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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal neck morphology
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Accession:MP:0012719 term browser browse the term
Definition:any structural anomaly of the part of body by which the head is connected to the trunk extending from the base of the cranium to the top of the shoulders
Synonyms:broad_synonym: Abnormality of the neck
 xref: HP:0000464


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abnormal neck morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cilk1 ciliogenesis associated kinase 1 IAGP MGI PMID:29098359 NCBI chr 9:78,016,425...78,079,396
Ensembl chr 9:78,016,474...78,079,389 		JBrowse link
abnormal laryngeal muscle morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2ird1 general transcription factor II I repeat domain-containing 1 IAGP MGI PMID:22198572 NCBI chr 5:134,386,515...134,485,628
Ensembl chr 5:134,386,510...134,485,570 		JBrowse link
G Myog myogenin IAGP MGI PMID:10696067 NCBI chr 1:134,217,742...134,220,286
Ensembl chr 1:134,217,727...134,220,286 		JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:15385444 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
abnormal neck muscle morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 IAGP MGI PMID:8152482 NCBI chr13:42,454,952...42,461,466
Ensembl chr13:42,454,952...42,461,466 		JBrowse link
abnormal nuchal region morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap13 A kinase anchor protein 13 IAGP MGI PMID:20139090 NCBI chr 7:75,105,271...75,404,357
Ensembl chr 7:75,105,282...75,404,357 		JBrowse link
abnormal scalene muscle morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmd dystrophin, muscular dystrophy IAGP MGI PMID:1865908 NCBI chr  X:81,858,244...84,248,656
Ensembl chr  X:81,992,476...84,249,747 		JBrowse link
elongated neck term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ift122 intraflagellar transport 122 IAGP MGI PMID:19000668 NCBI chr 6:115,830,340...115,903,660
Ensembl chr 6:115,830,431...115,903,660 		JBrowse link
G Mbd4 methyl-CpG binding domain protein 4 IAGP MGI PMID:19000668 NCBI chr 6:115,817,658...115,830,361
Ensembl chr 6:115,817,658...115,830,332 		JBrowse link
nuchal edema term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 a disintegrin and metallopeptidase domain 17 IAGP MGI PMID:20976179 NCBI chr12:21,373,510...21,423,633
Ensembl chr12:21,373,510...21,423,633 		JBrowse link
G Casz1 castor zinc finger 1 IAGP MGI PMID:25190801 NCBI chr 4:148,888,823...149,039,350
Ensembl chr 4:148,888,886...149,039,346 		JBrowse link
G Cdk13 cyclin dependent kinase 13 IAGP MGI PMID:31440507 NCBI chr13:17,885,309...17,979,960
Ensembl chr13:17,884,900...17,979,682 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 IAGP MGI PMID:19017799 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 IAGP MGI PMID:19017799 NCBI chr 7:126,358,798...126,364,988
Ensembl chr 7:126,358,773...126,364,991 		JBrowse link
G Mymx myomixer, myoblast fusion factor IAGP MGI PMID:28569755 NCBI chr17:45,911,887...45,913,122
Ensembl chr17:45,911,897...45,913,028 		JBrowse link
G Nprl3 nitrogen permease regulator-like 3 IAGP MGI PMID:22538705 NCBI chr11:32,181,963...32,217,707
Ensembl chr11:32,175,628...32,217,707 		JBrowse link
G Svep1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 IAGP MGI PMID:28179432 NCBI chr 4:58,042,796...58,206,596
Ensembl chr 4:58,042,442...58,206,859 		JBrowse link
short neck term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cilk1 ciliogenesis associated kinase 1 IAGP MGI PMID:29098359 NCBI chr 9:78,016,425...78,079,396
Ensembl chr 9:78,016,474...78,079,389 		JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:11242110 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421 		JBrowse link
webbed neck term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:19706403 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17065
    growth/size/body region phenotype 6988
      abnormal neck morphology 18
        abnormal neck muscle morphology + 5
        abnormal neck skin morphology + 1
        abnormal nuchal region morphology + 9
        absent neck 0
        elongated neck 2
        greasy head/neck 0
        short neck 2
paths to the root