Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal cornea epithelium morphology
go back to main search page
Accession:MP:0006000 term browser browse the term
Definition:any structural anomaly of the smooth stratified squamous epithelium that covers the outer surface of the cornea
Synonyms:exact_synonym: abnormal corneal epithelium morphology



show annotations for term's descendants           Sort by:
abnormal cornea epithelium morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb5 ATP-binding cassette, sub-family B member 5 IAGP MGI PMID:25030174 NCBI chr12:118,831,221...118,930,169
Ensembl chr12:118,831,559...118,930,156
JBrowse link
G Ace2 angiotensin converting enzyme 2 IAGP MGI PMID:32725927 NCBI chr  X:162,922,338...162,971,414
Ensembl chr  X:162,922,328...162,971,416
JBrowse link
G Adam17 a disintegrin and metallopeptidase domain 17 IAGP MGI PMID:20194968 NCBI chr12:21,373,510...21,423,633
Ensembl chr12:21,373,510...21,423,633
JBrowse link
G Adcyap1 adenylate cyclase activating polypeptide 1 IAGP MGI PMID:27345595 NCBI chr17:93,506,448...93,513,967
Ensembl chr17:93,506,445...93,513,965
JBrowse link
G Aire autoimmune regulator IAGP MGI PMID:20696775 NCBI chr10:77,865,856...77,879,444
Ensembl chr10:77,865,856...77,879,444
JBrowse link
G Aqp5 aquaporin 5 IAGP MGI PMID:33013441 NCBI chr15:99,488,909...99,492,710
Ensembl chr15:99,488,663...99,492,710
JBrowse link
G Arsb arylsulfatase B IAGP MGI PMID:12904606 NCBI chr13:93,908,187...94,079,524
Ensembl chr13:93,908,138...94,079,524
JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase IAGP MGI PMID:26333994 NCBI chr 3:88,857,721...88,986,682
Ensembl chr 3:88,857,929...88,986,682
JBrowse link
G Awat2 acyl-CoA wax alcohol acyltransferase 2 IAGP MGI PMID:32851726 NCBI chr  X:99,445,827...99,537,885
Ensembl chr  X:99,445,827...99,486,323
JBrowse link
G Col18a1 collagen, type XVIII, alpha 1 IAGP MGI PMID:12766032 NCBI chr10:76,888,013...77,002,351
Ensembl chr10:76,888,012...77,002,382
JBrowse link
G Col8a2 collagen, type VIII, alpha 2 IAGP MGI PMID:19578028 NCBI chr 4:126,180,613...126,208,123
Ensembl chr 4:126,180,586...126,208,123
JBrowse link
G Ctnnb1 catenin beta 1 IAGP MGI PMID:11585809 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Dkk2 dickkopf WNT signaling pathway inhibitor 2 IAGP MGI PMID:16672341 NCBI chr 3:131,791,027...131,886,065
Ensembl chr 3:131,791,053...131,886,065
JBrowse link
G Dstn destrin IAGP MGI PMID:8603845 PMID:12700171 PMID:17051153 NCBI chr 2:143,757,251...143,785,244
Ensembl chr 2:143,757,240...143,785,244
JBrowse link
G Eda ectodysplasin-A IAGP MGI PMID:15972955 NCBI chr  X:99,019,212...99,444,366
Ensembl chr  X:99,019,212...99,444,368
JBrowse link
G Foxc1 forkhead box C1 IAGP MGI PMID:10395790 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459
JBrowse link
G Foxe3 forkhead box E3 IAGP MGI PMID:109409 NCBI chr 4:114,781,640...114,783,264
Ensembl chr 4:114,782,344...114,783,210
JBrowse link
G Grip1 glutamate receptor interacting protein 1 IAGP MGI PMID:10974668 NCBI chr10:119,289,810...119,923,172
Ensembl chr10:119,289,735...119,923,166
JBrowse link
G Gsdma3 gasdermin A3 IAGP MGI PMID:9434940 NCBI chr11:98,517,175...98,529,627
Ensembl chr11:98,517,186...98,529,052
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:23293291 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,055,336
JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:27483349 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
JBrowse link
G Il1r1 interleukin 1 receptor, type I IAGP MGI PMID:20696775 NCBI chr 1:40,261,651...40,355,361
Ensembl chr 1:40,264,240...40,356,417
JBrowse link
