Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:abnormal retinal neuronal layer morphology
go back to main search page
Accession:MP:0006069 term browser browse the term
Definition:any structural anomaly of any of the neuronal layers that make up the retina, including the ganglion cell, inner plexiform, inner nuclear, outer plexiform, outer nuclear layers, the inner and outer segments


show annotations for term's descendants       view all columns           Sort by:
 
abnormal retinal neuronal layer morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam9 a disintegrin and metallopeptidase domain 9 (meltrin gamma) JBrowse link 8 24,949,611 25,017,040 RGD:5509061
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 JBrowse link 11 72,028,717 72,042,460 RGD:5509061
G Apaf1 apoptotic peptidase activating factor 1 JBrowse link 10 90,989,311 91,082,743 RGD:5509061
G Arl6 ADP-ribosylation factor-like 6 JBrowse link 16 59,612,949 59,639,409 RGD:5509061
G Atoh7 atonal bHLH transcription factor 7 JBrowse link 10 63,099,785 63,101,280 RGD:5509061
G Atp1b2 ATPase, Na+/K+ transporting, beta 2 polypeptide JBrowse link 11 69,599,728 69,605,978 RGD:5509061
G Cabp4 calcium binding protein 4 JBrowse link 19 4,135,423 4,144,080 RGD:5509061
G Cacna1f calcium channel, voltage-dependent, alpha 1F subunit JBrowse link X 7,607,103 7,635,196 RGD:5509061
G Cdkn1b cyclin-dependent kinase inhibitor 1B JBrowse link 6 134,920,401 134,925,525 RGD:5509061
G Cdkn2a cyclin dependent kinase inhibitor 2A JBrowse link 4 89,274,473 89,294,619 RGD:5509061
G Clcn3 chloride channel, voltage-sensitive 3 JBrowse link 8 60,910,389 60,983,317 RGD:5509061
G Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) JBrowse link 7 126,571,207 126,585,817 RGD:5509061
G Cnga3 cyclic nucleotide gated channel alpha 3 JBrowse link 1 37,218,241 37,263,384 RGD:5509061
G Col4a1 collagen, type IV, alpha 1 JBrowse link 8 11,198,423 11,312,889 RGD:5509061
G Crb2 crumbs family member 2 JBrowse link 2 37,776,225 37,799,103 RGD:5509061
G Dnm1 dynamin 1 JBrowse link 2 32,308,471 32,353,349 RGD:5509061
G Dnm2 dynamin 2 JBrowse link 9 21,424,908 21,507,759 RGD:5509061
G Dscam DS cell adhesion molecule JBrowse link 16 96,587,452 97,171,113 RGD:5509061
G Edil3 EGF-like repeats and discoidin I-like domains 3 JBrowse link 13 88,821,472 89,323,225 RGD:5509061
G Fat1 FAT atypical cadherin 1 JBrowse link 8 44,933,100 45,052,257 RGD:5509061
G Fat3 FAT atypical cadherin 3 JBrowse link 9 15,910,189 16,502,681 RGD:5509061
G Fjx1 four jointed box 1 JBrowse link 2 102,449,366 102,451,792 RGD:5509061
G Foxg1 forkhead box G1 JBrowse link 12 49,382,883 49,386,867 RGD:5509061
G Foxn4 forkhead box N4 JBrowse link 5 114,254,164 114,274,418 RGD:5509061
G Fst follistatin JBrowse link 13 114,452,262 114,458,989 RGD:5509061
G Gas1 growth arrest specific 1 JBrowse link 13 60,174,405 60,177,535 RGD:5509061
G Gdf11 growth differentiation factor 11 JBrowse link 10 128,880,524 128,891,718 RGD:5509061
G Gnat1 guanine nucleotide binding protein, alpha transducing 1 JBrowse link 9 107,674,437 107,679,634 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Hes1 hes family bHLH transcription factor 1 JBrowse link 16 30,065,357 30,067,796 RGD:5509061
G Icmt isoprenylcysteine carboxyl methyltransferase JBrowse link 4 152,297,214 152,307,126 RGD:5509061
G Ins2 insulin II JBrowse link 7 142,678,656 142,679,726 RGD:5509061
G Lama1 laminin, alpha 1 JBrowse link 17 67,697,127 67,822,645 RGD:5509061
G Large1 LARGE xylosyl- and glucuronyltransferase 1 JBrowse link 8 72,814,598 73,353,721 RGD:5509061
G Lemd2 LEM domain containing 2 JBrowse link 17 27,189,600 27,205,470 RGD:5509061
G Lrit3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3 JBrowse link 3 129,783,941 129,804,136 RGD:5509061
G Lrp5 low density lipoprotein receptor-related protein 5 JBrowse link 19 3,584,825 3,686,585 RGD:5509061
G Macf1 microtubule-actin crosslinking factor 1 JBrowse link 4 123,349,633 123,687,802 RGD:5509061
G Mitf melanogenesis associated transcription factor JBrowse link 6 97,807,002 98,021,360 RGD:5509061
G Neurod1 neurogenic differentiation 1 JBrowse link 2 79,452,637 79,456,636 RGD:5509061
G Neurod4 neurogenic differentiation 4 JBrowse link 10 130,268,152 130,280,254 RGD:5509061
G Neurog2 neurogenin 2 JBrowse link 3 127,632,733 127,635,636 RGD:5509061
G Nrf1 nuclear respiratory factor 1 JBrowse link 6 30,047,985 30,153,458 RGD:5509061
G Nuak1 NUAK family, SNF1-like kinase, 1 JBrowse link 10 84,370,900 84,440,668 RGD:5509061
G Nuak2 NUAK family, SNF1-like kinase, 2 JBrowse link 1 132,316,125 132,333,488 RGD:5509061
G Pax2 paired box 2 JBrowse link 19 44,746,601 44,838,269 RGD:5509061
G Pdgfb platelet derived growth factor, B polypeptide JBrowse link 15 79,995,865 80,024,614 RGD:5509061
G Phactr4 phosphatase and actin regulator 4 JBrowse link 4 132,355,922 132,422,446 RGD:5509061
G Pknox1 Pbx/knotted 1 homeobox JBrowse link 17 31,564,722 31,607,693 RGD:5509061
G Ppt1 palmitoyl-protein thioesterase 1 JBrowse link 4 122,836,077 122,859,175 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Ptf1a pancreas specific transcription factor, 1a JBrowse link 2 19,445,663 19,447,501 RGD:5509061
G Ptprf protein tyrosine phosphatase, receptor type, F JBrowse link 4 118,208,213 118,291,405 RGD:5509061
G Ptprs protein tyrosine phosphatase, receptor type, S JBrowse link 17 56,412,426 56,476,561 RGD:5509061
G Rab23 RAB23, member RAS oncogene family JBrowse link 1 33,719,896 33,742,564 RGD:5509061
G Rarb retinoic acid receptor, beta JBrowse link 14 16,430,839 17,082,331 RGD:5509061
G Rarg retinoic acid receptor, gamma JBrowse link 15 102,234,938 102,257,522 RGD:5509061
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:5509061
G Rbl2 RB transcriptional corepressor like 2 JBrowse link 8 91,070,057 91,123,844 RGD:5509061
G Rdh12 retinol dehydrogenase 12 JBrowse link 12 79,208,913 79,222,664 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rp1 retinitis pigmentosa 1 (human) JBrowse link 1 4,115,673 4,409,266 RGD:5509061
G Rpl24 ribosomal protein L24 JBrowse link 16 55,966,275 55,971,437 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Rtbdn retbindin JBrowse link 8 84,946,991 84,956,606 RGD:5509061
G Sema5a sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A JBrowse link 15 32,244,813 32,696,341 RGD:5509061
G Sema5b sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B JBrowse link 16 35,541,154 35,664,261 RGD:5509061
G Sv2b synaptic vesicle glycoprotein 2 b JBrowse link 7 75,114,894 75,309,262 RGD:5509061
G Tgfb2 transforming growth factor, beta 2 JBrowse link 1 186,622,787 186,709,697 RGD:5509061
G Tgfb3 transforming growth factor, beta 3 JBrowse link 12 86,056,743 86,079,041 RGD:5509061
G Tgfbr2 transforming growth factor, beta receptor II JBrowse link 9 116,087,695 116,175,363 RGD:5509061
G Tub tubby bipartite transcription factor JBrowse link 7 109,010,880 109,034,459 RGD:5509061
G Tulp1 tubby like protein 1 JBrowse link 17 28,351,515 28,365,216 RGD:5509061
G Vldlr very low density lipoprotein receptor JBrowse link 19 27,216,480 27,254,231 RGD:5509061
abnormal photoreceptor connecting cilium morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agtpbp1 ATP/GTP binding protein 1 JBrowse link 13 59,449,534 59,557,370 RGD:5509061
G Arl13b ADP-ribosylation factor-like 13B JBrowse link 16 62,793,308 62,847,055 RGD:5509061
G Arl2bp ADP-ribosylation factor-like 2 binding protein JBrowse link 8 94,666,600 94,674,457 RGD:5509061
G Arl3 ADP-ribosylation factor-like 3 JBrowse link 19 46,531,109 46,573,182 RGD:5509061
G Cetn2 centrin 2 JBrowse link X 72,913,565 72,918,344 RGD:5509061
G Cetn3 centrin 3 JBrowse link 13 81,780,636 81,797,155 RGD:5509061
G Cx3cr1 chemokine (C-X3-C motif) receptor 1 JBrowse link 9 120,048,683 120,068,296 RGD:5509061
G Fam161a family with sequence similarity 161, member A JBrowse link 11 23,006,721 23,045,743 RGD:5509061
G Gpx4 glutathione peroxidase 4 JBrowse link 10 80,047,166 80,056,439 RGD:5509061
G Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 JBrowse link 12 110,691,036 110,696,395 RGD:5509061
G Macf1 microtubule-actin crosslinking factor 1 JBrowse link 4 123,349,633 123,687,802 RGD:5509061
G Pcare photoreceptor cilium actin regulator JBrowse link 17 71,743,555 71,752,905 RGD:5509061
G Pde6g phosphodiesterase 6G, cGMP-specific, rod, gamma JBrowse link 11 120,447,607 120,453,500 RGD:5509061
G Spata7 spermatogenesis associated 7 JBrowse link 12 98,628,129 98,669,819 RGD:5509061
G Ttll3 tubulin tyrosine ligase-like family, member 3 JBrowse link 6 113,389,260 113,414,592 RGD:5509061
abnormal photoreceptor inner segment morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb5 ATP-binding cassette, sub-family B (MDR/TAP), member 5 JBrowse link 12 118,867,486 118,966,434 RGD:5509061
G Agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 JBrowse link 10 78,269,174 78,352,497 RGD:5509061
G Agtpbp1 ATP/GTP binding protein 1 JBrowse link 13 59,449,534 59,557,370 RGD:5509061
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 JBrowse link 11 72,028,717 72,042,460 RGD:5509061
G Bbs4 Bardet-Biedl syndrome 4 (human) JBrowse link 9 59,321,966 59,353,508 RGD:5509061
G C1qtnf5 C1q and tumor necrosis factor related protein 5 JBrowse link 9 44,101,770 44,109,187 RGD:5509061
G Cc2d2a coiled-coil and C2 domain containing 2A JBrowse link 5 43,662,374 43,740,975 RGD:5509061
G Ccdc66 coiled-coil domain containing 66 JBrowse link 14 27,481,090 27,508,510 RGD:5509061
G Ccl2 chemokine (C-C motif) ligand 2 JBrowse link 11 82,035,577 82,037,452 RGD:5509061
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated JBrowse link 1 139,176,649 139,379,316 RGD:5509061
G Crx cone-rod homeobox JBrowse link 7 15,865,947 15,879,955 RGD:5509061
G Cx3cr1 chemokine (C-X3-C motif) receptor 1 JBrowse link 9 120,048,683 120,068,296 RGD:5509061
G Epg5 ectopic P-granules autophagy protein 5 homolog (C. elegans) JBrowse link 18 77,938,409 78,037,325 RGD:5509061
G Fscn2 fascin actin-bundling protein 2 JBrowse link 11 120,360,165 120,368,173 RGD:5509061
G Gpx4 glutathione peroxidase 4 JBrowse link 10 80,047,166 80,056,439 RGD:5509061
G Ift20 intraflagellar transport 20 JBrowse link 11 78,536,361 78,541,732 RGD:5509061
G Kif3a kinesin family member 3A JBrowse link 11 53,565,701 53,604,248 RGD:5509061
G Lmo7 LIM domain only 7 JBrowse link 14 101,729,928 101,934,708 RGD:5509061
G Mitf melanogenesis associated transcription factor JBrowse link 6 97,807,002 98,021,360 RGD:5509061
G Mpc1 mitochondrial pyruvate carrier 1 JBrowse link 17 8,283,787 8,297,667 RGD:5509061
G Nampt nicotinamide phosphoribosyltransferase JBrowse link 12 32,820,335 32,853,369 RGD:5509061
G Pcare photoreceptor cilium actin regulator JBrowse link 17 71,743,555 71,752,905 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 JBrowse link 6 124,720,707 124,738,709 RGD:5509061
G Rdh13 retinol dehydrogenase 13 (all-trans and 9-cis) JBrowse link 7 4,425,665 4,471,280 RGD:5509061
G Reep6 receptor accessory protein 6 JBrowse link 10 80,329,997 80,336,441 RGD:5509061
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 10,158,216 10,216,795 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Ttc8 tetratricopeptide repeat domain 8 JBrowse link 12 98,920,537 98,983,250 RGD:5509061
G Tub tubby bipartite transcription factor JBrowse link 7 109,010,880 109,034,459 RGD:5509061
G Tulp1 tubby like protein 1 JBrowse link 17 28,351,515 28,365,216 RGD:5509061
G Uchl3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) JBrowse link 14 101,653,892 101,696,125 RGD:5509061
abnormal photoreceptor outer segment diameter term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cetn2 centrin 2 JBrowse link X 72,913,565 72,918,344 RGD:5509061
G Cetn3 centrin 3 JBrowse link 13 81,780,636 81,797,155 RGD:5509061
G Prcd photoreceptor disc component JBrowse link 11 116,653,889 116,668,389 RGD:5509061
abnormal photoreceptor outer segment disc membrane morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 JBrowse link 10 78,269,174 78,352,497 RGD:5509061
