse link
G PTPMT1 protein tyrosine phosphatase mitochondrial 1 ISO RGD PMID:24769127 RGD:10400850 NCBI chr11:47,515,304...47,521,529
Ensembl chr11:48,064,931...48,073,474 		JBrowse link
G TAMM41 TAM41 mitochondrial translocator assembly and maintenance homolog ISO RGD PMID:24769127 RGD:10400850 NCBI chr 3:11,655,271...11,780,497
Ensembl chr 3:12,068,067...12,124,535 		JBrowse link
cardiolipin metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100986481 cytochrome c ISO RGD PMID:24769127 RGD:10400850 NCBI chr 7:25,784,900...25,791,598
Ensembl chr 7:25,396,013...25,398,549 		JBrowse link
G LOC100991599 creatine kinase U-type, mitochondrial ISO RGD PMID:24769127 RGD:10400850 NCBI chr15:22,654,349...22,660,890 JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 ISO RGD PMID:24769127 RGD:10400850 Ensembl chr16:389,068...393,976 JBrowse link
G TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase ISO RGD PMID:24769127 RGD:10400850 NCBI chr  X:143,853,054...143,863,491
Ensembl chr  X:153,725,294...153,734,046 		JBrowse link
carnitine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH9A1 aldehyde dehydrogenase 9 family member A1 ISO SMPDB SMP:00465 NCBI chr 1:141,094,261...141,130,613
Ensembl chr 1:144,883,839...144,919,670 		JBrowse link
G BBOX1 gamma-butyrobetaine hydroxylase 1 ISO SMPDB SMP:00465 NCBI chr11:26,995,120...27,083,832
Ensembl chr11:26,898,529...26,986,705 		JBrowse link
G SETD7 SET domain containing 7, histone lysine methyltransferase ISO SMPDB SMP:00465 NCBI chr 4:131,869,999...131,921,342
Ensembl chr 4:143,167,190...143,227,732 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 ISO SMPDB SMP:00465 NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220 		JBrowse link
G TMLHE trimethyllysine hydroxylase, epsilon ISO SMPDB SMP:00465 NCBI chr  X:144,956,906...145,081,204 JBrowse link
catecholamine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBH dopamine beta-hydroxylase ISO SMPDB SMP:00012 NCBI chr 9:104,761,504...104,784,445
Ensembl chr 9:133,371,821...133,393,697 		JBrowse link
G DDC dopa decarboxylase ISO SMPDB SMP:00012 NCBI chr 7:51,101,169...51,206,031
Ensembl chr 7:51,345,228...51,449,710 		JBrowse link
G PNMT phenylethanolamine N-methyltransferase ISO SMPDB SMP:00012 NCBI chr17:17,618,399...17,620,691
Ensembl chr17:17,835,277...17,837,180 		JBrowse link
G TH tyrosine hydroxylase ISO SMPDB SMP:00012 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433 		JBrowse link
cholesterol biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT2 acetyl-CoA acetyltransferase 2 ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr 6:157,644,894...157,661,965
Ensembl chr 6:162,656,497...162,673,606 		JBrowse link
G CYP51A1 cytochrome P450 family 51 subfamily A member 1 ISO RGD
SMPDB		 PMID:7581240 PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 RGD:2316902 SMP:00023 NCBI chr 7:84,110,130...84,132,870
Ensembl chr 7:97,708,806...97,729,824 		JBrowse link
G DHCR24 24-dehydrocholesterol reductase ISO SMPDB
RGD		 PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 SMP:00023 NCBI chr 1:54,126,170...54,163,713
Ensembl chr 1:55,714,693...55,754,698 		JBrowse link
G DHCR7 7-dehydrocholesterol reductase ISO RGD PMID:9831636 PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 RGD:2316918 NCBI chr11:66,450,230...66,464,214
Ensembl chr11:69,721,741...69,735,715 		JBrowse link
G EBP EBP cholestenol delta-isomerase ISO SMPDB
RGD		 PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 SMP:00023 NCBI chr  X:40,820,042...40,826,957 JBrowse link
G FDFT1 farnesyl-diphosphate farnesyltransferase 1 ISO SMPDB
RGD		 PMID:16440058 PMID:16876788 RGD:1626611 RGD:2316857 SMP:00023 NCBI chr 8:7,363,250...7,399,863 JBrowse link
G FDPS farnesyl diphosphate synthase ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr 1:130,653,316...130,665,196
Ensembl chr 1:134,258,968...134,270,237 		JBrowse link
G GGPS1 geranylgeranyl diphosphate synthase 1 ISO SMPDB SMP:00023 NCBI chr 1:210,874,385...210,888,647
Ensembl chr 1:215,888,966...215,902,845 		JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr 5:39,936,630...39,961,519
Ensembl chr 5:40,548,919...40,573,785 		JBrowse link
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr 5:67,067,001...67,091,786
Ensembl chr 5:72,116,228...72,141,050 		JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 ISO SMPDB SMP:00023 NCBI chr 1:138,204,544...138,226,689 JBrowse link
G IDI1 isopentenyl-diphosphate delta isomerase 1 ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr10:1,078,107...1,087,054
Ensembl chr10:1,124,920...1,133,234 		JBrowse link
G LBR lamin B receptor ISO RGD PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 NCBI chr 1:200,865,602...200,892,199
Ensembl chr 1:205,870,394...205,893,032 		JBrowse link
G LIPA lipase A, lysosomal acid type ISO SMPDB SMP:00023 NCBI chr10:85,938,240...85,976,610
Ensembl chr10:89,477,082...89,516,874 		JBrowse link
G LSS lanosterol synthase ISO RGD
SMPDB		 PMID:1429550 PMID:16440058 PMID:16876788 RGD:1626611 RGD:2316857 RGD:2316919 SMP:00023 NCBI chr21:32,535,564...32,571,379
Ensembl chr21:45,787,252...45,822,181 		JBrowse link
G MSMO1 methylsterol monooxygenase 1 ISO SMPDB SMP:00023 NCBI chr 4:157,523,099...157,538,508
Ensembl chr 4:169,606,809...169,622,212 		JBrowse link
G MVD mevalonate diphosphate decarboxylase ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr16:69,365,070...69,376,149
Ensembl chr16:89,025,572...89,036,964 		JBrowse link
G MVK mevalonate kinase ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr12:107,150,477...107,173,978
Ensembl chr12:110,544,991...110,568,524 		JBrowse link
G NSDHL NAD(P) dependent steroid dehydrogenase-like ISO SMPDB
RGD		 PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 SMP:00023 NCBI chr  X:142,405,340...142,443,723
Ensembl chr  X:152,324,553...152,362,931 		JBrowse link
G PMVK phosphomevalonate kinase ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr 1:130,273,246...130,286,614
Ensembl chr 1:133,882,840...133,894,818 		JBrowse link
G SC5D sterol-C5-desaturase ISO RGD
SMPDB		 PMID:7961720 PMID:12668600 PMID:16876788 RGD:2316857 RGD:2316868 RGD:2316911 SMP:00023 NCBI chr11:116,139,979...116,160,745
Ensembl chr11:120,063,743...120,078,386 		JBrowse link
G SOAT1 sterol O-acyltransferase 1 ISO SMPDB SMP:00023 NCBI chr 1:154,776,305...154,840,594
Ensembl chr 1:158,464,886...158,524,909 		JBrowse link
G SQLE squalene epoxidase ISO SMPDB
RGD		 PMID:16876788 RGD:2316857 SMP:00023 NCBI chr 8:121,684,269...121,708,131
Ensembl chr 8:124,435,668...124,459,441 		JBrowse link
G TM7SF2 transmembrane 7 superfamily member 2 ISO SMPDB SMP:00023 NCBI chr11:60,473,934...60,478,579
Ensembl chr11:63,812,769...63,816,812 		JBrowse link
choline metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHCY adenosylhomocysteinase ISO SMPDB SMP:00123 NCBI chr20:30,603,701...30,626,835
Ensembl chr20:31,738,007...31,760,803 		JBrowse link
G ALDH7A1 aldehyde dehydrogenase 7 family member A1 ISO SMPDB SMP:00123 NCBI chr 5:121,946,527...122,000,273
Ensembl chr 5:127,718,978...127,771,047 		JBrowse link
G BHMT betaine--homocysteine S-methyltransferase ISO SMPDB SMP:00123 NCBI chr 5:36,181,183...36,201,833
Ensembl chr 5:36,670,854...36,728,993 		JBrowse link
G CHDH choline dehydrogenase ISO SMPDB SMP:00123 NCBI chr 3:53,751,179...53,784,437
Ensembl chr 3:54,976,780...54,982,991 		JBrowse link
G MAT2A methionine adenosyltransferase 2A ISO SMPDB SMP:00123 NCBI chr2A:85,589,301...85,595,437
Ensembl chr2A:87,141,857...87,148,322 		JBrowse link
G MAT2B methionine adenosyltransferase 2 non-catalytic beta subunit ISO SMPDB SMP:00123 NCBI chr 5:158,879,425...158,895,690
Ensembl chr 5:165,656,086...165,672,176 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO SMPDB SMP:00123 NCBI chr 1:212,353,195...212,463,304
Ensembl chr 1:217,358,050...217,460,946 		JBrowse link
G PEMT phosphatidylethanolamine N-methyltransferase ISO SMPDB SMP:00123 NCBI chr17:33,703,800...33,790,470
Ensembl chr17:38,651,024...38,737,202 		JBrowse link
G SARDH sarcosine dehydrogenase ISO RGD PMID:9839943 RGD:634034 NCBI chr 9:104,786,774...104,864,480
Ensembl chr 9:133,398,806...133,473,642 		JBrowse link
citric acid cycle pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACO2 aconitase 2 ISO SMPDB
RGD		 PMID:9712727 RGD:2306877 SMP:00057 NCBI chr22:22,363,178...22,423,041
Ensembl chr22:40,450,276...40,510,200 		JBrowse link
G CS citrate synthase ISO RGD
SMPDB		 PMID:938457 PMID:9712727 RGD:2306828 RGD:2306877 SMP:00057 NCBI chr12:32,614,982...32,643,719
Ensembl chr12:32,867,225...32,895,854 		JBrowse link
