Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal choroid pigmentation
go back to main search page
Accession:MP:0005100 term browser browse the term
Definition:anomalous coloring of the thin, highly vascularized membrane covering most of the posterior of the eye between the retina and the sclera
Synonyms:exact_synonym: abnormal uveal pigmentation



show annotations for term's descendants           Sort by:
abnormal choroid pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G a nonagouti IAGP MGI PMID:12548288 NCBI chr 2:154,792,519...154,892,932
Ensembl chr 2:154,633,322...154,892,932
JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino IAGP MGI PMID:11110696 NCBI chr 5:36,904,718...36,906,023
Ensembl chr 5:36,904,722...36,905,994
JBrowse link
G Ednrb endothelin receptor type B IAGP MGI PMID:8001159 NCBI chr14:104,052,055...104,081,764
Ensembl chr14:104,052,061...104,081,838
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:26113083 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,055,336
JBrowse link
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 IAGP MGI PMID:9256466 NCBI chr19:42,743,629...42,770,013
Ensembl chr19:42,743,544...42,768,417
JBrowse link
G Hps3 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 IAGP MGI PMID:11707070 NCBI chr 3:20,050,109...20,089,478
Ensembl chr 3:20,050,109...20,089,479
JBrowse link
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 IAGP MGI PMID:11836498 NCBI chr 5:112,490,849...112,526,290
Ensembl chr 5:112,490,949...112,526,280
JBrowse link
G Hps5 HPS5, biogenesis of lysosomal organelles complex 2 subunit 2 IAGP MGI PMID:12548288 NCBI chr 7:46,409,890...46,445,501
Ensembl chr 7:46,409,890...46,445,488
JBrowse link
G Hps6 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 IAGP MGI PMID:12548288 NCBI chr19:45,991,917...45,994,612
Ensembl chr19:45,991,947...45,994,612
JBrowse link
G Lyst lysosomal trafficking regulator IAGP MGI PMID:13943454 NCBI chr13:13,764,896...13,953,388
Ensembl chr13:13,764,982...13,953,388
JBrowse link
G Mitf melanogenesis associated transcription factor IAGP MGI PMID:8947051 NCBI chr 6:97,783,966...97,998,321
Ensembl chr 6:97,784,013...97,998,310
JBrowse link
G Slc38a8 solute carrier family 38, member 8 IAGP MGI PMID:37862028 NCBI chr 8:120,206,313...120,228,503
Ensembl chr 8:120,206,341...120,228,437
JBrowse link
G Vps33a VPS33A CORVET/HOPS core subunit IAGP MGI PMID:9585243 NCBI chr 5:123,666,820...123,711,104
Ensembl chr 5:123,666,722...123,711,101
JBrowse link
abnormal choroid melanin granule morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G a nonagouti IAGP MGI PMID:4634048 NCBI chr 2:154,792,519...154,892,932
Ensembl chr 2:154,633,322...154,892,932
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 IAGP MGI PMID:12923531 NCBI chr13:45,075,552...45,155,614
Ensembl chr13:45,075,551...45,155,623
JBrowse link
G Kxd1 KxDL motif containing 1 IAGP MGI PMID:22554196 NCBI chr 8:70,966,046...70,975,830
Ensembl chr 8:70,960,922...70,980,606
JBrowse link
G Lyst lysosomal trafficking regulator IAGP MGI PMID:4634048 NCBI chr13:13,764,896...13,953,388
Ensembl chr13:13,764,982...13,953,388
JBrowse link
G Mlph melanophilin IAGP MGI PMID:4634048 NCBI chr 1:90,842,750...90,878,864
Ensembl chr 1:90,842,807...90,878,864
JBrowse link
G Myo5a myosin VA IAGP MGI PMID:4634048 NCBI chr 9:74,975,183...75,130,970
Ensembl chr 9:74,978,297...75,130,970
JBrowse link
G Oca2 oculocutaneous albinism II IAGP MGI PMID:4634048 NCBI chr 7:55,889,341...56,186,266
Ensembl chr 7:55,889,508...56,186,266
JBrowse link
G Pmel premelanosome protein IAGP MGI PMID:21949658 NCBI chr10:128,531,757...128,555,993
Ensembl chr10:128,540,064...128,556,107
JBrowse link
G Tyr tyrosinase IAGP MGI PMID:4634048 NCBI chr 7:87,073,979...87,142,637
Ensembl chr 7:87,073,979...87,142,720
JBrowse link
G Tyrp1 tyrosinase-related protein 1 IAGP MGI PMID:4634048 NCBI chr 4:80,752,360...80,769,973
Ensembl chr 4:80,752,360...80,769,956
JBrowse link
abnormal choroid melanocyte morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ece1 endothelin converting enzyme 1 IAGP MGI PMID:9449665 NCBI chr 4:137,589,548...137,692,540
Ensembl chr 4:137,589,548...137,692,540
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17090
    vision/eye phenotype 3190
      abnormal eye morphology 3031
        abnormal eye pigmentation 210
          abnormal choroid pigmentation 22
            abnormal choroid melanocyte morphology + 11
Path 2
Term Annotations click to browse term
  mammalian phenotype 17090
    vision/eye phenotype 3190
      abnormal eye morphology 3031
        abnormal uvea morphology 275
          abnormal optic choroid morphology 64
            abnormal choroid pigmentation 22
              abnormal choroid melanocyte morphology + 11
paths to the root