G Arl13b ADP-ribosylation factor-like 13B JBrowse link 16 62,793,308 62,847,055 RGD:5509061
G Arl2bp ADP-ribosylation factor-like 2 binding protein JBrowse link 8 94,666,600 94,674,457 RGD:5509061
G C3ar1 complement component 3a receptor 1 JBrowse link 6 122,847,140 122,856,157 RGD:5509061
G C5ar1 complement component 5a receptor 1 JBrowse link 7 16,246,743 16,259,540 RGD:5509061
G Cetn2 centrin 2 JBrowse link X 72,913,565 72,918,344 RGD:5509061
G Cetn3 centrin 3 JBrowse link 13 81,780,636 81,797,155 RGD:5509061
G Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 JBrowse link 12 110,691,036 110,696,395 RGD:5509061
G Ift172 intraflagellar transport 172 JBrowse link 5 31,253,279 31,291,391 RGD:5509061
G Mpc1 mitochondrial pyruvate carrier 1 JBrowse link 17 8,283,787 8,297,667 RGD:5509061
G Prcd photoreceptor disc component JBrowse link 11 116,653,889 116,668,389 RGD:5509061
G Reep6 receptor accessory protein 6 JBrowse link 10 80,329,997 80,336,441 RGD:5509061
abnormal photoreceptor outer segment morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G 2610301B20Rik RIKEN cDNA 2610301B20 gene JBrowse link 4 10,874,044 10,899,425 RGD:5509061
G Abca4 ATP-binding cassette, sub-family A (ABC1), member 4 JBrowse link 3 122,043,891 122,180,070 RGD:5509061
G Abcb5 ATP-binding cassette, sub-family B (MDR/TAP), member 5 JBrowse link 12 118,867,486 118,966,434 RGD:5509061
G Agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 JBrowse link 10 78,269,174 78,352,497 RGD:5509061
G Agtpbp1 ATP/GTP binding protein 1 JBrowse link 13 59,449,534 59,557,370 RGD:5509061
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 JBrowse link 11 72,028,717 72,042,460 RGD:5509061
G Alcam activated leukocyte cell adhesion molecule JBrowse link 16 52,248,996 52,453,081 RGD:5509061
G Arl13b ADP-ribosylation factor-like 13B JBrowse link 16 62,793,308 62,847,055 RGD:5509061
G Arl2bp ADP-ribosylation factor-like 2 binding protein JBrowse link 8 94,666,600 94,674,457 RGD:5509061
G Bbs1 Bardet-Biedl syndrome 1 (human) JBrowse link 19 4,886,878 4,906,653 RGD:5509061
G Bbs10 Bardet-Biedl syndrome 10 (human) JBrowse link 10 111,298,679 111,301,736 RGD:5509061
G Bbs4 Bardet-Biedl syndrome 4 (human) JBrowse link 9 59,321,966 59,353,508 RGD:5509061
G Cc2d2a coiled-coil and C2 domain containing 2A JBrowse link 5 43,662,374 43,740,975 RGD:5509061
G Ccdc66 coiled-coil domain containing 66 JBrowse link 14 27,481,090 27,508,510 RGD:5509061
G Cep290 centrosomal protein 290 JBrowse link 10 100,487,548 100,575,671 RGD:5509061
G Chm choroidermia (RAB escort protein 1) JBrowse link X 113,040,592 113,185,539 RGD:5509061
G Chsy1 chondroitin sulfate synthase 1 JBrowse link 7 66,109,492 66,173,798 RGD:5509061
G Clcn2 chloride channel, voltage-sensitive 2 JBrowse link 16 20,702,435 20,717,746 RGD:5509061
G Crx cone-rod homeobox JBrowse link 7 15,865,947 15,879,955 RGD:5509061
G Elovl4 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 JBrowse link 9 83,778,692 83,806,305 RGD:5509061
G Emc3 ER membrane protein complex subunit 3 JBrowse link 6 113,514,887 113,531,638 RGD:5509061
G Fam161a family with sequence similarity 161, member A JBrowse link 11 23,006,721 23,045,743 RGD:5509061
G Fscn2 fascin actin-bundling protein 2 JBrowse link 11 120,360,165 120,368,173 RGD:5509061
G Gnat2 guanine nucleotide binding protein, alpha transducing 2 JBrowse link 3 108,086,788 108,101,432 RGD:5509061
G Gpx4 glutathione peroxidase 4 JBrowse link 10 80,047,166 80,056,439 RGD:5509061
G Guca1a guanylate cyclase activator 1a (retina) JBrowse link 17 47,394,557 47,413,514 RGD:5509061
G Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 JBrowse link 12 110,691,036 110,696,395 RGD:5509061
G Ift172 intraflagellar transport 172 JBrowse link 5 31,253,279 31,291,391 RGD:5509061
G Lca5 Leber congenital amaurosis 5 (human) JBrowse link 9 83,391,355 83,442,994 RGD:5509061
G Lmo7 LIM domain only 7 JBrowse link 14 101,729,928 101,934,708 RGD:5509061
G Lztfl1 leucine zipper transcription factor-like 1 JBrowse link 9 123,694,404 123,717,625 RGD:5509061
G Mertk MER proto-oncogene tyrosine kinase JBrowse link 2 128,698,915 128,803,162 RGD:5509061
G Mfrp membrane frizzled-related protein JBrowse link 9 44,101,770 44,109,187 RGD:5509061
G Mpp5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) JBrowse link 12 78,748,882 78,840,714 RGD:5509061
G Nampt nicotinamide phosphoribosyltransferase JBrowse link 12 32,820,335 32,853,369 RGD:5509061
G Nphp4 nephronophthisis 4 (juvenile) homolog (human) JBrowse link 4 152,476,706 152,563,184 RGD:5509061
G Nrl neural retina leucine zipper gene JBrowse link 14 55,518,978 55,524,981 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Pde6g phosphodiesterase 6G, cGMP-specific, rod, gamma JBrowse link 11 120,447,607 120,453,500 RGD:5509061
G Pfdn5 prefoldin 5 JBrowse link 15 102,326,116 102,331,490 RGD:5509061
G Prcd photoreceptor disc component JBrowse link 11 116,653,889 116,668,389 RGD:5509061
G Prkcq protein kinase C, theta JBrowse link 2 11,171,905 11,301,226 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 JBrowse link 6 124,720,707 124,738,709 RGD:5509061
G Rbp1 retinol binding protein 1, cellular JBrowse link 9 98,422,961 98,446,551 RGD:5509061
G Rbp3 retinol binding protein 3, interstitial JBrowse link 14 33,954,003 33,964,219 RGD:5509061
G Reep6 receptor accessory protein 6 JBrowse link 10 80,329,997 80,336,441 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rp1 retinitis pigmentosa 1 (human) JBrowse link 1 4,115,673 4,409,266 RGD:5509061
G Rp1l1 retinitis pigmentosa 1 homolog like 1 JBrowse link 14 63,992,431 64,033,506 RGD:5509061
G Rpe65 retinal pigment epithelium 65 JBrowse link 3 159,599,075 159,625,307 RGD:5509061
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 10,158,216 10,216,795 RGD:5509061
G Rpgrip1 retinitis pigmentosa GTPase regulator interacting protein 1 JBrowse link 14 52,104,241 52,161,339 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Rtbdn retbindin JBrowse link 8 84,946,991 84,956,606 RGD:5509061
G Rxra retinoid X receptor alpha JBrowse link 2 27,676,445 27,763,319 RGD:5509061
G Sema4a sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A JBrowse link 3 88,435,959 88,461,240 RGD:5509061
G Slc24a1 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 JBrowse link 9 64,922,861 64,951,620 RGD:5509061
G Top2b topoisomerase (DNA) II beta JBrowse link 14 16,365,206 16,430,787 RGD:5509061
G Ttc26 tetratricopeptide repeat domain 26 JBrowse link 6 38,381,464 38,427,647 RGD:5509061
G Tub tubby bipartite transcription factor JBrowse link 7 109,010,880 109,034,459 RGD:5509061
G Tulp1 tubby like protein 1 JBrowse link 17 28,351,515 28,365,216 RGD:5509061
G Uchl3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) JBrowse link 14 101,653,892 101,696,125 RGD:5509061
abnormal photoreceptor outer segment size term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epg5 ectopic P-granules autophagy protein 5 homolog (C. elegans) JBrowse link 18 77,938,409 78,037,325 RGD:5509061
G Fscn2 fascin actin-bundling protein 2 JBrowse link 11 120,360,165 120,368,173 RGD:5509061
abnormal retinal cone cell inner segment morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C1qtnf5 C1q and tumor necrosis factor related protein 5 JBrowse link 9 44,101,770 44,109,187 RGD:5509061
G Gucy2e guanylate cyclase 2e JBrowse link 11 69,218,117 69,237,279 RGD:5509061
G Ift20 intraflagellar transport 20 JBrowse link 11 78,536,361 78,541,732 RGD:5509061
abnormal retinal cone cell morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 JBrowse link 11 72,028,717 72,042,460 RGD:5509061
G Atoh7 atonal bHLH transcription factor 7 JBrowse link 10 63,099,785 63,101,280 RGD:5509061
G C1qtnf5 C1q and tumor necrosis factor related protein 5 JBrowse link 9 44,101,770 44,109,187 RGD:5509061
G Cabp4 calcium binding protein 4 JBrowse link 19 4,135,423 4,144,080 RGD:5509061
G Cacna1f calcium channel, voltage-dependent, alpha 1F subunit JBrowse link X 7,607,103 7,635,196 RGD:5509061
G Cnga3 cyclic nucleotide gated channel alpha 3 JBrowse link 1 37,218,241 37,263,384 RGD:5509061
G Crb2 crumbs family member 2 JBrowse link 2 37,776,225 37,799,103 RGD:5509061
G Crx cone-rod homeobox JBrowse link 7 15,865,947 15,879,955 RGD:5509061
G Egflam EGF-like, fibronectin type III and laminin G domains JBrowse link 15 7,206,120 7,398,744 RGD:5509061
G Gja10 gap junction protein, alpha 10 JBrowse link 4 32,600,865 32,602,382 RGD:5509061
G Gnat2 guanine nucleotide binding protein, alpha transducing 2 JBrowse link 3 108,086,788 108,101,432 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Gucy2e guanylate cyclase 2e JBrowse link 11 69,218,117 69,237,279 RGD:5509061
G Mir124a-1 microRNA 124a-1 JBrowse link 14 64,590,657 64,590,741 RGD:5509061
G Mir124a-1hg Mir124-1 host gene (non-protein coding) JBrowse link 14 64,588,115 64,593,961 RGD:5509061
G Mirc35hg microRNA cluster 35, host gene JBrowse link 6 30,158,640 30,174,125 RGD:5509061
G Neurod1 neurogenic differentiation 1 JBrowse link 2 79,452,637 79,456,636 RGD:5509061
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 JBrowse link 9 59,942,771 59,960,834 RGD:5509061
G Nrl neural retina leucine zipper gene JBrowse link 14 55,518,978 55,524,981 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 13 101,680,761 101,768,217 RGD:5509061
G Prkcq protein kinase C, theta JBrowse link 2 11,171,905 11,301,226 RGD:5509061
G Prom1 prominin 1 JBrowse link 5 43,993,621 44,102,047 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Rab28 RAB28, member RAS oncogene family JBrowse link 5 41,624,973 41,708,193 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rorb RAR-related orphan receptor beta JBrowse link 19 18,930,609 19,111,196 RGD:5509061
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 10,158,216 10,216,795 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Spata7 spermatogenesis associated 7 JBrowse link 12 98,628,129 98,669,819 RGD:5509061
G Thrb thyroid hormone receptor beta JBrowse link 14 17,659,225 18,040,097 RGD:5509061
G Tmem30a transmembrane protein 30A JBrowse link 9 79,768,941 79,793,430 RGD:5509061
G Top2b topoisomerase (DNA) II beta JBrowse link 14 16,365,206 16,430,787 RGD:5509061
G Ttll5 tubulin tyrosine ligase-like family, member 5 JBrowse link 12 85,824,693 86,053,760 RGD:5509061
abnormal retinal cone cell outer segment morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp8a2 ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 JBrowse link 14 59,647,531 60,086,914 RGD:5509061
G Cetn2 centrin 2 JBrowse link X 72,913,565 72,918,344 RGD:5509061
G Cetn3 centrin 3 JBrowse link 13 81,780,636 81,797,155 RGD:5509061
G Cnga3 cyclic nucleotide gated channel alpha 3 JBrowse link 1 37,218,241 37,263,384 RGD:5509061
G Cngb3 cyclic nucleotide gated channel beta 3 JBrowse link 4 19,280,850 19,510,623 RGD:5509061
G Crb2 crumbs family member 2 JBrowse link 2 37,776,225 37,799,103 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Gucy2e guanylate cyclase 2e JBrowse link 11 69,218,117 69,237,279 RGD:5509061
G Gucy2f guanylate cyclase 2f JBrowse link X 142,079,286 142,197,276 RGD:5509061
G Ift20 intraflagellar transport 20 JBrowse link 11 78,536,361 78,541,732 RGD:5509061
G Lrat lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase) JBrowse link 3 82,892,582 82,903,974 RGD:5509061
G Mef2d myocyte enhancer factor 2D JBrowse link 3 88,141,941 88,172,091 RGD:5509061
G Nrl neural retina leucine zipper gene JBrowse link 14 55,518,978 55,524,981 RGD:5509061
G Prkcq protein kinase C, theta JBrowse link 2 11,171,905 11,301,226 RGD:5509061
G Prom1 prominin 1 JBrowse link 5 43,993,621 44,102,047 RGD:5509061
G Rab28 RAB28, member RAS oncogene family JBrowse link 5 41,624,973 41,708,193 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Sema4a sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A JBrowse link 3 88,435,959 88,461,240 RGD:5509061
G Slc24a1 solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 JBrowse link 9 64,922,861 64,951,620 RGD:5509061