G Inhbb inhibin beta-B IAGP MGI PMID:8125256 NCBI chr 1:119,343,193...119,349,978
Ensembl chr 1:119,343,195...119,349,978
JBrowse link
G Itga9 integrin alpha 9 IAGP MGI PMID:18633440 NCBI chr 9:118,435,777...118,730,071
Ensembl chr 9:118,435,758...118,730,071
JBrowse link
G Klf4 Kruppel-like transcription factor 4 (gut) IAGP MGI PMID:17060454 PMID:21600198 NCBI chr 4:55,527,137...55,536,984
Ensembl chr 4:55,527,143...55,532,466
JBrowse link
G Klf5 Kruppel-like transcription factor 5 IAGP MGI PMID:21600198 NCBI chr14:99,536,127...99,550,848
Ensembl chr14:99,536,127...99,552,472
JBrowse link
G Klhl20 kelch-like 20 IAGP MGI PMID:22511632 NCBI chr 1:160,915,945...160,959,078
Ensembl chr 1:160,915,945...160,959,081
JBrowse link
G Krt12 keratin 12 IAGP MGI PMID:8977471 PMID:26758872 NCBI chr11:99,306,490...99,313,419
Ensembl chr11:99,306,492...99,313,085
JBrowse link
G Krt4 keratin 4 IAGP MGI PMID:9727004 NCBI chr15:101,826,970...101,833,170
Ensembl chr15:101,826,970...101,833,170
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 IAGP MGI PMID:18424556 NCBI chr 2:109,747,919...109,844,602
Ensembl chr 2:109,747,992...109,844,602
JBrowse link
G Limk2 LIM domain kinase 2 IAGP MGI PMID:23071748 NCBI chr11:3,293,297...3,359,238
Ensembl chr11:3,294,256...3,359,189
JBrowse link
G Nrtn neurturin IAGP MGI PMID:14507865 NCBI chr17:57,058,323...57,064,548
Ensembl chr17:57,058,325...57,064,530
JBrowse link
G Pax6 paired box 6 IAGP MGI PMID:4972360 PMID:12692153 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709
JBrowse link
G Plg plasminogen IAGP MGI PMID:9473227 NCBI chr17:12,597,496...12,638,271
Ensembl chr17:12,597,495...12,638,272
JBrowse link
G Pltp phospholipid transfer protein IAGP MGI PMID:21514421 NCBI chr 2:164,681,441...164,699,564
Ensembl chr 2:164,681,438...164,699,631
JBrowse link
G Psen1 presenilin 1 IAGP MGI PMID:15128703 NCBI chr12:83,734,926...83,781,869
Ensembl chr12:83,734,926...83,781,973
JBrowse link
G Psen2 presenilin 2 IAGP MGI PMID:15128703 NCBI chr 1:180,054,569...180,091,030
Ensembl chr 1:180,054,569...180,091,003
JBrowse link
G Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) IAGP MGI PMID:20713516 NCBI chr19:5,686,993...5,698,162
Ensembl chr19:5,687,511...5,698,158
JBrowse link
G Scrib scribbled planar cell polarity IAGP MGI PMID:24095903 NCBI chr15:75,919,011...75,941,633
Ensembl chr15:75,919,007...75,941,633
JBrowse link
G Slc4a11 solute carrier family 4, sodium bicarbonate transporter-like, member 11 IAGP MGI PMID:19586905 PMID:20185830 NCBI chr 2:130,526,027...130,539,439
Ensembl chr 2:130,526,033...130,539,439
JBrowse link
G Sod1 superoxide dismutase 1, soluble IAGP MGI PMID:25036096 NCBI chr16:90,017,650...90,023,221
Ensembl chr16:90,017,642...90,023,217
JBrowse link
G Tfap2b transcription factor AP-2 beta IAGP MGI PMID:27483349 NCBI chr 1:19,279,132...19,309,071
Ensembl chr 1:19,279,138...19,308,800
JBrowse link
G Thbs1 thrombospondin 1 IAGP MGI PMID:19700744 NCBI chr 2:117,942,357...117,957,614
Ensembl chr 2:117,942,357...117,957,614
JBrowse link
G Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a IAGP MGI PMID:20713516 NCBI chr 6:125,326,686...125,339,446
Ensembl chr 6:125,326,325...125,339,447
JBrowse link
G Trp63 transformation related protein 63 IAGP MGI PMID:16107615 NCBI chr16:25,502,513...25,710,842
Ensembl chr16:25,502,513...25,710,852
JBrowse link
absent cornea epithelium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frem1 Fras1 related extracellular matrix protein 1 IAGP MGI PMID:21507892 NCBI chr 4:82,816,157...82,970,743
Ensembl chr 4:82,816,164...82,970,576
JBrowse link
G Plg plasminogen IAGP MGI PMID:9473227 NCBI chr17:12,597,496...12,638,271
Ensembl chr17:12,597,495...12,638,272