G DLAT dihydrolipoamide S-acetyltransferase ISO SMPDB SMP:00057 NCBI chr11:106,910,857...106,950,851
Ensembl chr11:110,756,001...110,792,795 		JBrowse link
G DLD dihydrolipoamide dehydrogenase ISO SMPDB
RGD		 PMID:10672230 RGD:2306878 SMP:00057 NCBI chr 7:99,872,020...99,901,884
Ensembl chr 7:112,593,934...112,623,629 		JBrowse link
G DLST dihydrolipoamide S-succinyltransferase ISO SMPDB
RGD		 PMID:10672230 RGD:2306878 SMP:00057 NCBI chr14:55,433,358...55,455,876
Ensembl chr14:74,278,128...74,300,133 		JBrowse link
G FH fumarate hydratase ISO RGD
SMPDB		 PMID:938457 RGD:2306828 SMP:00057 NCBI chr 1:217,059,847...217,081,795
Ensembl chr 1:222,041,142...222,064,212 		JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ISO RGD
SMPDB		 PMID:938457 RGD:2306828 SMP:00057 NCBI chr15:57,078,588...57,099,934
Ensembl chr15:76,043,311...76,064,634 		JBrowse link
G IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta ISO RGD
SMPDB		 PMID:938457 RGD:2306828 SMP:00057 NCBI chr20:2,766,598...2,772,571
Ensembl chr20:2,529,510...2,535,570 		JBrowse link
G IDH3G isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ISO RGD
SMPDB		 PMID:938457 RGD:2306828 SMP:00057 NCBI chr  X:143,336,460...143,345,274
Ensembl chr  X:153,222,309...153,231,135 		JBrowse link
G MDH2 malate dehydrogenase 2 ISO SMPDB
RGD		 PMID:938457 RGD:2306828 SMP:00057 NCBI chr 7:67,953,759...67,973,270
Ensembl chr 7:82,497,800...82,516,526 		JBrowse link
G MPC1 mitochondrial pyruvate carrier 1 ISO SMPDB SMP:00057 NCBI chr 6:164,331,604...164,349,747 JBrowse link
G OGDH oxoglutarate dehydrogenase ISO RGD
SMPDB		 PMID:9712727 PMID:10672230 RGD:2306877 RGD:2306878 SMP:00057 NCBI chr 7:45,321,559...45,422,515
Ensembl chr 7:45,409,148...45,491,636 		JBrowse link
G PC pyruvate carboxylase ISO SMPDB SMP:00057 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396 		JBrowse link
G PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 ISO SMPDB SMP:00057 NCBI chr  X:11,967,944...11,985,837
Ensembl chr  X:19,330,508...19,348,443 		JBrowse link
G PDHB pyruvate dehydrogenase E1 subunit beta ISO SMPDB SMP:00057 NCBI chr 3:58,359,753...58,366,094
Ensembl chr 3:59,776,618...59,782,411 		JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B ISO SMPDB
RGD		 PMID:16143825 RGD:2306881 SMP:00057 NCBI chr 1:15,962,383...15,998,056
Ensembl chr 1:17,018,542...17,054,509 		JBrowse link
G SDHC succinate dehydrogenase complex subunit C ISO SMPDB
RGD		 PMID:16143825 RGD:2306881 SMP:00057 NCBI chr 1:136,724,663...136,773,038
Ensembl chr 1:140,635,685...140,682,736 		JBrowse link
G SDHD succinate dehydrogenase complex subunit D ISO SMPDB
RGD		 PMID:16143825 RGD:2306881 SMP:00057 NCBI chr11:106,973,256...106,982,237
Ensembl chr11:110,817,016...110,896,829 		JBrowse link
G SUCLA2 succinate-CoA ligase ADP-forming subunit beta ISO RGD PMID:17403370 RGD:2306915 NCBI chr13:29,095,062...29,189,618
Ensembl chr13:47,797,472...47,856,138 		JBrowse link
G SUCLG1 succinate-CoA ligase GDP/ADP-forming subunit alpha ISO SMPDB
RGD		 PMID:17403370 RGD:2306915 SMP:00057 NCBI chr2A:84,476,814...84,512,920
Ensembl chr2A:86,035,723...86,066,622 		JBrowse link
G SUCLG2 succinate-CoA ligase GDP-forming subunit beta ISO RGD
SMPDB		 PMID:17403370 RGD:2306915 SMP:00057 NCBI chr 3:67,277,348...67,563,181
Ensembl chr 3:68,647,738...68,931,891 		JBrowse link
cortisol biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:17926129 RGD:4892309 NCBI chr15:53,280,110...53,310,868
Ensembl chr15:72,901,286...72,931,164 		JBrowse link
G CYP11B1 cytochrome P450 family 11 subfamily B member 1 ISO RGD PMID:15583024 RGD:4889549 NCBI chr 8:139,584,976...139,592,466
Ensembl chr 8:142,629,127...142,634,654 		JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO RGD PMID:17926129 RGD:4892309 NCBI chr10:99,431,762...99,439,619
Ensembl chr10:102,896,376...102,901,514 		JBrowse link
G FDX1 ferredoxin 1 ISO RGD PMID:18821018 RGD:2325883 NCBI chr11:105,311,613...105,345,414 JBrowse link
G FDXR ferredoxin reductase ISO RGD PMID:18821018 RGD:2325883 NCBI chr17:68,808,123...68,818,642
Ensembl chr17:74,364,343...74,374,852 		JBrowse link
G LOC100982464 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 ISO RGD PMID:15583024 RGD:4889549 NCBI chr 1:83,130,065...83,156,996
Ensembl chr 1:118,128,493...118,153,124 		JBrowse link
G LOC100990437 NADPH--cytochrome P450 reductase ISO RGD PMID:17926129 RGD:4892309 NCBI chr 7:68,035,021...68,105,934
Ensembl chr 7:82,364,418...82,437,530 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:18821018 RGD:2325883 NCBI chr 8:37,446,334...37,454,102
Ensembl chr 8:34,623,201...34,629,544 		JBrowse link
creatine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CKM creatine kinase, M-type ISO RGD PMID:12069495 RGD:1359082 NCBI chr19:42,255,158...42,271,467
Ensembl chr19:50,854,556...50,870,366 		JBrowse link
G GAMT guanidinoacetate N-methyltransferase ISO RGD PMID:12069495 RGD:1359082 Ensembl chr19:1,371,312...1,375,461 JBrowse link
G GATM glycine amidinotransferase ISO RGD PMID:8021264 RGD:70746 NCBI chr15:24,309,045...24,326,673
Ensembl chr15:42,639,597...42,657,209 		JBrowse link
G SLC6A8 solute carrier family 6 member 8 ISO RGD PMID:12069495 RGD:1359082
cyclooxygenase mediated pathway of arachidonic acid metabolism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA1 annexin A1 ISO RGD PMID:18761105 RGD:8552898 NCBI chr 9:51,647,404...51,665,990
Ensembl chr 9:71,929,728...71,948,779 		JBrowse link
G MKNK1 MAPK interacting serine/threonine kinase 1 ISO RGD PMID:18761105 RGD:8552898 NCBI chr 1:45,859,888...45,906,840
Ensembl chr 1:47,215,693...47,262,317 		JBrowse link
G PLA2G4A phospholipase A2 group IVA ISO RGD PMID:18761105 PMID:22679221 RGD:8552712 RGD:8552898 NCBI chr 1:162,362,600...162,521,974
Ensembl chr 1:166,512,870...166,672,101 		JBrowse link
G PTGS1 prostaglandin-endoperoxide synthase 1 ISO RGD PMID:22679221 PMID:23063076 RGD:8552701 RGD:8552712 NCBI chr 9:93,495,365...93,517,557
Ensembl chr 9:121,837,095...121,859,283 		JBrowse link
G PTGS2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:22679221 PMID:23063076 RGD:8552701 RGD:8552712 NCBI chr 1:162,205,534...162,214,130
Ensembl chr 1:166,355,845...166,364,519 		JBrowse link
G VIM vimentin ISO RGD PMID:18761105 RGD:8552898 NCBI chr10:17,546,389...17,554,702
Ensembl chr10:17,818,285...17,826,642 		JBrowse link
cysteine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARS1 cysteinyl-tRNA synthetase 1 ISO SMPDB SMP:00013 NCBI chr11:3,026,787...3,083,170
Ensembl chr11:3,053,551...3,109,509 		JBrowse link
G CBS cystathionine beta-synthase ISO RGD PMID:9359866 RGD:1359024 NCBI chr21:29,361,519...29,385,610
Ensembl chr21:42,670,530...42,690,932 		JBrowse link
G CDO1 cysteine dioxygenase type 1 ISO SMPDB SMP:00013 NCBI chr 5:111,159,041...111,170,965
Ensembl chr 5:116,955,295...116,967,506 		JBrowse link
G CTH cystathionine gamma-lyase ISO RGD
SMPDB		 PMID:9359866 RGD:1359024 SMP:00013 NCBI chr 1:69,646,608...69,674,301
Ensembl chr 1:71,629,333...71,677,666 		JBrowse link
G CTNS cystinosin, lysosomal cystine transporter ISO SMPDB SMP:00013 NCBI chr17:3,686,903...3,711,857
Ensembl chr17:3,683,575...3,708,253 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit ISO SMPDB SMP:00013 NCBI chr 6:53,052,145...53,102,794
Ensembl chr 6:54,687,315...54,734,994 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit ISO SMPDB SMP:00013 NCBI chr 1:96,548,850...96,573,273
Ensembl chr 1:95,278,665...95,297,893 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO SMPDB SMP:00013 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178 		JBrowse link
G LDHAL6A lactate dehydrogenase A like 6A ISO SMPDB SMP:00013 NCBI chr11:18,493,842...18,517,691
Ensembl chr11:18,176,824...18,200,673 		JBrowse link
G MPST mercaptopyruvate sulfurtransferase ISO SMPDB SMP:00013 NCBI chr22:17,933,995...17,944,196
Ensembl chr22:35,770,209...35,780,250 		JBrowse link
cytochrome P450 monooxygenase mediated pathway of arachidonic acid metabolism term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP4A22 cytochrome P450 family 4 subfamily A member 22 ISO RGD PMID:12857783 RGD:1625451 NCBI chr 1:46,442,854...46,455,153
Ensembl chr 1:47,958,368...47,970,230 		JBrowse link
cytosolic iron-sulfur cluster protein assembly pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CIAO1 cytosolic iron-sulfur assembly component 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr2A:103,041,509...103,049,469
Ensembl chr2A:97,188,949...97,194,576 		JBrowse link
G CIAO2A cytosolic iron-sulfur assembly component 2A ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr15:43,025,577...43,047,013