G Top2b topoisomerase (DNA) II beta JBrowse link 14 16,365,206 16,430,787 RGD:5509061
abnormal retinal ganglion cell morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G a nonagouti JBrowse link 2 154,950,599 155,051,012 RGD:5509061
G Atoh7 atonal bHLH transcription factor 7 JBrowse link 10 63,099,785 63,101,280 RGD:5509061
G Bmpr1a bone morphogenetic protein receptor, type 1A JBrowse link 14 34,411,061 34,503,336 RGD:5509061
G Bmpr1b bone morphogenetic protein receptor, type 1B JBrowse link 3 141,837,135 142,169,585 RGD:5509061
G Cacna1f calcium channel, voltage-dependent, alpha 1F subunit JBrowse link X 7,607,103 7,635,196 RGD:5509061
G Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) JBrowse link 7 126,571,207 126,585,817 RGD:5509061
G Col4a1 collagen, type IV, alpha 1 JBrowse link 8 11,198,423 11,312,889 RGD:5509061
G Dscam DS cell adhesion molecule JBrowse link 16 96,587,452 97,171,113 RGD:5509061
G Dscaml1 DS cell adhesion molecule like 1 JBrowse link 9 45,427,433 45,753,713 RGD:5509061
G Eomes eomesodermin JBrowse link 9 118,478,186 118,486,132 RGD:5509061
G Fas Fas (TNF receptor superfamily member 6) JBrowse link 19 34,290,647 34,327,775 RGD:5509061
G Fasl Fas ligand (TNF superfamily, member 6) JBrowse link 1 161,780,691 161,788,495 RGD:5509061
G Foxn4 forkhead box N4 JBrowse link 5 114,254,164 114,274,418 RGD:5509061
G Grn granulin JBrowse link 11 102,430,294 102,436,809 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Hps6 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 JBrowse link 19 46,003,478 46,006,173 RGD:5509061
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 JBrowse link 3 144,429,701 144,570,216 RGD:5509061
G Isl1 ISL1 transcription factor, LIM/homeodomain JBrowse link 13 116,298,270 116,309,688 RGD:5509061
G L1cam L1 cell adhesion molecule JBrowse link X 73,853,780 73,880,838 RGD:5509061
G mt-Nd6 NADH dehydrogenase 6, mitochondrial JBrowse link MT 13,552 14,070 RGD:5509061
G Neurod1 neurogenic differentiation 1 JBrowse link 2 79,452,637 79,456,636 RGD:5509061
G Ngfr nerve growth factor receptor (TNFR superfamily, member 16) JBrowse link 11 95,568,818 95,587,698 RGD:5509061
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 JBrowse link 7 44,549,616 44,553,968 RGD:5509061
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 10 42,561,963 42,583,590 RGD:5509061
G Ntn4 netrin 4 JBrowse link 10 93,641,049 93,745,972 RGD:5509061
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 JBrowse link 13 58,806,472 59,133,970 RGD:5509061
G Opa1 OPA1, mitochondrial dynamin like GTPase JBrowse link 16 29,579,281 29,663,127 RGD:5509061
G Opn4 opsin 4 (melanopsin) JBrowse link 14 34,590,618 34,600,142 RGD:5509061
G Plxna1 plexin A1 JBrowse link 6 89,316,313 89,362,613 RGD:5509061
G Plxna3 plexin A3 JBrowse link X 74,328,290 74,344,689 RGD:5509061
G Plxna4 plexin A4 JBrowse link 6 32,144,543 32,588,192 RGD:5509061
G Pou4f1 POU domain, class 4, transcription factor 1 JBrowse link 14 104,461,675 104,468,118 RGD:5509061
G Pou4f2 POU domain, class 4, transcription factor 2 JBrowse link 8 78,433,009 78,436,647 RGD:5509061
G Pou4f3 POU domain, class 4, transcription factor 3 JBrowse link 18 42,394,597 42,396,093 RGD:5509061
G Ptpn13 protein tyrosine phosphatase, non-receptor type 13 JBrowse link 5 103,425,192 103,598,361 RGD:5509061
G Ptprf protein tyrosine phosphatase, receptor type, F JBrowse link 4 118,208,213 118,291,405 RGD:5509061
G Rorb RAR-related orphan receptor beta JBrowse link 19 18,930,609 19,111,196 RGD:5509061
G Sema5a sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A JBrowse link 15 32,244,813 32,696,341 RGD:5509061
G Sema5b sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B JBrowse link 16 35,541,154 35,664,261 RGD:5509061
G Sema6a sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A JBrowse link 18 47,245,254 47,371,200 RGD:5509061
G Shh sonic hedgehog JBrowse link 5 28,456,840 28,467,101 RGD:5509061
G Slc25a46 solute carrier family 25, member 46 JBrowse link 18 31,580,164 31,610,532 RGD:5509061
G Sort1 sortilin 1 JBrowse link 3 108,283,974 108,361,519 RGD:5509061
G Vax2 ventral anterior homeobox 2 JBrowse link 6 83,711,239 83,738,313 RGD:5509061
G Vsx2 visual system homeobox 2 JBrowse link 12 84,569,828 84,595,457 RGD:5509061
abnormal retinal ganglion layer morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alcam activated leukocyte cell adhesion molecule JBrowse link 16 52,248,996 52,453,081 RGD:5509061
G Aspa aspartoacylase JBrowse link 11 73,304,987 73,326,876 RGD:5509061
G Atoh7 atonal bHLH transcription factor 7 JBrowse link 10 63,099,785 63,101,280 RGD:5509061
G Atrx ATRX, chromatin remodeler JBrowse link X 105,797,615 105,929,372 RGD:5509061
G Barhl2 BarH like homeobox 2 JBrowse link 5 106,452,523 106,458,166 RGD:5509061
G Cdkn2a cyclin dependent kinase inhibitor 2A JBrowse link 4 89,274,473 89,294,619 RGD:5509061
G Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) JBrowse link 7 126,571,207 126,585,817 RGD:5509061
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated JBrowse link 1 139,176,649 139,379,316 RGD:5509061
G Crb2 crumbs family member 2 JBrowse link 2 37,776,225 37,799,103 RGD:5509061
G Dscam DS cell adhesion molecule JBrowse link 16 96,587,452 97,171,113 RGD:5509061
G Dscaml1 DS cell adhesion molecule like 1 JBrowse link 9 45,427,433 45,753,713 RGD:5509061
G Fkrp fukutin related protein JBrowse link 7 16,809,267 16,816,732 RGD:5509061
G Gas1 growth arrest specific 1 JBrowse link 13 60,174,405 60,177,535 RGD:5509061
G Gjd2 gap junction protein, delta 2 JBrowse link 2 114,009,601 114,014,378 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 JBrowse link 1 36,068,400 36,106,446 RGD:5509061
G Ins2 insulin II JBrowse link 7 142,678,656 142,679,726 RGD:5509061
G Large1 LARGE xylosyl- and glucuronyltransferase 1 JBrowse link 8 72,814,598 73,353,721 RGD:5509061
G Mt2 metallothionein 2 JBrowse link 8 94,172,618 94,173,567 RGD:5509061
G Neurod1 neurogenic differentiation 1 JBrowse link 2 79,452,637 79,456,636 RGD:5509061
G Neurod4 neurogenic differentiation 4 JBrowse link 10 130,268,152 130,280,254 RGD:5509061
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 10 42,561,963 42,583,590 RGD:5509061
G Pax6 paired box 6 JBrowse link 2 105,668,896 105,698,410 RGD:5509061
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:5509061
G Rest RE1-silencing transcription factor JBrowse link 5 77,265,494 77,286,432 RGD:5509061
G Rorb RAR-related orphan receptor beta JBrowse link 19 18,930,609 19,111,196 RGD:5509061
G Rpl24 ribosomal protein L24 JBrowse link 16 55,966,275 55,971,437 RGD:5509061
G Scrib scribbled planar cell polarity JBrowse link 15 76,047,162 76,069,784 RGD:5509061
G Six6 sine oculis-related homeobox 6 JBrowse link 12 72,939,882 72,944,899 RGD:5509061
G Slc1a3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 JBrowse link 15 8,634,124 8,710,807 RGD:5509061
G Sod1 superoxide dismutase 1, soluble JBrowse link 16 90,220,762 90,226,333 RGD:5509061
G Srsf1 serine and arginine-rich splicing factor 1 JBrowse link 11 88,046,499 88,053,757 RGD:5509061
G Tenm2 teneurin transmembrane protein 2 JBrowse link 11 36,006,656 37,237,053 RGD:5509061
G Tyr tyrosinase JBrowse link 7 87,424,771 87,493,512 RGD:5509061
abnormal retinal inner nuclear layer morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap4e1 adaptor-related protein complex AP-4, epsilon 1 JBrowse link 2 127,008,679 127,069,814 RGD:5509061
G Apoe apolipoprotein E JBrowse link 7 19,696,244 19,701,310 RGD:5509061
G Ascc2 activating signal cointegrator 1 complex subunit 2 JBrowse link 11 4,637,696 4,685,699 RGD:5509061
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 10 87,490,819 87,493,660 RGD:5509061
G Atrx ATRX, chromatin remodeler JBrowse link X 105,797,615 105,929,372 RGD:5509061
G Barhl2 BarH like homeobox 2 JBrowse link 5 106,452,523 106,458,166 RGD:5509061
G Casp3 caspase 3 JBrowse link 8 46,617,291 46,639,698 RGD:5509061
G Cdkn2a cyclin dependent kinase inhibitor 2A JBrowse link 4 89,274,473 89,294,619 RGD:5509061
G Clcc1 chloride channel CLIC-like 1 JBrowse link 3 108,653,878 108,678,840 RGD:5509061
G Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) JBrowse link 7 126,571,207 126,585,817 RGD:5509061
G Cp ceruloplasmin JBrowse link 3 19,956,933 20,009,750 RGD:5509061
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated JBrowse link 1 139,176,649 139,379,316 RGD:5509061
G Dab1 disabled 1 JBrowse link 4 103,619,500 104,744,844 RGD:5509061
G Dbn1 drebrin 1 JBrowse link 13 55,473,428 55,488,126 RGD:5509061
G Dscam DS cell adhesion molecule JBrowse link 16 96,587,452 97,171,113 RGD:5509061
G Dscaml1 DS cell adhesion molecule like 1 JBrowse link 9 45,427,433 45,753,713 RGD:5509061
G Dyrk1b dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b JBrowse link 7 28,179,447 28,197,910 RGD:5509061
G Eif2b4 eukaryotic translation initiation factor 2B, subunit 4 delta JBrowse link 5 31,187,558 31,193,139 RGD:5509061
G Eif2b5 eukaryotic translation initiation factor 2B, subunit 5 epsilon JBrowse link 16 20,498,795 20,509,325 RGD:5509061
G Epas1 endothelial PAS domain protein 1 JBrowse link 17 86,753,864 86,833,410 RGD:5509061
G Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6 JBrowse link 14 32,513,291 32,580,990 RGD:5509061
G Fkrp fukutin related protein JBrowse link 7 16,809,267 16,816,732 RGD:5509061
G Ftsj1 FtsJ RNA methyltransferase homolog 1 (E. coli) JBrowse link X 8,238,668 8,252,406 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Hibadh 3-hydroxyisobutyrate dehydrogenase JBrowse link 6 52,546,230 52,640,300 RGD:5509061
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 JBrowse link 5 112,342,983 112,378,424 RGD:5509061
G Large1 LARGE xylosyl- and glucuronyltransferase 1 JBrowse link 8 72,814,598 73,353,721 RGD:5509061
G Mdm1 transformed mouse 3T3 cell double minute 1 JBrowse link 10 118,141,540 118,168,999 RGD:5509061
G Ndp Norrie disease (pseudoglioma) (human) JBrowse link X 16,885,521 16,911,774 RGD:5509061
G Neurod1 neurogenic differentiation 1 JBrowse link 2 79,452,637 79,456,636 RGD:5509061
G Neurod4 neurogenic differentiation 4 JBrowse link 10 130,268,152 130,280,254 RGD:5509061
G Neurog2 neurogenin 2 JBrowse link 3 127,632,733 127,635,636 RGD:5509061
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 JBrowse link 4 149,467,569 149,485,210 RGD:5509061
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 10 42,561,963 42,583,590 RGD:5509061
G Parp1 poly (ADP-ribose) polymerase family, member 1 JBrowse link 1 180,568,891 180,600,999 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Pde6c phosphodiesterase 6C, cGMP specific, cone, alpha prime JBrowse link 19 38,132,781 38,183,955 RGD:5509061
G Plxna1 plexin A1 JBrowse link 6 89,316,313 89,362,613 RGD:5509061
G Plxna3 plexin A3 JBrowse link X 74,328,290 74,344,689 RGD:5509061
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 JBrowse link 5 121,130,533 121,191,397 RGD:5509061
G Rap1gap2 RAP1 GTPase activating protein 2 JBrowse link 11 74,383,356 74,610,915 RGD:5509061
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:5509061
G Rbl1 RB transcriptional corepressor like 1 JBrowse link 2 157,145,893 157,204,534 RGD:5509061
G Reln reelin JBrowse link 5 21,884,454 22,344,705 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Sema5a sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A JBrowse link 15 32,244,813 32,696,341 RGD:5509061
G Sema5b sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B JBrowse link 16 35,541,154 35,664,261 RGD:5509061
G Slc1a3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 JBrowse link 15 8,634,124 8,710,807 RGD:5509061
G Tgfb2 transforming growth factor, beta 2 JBrowse link 1 186,622,787 186,709,697 RGD:5509061
G Tgfb3 transforming growth factor, beta 3 JBrowse link 12 86,056,743 86,079,041 RGD:5509061
G Tgif2 TGFB-induced factor homeobox 2 JBrowse link 2 156,839,817 156,855,570 RGD:5509061
