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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal extraembryonic ectoderm morphology
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Accession:MP:0010736 term browser browse the term
Definition:any structural anomaly of the layer of the ectoderm of the extraembryonic tissue


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abnormal extraembryonic ectoderm morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1b activin A receptor, type 1B IAGP MGI PMID:9512518 NCBI chr15:101,071,953...101,111,565
Ensembl chr15:101,071,948...101,111,565 		JBrowse link
G Arc activity regulated cytoskeletal-associated protein IAGP MGI PMID:10727859 NCBI chr15:74,540,930...74,544,419
Ensembl chr15:74,540,932...74,544,419 		JBrowse link
G Atad3a ATPase family, AAA domain containing 3A IAGP MGI PMID:23372768 NCBI chr 4:155,825,097...155,845,579
Ensembl chr 4:155,825,098...155,845,550 		JBrowse link
G Bmp5 bone morphogenetic protein 5 IAGP MGI PMID:5021246 NCBI chr 9:75,682,647...75,807,598
Ensembl chr 9:75,682,646...75,807,592 		JBrowse link
G Borcs6 BLOC-1 related complex subunit 6 IAGP MGI PMID:35726782 NCBI chr11:68,950,601...68,952,402
Ensembl chr11:68,950,543...68,952,404 		JBrowse link
G Cul3 cullin 3 IAGP MGI PMID:10500095 NCBI chr 1:80,242,640...80,318,426
Ensembl chr 1:80,242,640...80,318,197 		JBrowse link
G Edil3 EGF-like repeats and discoidin I-like domains 3 IAGP MGI PMID:22669107 NCBI chr13:88,969,591...89,471,344
Ensembl chr13:88,969,591...89,471,342 		JBrowse link
G Fdxr ferredoxin reductase IAGP MGI PMID:28747430 NCBI chr11:115,158,850...115,167,925
Ensembl chr11:115,158,850...115,167,876 		JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme IAGP MGI PMID:12447384 NCBI chr 7:80,038,942...80,055,188
Ensembl chr 7:80,038,333...80,055,184 		JBrowse link
G Nodal nodal growth differentiation factor IAGP MGI PMID:7924997 NCBI chr10:61,253,751...61,261,117
Ensembl chr10:61,253,751...61,261,117 		JBrowse link
G Pagr1a PAXIP1 associated glutamate rich protein 1A IAGP MGI PMID:24633704 NCBI chr 7:126,614,223...126,616,524
Ensembl chr 7:126,614,205...126,616,524
Ensembl chr 7:126,614,205...126,616,524 		JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 IAGP MGI PMID:12447384 NCBI chr 7:65,511,884...65,700,134
Ensembl chr 7:65,511,482...65,700,134 		JBrowse link
G Pofut2 protein O-fucosyltransferase 2 IAGP MGI PMID:20637190 NCBI chr10:77,095,056...77,105,420
Ensembl chr10:77,095,052...77,105,409 		JBrowse link
G Pou2f1 POU domain, class 2, transcription factor 1 IAGP MGI PMID:20876643 NCBI chr 1:165,692,719...165,830,318
Ensembl chr 1:165,692,723...165,830,247 		JBrowse link
G Ppp1r8 protein phosphatase 1, regulatory subunit 8 IAGP MGI PMID:15199142 NCBI chr 4:132,554,235...132,570,480
Ensembl chr 4:132,554,240...132,570,480 		JBrowse link
G Rab10 RAB10, member RAS oncogene family IAGP MGI PMID:25860786 NCBI chr12:3,297,428...3,359,969
Ensembl chr12:3,297,428...3,359,969 		JBrowse link
G Smad1 SMAD family member 1 IAGP MGI PMID:15198985 NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147 		JBrowse link
G Taf13 TATA-box binding protein associated factor 13 IAGP MGI PMID:38593904 NCBI chr 3:108,479,015...108,489,384
Ensembl chr 3:108,479,014...108,490,538 		JBrowse link
G Tfap2c transcription factor AP-2, gamma IAGP MGI PMID:12015300 NCBI chr 2:172,387,599...172,400,542
Ensembl chr 2:172,391,513...172,400,542 		JBrowse link
G Xist inactive X specific transcripts IAGP MGI PMID:19036803 NCBI chr  X:102,503,979...102,526,839
Ensembl chr  X:102,503,972...102,537,573 		JBrowse link
G Yy1 YY1 transcription factor IAGP MGI PMID:22669107 NCBI chr12:108,758,841...108,786,074
Ensembl chr12:108,758,899...108,786,074 		JBrowse link
absent extraembryonic ectoderm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad3a ATPase family, AAA domain containing 3A IAGP MGI PMID:23372768 NCBI chr 4:155,825,097...155,845,579
Ensembl chr 4:155,825,098...155,845,550 		JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 IAGP MGI PMID:25480920 NCBI chr17:15,925,229...15,992,874
Ensembl chr17:15,925,229...15,992,872 		JBrowse link
G Dag1 dystroglycan 1 IAGP MGI PMID:9175728 NCBI chr 9:108,082,060...108,141,176
Ensembl chr 9:108,081,833...108,141,157 		JBrowse link
G Elf5 E74-like factor 5 IAGP MGI PMID:15829518 NCBI chr 2:103,242,443...103,281,334
Ensembl chr 2:103,242,033...103,281,334 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 IAGP MGI PMID:14502223 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317 		JBrowse link
G Nanog Nanog homeobox IAGP MGI PMID:12787504 NCBI chr 6:122,684,448...122,691,592
Ensembl chr 6:122,684,448...122,691,592 		JBrowse link
G Nbn nibrin IAGP MGI PMID:11231126 NCBI chr 4:15,955,388...15,992,589
Ensembl chr 4:15,957,925...15,992,589 		JBrowse link
G Nf2 neurofibromin 2 IAGP MGI PMID:9171370 NCBI chr11:4,715,845...4,799,544
Ensembl chr11:4,715,845...4,799,536 		JBrowse link
G Smad2 SMAD family member 2 IAGP MGI PMID:9689088 NCBI chr18:76,369,898...76,444,819
Ensembl chr18:76,374,651...76,444,034 		JBrowse link
G Trim33 tripartite motif-containing 33 IAGP MGI PMID:20573697 NCBI chr 3:103,186,609...103,266,086
Ensembl chr 3:103,186,609...103,266,091 		JBrowse link
G Trim59 tripartite motif-containing 59 IAGP MGI PMID:29467473 NCBI chr 3:68,942,625...68,952,075
Ensembl chr 3:68,942,621...68,952,088 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17065
    embryo phenotype 2533
      abnormal extraembryonic tissue morphology 1003
        abnormal extraembryonic ectoderm morphology 31
          absent extraembryonic ectoderm 11
paths to the root