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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal rete testis morphology
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Accession:MP:0006416 term browser browse the term
Definition:any structural anomaly of the network of canals at the termination of the straight tubules in the mediastinum testis
Synonyms:exact_synonym: abnormal Haller rete;   abnormal rete halleri


show annotations for term's descendants           Sort by:
abnormal rete testis morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Esr1 estrogen receptor 1 (alpha) IAGP MGI PMID:10976058 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614 		JBrowse link
G Esr2 estrogen receptor 2 (beta) IAGP MGI PMID:10976058 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 IAGP MGI PMID:16406039 NCBI chr 2:109,747,919...109,844,602
Ensembl chr 2:109,747,992...109,844,602 		JBrowse link
G Ncoa2 nuclear receptor coactivator 2 IAGP MGI PMID:12138202 NCBI chr 1:13,209,329...13,444,451
Ensembl chr 1:13,209,329...13,444,307 		JBrowse link
dilated rete testis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 IAGP MGI PMID:11698654 NCBI chr 6:55,313,284...55,325,540
Ensembl chr 6:55,313,417...55,325,540 		JBrowse link
G Car2 carbonic anhydrase 2 IAGP MGI PMID:11698654 NCBI chr 3:14,951,329...14,965,830
Ensembl chr 3:14,951,333...14,965,830 		JBrowse link
G Cdkn2b cyclin dependent kinase inhibitor 2B IAGP MGI PMID:10880462 NCBI chr 4:89,224,526...89,229,269
Ensembl chr 4:89,224,536...89,229,276 		JBrowse link
G Cdkn2c cyclin dependent kinase inhibitor 2C IAGP MGI PMID:10880462 NCBI chr 4:109,518,073...109,523,953
Ensembl chr 4:109,518,073...109,524,386 		JBrowse link
G Cep164 centrosomal protein 164 IAGP MGI PMID:34085951 NCBI chr 9:45,678,244...45,739,984
Ensembl chr 9:45,678,244...45,739,989 		JBrowse link
G E2f4 E2F transcription factor 4 IAGP MGI PMID:26825228 NCBI chr 8:106,024,295...106,032,002
Ensembl chr 8:106,024,295...106,032,002 		JBrowse link
G E2f5 E2F transcription factor 5 IAGP MGI PMID:26825228 NCBI chr 3:14,638,370...14,671,369
Ensembl chr 3:14,643,701...14,671,369 		JBrowse link
G Esr1 estrogen receptor 1 (alpha) IAGP MGI PMID:8895349 PMID:9393999 PMID:11698654 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 IAGP MGI PMID:17079737 NCBI chr 2:109,747,919...109,844,602
Ensembl chr 2:109,747,992...109,844,602 		JBrowse link
G Slc9a3 solute carrier family 9 (sodium/hydrogen exchanger), member 3 IAGP MGI PMID:11698654 NCBI chr13:74,234,374...74,317,561
Ensembl chr13:74,269,576...74,317,561 		JBrowse link
rete testis obstruction term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep164 centrosomal protein 164 IAGP MGI PMID:34085951 NCBI chr 9:45,678,244...45,739,984
Ensembl chr 9:45,678,244...45,739,989 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 IAGP MGI PMID:16406039 NCBI chr 2:109,747,919...109,844,602
Ensembl chr 2:109,747,992...109,844,602 		JBrowse link
G Nr0b1 nuclear receptor subfamily 0, group B, member 1 IAGP MGI PMID:11564714 NCBI chr  X:85,235,381...85,239,553
Ensembl chr  X:85,235,370...85,239,553 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16725
    reproductive system phenotype 3355
      abnormal reproductive system morphology 2458
        abnormal sex gland morphology 1629
          abnormal male reproductive gland morphology 1371
            abnormal testis morphology 1154
              abnormal rete testis morphology 13
                dilated rete testis 10
                rete testis obstruction 3
Path 2
Term Annotations click to browse term
  mammalian phenotype 16725
    reproductive system phenotype 3355
      abnormal reproductive system morphology 2458
        abnormal male reproductive system morphology 1495
          abnormal male genitalia morphology 1495
            abnormal internal male genitalia morphology 1466
              abnormal testis morphology 1154
                abnormal rete testis morphology 13
                  dilated rete testis 10
                  rete testis obstruction 3
paths to the root