G Thra thyroid hormone receptor alpha JBrowse link 11 98,740,776 98,769,006 RGD:5509061
G Timm50 translocase of inner mitochondrial membrane 50 JBrowse link 7 28,305,516 28,312,046 RGD:5509061
G Tulp1 tubby like protein 1 JBrowse link 17 28,351,515 28,365,216 RGD:5509061
G Vps37d vacuolar protein sorting 37D JBrowse link 5 135,072,899 135,078,326 RGD:5509061
G Xpa xeroderma pigmentosum, complementation group A JBrowse link 4 46,175,220 46,196,344 RGD:5509061
abnormal retinal inner nuclear layer thickness term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dscam DS cell adhesion molecule JBrowse link 16 96,587,452 97,171,113 RGD:5509061
G Stk38 serine/threonine kinase 38 JBrowse link 17 28,970,880 29,008,010 RGD:5509061
G Stra6 stimulated by retinoic acid gene 6 JBrowse link 9 58,063,793 58,154,004 RGD:5509061
G Tgfbi transforming growth factor, beta induced JBrowse link 13 56,609,586 56,639,359 RGD:5509061
abnormal retinal inner plexiform layer morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agtpbp1 ATP/GTP binding protein 1 JBrowse link 13 59,449,534 59,557,370 RGD:5509061
G Cacna1f calcium channel, voltage-dependent, alpha 1F subunit JBrowse link X 7,607,103 7,635,196 RGD:5509061
G Cacna2d4 calcium channel, voltage-dependent, alpha 2/delta subunit 4 JBrowse link 6 119,236,524 119,352,407 RGD:5509061
G Chat choline acetyltransferase JBrowse link 14 32,408,203 32,465,909 RGD:5509061
G Clcc1 chloride channel CLIC-like 1 JBrowse link 3 108,653,878 108,678,840 RGD:5509061
G Dscam DS cell adhesion molecule JBrowse link 16 96,587,452 97,171,113 RGD:5509061
G Dscaml1 DS cell adhesion molecule like 1 JBrowse link 9 45,427,433 45,753,713 RGD:5509061
G E2f1 E2F transcription factor 1 JBrowse link 2 154,559,400 154,569,892 RGD:5509061
G Gphn gephyrin JBrowse link 12 78,217,325 78,684,772 RGD:5509061
G Irx6 Iroquois homeobox 6 JBrowse link 8 92,674,289 92,680,956 RGD:5509061
G Mpp5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) JBrowse link 12 78,748,882 78,840,714 RGD:5509061
G Ncam1 neural cell adhesion molecule 1 JBrowse link 9 49,502,129 49,799,393 RGD:5509061
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 10 42,561,963 42,583,590 RGD:5509061
G Plxna1 plexin A1 JBrowse link 6 89,316,313 89,362,613 RGD:5509061
G Plxna2 plexin A2 JBrowse link 1 194,619,791 194,816,869 RGD:5509061
G Plxna3 plexin A3 JBrowse link X 74,328,290 74,344,689 RGD:5509061
G Prdm13 PR domain containing 13 JBrowse link 4 21,675,865 21,685,963 RGD:5509061
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:5509061
G Rbl1 RB transcriptional corepressor like 1 JBrowse link 2 157,145,893 157,204,534 RGD:5509061
G Rest RE1-silencing transcription factor JBrowse link 5 77,265,494 77,286,432 RGD:5509061
G Rorb RAR-related orphan receptor beta JBrowse link 19 18,930,609 19,111,196 RGD:5509061
G Rpl24 ribosomal protein L24 JBrowse link 16 55,966,275 55,971,437 RGD:5509061
G Sema5a sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A JBrowse link 15 32,244,813 32,696,341 RGD:5509061
G Sema5b sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B JBrowse link 16 35,541,154 35,664,261 RGD:5509061
G Sema6a sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A JBrowse link 18 47,245,254 47,371,200 RGD:5509061
G Sptssb serine palmitoyltransferase, small subunit B JBrowse link 3 69,819,538 69,861,363 RGD:5509061
abnormal retinal nerve fiber layer morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Angpt1 angiopoietin 1 JBrowse link 15 42,424,667 42,676,977 RGD:5509061
G Angpt2 angiopoietin 2 JBrowse link 8 18,690,263 18,741,562 RGD:5509061
G Aspa aspartoacylase JBrowse link 11 73,304,987 73,326,876 RGD:5509061
G Atoh7 atonal bHLH transcription factor 7 JBrowse link 10 63,099,785 63,101,280 RGD:5509061
G Fasl Fas ligand (TNF superfamily, member 6) JBrowse link 1 161,780,691 161,788,495 RGD:5509061
G Grn granulin JBrowse link 11 102,430,294 102,436,809 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Gucy1a1 guanylate cyclase 1, soluble, alpha 1 JBrowse link 3 82,092,427 82,145,946 RGD:5509061
G Itga3 integrin alpha 3 JBrowse link 11 95,044,475 95,076,844 RGD:5509061
G Itga6 integrin alpha 6 JBrowse link 2 71,786,886 71,858,427 RGD:5509061
G Lrp5 low density lipoprotein receptor-related protein 5 JBrowse link 19 3,584,825 3,686,585 RGD:5509061
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 JBrowse link 7 44,549,616 44,553,968 RGD:5509061
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 10 42,561,963 42,583,590 RGD:5509061
G Opa1 OPA1, mitochondrial dynamin like GTPase JBrowse link 16 29,579,281 29,663,127 RGD:5509061
G Opa3 optic atrophy 3 JBrowse link 7 19,228,389 19,246,817 RGD:5509061
G Pax2 paired box 2 JBrowse link 19 44,746,601 44,838,269 RGD:5509061
G Pou4f2 POU domain, class 4, transcription factor 2 JBrowse link 8 78,433,009 78,436,647 RGD:5509061
G Pou4f3 POU domain, class 4, transcription factor 3 JBrowse link 18 42,394,597 42,396,093 RGD:5509061
G Sh3pxd2b SH3 and PX domains 2B JBrowse link 11 32,347,773 32,428,189 RGD:5509061
G Sod1 superoxide dismutase 1, soluble JBrowse link 16 90,220,762 90,226,333 RGD:5509061
G Tspan12 tetraspanin 12 JBrowse link 6 21,771,391 21,879,596 RGD:5509061
abnormal retinal outer nuclear layer morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aak1 AP2 associated kinase 1 JBrowse link 6
6
86,849,274
86,994,977
87,003,227
87,003,227
RGD:5509061
G Abcb5 ATP-binding cassette, sub-family B (MDR/TAP), member 5 JBrowse link 12 118,867,486 118,966,434 RGD:5509061
G Adipor1 adiponectin receptor 1 JBrowse link 1 134,415,378 134,433,351 RGD:5509061
G Agtpbp1 ATP/GTP binding protein 1 JBrowse link 13 59,449,534 59,557,370 RGD:5509061
G Alms1 ALMS1, centrosome and basal body associated JBrowse link 6 85,587,498 85,726,611 RGD:5509061
G Arl6 ADP-ribosylation factor-like 6 JBrowse link 16 59,612,949 59,639,409 RGD:5509061
G Cacna1f calcium channel, voltage-dependent, alpha 1F subunit JBrowse link X 7,607,103 7,635,196 RGD:5509061
G Cacna2d4 calcium channel, voltage-dependent, alpha 2/delta subunit 4 JBrowse link 6 119,236,524 119,352,407 RGD:5509061
G Cc2d2a coiled-coil and C2 domain containing 2A JBrowse link 5 43,662,374 43,740,975 RGD:5509061
G Cd46 CD46 antigen, complement regulatory protein JBrowse link 1 195,038,971 195,098,784 RGD:5509061
G Cep250 centrosomal protein 250 JBrowse link 2 155,956,285 155,998,900 RGD:5509061
G Chsy1 chondroitin sulfate synthase 1 JBrowse link 7 66,109,492 66,173,798 RGD:5509061
G Clcc1 chloride channel CLIC-like 1 JBrowse link 3 108,653,878 108,678,840 RGD:5509061
G Clcn2 chloride channel, voltage-sensitive 2 JBrowse link 16 20,702,435 20,717,746 RGD:5509061
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated JBrowse link 1 139,176,649 139,379,316 RGD:5509061
G Crb2 crumbs family member 2 JBrowse link 2 37,776,225 37,799,103 RGD:5509061
G Crx cone-rod homeobox JBrowse link 7 15,865,947 15,879,955 RGD:5509061
G Cry1 cryptochrome 1 (photolyase-like) JBrowse link 10 85,131,700 85,185,054 RGD:5509061
G Cry2 cryptochrome 2 (photolyase-like) JBrowse link 2 92,403,646 92,434,085 RGD:5509061
G Cx3cr1 chemokine (C-X3-C motif) receptor 1 JBrowse link 9 120,048,683 120,068,296 RGD:5509061
G Eif2b4 eukaryotic translation initiation factor 2B, subunit 4 delta JBrowse link 5 31,187,558 31,193,139 RGD:5509061
G Eif2b5 eukaryotic translation initiation factor 2B, subunit 5 epsilon JBrowse link 16 20,498,795 20,509,325 RGD:5509061
G Erc2 ELKS/RAB6-interacting/CAST family member 2 JBrowse link 14 27,622,275 28,478,537 RGD:5509061
G Ercc6 excision repair cross-complementing rodent repair deficiency, complementation group 6 JBrowse link 14 32,513,291 32,580,990 RGD:5509061
G Foxf2 forkhead box F2 JBrowse link 13 31,625,816 31,631,406 RGD:5509061
G G3bp1 GTPase activating protein (SH3 domain) binding protein 1 JBrowse link 11 55,469,657 55,500,888 RGD:5509061
G Irf3 interferon regulatory factor 3 JBrowse link 7 44,997,648 45,002,848 RGD:5509061
G Kansl1 KAT8 regulatory NSL complex subunit 1 JBrowse link 11 104,333,501 104,469,508 RGD:5509061
G Lmo7 LIM domain only 7 JBrowse link 14 101,729,928 101,934,708 RGD:5509061
G Lrp5 low density lipoprotein receptor-related protein 5 JBrowse link 19 3,584,825 3,686,585 RGD:5509061
G Map3k1 mitogen-activated protein kinase kinase kinase 1 JBrowse link 13 111,746,428 111,818,269 RGD:5509061
G Mcoln1 mucolipin 1 JBrowse link 8 3,500,519 3,515,232 RGD:5509061
G Mef2d myocyte enhancer factor 2D JBrowse link 3 88,141,941 88,172,091 RGD:5509061
G Mertk MER proto-oncogene tyrosine kinase JBrowse link 2 128,698,915 128,803,162 RGD:5509061
G Mfsd2a major facilitator superfamily domain containing 2A JBrowse link 4 122,946,850 122,961,194 RGD:5509061
G Mpp3 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) JBrowse link 11 101,999,652 102,027,045 RGD:5509061
G Mpp5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) JBrowse link 12 78,748,882 78,840,714 RGD:5509061
G Ndp Norrie disease (pseudoglioma) (human) JBrowse link X 16,885,521 16,911,774 RGD:5509061
G Neurod1 neurogenic differentiation 1 JBrowse link 2 79,452,637 79,456,636 RGD:5509061
G Neurod4 neurogenic differentiation 4 JBrowse link 10 130,268,152 130,280,254 RGD:5509061
G Neurog2 neurogenin 2 JBrowse link 3 127,632,733 127,635,636 RGD:5509061
G Nphp4 nephronophthisis 4 (juvenile) homolog (human) JBrowse link 4 152,476,706 152,563,184 RGD:5509061
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 10 42,561,963 42,583,590 RGD:5509061
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 JBrowse link 9 59,942,771 59,960,834 RGD:5509061
G Nrl neural retina leucine zipper gene JBrowse link 14 55,518,978 55,524,981 RGD:5509061
G Pank2 pantothenate kinase 2 JBrowse link 2 131,262,008 131,299,188 RGD:5509061
G Pcare photoreceptor cilium actin regulator JBrowse link 17 71,743,555 71,752,905 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 10,158,216 10,216,795 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Rspo1 R-spondin 1 JBrowse link 4 124,986,401 125,009,102 RGD:5509061
G Rxra retinoid X receptor alpha JBrowse link 2 27,676,445 27,763,319 RGD:5509061
G Stra6 stimulated by retinoic acid gene 6 JBrowse link 9 58,063,793 58,154,004 RGD:5509061
G Sun1 Sad1 and UNC84 domain containing 1 JBrowse link 5 139,200,564 139,249,839 RGD:5509061
G Tmem98 transmembrane protein 98 JBrowse link 11 80,810,366 80,822,033 RGD:5509061
G Trp53bp2 transformation related protein 53 binding protein 2 JBrowse link 1 182,409,167 182,462,436 RGD:5509061
G Ttll3 tubulin tyrosine ligase-like family, member 3 JBrowse link 6 113,389,260 113,414,592 RGD:5509061
G Uchl3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) JBrowse link 14 101,653,892 101,696,125 RGD:5509061
G Vegfa vascular endothelial growth factor A JBrowse link 17 46,016,993 46,032,377 RGD:5509061
G Vldlr very low density lipoprotein receptor JBrowse link 19 27,216,480 27,254,231 RGD:5509061
G Xpa xeroderma pigmentosum, complementation group A JBrowse link 4 46,175,220 46,196,344 RGD:5509061
abnormal retinal outer nuclear layer thickness term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crx cone-rod homeobox JBrowse link 7 15,865,947 15,879,955 RGD:5509061
G Rab28 RAB28, member RAS oncogene family JBrowse link 5 41,624,973 41,708,193 RGD:5509061
abnormal retinal outer plexiform layer morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 JBrowse link 11 72,028,717 72,042,460 RGD:5509061
G Cacna1f calcium channel, voltage-dependent, alpha 1F subunit JBrowse link X 7,607,103 7,635,196 RGD:5509061
G Cacna2d4 calcium channel, voltage-dependent, alpha 2/delta subunit 4 JBrowse link 6 119,236,524 119,352,407 RGD:5509061
G Clcc1 chloride channel CLIC-like 1 JBrowse link 3 108,653,878 108,678,840 RGD:5509061
G Crb2 crumbs family member 2 JBrowse link 2 37,776,225 37,799,103 RGD:5509061
G Crx cone-rod homeobox JBrowse link 7 15,865,947 15,879,955 RGD:5509061
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link 2 181,518,858 181,552,886 RGD:5509061
