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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal gamma-delta T cell differentiation
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Accession:MP:0008356 term browser browse the term
Definition:atypical production of or inability to produce gamma-delta T cells, and/or accumulation of gamma-delta T cell precursors
Comment:Note that gamma-delta T cell have both thymic and extrathymic differentiation pathways.
Synonyms:exact_synonym: abnormal gamma-delta T-lymphocyte differentiation


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abnormal gamma-delta T cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd247 CD247 antigen IAGP MGI PMID:22945921 NCBI chr 1:165,607,514...165,698,722
Ensembl chr 1:165,616,250...165,704,846 		JBrowse link
G Il2rg interleukin 2 receptor, gamma chain IAGP MGI PMID:9334367 NCBI chr  X:100,307,991...100,311,861
Ensembl chr  X:100,307,984...100,311,861 		JBrowse link
G Il7r interleukin 7 receptor IAGP MGI PMID:8692964 NCBI chr15:9,505,880...9,530,270
Ensembl chr15:9,505,874...9,530,262 		JBrowse link
G Jag2 jagged 2 IAGP MGI PMID:9531541 NCBI chr12:112,871,439...112,893,437
Ensembl chr12:112,871,439...112,893,396 		JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:12065839 PMID:12970761 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742 		JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:12531919 NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874 		JBrowse link
G Tcrd T-cell receptor delta chain IAGP MGI PMID:8381716 NCBI chr14:54,183,530...54,396,655 JBrowse link
G Tcrg T cell receptor gamma chain IAGP MGI PMID:11911829 NCBI chr13:19,362,212...19,540,646 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16963
    immune system phenotype 5709
      abnormal immune system morphology 4077
        abnormal immune system development 912
          abnormal leukopoiesis 870
            abnormal lymphopoiesis 747
              abnormal T cell differentiation 489
                abnormal gamma-delta T cell differentiation 8
Path 2
Term Annotations click to browse term
  mammalian phenotype 16963
    hematopoietic system phenotype 5543
      abnormal hematopoietic system morphology/development 5069
        abnormal hematopoietic cell morphology 4235
          abnormal blood cell morphology 3179
            abnormal hemopoiesis 1157
              abnormal definitive hematopoiesis 1130
                abnormal leukopoiesis 870
                  abnormal lymphopoiesis 747
                    abnormal T cell differentiation 489
                      abnormal gamma-delta T cell differentiation 8
paths to the root