Ensembl chr15:61,317,188...61,338,337 		JBrowse link
G CIAO2B cytosolic iron-sulfur assembly component 2B ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr16:47,247,278...47,249,617
Ensembl chr16:66,349,377...66,351,733 		JBrowse link
G CIAO3 cytosolic iron-sulfur assembly component 3 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 Ensembl chr16:742,818...754,087 JBrowse link
G CIAPIN1 cytokine induced apoptosis inhibitor 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr16:37,701,773...37,723,556
Ensembl chr16:56,835,024...56,856,502 		JBrowse link
G MMS19 MMS19 homolog, cytosolic iron-sulfur assembly component ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr10:94,080,690...94,120,811
Ensembl chr10:97,574,257...97,614,146 		JBrowse link
G NDOR1 NADPH dependent diflavin oxidoreductase 1 ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr 9:108,265,305...108,278,923
Ensembl chr 9:137,233,940...137,247,716 		JBrowse link
G NUBP1 NUBP iron-sulfur cluster assembly factor 1, cytosolic ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr16:9,681,800...9,708,673
Ensembl chr16:10,906,719...10,931,800 		JBrowse link
G NUBP2 NUBP iron-sulfur cluster assembly factor 2, cytosolic ISO RGD PMID:25245479 PMID:25583461 RGD:11554190 RGD:11554192 NCBI chr16:405,264...411,626 JBrowse link
de novo nicotinamide adenine dinucleotide biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NADSYN1 NAD synthetase 1 ISO RGD PMID:20007326 RGD:11099972 NCBI chr11:66,464,320...66,537,649
Ensembl chr11:69,735,871...69,788,953 		JBrowse link
G NMNAT1 nicotinamide nucleotide adenylyltransferase 1 ISO RGD PMID:20007326 RGD:11099972 NCBI chr 1:8,712,798...8,753,027
Ensembl chr 1:9,942,491...9,982,364 		JBrowse link
G NMNAT2 nicotinamide nucleotide adenylyltransferase 2 ISO RGD PMID:20007326 RGD:11099972 NCBI chr 1:158,768,949...158,948,711
Ensembl chr 1:162,929,609...163,105,524 		JBrowse link
G NMNAT3 nicotinamide nucleotide adenylyltransferase 3 ISO RGD PMID:20007326 RGD:11099972 NCBI chr 3:136,594,825...136,715,437 JBrowse link
G QPRT quinolinate phosphoribosyltransferase ISO RGD PMID:20007326 RGD:11099972
de novo purine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase ISO RGD PMID:20005278 RGD:5135488 NCBI chr22:21,249,920...21,271,749
Ensembl chr22:39,068,764...39,389,221 		JBrowse link
G ADSS1 adenylosuccinate synthase 1 ISO RGD PMID:10218106 RGD:5143930 Ensembl chr14:105,169,769...105,190,333 JBrowse link
G ADSS2 adenylosuccinate synthase 2 ISO RGD PMID:10218106 RGD:5143930 NCBI chr 1:220,020,480...220,063,658
Ensembl chr 1:225,401,544...225,444,984 		JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:16167529 RGD:5490520 NCBI chr 9:98,987,348...98,997,252
Ensembl chr 9:127,657,338...127,678,245 		JBrowse link
G AK2 adenylate kinase 2 ISO RGD PMID:16167529 RGD:5490520 NCBI chr 1:32,295,668...32,323,681
Ensembl chr 1:33,480,947...33,508,621 		JBrowse link
G AK3 adenylate kinase 3 ISO RGD PMID:16167529 RGD:5490520 NCBI chr 9:4,541,984...4,576,341
Ensembl chr 9:4,732,847...4,762,900 		JBrowse link
G AK4 adenylate kinase 4 ISO RGD PMID:16167529 RGD:5490520 NCBI chr 1:64,394,898...64,479,536
Ensembl chr 1:66,283,102...66,361,230 		JBrowse link
G AK5 adenylate kinase 5 ISO RGD PMID:16167529 RGD:5490520 NCBI chr 1:76,499,046...76,778,856
Ensembl chr 1:78,584,653...78,863,844 		JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:9332377 PMID:20005278 RGD:5135488 RGD:70804 NCBI chr2B:102,574,700...102,612,492
Ensembl chr2B:221,159,439...221,197,360 		JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:12450384 RGD:1547842 NCBI chr21:19,871,656...19,909,893
Ensembl chr21:33,244,457...33,282,331 		JBrowse link
G GMPS guanine monophosphate synthase ISO RGD PMID:20005278 RGD:5135488 NCBI chr 3:152,925,905...152,999,180
Ensembl chr 3:160,977,222...161,045,214 		JBrowse link
G IMPDH1 inosine monophosphate dehydrogenase 1 ISO RGD PMID:18295529 RGD:5144133 NCBI chr 7:120,382,719...120,400,417
Ensembl chr 7:133,036,328...133,053,580 		JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 ISO RGD PMID:18295529 RGD:5144133 NCBI chr 3:48,948,965...48,954,276
Ensembl chr 3:50,030,303...50,035,676 		JBrowse link
G PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase ISO RGD PMID:7742366 RGD:633692 NCBI chr 4:67,461,799...67,491,300
Ensembl chr 4:74,031,397...74,059,857 		JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:20005278 RGD:5135488 NCBI chr 4:67,491,407...67,533,822
Ensembl chr 4:74,059,966...74,102,002 		JBrowse link
G PRPS1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:20005278 RGD:5135488 NCBI chr  X:96,720,988...96,743,594
Ensembl chr  X:107,094,898...107,117,117 		JBrowse link
G PRPS1L1 phosphoribosyl pyrophosphate synthetase 1 like 1 ISO RGD PMID:20005278 RGD:5135488 NCBI chr 7:18,680,579...18,681,655 JBrowse link
G PRPS2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:20005278 RGD:5135488 NCBI chr  X:5,403,465...5,436,751
Ensembl chr  X:12,693,286...12,726,355 		JBrowse link
G TAF9 TATA-box binding protein associated factor 9 ISO RGD PMID:16167529 RGD:5490520 NCBI chr 5:44,630,503...44,635,760 JBrowse link
de novo pyrimidine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:15096496 RGD:5133412 NCBI chr2A:27,218,699...27,245,156
Ensembl chr2A:27,306,527...27,332,804 		JBrowse link
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:12678497 RGD:5133414 NCBI chr 1:46,642,602...46,673,568 JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 ISO RGD PMID:192455 RGD:5133256 NCBI chr2A:6,856,242...6,874,567 JBrowse link
G CTPS1 CTP synthase 1 ISO RGD PMID:12678497 RGD:5133414 NCBI chr 1:40,275,581...40,308,421
Ensembl chr 1:41,592,509...41,624,455 		JBrowse link
G CTPS2 CTP synthase 2 ISO RGD PMID:20739275 RGD:5133419 NCBI chr  X:9,209,727...9,332,641
Ensembl chr  X:16,579,409...16,693,184 		JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) ISO RGD PMID:15096496 RGD:5133412 NCBI chr16:52,977,879...52,994,496
Ensembl chr16:71,854,238...71,870,673 		JBrowse link
G NME1 NME/NM23 nucleoside diphosphate kinase 1 ISO RGD PMID:11768308 RGD:5134680 NCBI chr17:45,243,588...45,252,135
Ensembl chr17:50,113,622...50,131,636 		JBrowse link
G NME3 NME/NM23 nucleoside diphosphate kinase 3 ISO RGD PMID:11768308 RGD:5134680 NCBI chr16:392,694...394,106
Ensembl chr16:1,822,719...1,824,147 		JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 ISO RGD PMID:11768308 RGD:5134680 Ensembl chr16:389,068...393,976 JBrowse link
G NME6 NME/NM23 nucleoside diphosphate kinase 6 ISO RGD PMID:11768308 RGD:5134680 NCBI chr 3:48,206,365...48,217,618
Ensembl chr 3:49,290,069...49,299,831 		JBrowse link
G UMPS uridine monophosphate synthetase ISO RGD PMID:15096496 RGD:5133412 NCBI chr 3:121,832,758...121,851,707
Ensembl chr 3:128,731,355...128,745,029 		JBrowse link
dopamine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDC dopa decarboxylase ISO RGD PMID:19342614 RGD:4139904 NCBI chr 7:51,101,169...51,206,031
Ensembl chr 7:51,345,228...51,449,710 		JBrowse link
G QDPR quinoid dihydropteridine reductase ISO RGD PMID:19342614 RGD:4139904 NCBI chr 4:11,906,439...11,932,311
Ensembl chr 4:17,199,772...17,225,667 		JBrowse link
G SLC18A2 solute carrier family 18 member A2 ISO RGD PMID:19903816 RGD:5128868 NCBI chr10:113,823,005...113,862,451
Ensembl chr10:117,250,639...117,290,064 		JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:19342614 RGD:4139904 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433 		JBrowse link
electron transport chain pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5F1A ATP synthase F1 subunit alpha ISO SMPDB SMP:00355 NCBI chr18:39,366,384...39,380,514
Ensembl chr18:42,904,136...42,923,326 		JBrowse link
G ATP5F1B ATP synthase F1 subunit beta ISO SMPDB SMP:00355 NCBI chr12:32,264,570...32,272,419
Ensembl chr12:32,519,749...32,527,753 		JBrowse link
G ATP5F1C ATP synthase F1 subunit gamma ISO SMPDB SMP:00355 NCBI chr10:7,820,874...7,840,581
Ensembl chr10:7,801,438...7,821,088 		JBrowse link
G ATP5F1D ATP synthase F1 subunit delta ISO SMPDB SMP:00355
G ATP5F1E ATP synthase F1 subunit epsilon ISO SMPDB SMP:00355 NCBI chr20:55,379,615...55,383,316
Ensembl chr20:56,740,739...56,744,431 		JBrowse link
G ATP5MC2 ATP synthase membrane subunit c locus 2 ISO SMPDB SMP:00355 NCBI chr12:35,078,290...35,089,480 JBrowse link
G ATP5PB ATP synthase peripheral stalk-membrane subunit b ISO SMPDB SMP:00355 NCBI chr 1:114,110,749...114,122,715
Ensembl chr 1:126,224,725...126,235,897 		JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase ISO SMPDB SMP:00355 NCBI chr12:6,665,218...6,669,170