JBrowse link
cornea epithelium hyperplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC, WNT signaling pathway regulator IAGP MGI PMID:17002498 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605
JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 IAGP MGI PMID:16847346 NCBI chr 7:112,777,820...112,913,333
Ensembl chr 7:112,806,672...112,913,333
JBrowse link
G Dkk2 dickkopf WNT signaling pathway inhibitor 2 IAGP MGI PMID:16672341 NCBI chr 3:131,791,027...131,886,065
Ensembl chr 3:131,791,053...131,886,065
JBrowse link
G Dstn destrin IAGP MGI PMID:11182022 PMID:12700171 NCBI chr 2:143,757,251...143,785,244
Ensembl chr 2:143,757,240...143,785,244
JBrowse link
G Klhl20 kelch-like 20 IAGP MGI PMID:22511632 NCBI chr 1:160,915,945...160,959,078
Ensembl chr 1:160,915,945...160,959,081
JBrowse link
G Krt4 keratin 4 IAGP MGI PMID:9727004 NCBI chr15:101,826,970...101,833,170
Ensembl chr15:101,826,970...101,833,170
JBrowse link
cornea epithelium hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb5 ATP-binding cassette, sub-family B member 5 IAGP MGI PMID:25030174 NCBI chr12:118,831,221...118,930,169
Ensembl chr12:118,831,559...118,930,156
JBrowse link
G Bnc1 basonuclin zinc finger protein 1 IAGP MGI PMID:17971852 NCBI chr 7:81,616,401...81,642,047
Ensembl chr 7:81,616,401...81,642,055
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 IAGP MGI PMID:18424556 NCBI chr 2:109,747,919...109,844,602
Ensembl chr 2:109,747,992...109,844,602
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IAGP MGI PMID:18436818 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467
JBrowse link
decreased cornea epithelium thickness term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsb arylsulfatase B IAGP MGI PMID:12904606 NCBI chr13:93,908,187...94,079,524
Ensembl chr13:93,908,138...94,079,524
JBrowse link
G Bnc1 basonuclin zinc finger protein 1 IAGP MGI PMID:17971852 NCBI chr 7:81,616,401...81,642,047
Ensembl chr 7:81,616,401...81,642,055
JBrowse link
G Foxe3 forkhead box E3 IAGP MGI PMID:16199865 NCBI chr 4:114,781,640...114,783,264
Ensembl chr 4:114,782,344...114,783,210
JBrowse link
G H2az2 H2A.Z histone variant 2 IAGP MGI PMID:27483349 NCBI chr11:6,377,226...6,394,511
Ensembl chr11:6,377,229...6,394,443
JBrowse link
G Itga9 integrin alpha 9 IAGP MGI PMID:18633440 NCBI chr 9:118,435,777...118,730,071
Ensembl chr 9:118,435,758...118,730,071
JBrowse link
G Klf4 Kruppel-like transcription factor 4 (gut) IAGP MGI PMID:17060454 NCBI chr 4:55,527,137...55,536,984
Ensembl chr 4:55,527,143...55,532,466
JBrowse link
G Klf5 Kruppel-like transcription factor 5 IAGP MGI PMID:21600198 NCBI chr14:99,536,127...99,550,848
Ensembl chr14:99,536,127...99,552,472
JBrowse link
G Krt12 keratin 12 IAGP MGI PMID:8977471 NCBI chr11:99,306,490...99,313,419
Ensembl chr11:99,306,492...99,313,085
JBrowse link
G Krt14 keratin 14 IAGP MGI PMID:7539810 NCBI chr11:100,093,988...100,098,336
Ensembl chr11:100,093,988...100,098,374
JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 IAGP MGI PMID:18424556 NCBI chr 2:109,747,919...109,844,602
Ensembl chr 2:109,747,992...109,844,602
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta IAGP MGI PMID:20568247 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620
JBrowse link
G Msx2 msh homeobox 2 IAGP MGI PMID:22503753 NCBI chr13:53,620,917...53,626,816
Ensembl chr13:53,620,920...53,627,110
JBrowse link
G Pax6 paired box 6 IAGP MGI PMID:12692153 PMID:12714618 PMID:17051153 NCBI chr 2:105,499,241...105,528,755
Ensembl chr 2:105,499,245...105,527,709
JBrowse link
G Pxdn peroxidasin IAGP MGI PMID:24895407 NCBI chr12:29,986,641...30,067,657
Ensembl chr12:29,987,607...30,067,657