G Dscaml1 DS cell adhesion molecule like 1 JBrowse link 9 45,427,433 45,753,713 RGD:5509061
G Elovl4 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 JBrowse link 9 83,778,692 83,806,305 RGD:5509061
G Erc2 ELKS/RAB6-interacting/CAST family member 2 JBrowse link 14 27,622,275 28,478,537 RGD:5509061
G Irf3 interferon regulatory factor 3 JBrowse link 7 44,997,648 45,002,848 RGD:5509061
G Isl1 ISL1 transcription factor, LIM/homeodomain JBrowse link 13 116,298,270 116,309,688 RGD:5509061
G Lamb2 laminin, beta 2 JBrowse link 9 108,479,847 108,490,530 RGD:5509061
G Large1 LARGE xylosyl- and glucuronyltransferase 1 JBrowse link 8 72,814,598 73,353,721 RGD:5509061
G Lrp5 low density lipoprotein receptor-related protein 5 JBrowse link 19 3,584,825 3,686,585 RGD:5509061
G Map1b microtubule-associated protein 1B JBrowse link 13 99,421,464 99,516,602 RGD:5509061
G Mdm1 transformed mouse 3T3 cell double minute 1 JBrowse link 10 118,141,540 118,168,999 RGD:5509061
G Mef2d myocyte enhancer factor 2D JBrowse link 3 88,141,941 88,172,091 RGD:5509061
G Mpp3 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3) JBrowse link 11 101,999,652 102,027,045 RGD:5509061
G Ndp Norrie disease (pseudoglioma) (human) JBrowse link X 16,885,521 16,911,774 RGD:5509061
G Nphp4 nephronophthisis 4 (juvenile) homolog (human) JBrowse link 4 152,476,706 152,563,184 RGD:5509061
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 10 42,561,963 42,583,590 RGD:5509061
G Onecut1 one cut domain, family member 1 JBrowse link 9 74,861,921 74,889,648 RGD:5509061
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 JBrowse link 17 27,655,591 27,711,118 RGD:5509061
G Plxna1 plexin A1 JBrowse link 6 89,316,313 89,362,613 RGD:5509061
G Plxna3 plexin A3 JBrowse link X 74,328,290 74,344,689 RGD:5509061
G Pomt1 protein-O-mannosyltransferase 1 JBrowse link 2 32,236,590 32,255,005 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Ptf1a pancreas specific transcription factor, 1a JBrowse link 2 19,445,663 19,447,501 RGD:5509061
G Rgs11 regulator of G-protein signaling 11 JBrowse link 17 26,202,527 26,211,324 RGD:5509061
G Rgs7 regulator of G protein signaling 7 JBrowse link 1 175,059,076 175,492,862 RGD:5509061
G Rras2 related RAS viral (r-ras) oncogene 2 JBrowse link 7 114,046,782 114,117,781 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Sox11 SRY (sex determining region Y)-box 11 JBrowse link 12 27,334,268 27,342,718 RGD:5509061
G Sox4 SRY (sex determining region Y)-box 4 JBrowse link 13 28,948,919 28,953,699 RGD:5509061
G Sptssb serine palmitoyltransferase, small subunit B JBrowse link 3 69,819,538 69,861,363 RGD:5509061
G Syne2 spectrin repeat containing, nuclear envelope 2 JBrowse link 12 75,818,318 76,110,928 RGD:5509061
G Top2b topoisomerase (DNA) II beta JBrowse link 14 16,365,206 16,430,787 RGD:5509061
G Tulp1 tubby like protein 1 JBrowse link 17 28,351,515 28,365,216 RGD:5509061
G Vegfa vascular endothelial growth factor A JBrowse link 17 46,016,993 46,032,377 RGD:5509061
abnormal retinal photoreceptor layer morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agtpbp1 ATP/GTP binding protein 1 JBrowse link 13 59,449,534 59,557,370 RGD:5509061
G Bbs4 Bardet-Biedl syndrome 4 (human) JBrowse link 9 59,321,966 59,353,508 RGD:5509061
G Bmp4 bone morphogenetic protein 4 JBrowse link 14 46,383,525 46,390,669 RGD:5509061
G Ccdc66 coiled-coil domain containing 66 JBrowse link 14 27,481,090 27,508,510 RGD:5509061
G Cenpj centromere protein J JBrowse link 14 56,526,761 56,575,489 RGD:5509061
G Clcc1 chloride channel CLIC-like 1 JBrowse link 3 108,653,878 108,678,840 RGD:5509061
G Clcn2 chloride channel, voltage-sensitive 2 JBrowse link 16 20,702,435 20,717,746 RGD:5509061
G Cln8 CLN8 transmembrane ER and ERGIC protein JBrowse link 8 14,881,335 14,901,720 RGD:5509061
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated JBrowse link 1 139,176,649 139,379,316 RGD:5509061
G Crb2 crumbs family member 2 JBrowse link 2 37,776,225 37,799,103 RGD:5509061
G Crx cone-rod homeobox JBrowse link 7 15,865,947 15,879,955 RGD:5509061
G Cwc27 CWC27 spliceosome-associated protein JBrowse link 13 104,631,140 104,817,110 RGD:5509061
G Cx3cr1 chemokine (C-X3-C motif) receptor 1 JBrowse link 9 120,048,683 120,068,296 RGD:5509061
G Elovl4 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 JBrowse link 9 83,778,692 83,806,305 RGD:5509061
G Gnptab N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits JBrowse link 10 88,379,134 88,447,324 RGD:5509061
G Hkdc1 hexokinase domain containing 1 JBrowse link 10 62,383,137 62,423,711 RGD:5509061
G Inpp5e inositol polyphosphate-5-phosphatase E JBrowse link 2 26,396,249 26,409,244 RGD:5509061
G Lca5 Leber congenital amaurosis 5 (human) JBrowse link 9 83,391,355 83,442,994 RGD:5509061
G Lmo7 LIM domain only 7 JBrowse link 14 101,729,928 101,934,708 RGD:5509061
G Macf1 microtubule-actin crosslinking factor 1 JBrowse link 4 123,349,633 123,687,802 RGD:5509061
G Mertk MER proto-oncogene tyrosine kinase JBrowse link 2 128,698,915 128,803,162 RGD:5509061
G Mpp5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) JBrowse link 12 78,748,882 78,840,714 RGD:5509061
G Ndp Norrie disease (pseudoglioma) (human) JBrowse link X 16,885,521 16,911,774 RGD:5509061
G Neurod1 neurogenic differentiation 1 JBrowse link 2 79,452,637 79,456,636 RGD:5509061
G Neurod4 neurogenic differentiation 4 JBrowse link 10 130,268,152 130,280,254 RGD:5509061
G Neurog2 neurogenin 2 JBrowse link 3 127,632,733 127,635,636 RGD:5509061
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 10 42,561,963 42,583,590 RGD:5509061
G Pax6 paired box 6 JBrowse link 2 105,668,896 105,698,410 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Pde6g phosphodiesterase 6G, cGMP-specific, rod, gamma JBrowse link 11 120,447,607 120,453,500 RGD:5509061
G Pdgfb platelet derived growth factor, B polypeptide JBrowse link 15 79,995,865 80,024,614 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Rb1cc1 RB1-inducible coiled-coil 1 JBrowse link 1 6,214,634 6,276,375 RGD:5509061
G Rd3 retinal degeneration 3 JBrowse link 1 191,956,490 191,988,282 RGD:5509061
G Rdh13 retinol dehydrogenase 13 (all-trans and 9-cis) JBrowse link 7 4,425,665 4,471,280 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 10,158,216 10,216,795 RGD:5509061
G Rras2 related RAS viral (r-ras) oncogene 2 JBrowse link 7 114,046,782 114,117,781 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Sod2 superoxide dismutase 2, mitochondrial JBrowse link 17 13,007,839 13,018,119 RGD:5509061
G Syne2 spectrin repeat containing, nuclear envelope 2 JBrowse link 12 75,818,318 76,110,928 RGD:5509061
G Trp53bp2 transformation related protein 53 binding protein 2 JBrowse link 1 182,409,167 182,462,436 RGD:5509061
G Tub tubby bipartite transcription factor JBrowse link 7 109,010,880 109,034,459 RGD:5509061
G Ush2a usherin JBrowse link 1 188,262,838 188,965,497 RGD:5509061
abnormal retinal photoreceptor morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G 2610301B20Rik RIKEN cDNA 2610301B20 gene JBrowse link 4 10,874,044 10,899,425 RGD:5509061
G Abca4 ATP-binding cassette, sub-family A (ABC1), member 4 JBrowse link 3 122,043,891 122,180,070 RGD:5509061
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 JBrowse link 11 72,028,717 72,042,460 RGD:5509061
G Arl2bp ADP-ribosylation factor-like 2 binding protein JBrowse link 8 94,666,600 94,674,457 RGD:5509061
G Arl6 ADP-ribosylation factor-like 6 JBrowse link 16 59,612,949 59,639,409 RGD:5509061
G Atp1b2 ATPase, Na+/K+ transporting, beta 2 polypeptide JBrowse link 11 69,599,728 69,605,978 RGD:5509061
G Bbs1 Bardet-Biedl syndrome 1 (human) JBrowse link 19 4,886,878 4,906,653 RGD:5509061
G C1qtnf5 C1q and tumor necrosis factor related protein 5 JBrowse link 9 44,101,770 44,109,187 RGD:5509061
G Cd36 CD36 molecule JBrowse link 5 17,781,690 17,888,959 RGD:5509061
G Cd46 CD46 antigen, complement regulatory protein JBrowse link 1 195,038,971 195,098,784 RGD:5509061
G Cdkn1b cyclin-dependent kinase inhibitor 1B JBrowse link 6 134,920,401 134,925,525 RGD:5509061
G Cdkn2a cyclin dependent kinase inhibitor 2A JBrowse link 4 89,274,473 89,294,619 RGD:5509061
G Cep290 centrosomal protein 290 JBrowse link 10 100,487,548 100,575,671 RGD:5509061
G Cfh complement component factor h JBrowse link 1 140,085,855 140,183,411 RGD:5509061
G Cplx3 complexin 3 JBrowse link 9 57,599,992 57,606,281 RGD:5509061
G Cplx4 complexin 4 JBrowse link 18 65,955,722 65,970,178 RGD:5509061
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated JBrowse link 1 139,176,649 139,379,316 RGD:5509061
G Crx cone-rod homeobox JBrowse link 7 15,865,947 15,879,955 RGD:5509061
G Cx3cr1 chemokine (C-X3-C motif) receptor 1 JBrowse link 9 120,048,683 120,068,296 RGD:5509061
G Dicer1 dicer 1, ribonuclease type III JBrowse link 12 104,687,740 104,751,968 RGD:5509061
G Fam161a family with sequence similarity 161, member A JBrowse link 11 23,006,721 23,045,743 RGD:5509061
G Gnat2 guanine nucleotide binding protein, alpha transducing 2 JBrowse link 3 108,086,788 108,101,432 RGD:5509061
G Grk1 G protein-coupled receptor kinase 1 JBrowse link 8 13,405,081 13,421,951 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 JBrowse link 12 110,691,036 110,696,395 RGD:5509061
G Lamb2 laminin, beta 2 JBrowse link 9 108,479,847 108,490,530 RGD:5509061
G Lrat lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase) JBrowse link 3 82,892,582 82,903,974 RGD:5509061
G Man2b1 mannosidase 2, alpha B1 JBrowse link 8 85,082,730 85,098,739 RGD:5509061
G Mef2d myocyte enhancer factor 2D JBrowse link 3 88,141,941 88,172,091 RGD:5509061
G Mirc35hg microRNA cluster 35, host gene JBrowse link 6 30,158,640 30,174,125 RGD:5509061
G Mitf melanogenesis associated transcription factor JBrowse link 6 97,807,002 98,021,360 RGD:5509061
G Mpc1 mitochondrial pyruvate carrier 1 JBrowse link 17 8,283,787 8,297,667 RGD:5509061
G Mpp4 membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) JBrowse link 1 59,120,935 59,163,389 RGD:5509061
G Mpp5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) JBrowse link 12 78,748,882 78,840,714 RGD:5509061
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 JBrowse link 9 59,942,771 59,960,834 RGD:5509061
G Nrl neural retina leucine zipper gene JBrowse link 14 55,518,978 55,524,981 RGD:5509061
G Pdcl phosducin-like JBrowse link 2 37,350,074 37,359,820 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Pfdn5 prefoldin 5 JBrowse link 15 102,326,116 102,331,490 RGD:5509061
G Prkci protein kinase C, iota JBrowse link 3 30,995,742 31,052,740 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:5509061
G Rbl1 RB transcriptional corepressor like 1 JBrowse link 2 157,145,893 157,204,534 RGD:5509061
G Rdh8 retinol dehydrogenase 8 JBrowse link 9 20,818,494 20,828,058 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rp1 retinitis pigmentosa 1 (human) JBrowse link 1 4,115,673 4,409,266 RGD:5509061
G Rp2 retinitis pigmentosa 2 homolog JBrowse link X 20,364,481 20,405,653 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Sdccag8 serologically defined colon cancer antigen 8 JBrowse link 1 176,814,660 177,020,438 RGD:5509061
G Sirt1 sirtuin 1 JBrowse link 10 63,319,005 63,339,035 RGD:5509061
G Stra6 stimulated by retinoic acid gene 6 JBrowse link 9 58,063,793 58,154,004 RGD:5509061
G Tulp1 tubby like protein 1 JBrowse link 17 28,351,515 28,365,216 RGD:5509061
G Tyr tyrosinase JBrowse link 7 87,424,771 87,493,512 RGD:5509061
G Ush2a usherin JBrowse link 1 188,262,838 188,965,497 RGD:5509061
G Vldlr very low density lipoprotein receptor JBrowse link 19 27,216,480 27,254,231 RGD:5509061
G Whrn whirlin JBrowse link 4 63,414,908 63,496,083 RGD:5509061
abnormal retinal rod cell inner segment morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C1qtnf5 C1q and tumor necrosis factor related protein 5 JBrowse link 9 44,101,770 44,109,187 RGD:5509061
G Cln8 CLN8 transmembrane ER and ERGIC protein JBrowse link 8 14,881,335 14,901,720 RGD:5509061