Ensembl chr12:6,583,895...6,587,729 		JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 ISO SMPDB SMP:00355 NCBI chr12:38,644,466...38,651,924
Ensembl chr12:39,541,550...39,549,040 		JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 ISO SMPDB SMP:00355 NCBI chr2B:43,694,744...43,845,764
Ensembl chr2B:160,938,514...161,117,320 		JBrowse link
G LOC100977575 cytochrome b-c1 complex subunit 1, mitochondrial ISO SMPDB SMP:00355 NCBI chr 3:48,520,870...48,531,947
Ensembl chr 3:49,602,770...49,613,717 		JBrowse link
G LOC100986481 cytochrome c ISO SMPDB SMP:00355 NCBI chr 7:25,784,900...25,791,598
Ensembl chr 7:25,396,013...25,398,549 		JBrowse link
G NDUFA1 NADH:ubiquinone oxidoreductase subunit A1 ISO SMPDB SMP:00355 NCBI chr  X:108,935,315...108,940,237
Ensembl chr  X:119,330,105...119,334,963 		JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B ISO SMPDB
RGD		 PMID:16143825 RGD:2306881 SMP:00355 NCBI chr 1:15,962,383...15,998,056
Ensembl chr 1:17,018,542...17,054,509 		JBrowse link
G SDHC succinate dehydrogenase complex subunit C ISO SMPDB
RGD		 PMID:16143825 RGD:2306881 SMP:00355 NCBI chr 1:136,724,663...136,773,038
Ensembl chr 1:140,635,685...140,682,736 		JBrowse link
G SDHD succinate dehydrogenase complex subunit D ISO RGD
SMPDB		 PMID:15572694 PMID:16143825 RGD:1580035 RGD:2306881 SMP:00355 NCBI chr11:106,973,256...106,982,237
Ensembl chr11:110,817,016...110,896,829 		JBrowse link
G SLC25A4 solute carrier family 25 member 4 ISO SMPDB SMP:00355 NCBI chr 4:177,310,982...177,315,016
Ensembl chr 4:189,531,914...189,534,549 		JBrowse link
G SLC37A4 solute carrier family 37 member 4 ISO SMPDB SMP:00355 NCBI chr11:113,862,537...113,869,447
Ensembl chr11:117,792,700...117,799,269 		JBrowse link
epinephrine biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DBH dopamine beta-hydroxylase ISO RGD PMID:19342614 RGD:4139904 NCBI chr 9:104,761,504...104,784,445
Ensembl chr 9:133,371,821...133,393,697 		JBrowse link
G DDC dopa decarboxylase ISO RGD PMID:19342614 RGD:4139904 NCBI chr 7:51,101,169...51,206,031
Ensembl chr 7:51,345,228...51,449,710 		JBrowse link
G PNMT phenylethanolamine N-methyltransferase ISO RGD PMID:7914070 PMID:19342614 RGD:4139902 RGD:4139904 NCBI chr17:17,618,399...17,620,691
Ensembl chr17:17,835,277...17,837,180 		JBrowse link
G QDPR quinoid dihydropteridine reductase ISO RGD PMID:19342614 RGD:4139904 NCBI chr 4:11,906,439...11,932,311
Ensembl chr 4:17,199,772...17,225,667 		JBrowse link
G SLC18A2 solute carrier family 18 member A2 ISO RGD PMID:19903816 RGD:5128868 NCBI chr10:113,823,005...113,862,451
Ensembl chr10:117,250,639...117,290,064 		JBrowse link
G TH tyrosine hydroxylase ISO RGD PMID:19342614 RGD:4139904 NCBI chr11:2,204,820...2,212,750
Ensembl chr11:2,231,248...2,242,433 		JBrowse link
estradiol biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP11A1 cytochrome P450 family 11 subfamily A member 1 ISO RGD PMID:17926129 RGD:4892309 NCBI chr15:53,280,110...53,310,868
Ensembl chr15:72,901,286...72,931,164 		JBrowse link
G CYP17A1 cytochrome P450 family 17 subfamily A member 1 ISO RGD PMID:17926129 RGD:4892309 NCBI chr10:99,431,762...99,439,619
Ensembl chr10:102,896,376...102,901,514 		JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO RGD PMID:18821018 RGD:2325883 NCBI chr15:30,152,924...30,282,854
Ensembl chr15:48,486,688...48,521,554 		JBrowse link
G FDX1 ferredoxin 1 ISO RGD PMID:18821018 RGD:2325883 NCBI chr11:105,311,613...105,345,414 JBrowse link
G FDXR ferredoxin reductase ISO RGD PMID:18821018 RGD:2325883 NCBI chr17:68,808,123...68,818,642
Ensembl chr17:74,364,343...74,374,852 		JBrowse link
G HSD17B1 hydroxysteroid 17-beta dehydrogenase 1 ISO RGD PMID:15583024 PMID:18821018 RGD:2325883 RGD:4889549 NCBI chr17:14,760,856...14,763,584
Ensembl chr17:14,986,814...14,988,820 		JBrowse link
G HSD17B2 hydroxysteroid 17-beta dehydrogenase 2 ISO RGD PMID:15583024 RGD:4889549 NCBI chr16:62,642,316...62,705,261
Ensembl chr16:82,062,042...82,125,139 		JBrowse link
G HSD17B3 hydroxysteroid 17-beta dehydrogenase 3 ISO RGD PMID:18821018 RGD:2325883 NCBI chr 9:67,327,047...67,411,754
Ensembl chr 9:95,451,031...95,522,739 		JBrowse link
G LOC100982464 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 ISO RGD PMID:15583024 RGD:4889549 NCBI chr 1:83,130,065...83,156,996
Ensembl chr 1:118,128,493...118,153,124 		JBrowse link
G LOC100990437 NADPH--cytochrome P450 reductase ISO RGD PMID:17926129 RGD:4892309 NCBI chr 7:68,035,021...68,105,934
Ensembl chr 7:82,364,418...82,437,530 		JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:18821018 RGD:2325883 NCBI chr 8:37,446,334...37,454,102
Ensembl chr 8:34,623,201...34,629,544 		JBrowse link
G STS steroid sulfatase ISO RGD PMID:21693170 RGD:6893583 Ensembl chr  X:7,047,017...7,207,540 JBrowse link
G SULT1E1 sulfotransferase family 1E member 1 ISO RGD PMID:21693170 RGD:6893583 NCBI chr 4:54,377,681...54,396,619
Ensembl chr 4:60,713,392...60,733,229 		JBrowse link
G SULT2A1 sulfotransferase family 2A member 1 ISO RGD PMID:18821018 RGD:2325883 NCBI chr19:44,864,747...44,880,688
Ensembl chr19:53,517,248...53,532,573 		JBrowse link
fatty acid beta degradation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 ISO SMPDB SMP:00052 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424 		JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 ISO SMPDB SMP:00052 NCBI chr12:49,082,122...49,158,524
Ensembl chr12:49,941,914...50,011,140 		JBrowse link
G ACAA2 acetyl-CoA acyltransferase 2 ISO SMPDB
RGD		 PMID:11879205 RGD:2317624 SMP:00480 SMP:00481 SMP:00482 NCBI chr18:43,164,504...43,195,038
Ensembl chr18:46,512,374...46,542,737 		JBrowse link
G ACAD9 acyl-CoA dehydrogenase family member 9 ISO RGD PMID:14728676 RGD:2317589 NCBI chr 3:125,941,278...125,974,847
Ensembl chr 3:133,298,753...133,331,883 		JBrowse link
G ACADL acyl-CoA dehydrogenase long chain ISO RGD
SMPDB		 PMID:3968063 PMID:14728676 RGD:2317589 RGD:2317678 SMP:00480 SMP:00482 NCBI chr2B:97,445,421...97,483,514
Ensembl chr2B:215,847,775...215,885,524 		JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain ISO RGD
SMPDB		 PMID:3968063 PMID:14728676 RGD:2317589 RGD:2317678 SMP:00481 NCBI chr 1:74,939,477...74,978,815
Ensembl chr 1:76,911,763...76,950,840 		JBrowse link
G ACADS acyl-CoA dehydrogenase short chain ISO SMPDB
RGD		 PMID:3968063 PMID:14728676 RGD:2317589 RGD:2317678 SMP:00480 NCBI chr12:118,309,303...118,323,489
Ensembl chr12:121,682,113...121,696,376 		JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain ISO RGD PMID:14728676 PMID:15850553 RGD:2317589 RGD:2317683 NCBI chr17:7,249,717...7,255,165
Ensembl chr17:7,234,283...7,242,417 		JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 ISO SMPDB SMP:00480 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787 		JBrowse link
G ACSL1 acyl-CoA synthetase long chain family member 1 ISO SMPDB
RGD		 PMID:17762044 RGD:2317576 SMP:00052 SMP:00482 NCBI chr 4:176,920,811...176,991,495
Ensembl chr 4:189,145,403...189,198,646 		JBrowse link
G ACSL3 acyl-CoA synthetase long chain family member 3 ISO RGD PMID:17762044 RGD:2317576 NCBI chr2B:110,100,210...110,181,277
Ensembl chr2B:228,706,142...228,759,882 		JBrowse link
G ACSL4 acyl-CoA synthetase long chain family member 4 ISO RGD PMID:17762044 RGD:2317576 NCBI chr  X:98,731,109...98,841,067
Ensembl chr  X:109,206,964...109,310,914 		JBrowse link
G ACSL5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:17762044 RGD:2317576 NCBI chr10:108,965,559...109,019,240
Ensembl chr10:112,407,161...112,457,892 		JBrowse link
G ACSL6 acyl-CoA synthetase long chain family member 6 ISO RGD PMID:17762044 RGD:2317576 NCBI chr 5:127,373,306...127,434,954
Ensembl chr 5:133,537,292...133,586,711 		JBrowse link
G ACSM3 acyl-CoA synthetase medium chain family member 3 ISO RGD PMID:17762044 RGD:2317576 NCBI chr16:17,611,715...17,644,587
Ensembl chr16:20,796,425...20,829,315 		JBrowse link
G ACSM4 acyl-CoA synthetase medium chain family member 4 ISO RGD PMID:17762044 RGD:2317576 NCBI chr12:7,448,372...7,474,634
Ensembl chr12:7,613,474...7,637,536 		JBrowse link
G ACSS1 acyl-CoA synthetase short chain family member 1 ISO RGD PMID:17762044 RGD:2317576 NCBI chr20:24,946,629...25,001,311
Ensembl chr20:25,293,511...25,349,017 		JBrowse link
G ACSS2 acyl-CoA synthetase short chain family member 2 ISO RGD PMID:17762044 RGD:2317576 NCBI chr20:31,205,104...31,256,263
Ensembl chr20:32,329,721...32,380,526 		JBrowse link
G ACSS3 acyl-CoA synthetase short chain family member 3 ISO SMPDB SMP:00480 NCBI chr12:78,586,987...78,771,478
Ensembl chr12:81,698,875...81,878,325 		JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO SMPDB
