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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal substantia nigra pars compacta morphology
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Accession:MP:0013219 term browser browse the term
Definition:any structural anomaly of the posterior (dorsal) part of grey matter of the substantia nigra which contains large, polygonal, and densely packed dopamine-producing cells; pars compacta neurons are pigmented in many species
Synonyms:exact_synonym: abnormal SNPC morphology;   abnormal compact part of substantia nigra;   abnormal pars compacta substantiae nigrae morphology



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abnormal substantia nigra pars compacta morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 IMP compared to wild-type and untreated RGD PMID:29530712 RGD:40924655 NCBI chr 7:132,368,399...132,389,300
Ensembl chr 7:132,374,840...132,389,297
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G Nr4a1m1Mcwi nuclear receptor subfamily 4, group A, member 1; mutation 1, Medical College of Wisconsin IMP compared to wild-type and untreated RGD PMID:29530712 RGD:40924655

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  mammalian phenotype 5364
    nervous system phenotype 360
      abnormal nervous system morphology 208
        abnormal brain morphology 136
          abnormal forebrain morphology 79
            abnormal basal ganglion morphology 7
              abnormal substantia nigra morphology 7
                abnormal substantia nigra pars compacta morphology 4
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