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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal brain copper level
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Accession:MP:0011213 term browser browse the term
Definition:an anomaly in the amount of copper present in brain tissue



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decreased brain copper level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atox1 antioxidant 1 copper chaperone IAGP MGI PMID:11391006 NCBI chr11:55,337,463...55,352,034
Ensembl chr11:55,337,467...55,352,065
JBrowse link
G Atp7a ATPase, copper transporting, alpha polypeptide IAGP MGI PMID:4858102 PMID:6685755 PMID:16338116 PMID:20831904 PMID:22869751 More... NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532
JBrowse link
G Prnp prion protein IAGP MGI PMID:14511115 NCBI chr 2:131,751,848...131,780,356
Ensembl chr 2:131,751,848...131,780,349
JBrowse link
G Slc31a1 solute carrier family 31, member 1 IAGP MGI PMID:11391004 NCBI chr 4:62,278,821...62,310,006
Ensembl chr 4:62,278,964...62,310,006
JBrowse link
decreased brainstem copper level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase, copper transporting, alpha polypeptide IEA MGI NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532
JBrowse link
increased brain copper level term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase, copper transporting, alpha polypeptide IAGP MGI PMID:27293072 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532
JBrowse link
G Atp7b ATPase, copper transporting, beta polypeptide IAGP MGI PMID:8040371 PMID:14617772 NCBI chr 8:22,482,799...22,550,347
Ensembl chr 8:22,482,801...22,550,321
JBrowse link
G Prnp prion protein IAGP MGI PMID:14511115 NCBI chr 2:131,751,848...131,780,356
Ensembl chr 2:131,751,848...131,780,349
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17090
    nervous system phenotype 4653
      abnormal nervous system morphology 3676
        abnormal brain morphology 2186
          abnormal brain copper level 5
            abnormal brainstem copper level + 1
            decreased brain copper level + 4
            increased brain copper level + 3
Path 2
Term Annotations click to browse term
  mammalian phenotype 17090
    homeostasis/metabolism phenotype 7931
      abnormal homeostasis 7064
        abnormal mineral homeostasis 1125
          abnormal mineral level 1115
            abnormal copper level 17
              abnormal brain copper level 5
                abnormal brainstem copper level + 1
                decreased brain copper level + 4
                increased brain copper level + 3
paths to the root