RGD		 PMID:19430727 RGD:2317584 SMP:00482 NCBI chr11:63,841,028...63,928,242
Ensembl chr11:67,144,736...67,205,481 		JBrowse link
G CPT1B carnitine palmitoyltransferase 1B ISO RGD PMID:19430727 RGD:2317584 NCBI chr22:30,815,073...30,825,341
Ensembl chr22:49,926,893...49,935,420 		JBrowse link
G CPT2 carnitine palmitoyltransferase 2 ISO SMPDB
RGD		 PMID:19430727 RGD:2317584 SMP:00052 SMP:00482 NCBI chr 1:52,469,416...52,487,166
Ensembl chr 1:54,069,334...54,086,994 		JBrowse link
G CRAT carnitine O-acetyltransferase ISO SMPDB SMP:00052 NCBI chr 9:100,220,019...100,236,061
Ensembl chr 9:128,880,057...128,896,484 		JBrowse link
G CROT carnitine O-octanoyltransferase ISO SMPDB SMP:00052 NCBI chr 7:79,339,498...79,393,676
Ensembl chr 7:92,989,868...93,043,832 		JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 ISO RGD
SMPDB		 PMID:12379132 RGD:2317616 SMP:00480 SMP:00481 SMP:00482 Ensembl chr10:134,278,388...134,289,308 JBrowse link
G ETFA electron transfer flavoprotein subunit alpha ISO RGD PMID:14728676 RGD:2317589 NCBI chr15:55,128,686...55,227,369
Ensembl chr15:74,720,198...74,818,494 		JBrowse link
G ETFB electron transfer flavoprotein subunit beta ISO RGD PMID:14728676 RGD:2317589 NCBI chr19:48,281,101...48,301,527
Ensembl chr19:57,166,829...57,175,582 		JBrowse link
G ETFDH electron transfer flavoprotein dehydrogenase ISO RGD PMID:14728676 RGD:2317589 NCBI chr 4:150,992,123...151,028,698
Ensembl chr 4:162,802,917...162,838,807 		JBrowse link
G HADH hydroxyacyl-CoA dehydrogenase ISO SMPDB
RGD		 PMID:17491019 RGD:2302227 SMP:00480 SMP:00481 SMP:00482 NCBI chr 4:100,495,205...100,540,589
Ensembl chr 4:111,067,336...111,113,868 		JBrowse link
G HADHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha ISO SMPDB
RGD		 PMID:10816122 RGD:2317625 SMP:00481 SMP:00482 NCBI chr2A:26,185,938...26,240,229
Ensembl chr2A:26,279,995...26,334,068 		JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta ISO SMPDB
RGD		 PMID:10816122 RGD:2317625 SMP:00481 SMP:00482 NCBI chr2A:26,240,365...26,285,982
Ensembl chr2A:26,334,043...26,379,059 		JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 ISO SMPDB SMP:00480 NCBI chr  X:45,645,849...45,649,039
Ensembl chr  X:53,754,164...53,757,643 		JBrowse link
G LOC100972336 acyl-CoA synthetase medium chain family member 1 ISO SMPDB SMP:00481 NCBI chr16:17,676,986...17,735,611 JBrowse link
G PEX11G peroxisomal biogenesis factor 11 gamma ISO SMPDB SMP:00052 NCBI chr19:6,763,676...6,782,075
Ensembl chr19:7,626,021...7,639,174 		JBrowse link
G PEX13 peroxisomal biogenesis factor 13 ISO SMPDB SMP:00052 NCBI chr2A:61,108,970...61,143,615
Ensembl chr2A:62,250,887...62,285,151 		JBrowse link
G PEX14 peroxisomal biogenesis factor 14 ISO SMPDB SMP:00052 NCBI chr 1:9,234,928...9,391,086
Ensembl chr 1:10,459,884...10,614,187 		JBrowse link
G SLC25A20 solute carrier family 25 member 20 ISO SMPDB
RGD		 PMID:19430727 RGD:2317584 SMP:00052 SMP:00481 SMP:00482 NCBI chr 3:48,782,960...48,824,616
Ensembl chr 3:49,863,259...49,901,839 		JBrowse link
fatty acid biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACACA acetyl-CoA carboxylase alpha ISO RGD
SMPDB		 PMID:11735100 PMID:17882277 RGD:2317309 RGD:2317316 SMP:00456 NCBI chr17:19,670,114...19,998,903
Ensembl chr17:19,969,205...20,297,651 		JBrowse link
G ACLY ATP citrate lyase ISO RGD PMID:11735100 PMID:17882277 RGD:2317309 RGD:2317316 NCBI chr17:15,385,335...15,447,269
Ensembl chr17:15,615,994...15,664,800 		JBrowse link
G FASN fatty acid synthase ISO SMPDB
RGD		 PMID:15715522 PMID:17882277 PMID:19181734 RGD:2317204 RGD:2317309 RGD:2317317 SMP:00456 NCBI chr17:76,483,108...76,503,148
Ensembl chr17:82,187,516...82,205,647 		JBrowse link
fatty acid elongation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAA2 acetyl-CoA acyltransferase 2 ISO SMPDB SMP:00054 NCBI chr18:43,164,504...43,195,038
Ensembl chr18:46,512,374...46,542,737 		JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 ISO SMPDB SMP:00054 Ensembl chr10:134,278,388...134,289,308 JBrowse link
G HADHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha ISO SMPDB SMP:00054 NCBI chr2A:26,185,938...26,240,229
Ensembl chr2A:26,279,995...26,334,068 		JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta ISO SMPDB SMP:00054 NCBI chr2A:26,240,365...26,285,982
Ensembl chr2A:26,334,043...26,379,059 		JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 ISO SMPDB SMP:00054 NCBI chr  X:45,645,849...45,649,039
Ensembl chr  X:53,754,164...53,757,643 		JBrowse link
G MECR mitochondrial trans-2-enoyl-CoA reductase ISO SMPDB SMP:00054 NCBI chr 1:28,463,466...28,501,518
Ensembl chr 1:29,490,318...29,527,704 		JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 ISO SMPDB SMP:00054 NCBI chr 1:39,358,424...39,383,087
Ensembl chr 1:40,683,841...40,708,609 		JBrowse link
fatty acid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAA2 acetyl-CoA acyltransferase 2 ISO SMPDB SMP:00051 NCBI chr18:43,164,504...43,195,038
Ensembl chr18:46,512,374...46,542,737 		JBrowse link
G ACADL acyl-CoA dehydrogenase long chain ISO SMPDB SMP:00051 NCBI chr2B:97,445,421...97,483,514
Ensembl chr2B:215,847,775...215,885,524 		JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain ISO SMPDB SMP:00051 NCBI chr 1:74,939,477...74,978,815
Ensembl chr 1:76,911,763...76,950,840 		JBrowse link
G ACADS acyl-CoA dehydrogenase short chain ISO SMPDB SMP:00051 NCBI chr12:118,309,303...118,323,489
Ensembl chr12:121,682,113...121,696,376 		JBrowse link
G ACADSB acyl-CoA dehydrogenase short/branched chain ISO SMPDB SMP:00051 NCBI chr10:119,565,913...119,612,092
Ensembl chr10:123,839,570...123,886,759 		JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain ISO SMPDB SMP:00051 NCBI chr17:7,249,717...7,255,165
Ensembl chr17:7,234,283...7,242,417 		JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 ISO SMPDB SMP:00051 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787 		JBrowse link
G ACSL1 acyl-CoA synthetase long chain family member 1 ISO SMPDB SMP:00051 NCBI chr 4:176,920,811...176,991,495
Ensembl chr 4:189,145,403...189,198,646 		JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO SMPDB SMP:00051 NCBI chr11:63,841,028...63,928,242
Ensembl chr11:67,144,736...67,205,481 		JBrowse link
G CPT2 carnitine palmitoyltransferase 2 ISO SMPDB SMP:00051 NCBI chr 1:52,469,416...52,487,166
Ensembl chr 1:54,069,334...54,086,994 		JBrowse link
G ECHS1 enoyl-CoA hydratase, short chain 1 ISO SMPDB SMP:00051 Ensembl chr10:134,278,388...134,289,308 JBrowse link
G GCDH glutaryl-CoA dehydrogenase ISO SMPDB SMP:00051 NCBI chr19:12,452,779...12,461,757
Ensembl chr19:13,195,241...13,204,223 		JBrowse link
G HADHA hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha ISO SMPDB
RGD		 PMID:1730633 RGD:1600572 SMP:00051 NCBI chr2A:26,185,938...26,240,229
Ensembl chr2A:26,279,995...26,334,068 		JBrowse link
G HADHB hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta ISO RGD
SMPDB		 PMID:1730633 RGD:1600572 SMP:00051 NCBI chr2A:26,240,365...26,285,982
Ensembl chr2A:26,334,043...26,379,059 		JBrowse link
G SCD stearoyl-CoA desaturase ISO RGD PMID:12896875 RGD:1304415 NCBI chr10:96,948,212...96,965,633
Ensembl chr10:100,429,615...100,442,776 		JBrowse link
folate cycle metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:22353665 RGD:7242562 NCBI chr 3:123,166,630...123,244,257
Ensembl chr 3:130,484,862...130,562,934 		JBrowse link
G AMT aminomethyltransferase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 3:49,344,590...49,350,383
Ensembl chr 3:50,589,193...50,594,968 		JBrowse link
G DHFR dihydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 5:34,663,210...34,689,467
Ensembl chr 5:34,938,548...34,967,003 		JBrowse link
G DLD dihydrolipoamide dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 7:99,872,020...99,901,884
Ensembl chr 7:112,593,934...112,623,629 		JBrowse link
G DMGDH dimethylglycine dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 5:36,241,341...36,313,995
Ensembl chr 5:36,732,005...36,805,883 		JBrowse link
G FOLR2 folate receptor beta ISO RGD PMID:22108709 RGD:7242557 NCBI chr11:67,295,305...67,300,463
Ensembl chr11:70,518,931...70,524,088 		JBrowse link
G FPGS folylpolyglutamate synthase ISO RGD PMID:16859665 RGD:7242559 NCBI chr 9:98,921,986...98,933,542
Ensembl chr 9:127,593,592...127,604,200 		JBrowse link
G GCSH glycine cleavage system protein H ISO RGD PMID:20645850 RGD:7242560 NCBI chr16:61,688,959...61,702,364 JBrowse link
G GGH gamma-glutamyl hydrolase ISO RGD PMID:16859665 RGD:7242559 NCBI chr 8:59,547,821...59,571,523
Ensembl chr 8:61,222,194...61,246,252 		JBrowse link
