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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal extraembryonic coelom morphology
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Accession:MP:0011200 term browser browse the term
Definition:any structural anomaly of the fluid-filled spaces formed within the mass of extraembryonic mesoderm that later fuse to become a large extraembryonic cavity
Comment:Note that there is a great deal of confusion in the literature regarding the term exocoelomic cavity. It is frequently and erroneously used as a synonym for primary yolk sac cavity.
Synonyms:exact_synonym: abnormal chorion cavity morphology;   abnormal chorionic cavity morphology;   abnormal exocoelom morphology;   abnormal exocoelomic cavity morphology;   abnormal extraembryonic celom morphology


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abnormal extraembryonic coelom morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor IAGP MGI PMID:10477764 NCBI chr17:13,980,735...14,126,059
Ensembl chr17:13,980,801...14,126,412 		JBrowse link
G Ctdnep1 CTD nuclear envelope phosphatase 1 IAGP MGI PMID:23469192 NCBI chr11:69,871,994...69,881,427
Ensembl chr11:69,871,982...69,881,427 		JBrowse link
G Dad1 defender against cell death 1 IAGP MGI PMID:10720432 NCBI chr14:54,472,942...54,491,386
Ensembl chr14:54,472,936...54,491,561 		JBrowse link
G Gata4 GATA binding protein 4 IAGP MGI PMID:9136933 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Kat2a K(lysine) acetyltransferase 2A IAGP MGI PMID:11017084 NCBI chr11:100,595,572...100,603,293
Ensembl chr11:100,595,572...100,603,291 		JBrowse link
G Pagr1a PAXIP1 associated glutamate rich protein 1A IAGP MGI PMID:24633704 NCBI chr 7:126,614,223...126,616,524
Ensembl chr 7:126,614,205...126,616,524
Ensembl chr 7:126,614,205...126,616,524 		JBrowse link
G Rangap1 RAN GTPase activating protein 1 IAGP MGI PMID:8314081 NCBI chr15:81,588,449...81,614,120
Ensembl chr15:81,588,449...81,629,731 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit IAGP MGI PMID:15385962 NCBI chr11:79,883,932...79,924,949
Ensembl chr11:79,883,932...79,924,949 		JBrowse link
G Tfap2c transcription factor AP-2, gamma IAGP MGI PMID:12015300 NCBI chr 2:172,387,599...172,400,542
Ensembl chr 2:172,391,513...172,400,542 		JBrowse link
G Trim28 tripartite motif-containing 28 IAGP MGI PMID:22110054 NCBI chr 7:12,758,079...12,764,959
Ensembl chr 7:12,733,041...12,764,962 		JBrowse link
G Tsix X (inactive)-specific transcript, opposite strand IAGP MGI PMID:11262229 NCBI chr  X:102,475,123...102,528,563
Ensembl chr  X:102,475,123...102,533,557 		JBrowse link
G Washc1 WASH complex subunit 1 IAGP MGI PMID:23974797 NCBI chr17:66,418,524...66,427,498
Ensembl chr17:66,418,540...66,427,498 		JBrowse link
absent extraembryonic coelom term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arfrp1 ARF related protein 1 IAGP MGI PMID:11839814 NCBI chr 2:180,999,483...181,007,197
Ensembl chr 2:180,999,483...181,007,197 		JBrowse link
G Exosc1 exosome component 1 IAGP MGI PMID:37940010 NCBI chr19:41,911,417...41,921,836
Ensembl chr19:41,910,731...41,921,862 		JBrowse link
G Pelo pelota mRNA surveillance and ribosome rescue factor IAGP MGI PMID:12556505 NCBI chr13:115,224,891...115,226,694
Ensembl chr13:115,224,891...115,226,722 		JBrowse link
G Rab10 RAB10, member RAS oncogene family IAGP MGI PMID:25860786 NCBI chr12:3,297,428...3,359,969
Ensembl chr12:3,297,428...3,359,969 		JBrowse link
G Tln1 talin 1 IAGP MGI PMID:11084655 NCBI chr 4:43,531,513...43,562,583
Ensembl chr 4:43,531,519...43,562,691 		JBrowse link
G Trim59 tripartite motif-containing 59 IAGP MGI PMID:29467473 NCBI chr 3:68,942,625...68,952,075
Ensembl chr 3:68,942,621...68,952,088 		JBrowse link
Term paths to the root
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Term Annotations click to browse term
  mammalian phenotype 17275
    embryo phenotype 2551
      abnormal extraembryonic tissue morphology 1006
        abnormal extraembryonic coelom morphology 18
          absent extraembryonic coelom 6
paths to the root