JBrowse link
G Tfap2b transcription factor AP-2 beta IAGP MGI PMID:27483349 NCBI chr 1:19,279,132...19,309,071
Ensembl chr 1:19,279,138...19,308,800
JBrowse link
disorganized cornea epithelium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsb arylsulfatase B IAGP MGI PMID:12904606 NCBI chr13:93,908,187...94,079,524
Ensembl chr13:93,908,138...94,079,524
JBrowse link
G Chuk conserved helix-loop-helix ubiquitous kinase IAGP MGI PMID:11053261 NCBI chr19:44,061,773...44,095,940
Ensembl chr19:44,061,774...44,095,919
JBrowse link
G Gsdma3 gasdermin A3 IAGP MGI PMID:9434940 NCBI chr11:98,517,175...98,529,627
Ensembl chr11:98,517,186...98,529,052
JBrowse link
G Krt12 keratin 12 IAGP MGI PMID:26758872 NCBI chr11:99,306,490...99,313,419
Ensembl chr11:99,306,492...99,313,085
JBrowse link
G Pltp phospholipid transfer protein IAGP MGI PMID:21514421 NCBI chr 2:164,681,441...164,699,564
Ensembl chr 2:164,681,438...164,699,631
JBrowse link
increased cornea epithelium thickness term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dstn destrin IAGP MGI PMID:8603845 NCBI chr 2:143,757,251...143,785,244
Ensembl chr 2:143,757,240...143,785,244
JBrowse link
G Foxc1 forkhead box C1 IAGP MGI PMID:10395790 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459
JBrowse link
G Krt12 keratin 12 IAGP MGI PMID:26758872 NCBI chr11:99,306,490...99,313,419
Ensembl chr11:99,306,492...99,313,085
JBrowse link
G Krt4 keratin 4 IAGP MGI PMID:9727004 NCBI chr15:101,826,970...101,833,170
Ensembl chr15:101,826,970...101,833,170
JBrowse link
G Nrtn neurturin IAGP MGI PMID:14507865 NCBI chr17:57,058,323...57,064,548
Ensembl chr17:57,058,325...57,064,530
JBrowse link
G Pitx2 paired-like homeodomain transcription factor 2 IAGP MGI PMID:10498698 NCBI chr 3:128,993,527...129,013,243
Ensembl chr 3:128,993,527...129,013,240
JBrowse link
G Pltp phospholipid transfer protein IAGP MGI PMID:21514421 NCBI chr 2:164,681,441...164,699,564
Ensembl chr 2:164,681,438...164,699,631
JBrowse link
G Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 IAGP MGI PMID:38869368 NCBI chr 1:97,633,768...97,698,133
Ensembl chr 1:97,633,773...97,698,136
JBrowse link
G Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) IAGP MGI PMID:20713516 NCBI chr19:5,686,993...5,698,162
Ensembl chr19:5,687,511...5,698,158
JBrowse link
G Slc4a11 solute carrier family 4, sodium bicarbonate transporter-like, member 11 IAGP MGI PMID:20185830 NCBI chr 2:130,526,027...130,539,439
Ensembl chr 2:130,526,033...130,539,439
JBrowse link
G Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a IAGP MGI PMID:20713516 NCBI chr 6:125,326,686...125,339,446
Ensembl chr 6:125,326,325...125,339,447
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17090
    vision/eye phenotype 3190
      abnormal eye morphology 3031
        abnormal ocular surface morphology 94
          abnormal cornea epithelium morphology 57
            abnormal cornea epithelium thickness + 25
            absent cornea epithelium 2
            cornea epithelium hyperplasia 6
            cornea epithelium hypoplasia 4
            disorganized cornea epithelium 5
Path 2
Term Annotations click to browse term
  mammalian phenotype 17090
    vision/eye phenotype 3190
      abnormal eye morphology 3031
        abnormal anterior eye segment morphology 1185
          abnormal cornea morphology 401
            abnormal cornea epithelium morphology 57
              abnormal cornea epithelium thickness + 25
              absent cornea epithelium 2
              cornea epithelium hyperplasia 6
              cornea epithelium hypoplasia 4
              disorganized cornea epithelium 5
paths to the root