G GLDC glycine decarboxylase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 9:6,347,381...6,456,042
Ensembl chr 9:6,527,242...6,635,779 		JBrowse link
G LOC100994139 folate receptor alpha ISO RGD PMID:22108709 RGD:7242557 NCBI chr11:67,268,721...67,275,498
Ensembl chr11:70,492,039...70,498,665 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like ISO RGD PMID:22108709 RGD:7242557 NCBI chr 6:148,679,587...148,919,002
Ensembl chr 6:153,390,498...153,619,884 		JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO RGD PMID:20645850 PMID:22108709 RGD:7242557 RGD:7242560 NCBI chr2A:74,270,161...74,285,790
Ensembl chr2A:75,777,028...75,792,699 		JBrowse link
G MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like ISO RGD PMID:22108709 RGD:7242557 NCBI chr 4:49,889,607...50,034,860
Ensembl chr 4:55,722,237...55,867,117 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 1:10,548,196...10,568,174
Ensembl chr 1:11,766,334...11,785,419 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 1:212,353,195...212,463,304
Ensembl chr 1:217,358,050...217,460,946 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:22108709 RGD:7242557 NCBI chr 5:8,195,868...8,228,071
Ensembl chr 5:8,017,403...8,049,322 		JBrowse link
G SARDH sarcosine dehydrogenase ISO RGD PMID:20645850 RGD:7242560 NCBI chr 9:104,786,774...104,864,480
Ensembl chr 9:133,398,806...133,473,642 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 ISO RGD PMID:22108709 RGD:7242557 NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:20645850 PMID:22108709 RGD:7242557 RGD:7242560 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138 		JBrowse link
G SLC19A1 solute carrier family 19 member 1 ISO RGD PMID:20814827 PMID:22108709 RGD:7242426 RGD:7242557 NCBI chr21:31,836,774...31,883,829
Ensembl chr21:45,090,595...45,134,752 		JBrowse link
G SLC25A32 solute carrier family 25 member 32 ISO RGD PMID:22332074 RGD:7242561 NCBI chr 8:100,054,560...100,071,016
Ensembl chr 8:102,210,068...102,226,732 		JBrowse link
G SLC46A1 solute carrier family 46 member 1 ISO RGD PMID:20814827 PMID:22108709 RGD:7242426 RGD:7242557 NCBI chr17:28,367,674...28,379,618
Ensembl chr17:28,870,678...28,877,632 		JBrowse link
folate mediated one-carbon metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:14729668 RGD:1547843 NCBI chr 3:123,166,630...123,244,257
Ensembl chr 3:130,484,862...130,562,934 		JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:9332377 PMID:22332074 RGD:70804 RGD:7242561 NCBI chr2B:102,574,700...102,612,492
Ensembl chr2B:221,159,439...221,197,360 		JBrowse link
G DHFR dihydrofolate reductase ISO RGD PMID:11502523 PMID:22332074 RGD:1298877 RGD:7242561 NCBI chr 5:34,663,210...34,689,467
Ensembl chr 5:34,938,548...34,967,003 		JBrowse link
G DMGDH dimethylglycine dehydrogenase ISO RGD PMID:15358367 RGD:1547831 NCBI chr 5:36,241,341...36,313,995
Ensembl chr 5:36,732,005...36,805,883 		JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:12450384 PMID:22332074 RGD:1547842 RGD:7242561 NCBI chr21:19,871,656...19,909,893
Ensembl chr21:33,244,457...33,282,331 		JBrowse link
G GNMT glycine N-methyltransferase ISO RGD PMID:8278367 RGD:1545057 NCBI chr 6:42,550,631...42,554,385
Ensembl chr 6:43,846,560...43,849,679 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO RGD PMID:2186031 PMID:22332074 RGD:1299513 RGD:7242561 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881 		JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO RGD PMID:9454603 RGD:1540378 NCBI chr2A:74,270,161...74,285,790
Ensembl chr2A:75,777,028...75,792,699 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO RGD PMID:11933257 PMID:22332074 RGD:1535021 RGD:7242561 NCBI chr 1:10,548,196...10,568,174
Ensembl chr 1:11,766,334...11,785,419 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:15845641 PMID:20814827 RGD:1359026 RGD:7242426 NCBI chr 1:212,353,195...212,463,304
Ensembl chr 1:217,358,050...217,460,946 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:20814827 RGD:7242426 NCBI chr 5:8,195,868...8,228,071
Ensembl chr 5:8,017,403...8,049,322 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 ISO RGD PMID:3110140 PMID:15671219 PMID:22332074 RGD:1359815 RGD:2300383 RGD:7242561 NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:3110140 PMID:15671219 PMID:22332074 RGD:1359815 RGD:2300383 RGD:7242561 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138 		JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:9894005 PMID:22332074 RGD:1545055 RGD:7242561 NCBI chr18:13,653,085...13,668,478
Ensembl chr18:17,295,182...17,310,320 		JBrowse link
folate metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO SMPDB
RGD		 PMID:14729668 RGD:1547843 SMP:00053 NCBI chr 3:123,166,630...123,244,257
Ensembl chr 3:130,484,862...130,562,934 		JBrowse link
G DHFR dihydrofolate reductase ISO SMPDB
RGD		 PMID:11502523 RGD:1298877 SMP:00053 NCBI chr 5:34,663,210...34,689,467
Ensembl chr 5:34,938,548...34,967,003 		JBrowse link
G DMGDH dimethylglycine dehydrogenase ISO RGD PMID:15358367 RGD:1547831 NCBI chr 5:36,241,341...36,313,995
Ensembl chr 5:36,732,005...36,805,883 		JBrowse link
G FOLR2 folate receptor beta ISO RGD PMID:8445646 RGD:1540379 NCBI chr11:67,295,305...67,300,463
Ensembl chr11:70,518,931...70,524,088 		JBrowse link
G FPGS folylpolyglutamate synthase ISO SMPDB SMP:00053 NCBI chr 9:98,921,986...98,933,542
Ensembl chr 9:127,593,592...127,604,200 		JBrowse link
G FTCD formimidoyltransferase cyclodeaminase ISO SMPDB SMP:00053 NCBI chr21:32,481,042...32,501,932
Ensembl chr21:45,734,825...45,753,400 		JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ISO RGD PMID:12450384 RGD:1547842 NCBI chr21:19,871,656...19,909,893
Ensembl chr21:33,244,457...33,282,331 		JBrowse link
G GGH gamma-glutamyl hydrolase ISO SMPDB SMP:00053 NCBI chr 8:59,547,821...59,571,523
Ensembl chr 8:61,222,194...61,246,252 		JBrowse link
G GNMT glycine N-methyltransferase ISO RGD PMID:15347642 RGD:1359070 NCBI chr 6:42,550,631...42,554,385
Ensembl chr 6:43,846,560...43,849,679 		JBrowse link
G MTFMT mitochondrial methionyl-tRNA formyltransferase ISO SMPDB SMP:00053 NCBI chr15:43,942,227...43,969,182
Ensembl chr15:62,225,620...62,253,612 		JBrowse link
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ISO SMPDB
RGD		 PMID:2186031 RGD:1299513 SMP:00053 NCBI chr14:44,969,573...45,041,296
Ensembl chr14:63,223,484...63,293,881 		JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like ISO SMPDB SMP:00053 NCBI chr 6:148,679,587...148,919,002
Ensembl chr 6:153,390,498...153,619,884 		JBrowse link
G MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ISO SMPDB
RGD		 PMID:9454603 RGD:1540378 SMP:00053 NCBI chr2A:74,270,161...74,285,790
Ensembl chr2A:75,777,028...75,792,699 		JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO SMPDB
RGD		 PMID:11933257 RGD:1535021 SMP:00053 NCBI chr 1:10,548,196...10,568,174
Ensembl chr 1:11,766,334...11,785,419 		JBrowse link
G MTHFS methenyltetrahydrofolate synthetase ISO SMPDB SMP:00053 NCBI chr15:58,810,966...58,864,831
Ensembl chr15:77,770,216...77,822,206 		JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:15845641 RGD:1359026 NCBI chr 1:212,353,195...212,463,304
Ensembl chr 1:217,358,050...217,460,946 		JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ISO RGD PMID:15979034 RGD:1359037 NCBI chr 5:8,195,868...8,228,071
Ensembl chr 5:8,017,403...8,049,322 		JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 ISO RGD PMID:15671219 RGD:1359815 NCBI chr17:32,870,949...32,905,690
Ensembl chr17:37,849,206...37,884,220 		JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO RGD PMID:15671219 RGD:1359815 NCBI chr12:31,692,451...31,697,727
Ensembl chr12:31,944,785...31,950,138 		JBrowse link
G SLC19A1 solute carrier family 19 member 1 ISO RGD PMID:11600421 RGD:735239 NCBI chr21:31,836,774...31,883,829
Ensembl chr21:45,090,595...45,134,752 		JBrowse link
G SLC46A1 solute carrier family 46 member 1 ISO SMPDB SMP:00053 NCBI chr17:28,367,674...28,379,618
Ensembl chr17:28,870,678...28,877,632 		JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:9894005 RGD:1545055 NCBI chr18:13,653,085...13,668,478
Ensembl chr18:17,295,182...17,310,320 		JBrowse link
fructose and mannose metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1B1 aldo-keto reductase family 1 member B ISO SMPDB SMP:00064 NCBI chr 7:126,400,861...126,417,756
Ensembl chr 7:138,912,953...138,924,095 		JBrowse link
G ALDOB aldolase, fructose-bisphosphate B ISO SMPDB SMP:00064 NCBI chr 9:72,630,064...72,650,918
Ensembl chr 9:100,624,151...100,638,597 		JBrowse link
