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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal kidney calyx morphology
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Accession:MP:0004195 term browser browse the term
Definition:any structural anomaly of any of the branches of the renal pelvis that surround each renal papilla and collect urine
Synonyms:exact_synonym: abnormal calyx morphology;   abnormal kidney calix morphology;   abnormal renal calyx morphology
 related_synonym: abnormal kidney calicies morphology;   abnormal renal calix morphology
 xref: MA:0000369


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abnormal kidney calyx morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aga aspartylglucosaminidase IAGP MGI PMID:9777961 NCBI chr 8:53,964,718...53,976,457
Ensembl chr 8:53,964,762...53,976,456 		JBrowse link
G Lepr leptin receptor IAGP MGI PMID:5009970 NCBI chr 4:101,574,393...101,676,375
Ensembl chr 4:101,574,601...101,672,549 		JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:8575306 PMID:14603255 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310 		JBrowse link
G Wt1 WT1 transcription factor IAGP MGI PMID:14603255 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961 		JBrowse link
dilated kidney calyx term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme IAGP MGI PMID:8642790 PMID:9153279 NCBI chr11:105,858,774...105,880,790
Ensembl chr11:105,858,771...105,880,790 		JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 IAGP MGI PMID:10811842 PMID:14668204 NCBI chr16:85,590,715...85,600,001
Ensembl chr16:85,590,715...85,600,001 		JBrowse link
G Agtr1a angiotensin II receptor, type 1a IAGP MGI PMID:9466969 NCBI chr13:30,520,339...30,566,850
Ensembl chr13:30,520,424...30,566,850 		JBrowse link
G Agtr1b angiotensin II receptor, type 1b IAGP MGI PMID:9466969 NCBI chr 3:20,368,637...20,421,341
Ensembl chr 3:20,368,637...20,421,341 		JBrowse link
G Aqp2 aquaporin 2 IAGP MGI PMID:3184310 NCBI chr15:99,476,937...99,482,426
Ensembl chr15:99,476,936...99,482,428 		JBrowse link
G Bmp4 bone morphogenetic protein 4 IAGP MGI PMID:10749566 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126 		JBrowse link
G Fgf10 fibroblast growth factor 10 IAGP MGI PMID:11062007 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Ppp3r1 protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I) IAGP MGI PMID:15057312 NCBI chr11:17,109,298...17,150,380
Ensembl chr11:17,109,263...17,150,375 		JBrowse link
G Scarb2 scavenger receptor class B, member 2 IAGP MGI PMID:12620969 NCBI chr 5:92,589,170...92,653,516
Ensembl chr 5:92,589,173...92,654,692 		JBrowse link
Term paths to the root
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Term Annotations click to browse term
  mammalian phenotype 16734
    renal/urinary system phenotype 2078
      abnormal renal/urinary system morphology 1730
        abnormal kidney morphology 1546
          abnormal kidney pelvis morphology 159
            abnormal kidney calyx morphology 13
              dilated kidney calyx 9
paths to the root