G Pank2 pantothenate kinase 2 JBrowse link 2 131,262,008 131,299,188 RGD:5509061
G Rpe65 retinal pigment epithelium 65 JBrowse link 3 159,599,075 159,625,307 RGD:5509061
G Whrn whirlin JBrowse link 4 63,414,908 63,496,083 RGD:5509061
abnormal retinal rod cell morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agtpbp1 ATP/GTP binding protein 1 JBrowse link 13 59,449,534 59,557,370 RGD:5509061
G Atxn7 ataxin 7 JBrowse link 14 13,961,283 14,107,316 RGD:5509061
G Bsn bassoon JBrowse link 9 108,096,022 108,190,419 RGD:5509061
G Cabp4 calcium binding protein 4 JBrowse link 19 4,135,423 4,144,080 RGD:5509061
G Ccdc66 coiled-coil domain containing 66 JBrowse link 14 27,481,090 27,508,510 RGD:5509061
G Cnga3 cyclic nucleotide gated channel alpha 3 JBrowse link 1 37,218,241 37,263,384 RGD:5509061
G Cngb1 cyclic nucleotide gated channel beta 1 JBrowse link 8 95,239,043 95,306,585 RGD:5509061
G Egflam EGF-like, fibronectin type III and laminin G domains JBrowse link 15 7,206,120 7,398,744 RGD:5509061
G Elovl4 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 JBrowse link 9 83,778,692 83,806,305 RGD:5509061
G Erc2 ELKS/RAB6-interacting/CAST family member 2 JBrowse link 14 27,622,275 28,478,537 RGD:5509061
G Gja10 gap junction protein, alpha 10 JBrowse link 4 32,600,865 32,602,382 RGD:5509061
G Gnb3 guanine nucleotide binding protein (G protein), beta 3 JBrowse link 6 124,834,240 124,840,275 RGD:5509061
G Grk1 G protein-coupled receptor kinase 1 JBrowse link 8 13,405,081 13,421,951 RGD:5509061
G Gucy2e guanylate cyclase 2e JBrowse link 11 69,218,117 69,237,279 RGD:5509061
G Gucy2f guanylate cyclase 2f JBrowse link X 142,079,286 142,197,276 RGD:5509061
G Lamb2 laminin, beta 2 JBrowse link 9 108,479,847 108,490,530 RGD:5509061
G Mpp5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) JBrowse link 12 78,748,882 78,840,714 RGD:5509061
G Myo7a myosin VIIA JBrowse link 7 98,051,054 98,119,522 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Pde6d phosphodiesterase 6D, cGMP-specific, rod, delta JBrowse link 1 86,543,012 86,582,785 RGD:5509061
G Prom1 prominin 1 JBrowse link 5 43,993,621 44,102,047 RGD:5509061
G Reep6 receptor accessory protein 6 JBrowse link 10 80,329,997 80,336,441 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Spata7 spermatogenesis associated 7 JBrowse link 12 98,628,129 98,669,819 RGD:5509061
G Tlr4 toll-like receptor 4 JBrowse link 4 66,827,551 66,846,581 RGD:5509061
G Top2b topoisomerase (DNA) II beta JBrowse link 14 16,365,206 16,430,787 RGD:5509061
abnormal retinal rod cell outer segment morphology term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl3 ADP-ribosylation factor-like 3 JBrowse link 19 46,531,109 46,573,182 RGD:5509061
G Cabp4 calcium binding protein 4 JBrowse link 19 4,135,423 4,144,080 RGD:5509061
G Cln8 CLN8 transmembrane ER and ERGIC protein JBrowse link 8 14,881,335 14,901,720 RGD:5509061
G Cngb1 cyclic nucleotide gated channel beta 1 JBrowse link 8 95,239,043 95,306,585 RGD:5509061
G Crb2 crumbs family member 2 JBrowse link 2 37,776,225 37,799,103 RGD:5509061
G Crx cone-rod homeobox JBrowse link 7 15,865,947 15,879,955 RGD:5509061
G Elovl4 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 JBrowse link 9 83,778,692 83,806,305 RGD:5509061
G Fmr1 FMRP translational regulator 1 JBrowse link X 68,678,536 68,717,963 RGD:5509061
G Gnat1 guanine nucleotide binding protein, alpha transducing 1 JBrowse link 9 107,674,437 107,679,634 RGD:5509061
G Grk1 G protein-coupled receptor kinase 1 JBrowse link 8 13,405,081 13,421,951 RGD:5509061
G Gucy2e guanylate cyclase 2e JBrowse link 11 69,218,117 69,237,279 RGD:5509061
G Gucy2f guanylate cyclase 2f JBrowse link X 142,079,286 142,197,276 RGD:5509061
G Lrat lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase) JBrowse link 3 82,892,582 82,903,974 RGD:5509061
G Mef2d myocyte enhancer factor 2D JBrowse link 3 88,141,941 88,172,091 RGD:5509061
G Mfsd2a major facilitator superfamily domain containing 2A JBrowse link 4 122,946,850 122,961,194 RGD:5509061
G Msi1 musashi RNA-binding protein 1 JBrowse link 5 115,359,059 115,455,560 RGD:5509061
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 JBrowse link 4 149,467,569 149,485,210 RGD:5509061
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 JBrowse link 13 58,806,472 59,133,970 RGD:5509061
G Pank2 pantothenate kinase 2 JBrowse link 2 131,262,008 131,299,188 RGD:5509061
G Pdcl phosducin-like JBrowse link 2 37,350,074 37,359,820 RGD:5509061
G Pde6d phosphodiesterase 6D, cGMP-specific, rod, delta JBrowse link 1 86,543,012 86,582,785 RGD:5509061
G Pex1 peroxisomal biogenesis factor 1 JBrowse link 5 3,596,066 3,637,230 RGD:5509061
G Prcd photoreceptor disc component JBrowse link 11 116,653,889 116,668,389 RGD:5509061
G Prom1 prominin 1 JBrowse link 5 43,993,621 44,102,047 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Rdh12 retinol dehydrogenase 12 JBrowse link 12 79,208,913 79,222,664 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rom1 rod outer segment membrane protein 1 JBrowse link 19 8,927,382 8,929,356 RGD:5509061
G Rpe65 retinal pigment epithelium 65 JBrowse link 3 159,599,075 159,625,307 RGD:5509061
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 10,158,216 10,216,795 RGD:5509061
G Sag S-antigen, retina and pineal gland (arrestin) JBrowse link 1 87,798,143 87,845,158 RGD:5509061
G Samd7 sterile alpha motif domain containing 7 JBrowse link 3 30,746,293 30,767,174 RGD:5509061
G Sema4a sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A JBrowse link 3 88,435,959 88,461,240 RGD:5509061
G Sod2 superoxide dismutase 2, mitochondrial JBrowse link 17 13,007,839 13,018,119 RGD:5509061
G Stra6 stimulated by retinoic acid gene 6 JBrowse link 9 58,063,793 58,154,004 RGD:5509061
G Top2b topoisomerase (DNA) II beta JBrowse link 14 16,365,206 16,430,787 RGD:5509061
absent photoreceptor inner segment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl6 ADP-ribosylation factor-like 6 JBrowse link 16 59,612,949 59,639,409 RGD:5509061
G Clcn7 chloride channel, voltage-sensitive 7 JBrowse link 17 25,133,378 25,162,103 RGD:5509061
G Crx cone-rod homeobox JBrowse link 7 15,865,947 15,879,955 RGD:5509061
G Macf1 microtubule-actin crosslinking factor 1 JBrowse link 4 123,349,633 123,687,802 RGD:5509061
G Mef2d myocyte enhancer factor 2D JBrowse link 3 88,141,941 88,172,091 RGD:5509061
G Mpp5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) JBrowse link 12 78,748,882 78,840,714 RGD:5509061
G Prkci protein kinase C, iota JBrowse link 3 30,995,742 31,052,740 RGD:5509061
G Rorb RAR-related orphan receptor beta JBrowse link 19 18,930,609 19,111,196 RGD:5509061
G Tulp1 tubby like protein 1 JBrowse link 17 28,351,515 28,365,216 RGD:5509061
absent photoreceptor outer segment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahi1 Abelson helper integration site 1 JBrowse link 10 20,952,232 21,080,429 RGD:5509061
G Arl3 ADP-ribosylation factor-like 3 JBrowse link 19 46,531,109 46,573,182 RGD:5509061
G Arl6 ADP-ribosylation factor-like 6 JBrowse link 16 59,612,949 59,639,409 RGD:5509061
G Clcn7 chloride channel, voltage-sensitive 7 JBrowse link 17 25,133,378 25,162,103 RGD:5509061
G Crx cone-rod homeobox JBrowse link 7 15,865,947 15,879,955 RGD:5509061
G Cry1 cryptochrome 1 (photolyase-like) JBrowse link 10 85,131,700 85,185,054 RGD:5509061
G Cry2 cryptochrome 2 (photolyase-like) JBrowse link 2 92,403,646 92,434,085 RGD:5509061
G Lpcat1 lysophosphatidylcholine acyltransferase 1 JBrowse link 13 73,467,231 73,516,420 RGD:5509061
G Macf1 microtubule-actin crosslinking factor 1 JBrowse link 4 123,349,633 123,687,802 RGD:5509061
G Mitf melanogenesis associated transcription factor JBrowse link 6 97,807,002 98,021,360 RGD:5509061
G Mpp5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) JBrowse link 12 78,748,882 78,840,714 RGD:5509061
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 10 42,561,963 42,583,590 RGD:5509061
G Oat ornithine aminotransferase JBrowse link 7 132,557,475 132,576,398 RGD:5509061
G Pde6a phosphodiesterase 6A, cGMP-specific, rod, alpha JBrowse link 18 61,220,474 61,289,750 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Prkci protein kinase C, iota JBrowse link 3 30,995,742 31,052,740 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rorb RAR-related orphan receptor beta JBrowse link 19 18,930,609 19,111,196 RGD:5509061
G Rpgrip1 retinitis pigmentosa GTPase regulator interacting protein 1 JBrowse link 14 52,104,241 52,161,339 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Sema4a sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A JBrowse link 3 88,435,959 88,461,240 RGD:5509061
G Tmem30a transmembrane protein 30A JBrowse link 9 79,768,941 79,793,430 RGD:5509061
G Tub tubby bipartite transcription factor JBrowse link 7 109,010,880 109,034,459 RGD:5509061
G Tulp1 tubby like protein 1 JBrowse link 17 28,351,515 28,365,216 RGD:5509061
absent retinal cone cells term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bsg basigin JBrowse link 10 79,704,358 79,711,979 RGD:5509061
G Mitf melanogenesis associated transcription factor JBrowse link 6 97,807,002 98,021,360 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Tmem30a transmembrane protein 30A JBrowse link 9 79,768,941 79,793,430 RGD:5509061
absent retinal ganglion cell term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atoh7 atonal bHLH transcription factor 7 JBrowse link 10 63,099,785 63,101,280 RGD:5509061
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:5509061
G Rbl2 RB transcriptional corepressor like 2 JBrowse link 8 91,070,057 91,123,844 RGD:5509061
G Sox11 SRY (sex determining region Y)-box 11 JBrowse link 12 27,334,268 27,342,718 RGD:5509061
G Sox4 SRY (sex determining region Y)-box 4 JBrowse link 13 28,948,919 28,953,699 RGD:5509061
absent retinal ganglion layer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atoh7 atonal bHLH transcription factor 7 JBrowse link 10 63,099,785 63,101,280 RGD:5509061
G Nrf1 nuclear respiratory factor 1 JBrowse link 6 30,047,985 30,153,458 RGD:5509061
G Sox11 SRY (sex determining region Y)-box 11 JBrowse link 12 27,334,268 27,342,718 RGD:5509061
G Sox4 SRY (sex determining region Y)-box 4 JBrowse link 13 28,948,919 28,953,699 RGD:5509061
G Tfap2a transcription factor AP-2, alpha JBrowse link 13 40,713,802 40,738,238 RGD:5509061
absent retinal inner plexiform layer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gdf11 growth differentiation factor 11 JBrowse link 10 128,880,524 128,891,718 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Ptf1a pancreas specific transcription factor, 1a JBrowse link 2 19,445,663 19,447,501 RGD:5509061
G Rarb retinoic acid receptor, beta JBrowse link 14 16,430,839 17,082,331 RGD:5509061
G Rarg retinoic acid receptor, gamma JBrowse link 15 102,234,938 102,257,522 RGD:5509061
G Sox11 SRY (sex determining region Y)-box 11 JBrowse link 12 27,334,268 27,342,718 RGD:5509061
G Sox4 SRY (sex determining region Y)-box 4 JBrowse link 13 28,948,919 28,953,699 RGD:5509061
absent retinal rod cells term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bsg basigin JBrowse link 10 79,704,358 79,711,979 RGD:5509061
G Cry1 cryptochrome 1 (photolyase-like) JBrowse link 10 85,131,700 85,185,054 RGD:5509061
G Cry2 cryptochrome 2 (photolyase-like) JBrowse link 2 92,403,646 92,434,085 RGD:5509061
G Mitf melanogenesis associated transcription factor JBrowse link 6 97,807,002 98,021,360 RGD:5509061
G Nrl neural retina leucine zipper gene JBrowse link 14 55,518,978 55,524,981 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Rd3 retinal degeneration 3 JBrowse link 1 191,956,490 191,988,282 RGD:5509061
G Rorb RAR-related orphan receptor beta JBrowse link 19 18,930,609 19,111,196 RGD:5509061
decreased photoreceptor outer segment number term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prom1 prominin 1 JBrowse link 5 43,993,621 44,102,047 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