G FBP1 fructose-bisphosphatase 1 ISO SMPDB SMP:00064 NCBI chr 9:65,695,082...65,731,628
Ensembl chr 9:93,825,150...93,860,968 		JBrowse link
G FCSK fucose kinase ISO SMPDB SMP:00064 NCBI chr16:54,534,064...54,559,894
Ensembl chr16:70,294,061...70,318,493 		JBrowse link
G GFUS GDP-L-fucose synthase ISO SMPDB SMP:00064 NCBI chr 8:140,366,003...140,371,018
Ensembl chr 8:143,381,054...143,386,008 		JBrowse link
G GMDS GDP-mannose 4,6-dehydratase ISO SMPDB SMP:00064 NCBI chr 6:1,443,129...2,071,856
Ensembl chr 6:1,556,227...2,178,330 		JBrowse link
G GMPPB GDP-mannose pyrophosphorylase B ISO SMPDB SMP:00064 NCBI chr 3:49,653,638...49,656,135
Ensembl chr 3:50,889,479...50,891,969 		JBrowse link
G HK1 hexokinase 1 ISO SMPDB SMP:00064 NCBI chr10:65,786,940...65,870,204
Ensembl chr10:68,289,288...68,401,045 		JBrowse link
G KHK ketohexokinase ISO SMPDB SMP:00064 NCBI chr2A:27,085,758...27,099,768
Ensembl chr2A:27,174,896...27,189,308 		JBrowse link
G LOC100978081 sorbitol dehydrogenase ISO SMPDB SMP:00064 NCBI chr15:23,971,017...24,025,043 JBrowse link
G LOC100995352 keratin-associated protein 10-2 ISO SMPDB SMP:00064
G MPI mannose phosphate isomerase ISO SMPDB SMP:00064 NCBI chr15:53,832,088...53,841,832
Ensembl chr15:73,449,439...73,457,205 		JBrowse link
G PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 ISO SMPDB SMP:00064 NCBI chr  X:47,143,081...47,209,034
Ensembl chr  X:55,374,807...55,441,024 		JBrowse link
G PFKL phosphofructokinase, liver type ISO SMPDB SMP:00064 NCBI chr21:30,557,576...30,584,231
Ensembl chr21:43,857,052...43,878,380 		JBrowse link
G PHPT1 phosphohistidine phosphatase 1 ISO SMPDB SMP:00064 NCBI chr 9:107,906,160...107,908,130 JBrowse link
G PMM1 phosphomannomutase 1 ISO SMPDB SMP:00064 NCBI chr22:22,472,067...22,485,029
Ensembl chr22:40,558,733...40,571,811 		JBrowse link
G TPI1 triosephosphate isomerase 1 ISO SMPDB SMP:00064 NCBI chr12:6,999,275...7,002,678
Ensembl chr12:6,910,813...6,913,612 		JBrowse link
galactose metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1B1 aldo-keto reductase family 1 member B ISO SMPDB SMP:00043 NCBI chr 7:126,400,861...126,417,756
Ensembl chr 7:138,912,953...138,924,095 		JBrowse link
G B4GALT1 beta-1,4-galactosyltransferase 1 ISO SMPDB SMP:00043 NCBI chr 9:32,889,124...32,945,759
Ensembl chr 9:33,691,733...33,754,192 		JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 ISO SMPDB SMP:00043 NCBI chr17:14,407,355...14,419,660
Ensembl chr17:14,635,667...14,646,674 		JBrowse link
G GAA alpha glucosidase ISO SMPDB SMP:00043 NCBI chr17:74,188,296...74,206,593
Ensembl chr17:79,723,699...79,741,839 		JBrowse link
G GALE UDP-galactose-4-epimerase ISO SMPDB SMP:00043 NCBI chr 1:22,987,218...22,992,416
Ensembl chr 1:23,971,454...23,976,500 		JBrowse link
G GALK1 galactokinase 1 ISO SMPDB SMP:00043 NCBI chr17:69,708,641...69,715,942
Ensembl chr17:75,259,522...75,269,048 		JBrowse link
G GALT galactose-1-phosphate uridylyltransferase ISO SMPDB SMP:00043 NCBI chr 9:34,487,313...34,498,477 JBrowse link
G GCK glucokinase ISO SMPDB SMP:00043 NCBI chr 7:44,857,604...44,903,683
Ensembl chr 7:44,926,848...44,937,751 		JBrowse link
G GLA galactosidase alpha ISO SMPDB SMP:00043 NCBI chr  X:90,600,412...90,610,594
Ensembl chr  X:100,732,311...100,742,280 		JBrowse link
G GLB1 galactosidase beta 1 ISO SMPDB SMP:00043 NCBI chr 3:32,892,039...33,031,959
Ensembl chr 3:33,231,209...33,336,804 		JBrowse link
G HK1 hexokinase 1 ISO SMPDB SMP:00043 NCBI chr10:65,786,940...65,870,204
Ensembl chr10:68,289,288...68,401,045 		JBrowse link
G LCT lactase ISO SMPDB SMP:00043 NCBI chr2B:24,025,383...24,079,779
Ensembl chr2B:139,855,605...139,908,764 		JBrowse link
G PGM1 phosphoglucomutase 1 ISO SMPDB SMP:00043 NCBI chr 1:62,849,451...62,916,359
Ensembl chr 1:64,658,599...64,725,496 		JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 ISO SMPDB SMP:00043 NCBI chr2A:63,906,778...63,959,346
Ensembl chr2A:65,043,871...65,084,175 		JBrowse link
gluconeogenesis pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOB aldolase, fructose-bisphosphate B ISO RGD PMID:5251864 RGD:2302796 NCBI chr 9:72,630,064...72,650,918
Ensembl chr 9:100,624,151...100,638,597 		JBrowse link
G BPGM bisphosphoglycerate mutase ISO SMPDB SMP:00128 NCBI chr 7:126,605,151...126,637,934
Ensembl chr 7:139,123,318...139,144,487 		JBrowse link
G ENO1 enolase 1 ISO RGD
SMPDB		 PMID:2966075 RGD:2302802 SMP:00128 NCBI chr 1:7,619,490...7,637,558
Ensembl chr 1:8,855,074...8,873,215 		JBrowse link
G ENO2 enolase 2 ISO RGD PMID:15720133 RGD:2302795 NCBI chr12:7,043,807...7,053,178
Ensembl chr12:6,958,960...6,968,342 		JBrowse link
G FBP1 fructose-bisphosphatase 1 ISO SMPDB
RGD		 PMID:4353083 PMID:11440903 RGD:2302851 RGD:2302970 SMP:00128 NCBI chr 9:65,695,082...65,731,628
Ensembl chr 9:93,825,150...93,860,968 		JBrowse link
G FBP2 fructose-bisphosphatase 2 ISO RGD PMID:4353083 PMID:11440903 RGD:2302851 RGD:2302970 NCBI chr 9:65,650,460...65,685,794
Ensembl chr 9:93,780,956...93,815,872 		JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 ISO RGD
SMPDB		 PMID:4303362 PMID:4353083 PMID:11440903 RGD:2302850 RGD:2302851 RGD:2302970 SMP:00128 NCBI chr17:14,407,355...14,419,660
Ensembl chr17:14,635,667...14,646,674 		JBrowse link
G G6PC3 glucose-6-phosphatase catalytic subunit 3 ISO RGD PMID:4303362 PMID:4353083 PMID:11440903 RGD:2302850 RGD:2302851 RGD:2302970 NCBI chr17:13,320,104...13,326,112
Ensembl chr17:13,481,473...13,492,789 		JBrowse link
G GALM galactose mutarotase ISO SMPDB SMP:00128 NCBI chr2A:38,697,338...38,770,470
Ensembl chr2A:39,456,786...39,527,116 		JBrowse link
G GAPDH glyceraldehyde-3-phosphate dehydrogenase ISO SMPDB
RGD		 PMID:15720133 RGD:2302795 SMP:00128 NCBI chr12:6,665,218...6,669,170
Ensembl chr12:6,583,895...6,587,729 		JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:2966075 RGD:2302802 NCBI chr10:96,012,345...96,046,266
Ensembl chr10:99,506,205...99,540,178 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 ISO RGD PMID:2966075 RGD:2302802 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378 		JBrowse link
G GPI glucose-6-phosphate isomerase ISO SMPDB SMP:00128 NCBI chr19:31,301,469...31,355,362
Ensembl chr19:40,024,584...40,080,598 		JBrowse link
G HK2 hexokinase 2 ISO SMPDB SMP:00128 NCBI chr2A:74,897,914...74,957,234
Ensembl chr2A:76,400,240...76,460,874 		JBrowse link
G LDHAL6A lactate dehydrogenase A like 6A ISO SMPDB SMP:00128 NCBI chr11:18,493,842...18,517,691
Ensembl chr11:18,176,824...18,200,673 		JBrowse link
G LOC100995352 keratin-associated protein 10-2 ISO SMPDB
RGD		 PMID:5251864 RGD:2302796 SMP:00128
G MDH2 malate dehydrogenase 2 ISO SMPDB SMP:00128 NCBI chr 7:67,953,759...67,973,270
Ensembl chr 7:82,497,800...82,516,526 		JBrowse link
G MPC1 mitochondrial pyruvate carrier 1 ISO SMPDB SMP:00128 NCBI chr 6:164,331,604...164,349,747 JBrowse link
G PANK1 pantothenate kinase 1 ISO SMPDB SMP:00128 NCBI chr10:86,302,702...86,428,635
Ensembl chr10:89,847,888...89,912,765 		JBrowse link
G PC pyruvate carboxylase ISO SMPDB
RGD		 PMID:4353083 PMID:5773282 PMID:6049928 PMID:18613815 RGD:2302809 RGD:2302851 RGD:2302971 RGD:2302972 SMP:00128 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396 		JBrowse link
G PCK1 phosphoenolpyruvate carboxykinase 1 ISO SMPDB
RGD		 PMID:2966075 PMID:4303362 PMID:4353083 PMID:6049928 PMID:11440903 More... RGD:2302802 RGD:2302809 RGD:2302850 RGD:2302851 RGD:2302970 RGD:2302971 SMP:00128 NCBI chr20:53,901,738...53,907,090
Ensembl chr20:55,179,429...55,184,920 		JBrowse link
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial ISO RGD PMID:2966075 PMID:4353083 PMID:6049928 PMID:11440903 PMID:18613815 RGD:2302802 RGD:2302809 RGD:2302851 RGD:2302970 RGD:2302971 NCBI chr14:4,872,276...4,882,118
Ensembl chr14:22,996,813...23,006,775 		JBrowse link
G PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 ISO RGD PMID:15170386 RGD:2302793 NCBI chr  X:47,143,081...47,209,034
Ensembl chr  X:55,374,807...55,441,024 		JBrowse link
G PGAM1 phosphoglycerate mutase 1 ISO SMPDB SMP:00128 NCBI chr10:94,048,829...94,056,082
Ensembl chr10:97,542,558...97,549,867 		JBrowse link
G PGAM2 phosphoglycerate mutase 2 ISO SMPDB
RGD		 PMID:15720133 PMID:18092946 RGD:2302794 RGD:2302795 SMP:00128 NCBI chr 7:44,776,722...44,780,248
Ensembl chr 7:44,843,067...44,845,984 		JBrowse link
G PGK1 phosphoglycerate kinase 1 ISO RGD PMID:3091090 PMID:15720133 RGD:2302795 RGD:2302860 NCBI chr  X:67,280,269...67,302,307
Ensembl chr  X:77,391,805...77,414,459 		JBrowse link
G PGM1 phosphoglucomutase 1 ISO SMPDB SMP:00128 NCBI chr 1:62,849,451...62,916,359
Ensembl chr 1:64,658,599...64,725,496 		JBrowse link
