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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal male germ cell morphology
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Accession:MP:0006362 term browser browse the term
Definition:any structural anomaly of male germ cells whether they are undifferentiated or fully differentiated



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azoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sbf1 SET binding factor 1 IAGP DNA:substitution:intron 37:G>A (rat) RGD PMID:27335132 RGD:38549340 NCBI chr 7:120,358,338...120,385,022
Ensembl chr 7:120,358,338...120,384,902
JBrowse link
G Sbf1m1Ipcv SET binding factor 1; mutation 1, Institute of Physiology, Czechoslovac Academy of Sciences IAGP RGD PMID:27335132 RGD:38549340
short sperm flagellum term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmem67 transmembrane protein 67 IAGP RGD PMID:19515853 RGD:8554306 NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 5402
    cellular phenotype 190
      abnormal cell morphology 47
        abnormal germ cell morphology 11
          abnormal male germ cell morphology 4
            abnormal spermatid morphology + 0
            abnormal spermatocyte morphology 0
            abnormal spermatogonia morphology 0
            decreased male germ cell number + 3
            multinucleated giant male germ cells 0
            teratozoospermia + 1
Path 2
Term Annotations click to browse term
  mammalian phenotype 5402
    reproductive system phenotype 129
      abnormal reproductive system morphology 97
        abnormal gametogenesis 20
          abnormal germ cell morphology 11
            abnormal male germ cell morphology 4
              abnormal spermatid morphology + 0
              abnormal spermatocyte morphology 0
              abnormal spermatogonia morphology 0
              decreased male germ cell number + 3
              multinucleated giant male germ cells 0
              teratozoospermia + 1
paths to the root