decreased retinal cone cell number term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca4 ATP-binding cassette, sub-family A (ABC1), member 4 JBrowse link 3 122,043,891 122,180,070 RGD:5509061
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 JBrowse link 11 72,028,717 72,042,460 RGD:5509061
G C1qtnf5 C1q and tumor necrosis factor related protein 5 JBrowse link 9 44,101,770 44,109,187 RGD:5509061
G Cacna1f calcium channel, voltage-dependent, alpha 1F subunit JBrowse link X 7,607,103 7,635,196 RGD:5509061
G Clcc1 chloride channel CLIC-like 1 JBrowse link 3 108,653,878 108,678,840 RGD:5509061
G Cngb3 cyclic nucleotide gated channel beta 3 JBrowse link 4 19,280,850 19,510,623 RGD:5509061
G Crx cone-rod homeobox JBrowse link 7 15,865,947 15,879,955 RGD:5509061
G Cry1 cryptochrome 1 (photolyase-like) JBrowse link 10 85,131,700 85,185,054 RGD:5509061
G Cry2 cryptochrome 2 (photolyase-like) JBrowse link 2 92,403,646 92,434,085 RGD:5509061
G Cx3cr1 chemokine (C-X3-C motif) receptor 1 JBrowse link 9 120,048,683 120,068,296 RGD:5509061
G Epg5 ectopic P-granules autophagy protein 5 homolog (C. elegans) JBrowse link 18 77,938,409 78,037,325 RGD:5509061
G Guca1a guanylate cyclase activator 1a (retina) JBrowse link 17 47,394,557 47,413,514 RGD:5509061
G Gucy2e guanylate cyclase 2e JBrowse link 11 69,218,117 69,237,279 RGD:5509061
G Gucy2f guanylate cyclase 2f JBrowse link X 142,079,286 142,197,276 RGD:5509061
G Mef2d myocyte enhancer factor 2D JBrowse link 3 88,141,941 88,172,091 RGD:5509061
G Mir124a-1 microRNA 124a-1 JBrowse link 14 64,590,657 64,590,741 RGD:5509061
G Mir124a-1hg Mir124-1 host gene (non-protein coding) JBrowse link 14 64,588,115 64,593,961 RGD:5509061
G Mirc35hg microRNA cluster 35, host gene JBrowse link 6 30,158,640 30,174,125 RGD:5509061
G Myrf myelin regulatory factor JBrowse link 19 10,208,271 10,240,777 RGD:5509061
G Neurod1 neurogenic differentiation 1 JBrowse link 2 79,452,637 79,456,636 RGD:5509061
G Neurod4 neurogenic differentiation 4 JBrowse link 10 130,268,152 130,280,254 RGD:5509061
G Neurog2 neurogenin 2 JBrowse link 3 127,632,733 127,635,636 RGD:5509061
G Nrf1 nuclear respiratory factor 1 JBrowse link 6 30,047,985 30,153,458 RGD:5509061
G Nxnl1 nucleoredoxin-like 1 JBrowse link 8 71,560,555 71,566,649 RGD:5509061
G Nxnl2 nucleoredoxin-like 2 JBrowse link 13 51,168,706 51,175,191 RGD:5509061
G Otx2 orthodenticle homeobox 2 JBrowse link 14 48,656,781 48,667,644 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Pde6c phosphodiesterase 6C, cGMP specific, cone, alpha prime JBrowse link 19 38,132,781 38,183,955 RGD:5509061
G Pde6d phosphodiesterase 6D, cGMP-specific, rod, delta JBrowse link 1 86,543,012 86,582,785 RGD:5509061
G Ppt1 palmitoyl-protein thioesterase 1 JBrowse link 4 122,836,077 122,859,175 RGD:5509061
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:5509061
G Rbl2 RB transcriptional corepressor like 2 JBrowse link 8 91,070,057 91,123,844 RGD:5509061
G Rdh8 retinol dehydrogenase 8 JBrowse link 9 20,818,494 20,828,058 RGD:5509061
G Rp2 retinitis pigmentosa 2 homolog JBrowse link X 20,364,481 20,405,653 RGD:5509061
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 10,158,216 10,216,795 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Rtbdn retbindin JBrowse link 8 84,946,991 84,956,606 RGD:5509061
G Sdccag8 serologically defined colon cancer antigen 8 JBrowse link 1 176,814,660 177,020,438 RGD:5509061
G Stra6 stimulated by retinoic acid gene 6 JBrowse link 9 58,063,793 58,154,004 RGD:5509061
G Syne2 spectrin repeat containing, nuclear envelope 2 JBrowse link 12 75,818,318 76,110,928 RGD:5509061
decreased retinal ganglion cell number term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atoh7 atonal bHLH transcription factor 7 JBrowse link 10 63,099,785 63,101,280 RGD:5509061
G Barhl2 BarH like homeobox 2 JBrowse link 5 106,452,523 106,458,166 RGD:5509061
G Bcar3 breast cancer anti-estrogen resistance 3 JBrowse link 3 122,419,757 122,530,191 RGD:5509061
G E2f1 E2F transcription factor 1 JBrowse link 2 154,559,400 154,569,892 RGD:5509061
G E2f2 E2F transcription factor 2 JBrowse link 4 136,172,274 136,196,057 RGD:5509061
G E2f3 E2F transcription factor 3 JBrowse link 13 29,906,575 29,986,064 RGD:5509061
G Eomes eomesodermin JBrowse link 9 118,478,186 118,486,132 RGD:5509061
G Fasl Fas ligand (TNF superfamily, member 6) JBrowse link 1 161,780,691 161,788,495 RGD:5509061
G Foxg1 forkhead box G1 JBrowse link 12 49,382,883 49,386,867 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Gucy1a1 guanylate cyclase 1, soluble, alpha 1 JBrowse link 3 82,092,427 82,145,946 RGD:5509061
G Igfbp3 insulin-like growth factor binding protein 3 JBrowse link 11 7,206,086 7,215,498 RGD:5509061
G Isl1 ISL1 transcription factor, LIM/homeodomain JBrowse link 13 116,298,270 116,309,688 RGD:5509061
G Lrp2 low density lipoprotein receptor-related protein 2 JBrowse link 2 69,424,335 69,586,029 RGD:5509061
G Map3k12 mitogen-activated protein kinase kinase kinase 12 JBrowse link 15 102,497,647 102,517,004 RGD:5509061
G Mtnr1a melatonin receptor 1A JBrowse link 8 45,069,107 45,089,233 RGD:5509061
G Ncam1 neural cell adhesion molecule 1 JBrowse link 9 49,502,129 49,799,393 RGD:5509061
G Neurod1 neurogenic differentiation 1 JBrowse link 2 79,452,637 79,456,636 RGD:5509061
G Neurod4 neurogenic differentiation 4 JBrowse link 10 130,268,152 130,280,254 RGD:5509061
G Neurog2 neurogenin 2 JBrowse link 3 127,632,733 127,635,636 RGD:5509061
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 JBrowse link 7 44,549,616 44,553,968 RGD:5509061
G Nrf1 nuclear respiratory factor 1 JBrowse link 6 30,047,985 30,153,458 RGD:5509061
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 JBrowse link 13 58,806,472 59,133,970 RGD:5509061
G Opa1 OPA1, mitochondrial dynamin like GTPase JBrowse link 16 29,579,281 29,663,127 RGD:5509061
G Opa3 optic atrophy 3 JBrowse link 7 19,228,389 19,246,817 RGD:5509061
G Opn4 opsin 4 (melanopsin) JBrowse link 14 34,590,618 34,600,142 RGD:5509061
G Otx2 orthodenticle homeobox 2 JBrowse link 14 48,656,781 48,667,644 RGD:5509061
G Pax2 paired box 2 JBrowse link 19 44,746,601 44,838,269 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Pdgfrb platelet derived growth factor receptor, beta polypeptide JBrowse link 18 61,045,127 61,085,067 RGD:5509061
G Pomgnt1 protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase JBrowse link 4 116,150,498 116,159,844 RGD:5509061
G Pou4f2 POU domain, class 4, transcription factor 2 JBrowse link 8 78,433,009 78,436,647 RGD:5509061
G Pou4f3 POU domain, class 4, transcription factor 3 JBrowse link 18 42,394,597 42,396,093 RGD:5509061
G Prkcq protein kinase C, theta JBrowse link 2 11,171,905 11,301,226 RGD:5509061
G Pxdn peroxidasin JBrowse link 12 29,936,642 30,017,658 RGD:5509061
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:5509061
G Rbl1 RB transcriptional corepressor like 1 JBrowse link 2 157,145,893 157,204,534 RGD:5509061
G Rpl24 ribosomal protein L24 JBrowse link 16 55,966,275 55,971,437 RGD:5509061
G Serpinf1 serine (or cysteine) peptidase inhibitor, clade F, member 1 JBrowse link 11 75,410,029 75,422,623 RGD:5509061
G Slc1a1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 JBrowse link 19 28,835,135 28,913,960 RGD:5509061
G Slc1a3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 JBrowse link 15 8,634,124 8,710,807 RGD:5509061
G Smoc1 SPARC related modular calcium binding 1 JBrowse link 12 81,026,808 81,186,414 RGD:5509061
G Sod1 superoxide dismutase 1, soluble JBrowse link 16 90,220,762 90,226,333 RGD:5509061
G Sox11 SRY (sex determining region Y)-box 11 JBrowse link 12 27,334,268 27,342,718 RGD:5509061
G Sox4 SRY (sex determining region Y)-box 4 JBrowse link 13 28,948,919 28,953,699 RGD:5509061
G Srsf1 serine and arginine-rich splicing factor 1 JBrowse link 11 88,046,499 88,053,757 RGD:5509061
G Tgfbr2 transforming growth factor, beta receptor II JBrowse link 9 116,087,695 116,175,363 RGD:5509061
G Tmem30a transmembrane protein 30A JBrowse link 9 79,768,941 79,793,430 RGD:5509061
G Trim2 tripartite motif-containing 2 JBrowse link 3 84,160,439 84,308,352 RGD:5509061
decreased retinal photoreceptor cell number term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G 2610301B20Rik RIKEN cDNA 2610301B20 gene JBrowse link 4 10,874,044 10,899,425 RGD:5509061
G Abca4 ATP-binding cassette, sub-family A (ABC1), member 4 JBrowse link 3 122,043,891 122,180,070 RGD:5509061
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 JBrowse link 11 72,028,717 72,042,460 RGD:5509061
G Ascl1 achaete-scute family bHLH transcription factor 1 JBrowse link 10 87,490,819 87,493,660 RGD:5509061
G Atp8a2 ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 JBrowse link 14 59,647,531 60,086,914 RGD:5509061
G Atxn7 ataxin 7 JBrowse link 14 13,961,283 14,107,316 RGD:5509061
G Cacnb2 calcium channel, voltage-dependent, beta 2 subunit JBrowse link 2 14,603,861 14,988,811 RGD:5509061
G Chm choroidermia (RAB escort protein 1) JBrowse link X 113,040,592 113,185,539 RGD:5509061
G Clcn3 chloride channel, voltage-sensitive 3 JBrowse link 8 60,910,389 60,983,317 RGD:5509061
G Cln3 ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease) JBrowse link 7 126,571,207 126,585,817 RGD:5509061
G Cnga3 cyclic nucleotide gated channel alpha 3 JBrowse link 1 37,218,241 37,263,384 RGD:5509061
G Cngb1 cyclic nucleotide gated channel beta 1 JBrowse link 8 95,239,043 95,306,585 RGD:5509061
G Crb1 crumbs family member 1, photoreceptor morphogenesis associated JBrowse link 1 139,176,649 139,379,316 RGD:5509061
G Crb2 crumbs family member 2 JBrowse link 2 37,776,225 37,799,103 RGD:5509061
G Gdf11 growth differentiation factor 11 JBrowse link 10 128,880,524 128,891,718 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Guca1a guanylate cyclase activator 1a (retina) JBrowse link 17 47,394,557 47,413,514 RGD:5509061
G Ighm immunoglobulin heavy constant mu JBrowse link 12 113,418,826 113,422,730 RGD:5509061
G Itgb2 integrin beta 2 JBrowse link 10 77,530,329 77,565,708 RGD:5509061
G Lrat lecithin-retinol acyltransferase (phosphatidylcholine-retinol-O-acyltransferase) JBrowse link 3 82,892,582 82,903,974 RGD:5509061
G Mertk MER proto-oncogene tyrosine kinase JBrowse link 2 128,698,915 128,803,162 RGD:5509061
G Ndp Norrie disease (pseudoglioma) (human) JBrowse link X 16,885,521 16,911,774 RGD:5509061
G Neurod1 neurogenic differentiation 1 JBrowse link 2 79,452,637 79,456,636 RGD:5509061
G Neurod4 neurogenic differentiation 4 JBrowse link 10 130,268,152 130,280,254 RGD:5509061
G Neurog2 neurogenin 2 JBrowse link 3 127,632,733 127,635,636 RGD:5509061
G Oat ornithine aminotransferase JBrowse link 7 132,557,475 132,576,398 RGD:5509061
G Otx2 orthodenticle homeobox 2 JBrowse link 14 48,656,781 48,667,644 RGD:5509061
G Pde6a phosphodiesterase 6A, cGMP-specific, rod, alpha JBrowse link 18 61,220,474 61,289,750 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Pde6g phosphodiesterase 6G, cGMP-specific, rod, gamma JBrowse link 11 120,447,607 120,453,500 RGD:5509061
G Ppt1 palmitoyl-protein thioesterase 1 JBrowse link 4 122,836,077 122,859,175 RGD:5509061
G Prkcq protein kinase C, theta JBrowse link 2 11,171,905 11,301,226 RGD:5509061
G Prom1 prominin 1 JBrowse link 5 43,993,621 44,102,047 RGD:5509061
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 JBrowse link 6 124,720,707 124,738,709 RGD:5509061
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:5509061
G Rbl1 RB transcriptional corepressor like 1 JBrowse link 2 157,145,893 157,204,534 RGD:5509061
G Rdh8 retinol dehydrogenase 8 JBrowse link 9 20,818,494 20,828,058 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rlbp1 retinaldehyde binding protein 1 JBrowse link 7 79,374,865 79,392,250 RGD:5509061
G Rp1 retinitis pigmentosa 1 (human) JBrowse link 1 4,115,673 4,409,266 RGD:5509061
G Rp1l1 retinitis pigmentosa 1 homolog like 1 JBrowse link 14 63,992,431 64,033,506 RGD:5509061
G Rpe65 retinal pigment epithelium 65 JBrowse link 3 159,599,075 159,625,307 RGD:5509061
G Rxra retinoid X receptor alpha JBrowse link 2 27,676,445 27,763,319 RGD:5509061