G SLC25A11 solute carrier family 25 member 11 ISO SMPDB SMP:00128 NCBI chr17:4,985,477...4,988,348
Ensembl chr17:4,973,000...4,975,878 		JBrowse link
G SLC2A2 solute carrier family 2 member 2 ISO SMPDB SMP:00128 NCBI chr 3:168,002,609...168,033,237
Ensembl chr 3:176,188,184...176,218,722 		JBrowse link
G SLC37A4 solute carrier family 37 member 4 ISO SMPDB SMP:00128 NCBI chr11:113,862,537...113,869,447
Ensembl chr11:117,792,700...117,799,269 		JBrowse link
G TPI1 triosephosphate isomerase 1 ISO SMPDB SMP:00128 NCBI chr12:6,999,275...7,002,678
Ensembl chr12:6,910,813...6,913,612 		JBrowse link
glutamic acid/glutamate metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO SMPDB SMP:00072 NCBI chr16:7,609,282...7,718,049
Ensembl chr16:8,888,178...8,958,420 		JBrowse link
G ALDH4A1 aldehyde dehydrogenase 4 family member A1 ISO SMPDB SMP:00072 NCBI chr 1:17,829,723...17,861,008
Ensembl chr 1:18,878,421...18,909,615 		JBrowse link
G ALDH5A1 aldehyde dehydrogenase 5 family member A1 ISO SMPDB SMP:00072 NCBI chr 6:24,332,093...24,370,764
Ensembl chr 6:24,665,026...24,705,151 		JBrowse link
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO SMPDB SMP:00072 NCBI chr2A:27,218,699...27,245,156
Ensembl chr2A:27,306,527...27,332,804 		JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 ISO SMPDB SMP:00072 NCBI chr2B:97,735,486...97,936,623
Ensembl chr2B:216,136,857...216,337,728 		JBrowse link
G EARS2 glutamyl-tRNA synthetase 2, mitochondrial ISO SMPDB SMP:00072 NCBI chr16:14,552,664...14,588,022
Ensembl chr16:23,774,123...23,809,873 		JBrowse link
G GAD1 glutamate decarboxylase 1 ISO SMPDB SMP:00072 NCBI chr2B:58,100,623...58,145,045
Ensembl chr2B:175,558,538...175,602,944 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit ISO SMPDB SMP:00072 NCBI chr 6:53,052,145...53,102,794
Ensembl chr 6:54,687,315...54,734,994 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit ISO SMPDB SMP:00072 NCBI chr 1:96,548,850...96,573,273
Ensembl chr 1:95,278,665...95,297,893 		JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO SMPDB SMP:00072 NCBI chr2A:69,363,229...69,430,182
Ensembl chr2A:70,488,763...70,551,141 		JBrowse link
G GLS2 glutaminase 2 ISO SMPDB SMP:00072 NCBI chr12:32,426,264...32,443,690
Ensembl chr12:32,678,814...32,696,694 		JBrowse link
G GLUD1 glutamate dehydrogenase 1 ISO SMPDB SMP:00072 NCBI chr10:83,498,338...83,540,730 JBrowse link
G GLUL glutamate-ammonia ligase ISO SMPDB
RGD		 PMID:28323 PMID:4403443 RGD:2301547 RGD:2301548 SMP:00072 NCBI chr 1:157,882,258...157,891,562
Ensembl chr 1:161,534,106...161,543,411 		JBrowse link
G GMPS guanine monophosphate synthase ISO SMPDB SMP:00072 NCBI chr 3:152,925,905...152,999,180
Ensembl chr 3:160,977,222...161,045,214 		JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO SMPDB SMP:00072 NCBI chr14:33,371,603...33,388,098
Ensembl chr14:51,655,182...51,671,619 		JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 ISO SMPDB SMP:00072 NCBI chr16:38,995,770...39,022,750
Ensembl chr16:58,120,781...58,147,378 		JBrowse link
G GPT glutamic--pyruvic transaminase ISO SMPDB SMP:00072 Ensembl chr 8:144,259,991...144,263,737 JBrowse link
G GSR glutathione-disulfide reductase ISO SMPDB SMP:00072 NCBI chr 8:29,990,543...30,040,157
Ensembl chr 8:27,180,300...27,229,557 		JBrowse link
G GSS glutathione synthetase ISO SMPDB SMP:00072 NCBI chr20:31,256,734...31,284,356
Ensembl chr20:32,381,745...32,409,297 		JBrowse link
G NADSYN1 NAD synthetase 1 ISO SMPDB SMP:00072 NCBI chr11:66,464,320...66,537,649
Ensembl chr11:69,735,871...69,788,953 		JBrowse link
G NAGK N-acetylglucosamine kinase ISO SMPDB SMP:00072 NCBI chr2A:71,114,832...71,125,182
Ensembl chr2A:72,616,077...72,626,435 		JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase ISO SMPDB SMP:00072 NCBI chr 4:67,491,407...67,533,822
Ensembl chr 4:74,059,966...74,102,002 		JBrowse link
G QARS1 glutaminyl-tRNA synthetase 1 ISO SMPDB SMP:00072 NCBI chr 3:49,020,310...49,029,443
Ensembl chr 3:50,100,216...50,125,112 		JBrowse link
glutathione conjugation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSTA4 glutathione S-transferase alpha 4 ISO RGD PMID:10720752 PMID:11018474 RGD:1358120 RGD:1641942 NCBI chr 6:52,532,942...52,550,404
Ensembl chr 6:54,171,318...54,188,976 		JBrowse link
G GSTM1 glutathione S-transferase mu 1 ISO RGD PMID:10720752 RGD:1358120 Ensembl chr 1:127,979,238...128,010,411 JBrowse link
G GSTM2 glutathione S-transferase mu 2 ISO RGD PMID:10720752 PMID:12624007 RGD:1358120 RGD:631154 NCBI chr 1:112,043,201...112,050,810 JBrowse link
G GSTO2 glutathione S-transferase omega 2 ISO RGD PMID:10720752 RGD:1358120 NCBI chr10:100,868,109...100,901,013
Ensembl chr10:104,326,175...104,357,604 		JBrowse link
G GSTP1 glutathione S-transferase pi 1 ISO RGD PMID:11018474 PMID:15110098 RGD:1357965 RGD:1641942 NCBI chr11:62,942,756...62,945,701
Ensembl chr11:66,253,421...66,256,472 		JBrowse link
glutathione metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANPEP alanyl aminopeptidase, membrane ISO SMPDB SMP:00015 NCBI chr15:68,479,349...68,509,238
Ensembl chr15:87,681,826...87,703,713 		JBrowse link
G CASP7 caspase 7 ISO SMPDB SMP:00015 NCBI chr10:110,273,318...110,324,800
Ensembl chr10:113,707,780...113,758,626 		JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit ISO SMPDB
RGD		 PMID:16137247 PMID:16183645 RGD:1582661 RGD:1582663 SMP:00015 NCBI chr 6:53,052,145...53,102,794
Ensembl chr 6:54,687,315...54,734,994 		JBrowse link
G GCLM glutamate-cysteine ligase modifier subunit ISO RGD
SMPDB		 PMID:16137247 PMID:16183645 RGD:1582661 RGD:1582663 SMP:00015 NCBI chr 1:96,548,850...96,573,273
Ensembl chr 1:95,278,665...95,297,893 		JBrowse link
G GGCT gamma-glutamylcyclotransferase ISO SMPDB SMP:00015 NCBI chr 7:31,125,964...31,134,330
Ensembl chr 7:31,247,760...31,255,903 		JBrowse link
G GGT6 gamma-glutamyltransferase 6 ISO SMPDB SMP:00015 NCBI chr17:4,611,707...4,615,336
Ensembl chr17:4,604,393...4,608,037 		JBrowse link
G GPX1 glutathione peroxidase 1 ISO SMPDB SMP:00015 NCBI chr 3:49,280,038...49,281,455
Ensembl chr 3:50,360,947...50,361,826 		JBrowse link
G GSR glutathione-disulfide reductase ISO SMPDB SMP:00015 NCBI chr 8:29,990,543...30,040,157
Ensembl chr 8:27,180,300...27,229,557 		JBrowse link
G GSS glutathione synthetase ISO SMPDB SMP:00015 NCBI chr20:31,256,734...31,284,356
Ensembl chr20:32,381,745...32,409,297 		JBrowse link
G GSTO2 glutathione S-transferase omega 2 ISO SMPDB SMP:00015 NCBI chr10:100,868,109...100,901,013
Ensembl chr10:104,326,175...104,357,604 		JBrowse link
G OPLAH 5-oxoprolinase, ATP-hydrolysing ISO SMPDB SMP:00015 Ensembl chr 8:143,809,440...143,818,219 JBrowse link
glycerolipid metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1 ISO SMPDB SMP:00039 NCBI chr 6:31,815,586...31,823,526
Ensembl chr 6:32,695,475...32,704,432 		JBrowse link
G AKR1B1 aldo-keto reductase family 1 member B ISO SMPDB SMP:00039 NCBI chr 7:126,400,861...126,417,756
Ensembl chr 7:138,912,953...138,924,095 		JBrowse link
G ALDH3A1 aldehyde dehydrogenase 3 family member A1 ISO SMPDB SMP:00039 NCBI chr17:31,384,740...31,395,719
Ensembl chr17:36,531,720...36,542,504 		JBrowse link
G DGKA diacylglycerol kinase alpha ISO SMPDB SMP:00039 NCBI chr12:32,958,287...32,981,164
Ensembl chr12:33,207,947...33,701,912 		JBrowse link
G GK glycerol kinase ISO SMPDB SMP:00039 NCBI chr  X:23,250,290...23,327,373
Ensembl chr  X:30,806,950...30,877,131 		JBrowse link
G GLYCTK glycerate kinase ISO SMPDB SMP:00039 NCBI chr 3:52,230,128...52,237,561
Ensembl chr 3:53,458,563...53,466,702 		JBrowse link
G GPAM glycerol-3-phosphate acyltransferase, mitochondrial ISO SMPDB SMP:00039 NCBI chr10:108,747,370...108,781,270
Ensembl chr10:112,186,744...112,246,549 		JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 ISO SMPDB SMP:00039 NCBI chr12:38,644,466...38,651,924
Ensembl chr12:39,541,550...39,549,040 		JBrowse link
G GPD2 glycerol-3-phosphate dehydrogenase 2 ISO SMPDB SMP:00039 NCBI chr2B:43,694,744...43,845,764
Ensembl chr2B:160,938,514...161,117,320 		JBrowse link
G LIPC lipase C, hepatic type ISO SMPDB SMP:00039 NCBI chr15:37,363,507...37,537,723
Ensembl chr15:55,814,017...55,847,005 		JBrowse link
G LPL lipoprotein lipase ISO SMPDB SMP:00039 NCBI chr 8:19,164,541...19,193,100
Ensembl chr 8:16,113,415...16,142,966 		JBrowse link
G PLPP1 phospholipid phosphatase 1 ISO SMPDB SMP:00039 NCBI chr 5:58,495,348...58,605,309
Ensembl chr 5:60,160,274...60,227,806 		JBrowse link
G PLPP2 phospholipid phosphatase 2 ISO SMPDB SMP:00039 Ensembl chr19:238,770...246,004 JBrowse link
glycerophospholipid metabolic pathway term browser