G Sema4a sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A JBrowse link 3 88,435,959 88,461,240 RGD:5509061
G Slc4a7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 JBrowse link 14 14,703,011 14,799,944 RGD:5509061
G Trp53 transformation related protein 53 JBrowse link 11 69,580,348 69,591,873 RGD:5509061
G Tub tubby bipartite transcription factor JBrowse link 7 109,010,880 109,034,459 RGD:5509061
G Tulp1 tubby like protein 1 JBrowse link 17 28,351,515 28,365,216 RGD:5509061
G Tyr tyrosinase JBrowse link 7 87,424,771 87,493,512 RGD:5509061
G Vldlr very low density lipoprotein receptor JBrowse link 19 27,216,480 27,254,231 RGD:5509061
G Wdr81 WD repeat domain 81 JBrowse link 11 75,440,943 75,454,808 RGD:5509061
decreased retinal rod cell number term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atoh7 atonal bHLH transcription factor 7 JBrowse link 10 63,099,785 63,101,280 RGD:5509061
G Casp3 caspase 3 JBrowse link 8 46,617,291 46,639,698 RGD:5509061
G E2f2 E2F transcription factor 2 JBrowse link 4 136,172,274 136,196,057 RGD:5509061
G E2f3 E2F transcription factor 3 JBrowse link 13 29,906,575 29,986,064 RGD:5509061
G Kcnv2 potassium channel, subfamily V, member 2 JBrowse link 19 27,322,061 27,337,179 RGD:5509061
G Mef2d myocyte enhancer factor 2D JBrowse link 3 88,141,941 88,172,091 RGD:5509061
G Nrf1 nuclear respiratory factor 1 JBrowse link 6 30,047,985 30,153,458 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:5509061
G Rbl1 RB transcriptional corepressor like 1 JBrowse link 2 157,145,893 157,204,534 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rorb RAR-related orphan receptor beta JBrowse link 19 18,930,609 19,111,196 RGD:5509061
G Rtbdn retbindin JBrowse link 8 84,946,991 84,956,606 RGD:5509061
G Ubb ubiquitin B JBrowse link 11 62,551,171 62,553,213 RGD:5509061
G Vsx2 visual system homeobox 2 JBrowse link 12 84,569,828 84,595,457 RGD:5509061
disorganized photoreceptor inner segment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 JBrowse link 10 78,269,174 78,352,497 RGD:5509061
G Arl6 ADP-ribosylation factor-like 6 JBrowse link 16 59,612,949 59,639,409 RGD:5509061
G Bbs1 Bardet-Biedl syndrome 1 (human) JBrowse link 19 4,886,878 4,906,653 RGD:5509061
G Clcn2 chloride channel, voltage-sensitive 2 JBrowse link 16 20,702,435 20,717,746 RGD:5509061
G Oat ornithine aminotransferase JBrowse link 7 132,557,475 132,576,398 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rp1 retinitis pigmentosa 1 (human) JBrowse link 1 4,115,673 4,409,266 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
disorganized photoreceptor outer segment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 JBrowse link 10 78,269,174 78,352,497 RGD:5509061
G Arl2bp ADP-ribosylation factor-like 2 binding protein JBrowse link 8 94,666,600 94,674,457 RGD:5509061
G Atp8a2 ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 JBrowse link 14 59,647,531 60,086,914 RGD:5509061
G Bbs1 Bardet-Biedl syndrome 1 (human) JBrowse link 19 4,886,878 4,906,653 RGD:5509061
G Bbs2 Bardet-Biedl syndrome 2 (human) JBrowse link 8 94,067,952 94,099,369 RGD:5509061
G Bsg basigin JBrowse link 10 79,704,358 79,711,979 RGD:5509061
G Ccl2 chemokine (C-C motif) ligand 2 JBrowse link 11 82,035,577 82,037,452 RGD:5509061
G Cd36 CD36 molecule JBrowse link 5 17,781,690 17,888,959 RGD:5509061
G Cetn2 centrin 2 JBrowse link X 72,913,565 72,918,344 RGD:5509061
G Cetn3 centrin 3 JBrowse link 13 81,780,636 81,797,155 RGD:5509061
G Cfh complement component factor h JBrowse link 1 140,085,855 140,183,411 RGD:5509061
G Chsy1 chondroitin sulfate synthase 1 JBrowse link 7 66,109,492 66,173,798 RGD:5509061
G Clcn2 chloride channel, voltage-sensitive 2 JBrowse link 16 20,702,435 20,717,746 RGD:5509061
G Clcn3 chloride channel, voltage-sensitive 3 JBrowse link 8 60,910,389 60,983,317 RGD:5509061
G Cngb3 cyclic nucleotide gated channel beta 3 JBrowse link 4 19,280,850 19,510,623 RGD:5509061
G Cx3cr1 chemokine (C-X3-C motif) receptor 1 JBrowse link 9 120,048,683 120,068,296 RGD:5509061
G Fam161a family with sequence similarity 161, member A JBrowse link 11 23,006,721 23,045,743 RGD:5509061
G Gpx4 glutathione peroxidase 4 JBrowse link 10 80,047,166 80,056,439 RGD:5509061
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano JBrowse link 6 113,067,428 113,077,244 RGD:5509061
G Ift172 intraflagellar transport 172 JBrowse link 5 31,253,279 31,291,391 RGD:5509061
G Lca5 Leber congenital amaurosis 5 (human) JBrowse link 9 83,391,355 83,442,994 RGD:5509061
G Lztfl1 leucine zipper transcription factor-like 1 JBrowse link 9 123,694,404 123,717,625 RGD:5509061
G Mertk MER proto-oncogene tyrosine kinase JBrowse link 2 128,698,915 128,803,162 RGD:5509061
G Mfrp membrane frizzled-related protein JBrowse link 9 44,101,770 44,109,187 RGD:5509061
G Mfsd2a major facilitator superfamily domain containing 2A JBrowse link 4 122,946,850 122,961,194 RGD:5509061
G Opn1sw opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan) JBrowse link 6 29,376,671 29,380,513 RGD:5509061
G Pcare photoreceptor cilium actin regulator JBrowse link 17 71,743,555 71,752,905 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Pde6g phosphodiesterase 6G, cGMP-specific, rod, gamma JBrowse link 11 120,447,607 120,453,500 RGD:5509061
G Pfdn5 prefoldin 5 JBrowse link 15 102,326,116 102,331,490 RGD:5509061
G Prom1 prominin 1 JBrowse link 5 43,993,621 44,102,047 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 JBrowse link 6 124,720,707 124,738,709 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rom1 rod outer segment membrane protein 1 JBrowse link 19 8,927,382 8,929,356 RGD:5509061
G Rp1 retinitis pigmentosa 1 (human) JBrowse link 1 4,115,673 4,409,266 RGD:5509061
G Rp2 retinitis pigmentosa 2 homolog JBrowse link X 20,364,481 20,405,653 RGD:5509061
G Rpe65 retinal pigment epithelium 65 JBrowse link 3 159,599,075 159,625,307 RGD:5509061
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 10,158,216 10,216,795 RGD:5509061
G Rpgrip1 retinitis pigmentosa GTPase regulator interacting protein 1 JBrowse link 14 52,104,241 52,161,339 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Rxra retinoid X receptor alpha JBrowse link 2 27,676,445 27,763,319 RGD:5509061
disorganized retinal ganglion layer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnd1 cyclin D1 JBrowse link 7 144,929,931 144,939,937 RGD:5509061
G Dscam DS cell adhesion molecule JBrowse link 16 96,587,452 97,171,113 RGD:5509061
G Fzd5 frizzled class receptor 5 JBrowse link 1 64,730,558 64,737,750 RGD:5509061
G Itga3 integrin alpha 3 JBrowse link 11 95,044,475 95,076,844 RGD:5509061
G Itga6 integrin alpha 6 JBrowse link 2 71,786,886 71,858,427 RGD:5509061
G Large1 LARGE xylosyl- and glucuronyltransferase 1 JBrowse link 8 72,814,598 73,353,721 RGD:5509061
G Mpp5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) JBrowse link 12 78,748,882 78,840,714 RGD:5509061
G Ndp Norrie disease (pseudoglioma) (human) JBrowse link X 16,885,521 16,911,774 RGD:5509061
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 10 42,561,963 42,583,590 RGD:5509061
disorganized retinal inner nuclear layer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asic3 acid-sensing (proton-gated) ion channel 3 JBrowse link 5 24,413,451 24,417,840 RGD:5509061
G Dscam DS cell adhesion molecule JBrowse link 16 96,587,452 97,171,113 RGD:5509061
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 JBrowse link 2 109,917,647 110,014,257 RGD:5509061
G Lrp5 low density lipoprotein receptor-related protein 5 JBrowse link 19 3,584,825 3,686,585 RGD:5509061
G Map1b microtubule-associated protein 1B JBrowse link 13 99,421,464 99,516,602 RGD:5509061
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 JBrowse link 4 149,467,569 149,485,210 RGD:5509061
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 10 42,561,963 42,583,590 RGD:5509061
G Ptprf protein tyrosine phosphatase, receptor type, F JBrowse link 4 118,208,213 118,291,405 RGD:5509061
G Ptprs protein tyrosine phosphatase, receptor type, S JBrowse link 17 56,412,426 56,476,561 RGD:5509061
G Rb1 RB transcriptional corepressor 1 JBrowse link 14 73,192,858 73,325,951 RGD:5509061
G Rpl24 ribosomal protein L24 JBrowse link 16 55,966,275 55,971,437 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Sirt1 sirtuin 1 JBrowse link 10 63,319,005 63,339,035 RGD:5509061
G Sod1 superoxide dismutase 1, soluble JBrowse link 16 90,220,762 90,226,333 RGD:5509061
G Vldlr very low density lipoprotein receptor JBrowse link 19 27,216,480 27,254,231 RGD:5509061
disorganized retinal outer nuclear layer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asic3 acid-sensing (proton-gated) ion channel 3 JBrowse link 5 24,413,451 24,417,840 RGD:5509061
G C3ar1 complement component 3a receptor 1 JBrowse link 6 122,847,140 122,856,157 RGD:5509061
G C5ar1 complement component 5a receptor 1 JBrowse link 7 16,246,743 16,259,540 RGD:5509061
G Cd36 CD36 molecule JBrowse link 5 17,781,690 17,888,959 RGD:5509061
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 JBrowse link 2 109,917,647 110,014,257 RGD:5509061
G Lrp5 low density lipoprotein receptor-related protein 5 JBrowse link 19 3,584,825 3,686,585 RGD:5509061
G Map1b microtubule-associated protein 1B JBrowse link 13 99,421,464 99,516,602 RGD:5509061
G Mfsd2a major facilitator superfamily domain containing 2A JBrowse link 4 122,946,850 122,961,194 RGD:5509061
G Mpp5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) JBrowse link 12 78,748,882 78,840,714 RGD:5509061
G Neurod1 neurogenic differentiation 1 JBrowse link 2 79,452,637 79,456,636 RGD:5509061
G Neurod4 neurogenic differentiation 4 JBrowse link 10 130,268,152 130,280,254 RGD:5509061
G Neurog2 neurogenin 2 JBrowse link 3 127,632,733 127,635,636 RGD:5509061
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 JBrowse link 10 42,561,963 42,583,590 RGD:5509061
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 JBrowse link 9 59,942,771 59,960,834 RGD:5509061
G Onecut1 one cut domain, family member 1 JBrowse link 9 74,861,921 74,889,648 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Rb1cc1 RB1-inducible coiled-coil 1 JBrowse link 1 6,214,634 6,276,375 RGD:5509061
G Rho rhodopsin JBrowse link 6 115,926,754 115,940,038 RGD:5509061
G Rpl24 ribosomal protein L24 JBrowse link 16 55,966,275 55,971,437 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
G Sirt1 sirtuin 1 JBrowse link 10 63,319,005 63,339,035 RGD:5509061
G Sod1 superoxide dismutase 1, soluble JBrowse link 16 90,220,762 90,226,333 RGD:5509061
disorganized retinal outer plexiform layer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1f calcium channel, voltage-dependent, alpha 1F subunit JBrowse link X 7,607,103 7,635,196 RGD:5509061
G Cacnb2 calcium channel, voltage-dependent, beta 2 subunit JBrowse link 2 14,603,861 14,988,811 RGD:5509061
G Cplx3 complexin 3 JBrowse link 9 57,599,992 57,606,281 RGD:5509061
G Cplx4 complexin 4 JBrowse link 18 65,955,722 65,970,178 RGD:5509061
G Gja10 gap junction protein, alpha 10 JBrowse link 4 32,600,865 32,602,382 RGD:5509061
G Large1 LARGE xylosyl- and glucuronyltransferase 1 JBrowse link 8 72,814,598 73,353,721 RGD:5509061
G Lrp5 low density lipoprotein receptor-related protein 5 JBrowse link 19 3,584,825 3,686,585 RGD:5509061
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide JBrowse link 5 108,388,373 108,431,743 RGD:5509061
G Rorb RAR-related orphan receptor beta JBrowse link 19 18,930,609 19,111,196 RGD:5509061
G Rs1 retinoschisis (X-linked, juvenile) 1 (human) JBrowse link X 160,765,819 160,799,663 RGD:5509061
increased retinal cone cell number term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atoh7 atonal bHLH transcription factor 7 JBrowse link 10 63,099,785 63,101,280 RGD:5509061
G Nrl neural retina leucine zipper gene JBrowse link 14 55,518,978 55,524,981 RGD:5509061
G Prph2 peripherin 2 JBrowse link 17 46,910,478 46,924,933 RGD:5509061
G Rorb RAR-related orphan receptor beta